Citrus Sinensis ID: 047395

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430--
Protein Sequence
MEMDYVTGFSHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYRRF
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccEEEEccccccccEEEEccccccccccEEEEEEcccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccEEEEEccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEccccccccccccccccccccccccccccccccEEEEEccccccccccEEEEEccccccccEEEEccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccHHHHHHccccccccccccccccccccccHHHHHHHHccccHHHHHHccccccHHHHHHHHHHHHcccccccccHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHEEcccccccccccccccccccccccccccHHccccccccEEcccccccccccccccccccccccccccccccccccccccEEEEccccccccEEEEEEccccccEEEEEEEccccccEEEEEHEcccccccHHHHHHHHHHHHHHHHccccccEEEEEEHEcccccEEEEEEcccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccEEccccccccEEEcccccEEEccccccccccccccHcccccccccEEEEEccccccccccEEEEEEEEEEcccHHHccccccccEEEHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccHHHHHcccHHHHHHHHcccccccccccccccccccccccccccHHHHHcccccHHHHHHHHHHccccccccccHHHHHccHHHHHcccccc
Coil and Loop (DISEMBL)
memdyvtgfshshmdrrptkrprlawenpqahskaqsgmycgqelgnltsfgpsrvhadHASMFVKGLaqngtpqwrnddkdgHYLFALGENLTSRYKILRKIgegtfgqvldcldretgeTVAIKVVRSIKKYREAAMTEIDVLELLKRydrsgsrcvqirnwfDYRNHICIVFEMLGPslydflrknnyrpfpvDLVREIGRQLLECVAFMHDLRlihtdlkpenilfvspeylkipdykvtarsptdvnyykrlpkssaikvidfgstayehqehnyivstrhyrapevilglgwsypcdmwsvGCILIELCSGEALFQTHENLEHLAMMERVlgpipqhmlkrvdkpaeKFVRrgrldwpegatsrESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGllrydpssrltahdalkhpfftrdyyrrf
Flexible Loop (DISEMBL)
memdyvtgfshshmdrrptkRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEgtfgqvldcldretgetvaIKVVRSIKKYREAAMTEIDVLEllkrydrsgsrcvqirnwFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVspeylkipdykvtarsptdvnyykrlpkssAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRrgrldwpegatsresikAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSsrltahdalkhpfftrDYYRRF
Low Complexity Region (SEG)
MEMDYVTGFSHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYRRF
Disordered region (IsUnstruct)
***************************************YCGQELGNLTSFG**RVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY***
Disordered Region (DISOPRED)
*******************************************************************************DKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK***************PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRL****************************VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYR**
Disordered Region (DISEMBL)
*********************PRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYRRF
Disordered Region (DISPRO)
****YV****HSH********PRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEMDYVTGFSHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYRRF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	432	2.2.26 [Sep-21-2011]
P51567	427	Serine/threonine-protein	yes	no	0.981	0.992	0.728	0.0
P51566	467	Serine/threonine-protein	no	no	0.956	0.884	0.692	1e-175
P51568	400	Serine/threonine-protein	no	no	0.886	0.957	0.586	1e-140
Q10156	690	Dual specificity protein	yes	no	0.784	0.491	0.468	7e-94
P49760	499	Dual specificity protein	yes	no	0.775	0.671	0.482	4e-93
O35491	499	Dual specificity protein	yes	no	0.773	0.669	0.481	4e-93
P49762	832	Serine/threonine-protein	no	no	0.780	0.405	0.480	6e-90
Q9HAZ1	481	Dual specificity protein	no	no	0.770	0.692	0.468	5e-89
P49759	484	Dual specificity protein	no	no	0.770	0.688	0.468	9e-89
P22518	483	Dual specificity protein	no	no	0.770	0.689	0.465	5e-88

>sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/427 (72%), Positives = 368/427 (86%), Gaps = 3/427 (0%)

Query: 1   MEMDYVTGFSHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADH 60
           MEM+ V  F H+HMDRRP KR RL W+     +KAQ GM+CGQE+GN++SF  S   +D+
Sbjct: 1   MEMERVHEFPHTHMDRRPRKRARLGWDVLPQATKAQVGMFCGQEIGNISSFASSGAPSDN 60

Query: 61  AS-MFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRET 119
           +S + VKG+A+NG+P WR DDKDGHY+F LG++LT RYKI  K+GEGTFGQVL+C DRE 
Sbjct: 61  SSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDRER 120

Query: 120 GETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG 179
            E VA+K+VR +KKYREAAM EI++L+ L ++D+ G+RCVQIRNWFDYRNHICIVFE LG
Sbjct: 121 KEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLG 180

Query: 180 PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIP 239
            SLYDFLRKNNYR FP+DLVREIG QLLECVAFMHDLR+IHTDLKPENIL VS +Y+KIP
Sbjct: 181 SSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVKIP 240

Query: 240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWS 299
           +YK  +R   DV  YKR+PKSSAIKVIDFGST YE Q+  YIVSTRHYRAPEVILGLGWS
Sbjct: 241 EYK-GSRLQRDV-CYKRVPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLGWS 298

Query: 300 YPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRG 359
           YPCD+WSVGCI++ELC+GEALFQTHENLEHLAMMERVLGP PQ MLK+VD+ +EK+VRRG
Sbjct: 299 YPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLGPFPQQMLKKVDRHSEKYVRRG 358

Query: 360 RLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
           RLDWP+GATSR+S+KAVLKLPRLQNL+MQHVDHSAG LI+++QGLLR+DPS R+TA +AL
Sbjct: 359 RLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGELINMVQGLLRFDPSERITAREAL 418

Query: 420 KHPFFTR 426
           +HPFF R
Sbjct: 419 RHPFFAR 425

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 1

>sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2

 Score =  615 bits (1585), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 295/426 (69%), Positives = 342/426 (80%), Gaps = 13/426 (3%)

Query: 9   FSHSHMDRRPTKRPRLAWENPQAHSKA-------QSGMYCGQELGNLTSFGPSRVHADHA 61
           F H  +D+RP KRPRL W+               Q  +Y G E    +   P+ V+ +  
Sbjct: 25  FPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFA--SGLVPNFVYPN-- 80

Query: 62  SMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGE 121
            MF  GL + G+P WR DDKDGHY+F +G+ LT RY+IL K+GEGTFGQVL+C D +  E
Sbjct: 81  -MFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNKNKE 139

Query: 122 TVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
            VAIKV+RSI KYREAAM EIDVL+ L R+D  GSRCVQIRNWFDYRNHICIVFE LGPS
Sbjct: 140 VVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKLGPS 199

Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           LYDFLRKN+YR FP+DLVRE+GRQLLE VA+MHDLRLIHTDLKPENIL VS EY+KIPDY
Sbjct: 200 LYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKIPDY 259

Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
           K  +R   D +Y+K LPKSSAIK+IDFGST +EHQ+HNYIVSTRHYRAPEVILG+GW+YP
Sbjct: 260 KFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGWNYP 319

Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRG-R 360
           CD+WS+GCIL+ELCSGEALFQTHENLEHLAMMERVLGP+P HM+ R D+ +EK+ RRG +
Sbjct: 320 CDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRRGAK 379

Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
           LDWPEGATSR+S+KAV KLPRL NL+MQHVDHSAG LIDLLQGLLRYDP+ R  A +AL 
Sbjct: 380 LDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKAREALN 439

Query: 421 HPFFTR 426
           HPFFTR
Sbjct: 440 HPFFTR 445

Activator of yeast transcription factor, STE12.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P51568|AFC3_ARATH Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2

 Score =  499 bits (1286), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 244/416 (58%), Positives = 313/416 (75%), Gaps = 33/416 (7%)

Query: 14  MDR-RPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADHASMFVKGLAQNG 72
           MD+ R  KRPR+ W+   A  +A+  +                         +KG   +G
Sbjct: 9   MDKERVRKRPRMTWDEAPAEPEAKRAV-------------------------IKGHGSDG 43

Query: 73  ---TPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR 129
              +P  R+DD+DGHY+F+L +NLT RYKIL K+GEGTFG+VL+C DR+T E VAIK++R
Sbjct: 44  RILSPPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIR 103

Query: 130 SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN 189
           SIKKYR+AAM EIDVL+ L + D+  +RCVQ++NWFDYRNHICIVFE LGPSL+DFL++N
Sbjct: 104 SIKKYRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRN 163

Query: 190 NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
            Y  FP+ LVR+ G QLLE VA+MH+L+L+HTDLKPENIL VS E +K+PD K   RS  
Sbjct: 164 KYSAFPLALVRDFGCQLLESVAYMHELQLVHTDLKPENILLVSSENVKLPDNK---RSAA 220

Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC 309
           +  +++ LPKSSAIK+IDFGST  +++ H+ IV TRHYR+PEVILGLGWSY CD+WS+GC
Sbjct: 221 NETHFRCLPKSSAIKLIDFGSTVCDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGC 280

Query: 310 ILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRG-RLDWPEGAT 368
           IL ELC+GEALFQTH+NLEHLAMMER LGP+P+HM ++  + AEK+ RRG RL+WPEGA 
Sbjct: 281 ILFELCTGEALFQTHDNLEHLAMMERALGPLPEHMTRKASRGAEKYFRRGCRLNWPEGAN 340

Query: 369 SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           SRESI+AV +L RL+++V +HVD++     DLL GLL YDPS RLTA++AL HPFF
Sbjct: 341 SRESIRAVKRLDRLKDMVSKHVDNTRSRFADLLYGLLAYDPSERLTANEALDHPFF 396

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q10156|LKH1_SCHPO Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lkh1 PE=1 SV=3

 Score =  344 bits (883), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 164/350 (46%), Positives = 239/350 (68%), Gaps = 11/350 (3%)

Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA 138
           DD DGHY         +RY ++R +G GTFG+V+ C D+ TG   AIKV R+I KYREA+
Sbjct: 344 DDDDGHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREAS 403

Query: 139 MTEIDVLELLKRYDRSG-SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
           + E+ VL+ +   D +  ++C+Q+R++FDYR HICIV ++ G S++DFL+ NNY PFP+ 
Sbjct: 404 LIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNYIPFPLK 463

Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
            ++ + +QL + VAF+H L L+HTDLKPEN+L VS       +   T R P   NY +++
Sbjct: 464 HIQMLSQQLFKSVAFLHSLGLVHTDLKPENVLLVS-------NASRTIRLPYR-NYSQKV 515

Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
             S  I++IDFGS  +E + H+ +VSTRHYRAPE+ILGLGWSYPCD+WS+GCIL+EL +G
Sbjct: 516 LNSCEIRLIDFGSATFEDEYHSSVVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELFTG 575

Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR-GRLDWPEGATSRESIKAV 376
           +ALFQTHE+ EHL MME++LGP  ++M+ R  + +++F +  G++ +P   T ++SI  +
Sbjct: 576 QALFQTHEDSEHLCMMEKILGPFDRNMISRSSRTSQRFFKSDGKVRYPLSNTPKKSINYL 635

Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             L  L+ +        A  L+DLL+ +  YDP  R+TA +AL HPFFT+
Sbjct: 636 QSLQTLEQIFAVSSPEVA-LLLDLLKKVFVYDPKRRITAKEALWHPFFTQ 684

Protein kinase that may act as a negative regulator of filamentous growth and flocculation. Appears to have a role in normal cell wall and septum formation and in cell seperation. May have antagonistic function in the regulation of beta-glucan distribution between the sites for cell wall and septum assembly.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49760|CLK2_HUMAN Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1

 Score =  342 bits (876), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 169/350 (48%), Positives = 239/350 (68%), Gaps = 15/350 (4%)

Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYREA 137
           DD +GH ++ +G+ L  RY+I+  +GEGTFG+V+ C+D R  G  VA+K++++++KY+EA
Sbjct: 145 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 204

Query: 138 AMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
           A  EI+VLE +   D      CVQ+ +WFDY  H+CI FE+LG S +DFL+ NNY P+P+
Sbjct: 205 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 264

Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
             VR +  QL + V F+HD +L HTDLKPENILFV+       DY++T       +  +R
Sbjct: 265 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS------DYELTYNLEKKRD--ER 316

Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
             KS+A++V+DFGS  ++H+ H+ IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   
Sbjct: 317 SVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 376

Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G  LFQTH+N EHLAMMER+LGPIP  M+++  K  +K+  RGRLDW E  ++   ++  
Sbjct: 377 GFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVREN 434

Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
            K P  + L  +  +H    L DL++ +L Y+P+ RLT  +AL+HPFF R
Sbjct: 435 CK-PLRRYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35491|CLK2_MOUSE Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=1 SV=2

 Score =  342 bits (876), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 168/349 (48%), Positives = 238/349 (68%), Gaps = 15/349 (4%)

Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYREA 137
           DD +GH ++ +G+ L  RY+I+  +GEGTFG+V+ C+D R  G  VA+K++++++KY+EA
Sbjct: 144 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGTQVALKIIKNVEKYKEA 203

Query: 138 AMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
           A  EI+VLE +   D      CVQ+ +WFDY  H+CI FE+LG S +DFL+ NNY P+P+
Sbjct: 204 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 263

Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
             VR +  QL + V F+HD +L HTDLKPENILFV+       DY++T       +  +R
Sbjct: 264 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS------DYELTYNLEKKRD--ER 315

Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
             KS+A++V+DFGS  ++H+ H+ IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   
Sbjct: 316 SVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 375

Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G  LFQTH+N EHLAMMER+LGP+P  M+++  K  +K+  RGRLDW E  ++   ++  
Sbjct: 376 GFTLFQTHDNREHLAMMERILGPVPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVREN 433

Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            K P  + L  +  DH    L DL++ +L Y+P+ RLT  +AL+HPFF 
Sbjct: 434 CK-PLRRYLTSEAEDHHQ--LFDLIENMLEYEPAKRLTLGEALQHPFFA 479

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49762|DOA_DROME Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2

 Score =  331 bits (849), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 169/352 (48%), Positives = 230/352 (65%), Gaps = 15/352 (4%)

Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA 138
           DD DGH ++  G+ L  RYKI+  +GEGTFG+V+   D E    +A+K++++++KYREAA
Sbjct: 461 DDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAA 520

Query: 139 MTEIDVLELLKRYD-RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
             EI+ LE + + D      CV++ +WFDY  H+CIVFEMLG S++DFLR+NNY P+P+D
Sbjct: 521 KLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLD 580

Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
            VR +  QL   V F+HD RL HTDLKPENILFV  +Y    ++K+        N   R 
Sbjct: 581 QVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKI--------NREVRR 632

Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
            K++ +++IDFGS  ++H+ H+ IVSTRHYRAPEVIL LGWS PCD+WS+GCIL EL  G
Sbjct: 633 VKNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLG 692

Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKR---VDKPAEKFVRRGRLDWPEGATSRESIK 374
             LFQTH+N EHLAMMER+LG IP  M +      K   K+   G+LDW E +++   ++
Sbjct: 693 ITLFQTHDNREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYHGKLDWDEKSSAGRYVR 752

Query: 375 AVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
              K P     +    DH    L  L++ +L Y+PSSR+T  +AL HPFF R
Sbjct: 753 DHCK-PLFLCQLSDSEDHCE--LFSLIKKMLEYEPSSRITLGEALHHPFFDR 801

Negative regulator of the copia retrotransposon element of the white (w) gene. In the eye, it is required for normal pigmentation, photoreceptor cell development and for organization of interommatidial bristles. Also essential for embryonic segmentation and differentiation of the nervous system. Functions in the control of alternative splicing by phosphorylating the argine/serine-rich splicing factors, SR proteins.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q9HAZ1|CLK4_HUMAN Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1

 Score =  328 bits (841), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 163/348 (46%), Positives = 238/348 (68%), Gaps = 15/348 (4%)

Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRET-GETVAIKVVRSIKKYREA 137
           DD++GH +   G+ L +RY+I+  +GEG FG+V++C+D    G  VA+K+V+++ +YREA
Sbjct: 141 DDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREA 200

Query: 138 AMTEIDVLELLKRYD-RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
           A +EI VLE L   D  S  RCVQ+  WFD+  H+CIVFE+LG S YDF+++N++ PF +
Sbjct: 201 ARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQI 260

Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
           D +R++  Q+ + + F+H  +L HTDLKPENILFV  +Y+     K  ++   D    +R
Sbjct: 261 DHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYV----VKYNSKMKRD----ER 312

Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
             K++ IKV+DFGS  Y+ + H+ +VSTRHYRAPEVIL LGWS PCD+WS+GCILIE   
Sbjct: 313 TLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 372

Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G  +FQTH++ EHLAMMER+LGPIPQHM+++  K   K+    +LDW E +++   ++  
Sbjct: 373 GFTVFQTHDSKEHLAMMERILGPIPQHMIQKTRK--RKYFHHNQLDWDEHSSAGRYVRRR 430

Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            K   L+  ++ H D     L DL++ +L YDP+ R+T  +AL+HPFF
Sbjct: 431 CKP--LKEFMLCH-DEEHEKLFDLVRRMLEYDPTQRITLDEALQHPFF 475

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49759|CLK1_HUMAN Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2

 Score =  327 bits (839), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 163/348 (46%), Positives = 235/348 (67%), Gaps = 15/348 (4%)

Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETG-ETVAIKVVRSIKKYREA 137
           DD++GH +   G+ L++RY+I+  +GEG FG+V++C+D + G   VA+K+V+++ +Y EA
Sbjct: 143 DDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEA 202

Query: 138 AMTEIDVLELLKRYD-RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
           A +EI VLE L   D  S  RCVQ+  WF++  HICIVFE+LG S YDF+++N + PF +
Sbjct: 203 ARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRL 262

Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
           D +R++  Q+ + V F+H  +L HTDLKPENILFV  +Y +  + K+     T +N    
Sbjct: 263 DHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN---- 318

Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                 IKV+DFGS  Y+ + H+ +VSTRHYRAPEVIL LGWS PCD+WS+GCILIE   
Sbjct: 319 ----PDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 374

Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G  +F TH++ EHLAMMER+LGP+P+HM+++  K   K+    RLDW E +++   +   
Sbjct: 375 GFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRR 432

Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            K P  + ++ Q V+H    L DL+Q +L YDP+ R+T  +ALKHPFF
Sbjct: 433 CK-PLKEFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 477

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates: SRSF1, SRSF3 and PTPN1. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells and adenovirus E1A pre-mRNA.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P22518|CLK1_MOUSE Dual specificity protein kinase CLK1 OS=Mus musculus GN=Clk1 PE=1 SV=2

 Score =  325 bits (832), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 162/348 (46%), Positives = 235/348 (67%), Gaps = 15/348 (4%)

Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETG-ETVAIKVVRSIKKYREA 137
           DD++GH +   G+ L++RY+I+  +GEG FG+V++C+D + G   VA+K+V+++ +Y EA
Sbjct: 142 DDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKVGGRRVAVKIVKNVDRYCEA 201

Query: 138 AMTEIDVLELLKRYD-RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
           A +EI VLE L   D  S  RCVQ+  WF++R HICIVFE+LG S YDF+++N++ PF +
Sbjct: 202 AQSEIQVLEHLNTTDPHSTFRCVQMLEWFEHRGHICIVFELLGLSTYDFIKENSFLPFRM 261

Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
           D +R++  Q+ + V F+H  +L HTDLKPENILFV  +Y +  + K+     T VN    
Sbjct: 262 DHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVKSDYTEAYNPKMKRDERTIVN---- 317

Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                 IKV+DFGS  Y+ + H+ +VSTRHYRAPEVIL LGWS PCD+WS+GCILIE   
Sbjct: 318 ----PDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 373

Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G  +F TH++ EHLAMMER+LGP+P+HM+++  K   ++    RLDW E +++   +   
Sbjct: 374 GFTVFPTHDSREHLAMMERILGPLPKHMIQKTRK--RRYFHHDRLDWDEHSSAGRYVSRR 431

Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            K P  + ++ Q  +H    L DL+  +L YDP+ R+T  +ALKHPFF
Sbjct: 432 CK-PLKEFMLSQDAEHEL--LFDLIGKMLEYDPAKRITLKEALKHPFF 476

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates: SRSF1, SRSF3 and PTPN1. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells and adenovirus E1A pre-mRNA.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	432
255578375	432	afc, putative [Ricinus communis] gi|2235	1.0	1.0	0.840	0.0
225424621	432	PREDICTED: serine/threonine-protein kina	1.0	1.0	0.833	0.0
225456860	435	PREDICTED: serine/threonine-protein kina	0.995	0.988	0.802	0.0
224107741	434	predicted protein [Populus trichocarpa]	0.986	0.981	0.797	0.0
2911280	431	PK12 protein kinase [Nicotiana tabacum]	0.997	1.0	0.787	0.0
357463225	428	Serine/threonine protein kinase AFC2 [Me	0.988	0.997	0.800	0.0
255540473	435	afc, putative [Ricinus communis] gi|2235	0.995	0.988	0.768	0.0
147767048	421	hypothetical protein VITISV_035275 [Viti	0.965	0.990	0.774	0.0
224135977	427	predicted protein [Populus trichocarpa]	0.983	0.995	0.765	0.0
363806778	430	uncharacterized protein LOC100804452 [Gl	0.990	0.995	0.752	0.0

>gi|255578375|ref|XP_002530054.1| afc, putative [Ricinus communis] gi|223530470|gb|EEF32354.1| afc, putative [Ricinus communis]

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/432 (84%), Positives = 397/432 (91%)

Query: 1   MEMDYVTGFSHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADH 60
           MEMDYV+ + H+HMDRRP KRPR AW+ PQAH+KAQSG+Y GQE+GN TS GPSRV  DH
Sbjct: 1   MEMDYVSQYPHNHMDRRPRKRPRFAWDIPQAHTKAQSGLYYGQEVGNGTSIGPSRVLPDH 60

Query: 61  ASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETG 120
           AS+FVKGLAQ G+P WR+DDKDGHY+FALGENLTSRYKI RK+GEGTF QVL+C DRE  
Sbjct: 61  ASLFVKGLAQKGSPPWRDDDKDGHYMFALGENLTSRYKIQRKLGEGTFCQVLECWDRENR 120

Query: 121 ETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP 180
           E VAIKVVRS KKYREAAM EI+VL LL +YDR+GSRCVQIRNWFDYRNHICIVFEMLGP
Sbjct: 121 EMVAIKVVRSTKKYREAAMLEINVLHLLGKYDRNGSRCVQIRNWFDYRNHICIVFEMLGP 180

Query: 181 SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD 240
           SLYDFLRKNNYRPFPVDLVRE+GRQLLECVAFMHDLRLIHTDLKPENILFVSPEY+KIPD
Sbjct: 181 SLYDFLRKNNYRPFPVDLVRELGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYIKIPD 240

Query: 241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSY 300
           YKV + SP +  YYKRLPKSSAIKVIDFGS AY H EHNYIVSTRHYRAPEVILGLGWSY
Sbjct: 241 YKVPSISPAEATYYKRLPKSSAIKVIDFGSAAYGHHEHNYIVSTRHYRAPEVILGLGWSY 300

Query: 301 PCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
           PCDMWSVGCIL+ELCSGEALFQTHENLEHLAMMERVLGP+PQHML+R D+ AEK+VR+GR
Sbjct: 301 PCDMWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQHMLRRADRHAEKYVRKGR 360

Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
           LDWP+ ATSRESIKAV+KLPRLQN+VM HVDHSAG +IDLLQGLLRYDPS+RLTAH+AL+
Sbjct: 361 LDWPDAATSRESIKAVMKLPRLQNIVMLHVDHSAGDIIDLLQGLLRYDPSNRLTAHEALR 420

Query: 421 HPFFTRDYYRRF 432
           HPFFTRD+YRRF
Sbjct: 421 HPFFTRDHYRRF 432

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424621|ref|XP_002285476.1| PREDICTED: serine/threonine-protein kinase AFC2 [Vitis vinifera] gi|296081376|emb|CBI16809.3| unnamed protein product [Vitis vinifera]

 Score =  759 bits (1959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/432 (83%), Positives = 393/432 (90%)

Query: 1   MEMDYVTGFSHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADH 60
           MEM+ VT F H+HMDRRP KRPR AW+ PQ H KAQ G+YCGQE+GN+TS G SRV +D 
Sbjct: 1   MEMECVTEFPHTHMDRRPRKRPRFAWDAPQLHPKAQPGIYCGQEVGNVTSHGTSRVLSDQ 60

Query: 61  ASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETG 120
           AS+FVKGLAQ G+P WR+DDKDGH++FALGENLTSRYKI RKIGEGTFGQVL+C DRET 
Sbjct: 61  ASIFVKGLAQKGSPPWRDDDKDGHFMFALGENLTSRYKIHRKIGEGTFGQVLECWDRETK 120

Query: 121 ETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP 180
           E VAIKVVR IKKYREAAM E++VL+LL +YD+SGSRC QIRNWFDYRNHICIVFEMLGP
Sbjct: 121 EMVAIKVVRGIKKYREAAMIEVEVLQLLGKYDKSGSRCGQIRNWFDYRNHICIVFEMLGP 180

Query: 181 SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD 240
           SLYDFLRKNNYR FPVDLVREIGRQLLECVAFMHDL LIHTDLKPENILFVSPEY+K+ D
Sbjct: 181 SLYDFLRKNNYRSFPVDLVREIGRQLLECVAFMHDLHLIHTDLKPENILFVSPEYVKVSD 240

Query: 241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSY 300
           YKVT RSP D   YK+LP+SSAIKVIDFGSTA+E Q+H+YIVSTRHYRAPEVILGLGWSY
Sbjct: 241 YKVTTRSPKDGICYKKLPRSSAIKVIDFGSTAFECQDHSYIVSTRHYRAPEVILGLGWSY 300

Query: 301 PCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
           PCDMWSVGCIL+ELCSGEALFQTHENLEHLAMMERVLGPIP HMLKRVD+ AEK+VR+GR
Sbjct: 301 PCDMWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPIPPHMLKRVDRHAEKYVRKGR 360

Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
           LDWPEGA SRESIKAV+KLPRL NLVMQHVDHSAG LIDLLQGLLRYDPS+RLTA DAL+
Sbjct: 361 LDWPEGAISRESIKAVMKLPRLPNLVMQHVDHSAGDLIDLLQGLLRYDPSNRLTAQDALR 420

Query: 421 HPFFTRDYYRRF 432
           HPFFTRDY+ RF
Sbjct: 421 HPFFTRDYHSRF 432

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456860|ref|XP_002279764.1| PREDICTED: serine/threonine-protein kinase AFC2 [Vitis vinifera] gi|297733679|emb|CBI14926.3| unnamed protein product [Vitis vinifera]

 Score =  733 bits (1892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/435 (80%), Positives = 390/435 (89%), Gaps = 5/435 (1%)

Query: 1   MEM-DYVTGFSHSHMDRRPTKRPRLAWEN-PQAHSKAQSGMYCGQELGNLTSFGPSRVHA 58
           MEM + VT F H+HMDRRP KRPRL W+  PQA  KAQ GM+CGQE+GN+ SF PS+ H+
Sbjct: 1   MEMVERVTEFPHTHMDRRPRKRPRLGWDVLPQA-PKAQLGMFCGQEVGNVASFAPSKAHS 59

Query: 59  DH--ASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLD 116
           D   +SMFVKG+A+NG+P WR DDKDGHY+FALGENLTSRYKI  K+GEGTFGQVL+C D
Sbjct: 60  DQTTSSMFVKGVARNGSPPWREDDKDGHYIFALGENLTSRYKINSKMGEGTFGQVLECWD 119

Query: 117 RETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE 176
           RE  E VA+K+VR IKKYREAAM EI+VL+ L ++D+ G+RCVQIRNWFDYRNHICIVFE
Sbjct: 120 RERKEMVAVKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE 179

Query: 177 MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYL 236
            LGPSLYDFLRKNNYR FP+DLVREIGRQLLECVAFMHDLRLIHTDLKPENIL VSPEY+
Sbjct: 180 KLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRLIHTDLKPENILLVSPEYV 239

Query: 237 KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL 296
           K+PDYKV++RSP D +Y+KR+PKSSAIKVIDFGST YE Q+ NYIVSTRHYRAPEVILGL
Sbjct: 240 KVPDYKVSSRSPKDGSYFKRVPKSSAIKVIDFGSTTYERQDQNYIVSTRHYRAPEVILGL 299

Query: 297 GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFV 356
           GWSYPCD+WSVGCIL+ELC+GEALFQTHENLEHLAMMERVLGP+PQHMLKRVD+ AEK+V
Sbjct: 300 GWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV 359

Query: 357 RRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAH 416
           RRGRLDWPEGATSRESIKAVLKLPRLQNL+MQHVDHSAG LI LLQGLLRYDPS RLTA 
Sbjct: 360 RRGRLDWPEGATSRESIKAVLKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSDRLTAL 419

Query: 417 DALKHPFFTRDYYRR 431
            AL+HPFFTRD+ RR
Sbjct: 420 GALRHPFFTRDHLRR 434

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107741|ref|XP_002314585.1| predicted protein [Populus trichocarpa] gi|222863625|gb|EEF00756.1| predicted protein [Populus trichocarpa]

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/440 (79%), Positives = 389/440 (88%), Gaps = 14/440 (3%)

Query: 1   MEMDYVTGFSHSHMDRRPTKRPRLA---WE-----NPQAHSKAQSGMYCGQELGNLTSFG 52
           MEM+YV+ F H++MDRRP KRP+LA   W+      P  H+KAQSG+Y GQ +GN TS G
Sbjct: 1   MEMEYVSEFPHNYMDRRPRKRPKLAAAAWDIPPQPQPHTHTKAQSGLYYGQVVGNGTSTG 60

Query: 53  PSRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVL 112
            SR+  DHAS+FVKGLAQ G+P WR DDKDGHY+FALGENLTSRYKI RKIGEGTFGQVL
Sbjct: 61  SSRMLPDHASLFVKGLAQKGSPPWRGDDKDGHYVFALGENLTSRYKIHRKIGEGTFGQVL 120

Query: 113 DCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC 172
           +C DRET E VA+KVVRS KKYREAAM E+DVL+LL +YDR+GSRCVQIRNW DYRNHIC
Sbjct: 121 ECWDRETREMVAVKVVRSTKKYREAAMLEVDVLQLLGKYDRNGSRCVQIRNWLDYRNHIC 180

Query: 173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS 232
           IVFEMLGPSLYDFLRKNNY PFPV+LVRE+GRQLLECVAFMHD+RLIHTDLKPENILFVS
Sbjct: 181 IVFEMLGPSLYDFLRKNNYCPFPVNLVRELGRQLLECVAFMHDMRLIHTDLKPENILFVS 240

Query: 233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEV 292
            EY+KIPDYK    S T+  +YKRLPKSSAIKVIDFGSTAY HQ+H YIVSTRHYRAPEV
Sbjct: 241 SEYIKIPDYK----SHTEGTFYKRLPKSSAIKVIDFGSTAYGHQDHKYIVSTRHYRAPEV 296

Query: 293 ILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPA 352
           ILGLGWSYPCD+WSVGCIL+ELCSGEALFQTHENLEHLAMMERVLGP+PQHMLKRVD  A
Sbjct: 297 ILGLGWSYPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDLQA 356

Query: 353 EKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR 412
           EK+VRRGRLDWP+GA SRESIKA +KLPRLQNLVMQHVDHSAG +IDLLQGLLR+DP+ R
Sbjct: 357 EKYVRRGRLDWPDGAMSRESIKATMKLPRLQNLVMQHVDHSAGDIIDLLQGLLRHDPAIR 416

Query: 413 LTAHDALKHPFFTRDYYRRF 432
           LTAH+AL+HPFFT+  YRRF
Sbjct: 417 LTAHEALRHPFFTK--YRRF 434

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2911280|gb|AAC04324.1| PK12 protein kinase [Nicotiana tabacum]

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/432 (78%), Positives = 383/432 (88%), Gaps = 1/432 (0%)

Query: 1   MEMDYVTGFSHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADH 60
           MEM+YVT +   +MDRRP KRPRL W +P    KAQSG+Y GQE+GN +S+  SR+  DH
Sbjct: 1   MEMEYVTEYPRPYMDRRPKKRPRLDW-DPSHTPKAQSGIYYGQEVGNSSSYVHSRLLPDH 59

Query: 61  ASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETG 120
            S++VKGLAQ G+P  R+DDKDGHY+F LGENLT+RYKIL+KIGEGTFGQVL+C DRE  
Sbjct: 60  DSLYVKGLAQKGSPPRRDDDKDGHYMFELGENLTTRYKILKKIGEGTFGQVLECWDREQK 119

Query: 121 ETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP 180
             VAIK++RSIKKYREAAM E+DVL+LL RYDR G+RCVQ+RNWFDYRNHIC+VFE LGP
Sbjct: 120 GFVAIKIIRSIKKYREAAMVEVDVLQLLGRYDRGGTRCVQLRNWFDYRNHICLVFEKLGP 179

Query: 181 SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD 240
           SL+DFLRKN+YR FPVDLVREIGRQLLECVAFMHD+RLIHTDLKPENILFVS +Y+K+PD
Sbjct: 180 SLFDFLRKNSYRAFPVDLVREIGRQLLECVAFMHDMRLIHTDLKPENILFVSADYIKVPD 239

Query: 241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSY 300
           YK T  S  D ++ KRLPKSSAIKVIDFGSTAYE  +HNYIVSTRHYRAPEVILGLGWSY
Sbjct: 240 YKGTPWSHRDRSFSKRLPKSSAIKVIDFGSTAYERPDHNYIVSTRHYRAPEVILGLGWSY 299

Query: 301 PCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
           PCD+WSVGCILIELCSGEALFQTHENLEHLAMMERVLGP+P  MLKRVD+ AEK+VRRGR
Sbjct: 300 PCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPSQMLKRVDRHAEKYVRRGR 359

Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
           LDWPEGATSRESIK+V+KLPRLQNLVMQHVDHSAG LIDLLQGLLR+DPS R+TAHDAL+
Sbjct: 360 LDWPEGATSRESIKSVMKLPRLQNLVMQHVDHSAGDLIDLLQGLLRFDPSIRMTAHDALR 419

Query: 421 HPFFTRDYYRRF 432
           HPFFT+D YRR 
Sbjct: 420 HPFFTKDQYRRL 431

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463225|ref|XP_003601894.1| Serine/threonine protein kinase AFC2 [Medicago truncatula] gi|355490942|gb|AES72145.1| Serine/threonine protein kinase AFC2 [Medicago truncatula]

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/431 (80%), Positives = 386/431 (89%), Gaps = 4/431 (0%)

Query: 3   MDYVTGFSHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGN-LTSFGPSRVHADHA 61
           MDY T FS   MDRRP KRP+LAWE PQ HSKA SG+YCGQE  +  TS+G  RV  DH 
Sbjct: 1   MDYATEFS---MDRRPRKRPKLAWELPQTHSKAHSGIYCGQEFASATTSYGTLRVLPDHT 57

Query: 62  SMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGE 121
              +KGLA+ G+PQWR+DDKDGHY+FALGENLTSRYKIL KIGEGTFGQVL+C DRET E
Sbjct: 58  GFSIKGLAEKGSPQWRDDDKDGHYVFALGENLTSRYKILNKIGEGTFGQVLECWDRETRE 117

Query: 122 TVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
            VAIKVVRS+KKYREAAM E+DVL+LL +YDR+GSRCVQIRNWFDYRNHICIVFEMLGPS
Sbjct: 118 MVAIKVVRSVKKYREAAMLEVDVLQLLGKYDRNGSRCVQIRNWFDYRNHICIVFEMLGPS 177

Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           LYDFLRKN+YRPFPVDLVRE+GRQLLE VAF+HD+RLIHTDLKPENILF+SPEY+K+PDY
Sbjct: 178 LYDFLRKNSYRPFPVDLVRELGRQLLESVAFVHDMRLIHTDLKPENILFISPEYVKVPDY 237

Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
           KV  RSP +   YKRLPKSSAIKVIDFGST+YEHQ+HNYIVSTRHYRAPEVILGLGW++P
Sbjct: 238 KVMFRSPKEGVSYKRLPKSSAIKVIDFGSTSYEHQDHNYIVSTRHYRAPEVILGLGWNFP 297

Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRL 361
           CD+WS+GCIL+ELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKR D  AEK+VRRGRL
Sbjct: 298 CDIWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRADHAAEKYVRRGRL 357

Query: 362 DWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH 421
           +WPEGA SRESIKAVLKL RL NLVMQHVDHSAG L+DLLQGLLR+DP SR+ AH+AL+H
Sbjct: 358 NWPEGAVSRESIKAVLKLSRLPNLVMQHVDHSAGDLLDLLQGLLRFDPMSRMKAHEALRH 417

Query: 422 PFFTRDYYRRF 432
           PFFT ++Y+R+
Sbjct: 418 PFFTGEHYQRY 428

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540473|ref|XP_002511301.1| afc, putative [Ricinus communis] gi|223550416|gb|EEF51903.1| afc, putative [Ricinus communis]

 Score =  706 bits (1822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/436 (76%), Positives = 380/436 (87%), Gaps = 6/436 (1%)

Query: 1   MEMDYVTGFSHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADH 60
           MEM+ VT F   H+DRRP KR RL W+ P    KAQ GM+C QE+GN+ S+  S  ++DH
Sbjct: 1   MEMERVTEFPLPHLDRRPRKRARLGWDVPLV-PKAQVGMFCAQEVGNVASYASSGANSDH 59

Query: 61  ----ASMFVKGLA-QNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCL 115
               +S+F+KG+A +NG+P WR DDKDGHY+FALGENLTSRYKI  K+GEGTFGQVL+C 
Sbjct: 60  TTTSSSVFLKGVAPRNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECW 119

Query: 116 DRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVF 175
           DRE  E VAIK+VR IKKYREAAM EIDVL+ L ++D+ G+RCVQIRNWFDYRNHICIVF
Sbjct: 120 DRERKEMVAIKIVRGIKKYREAAMIEIDVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVF 179

Query: 176 EMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEY 235
           E LGPSLYDFLRKNNYR FP+DLVREIGRQLLEC+AFMHDL LIHTDLKPENIL VSP+Y
Sbjct: 180 EKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLHLIHTDLKPENILLVSPDY 239

Query: 236 LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG 295
           +K+PDYK + RSP D +Y+KR+PKSSA+KVIDFGST YE Q+ NYIVSTRHYRAPEVILG
Sbjct: 240 VKVPDYKGSTRSPKDSSYFKRVPKSSAVKVIDFGSTTYERQDQNYIVSTRHYRAPEVILG 299

Query: 296 LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKF 355
           LGWSYPCD+WSVGCIL+ELC+GEALFQTHENLEHLAMMERVLGP+PQHMLKR+D+ AEK+
Sbjct: 300 LGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRIDRHAEKY 359

Query: 356 VRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTA 415
           VRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG LI LLQGLLRYDPS RLTA
Sbjct: 360 VRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGDLIHLLQGLLRYDPSDRLTA 419

Query: 416 HDALKHPFFTRDYYRR 431
            +AL+HPFF RD+ RR
Sbjct: 420 REALRHPFFARDHLRR 435

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767048|emb|CAN67679.1| hypothetical protein VITISV_035275 [Vitis vinifera]

 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/434 (77%), Positives = 374/434 (86%), Gaps = 17/434 (3%)

Query: 1   MEM-DYVTGFSHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHAD 59
           MEM + VT F H+HMDRRP KRPRL W+      KAQ GM+CGQE+GN+ SF PS+ H+D
Sbjct: 1   MEMVERVTEFPHTHMDRRPRKRPRLGWDVLPQAPKAQLGMFCGQEVGNVASFAPSKAHSD 60

Query: 60  H--ASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDR 117
              +SMFVKG+A+NG+P WR DDKDGHY+FALGENLTSRYKI  K+GEGTFGQVL+C DR
Sbjct: 61  QTTSSMFVKGVARNGSPPWREDDKDGHYIFALGENLTSRYKINSKMGEGTFGQVLECWDR 120

Query: 118 ETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEM 177
           E  E VA+K+VR IKKYREAAM EI+VL+ L ++D+ G+RCVQIRNWFDYRNHICIVFE 
Sbjct: 121 ERKEMVAVKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK 180

Query: 178 LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLK 237
           LGPSLYDFLRKNNYR FP+DLVREIGRQLLECVAFMHDLRLIHTDLKPENIL VSPEY+K
Sbjct: 181 LGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRLIHTDLKPENILLVSPEYVK 240

Query: 238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG 297
           +PDYKV++RSP D              VIDFGST YE Q+ NYIVSTRHYRAPEVILGLG
Sbjct: 241 VPDYKVSSRSPKD--------------VIDFGSTTYERQDQNYIVSTRHYRAPEVILGLG 286

Query: 298 WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
           WSYPCD+WSVGCIL+ELC+GEALFQTHENLEHLAMMERVLGP+PQHMLKRVD+ AEK+VR
Sbjct: 287 WSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR 346

Query: 358 RGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHD 417
           RGRLDWPEGATSRESIKAVLKLPRLQNL+MQHVDHSAG LI LLQGLLRYDPS RLTA  
Sbjct: 347 RGRLDWPEGATSRESIKAVLKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSDRLTAJG 406

Query: 418 ALKHPFFTRDYYRR 431
           AL+HPFFTRD+ RR
Sbjct: 407 ALRHPFFTRDHLRR 420

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135977|ref|XP_002322208.1| predicted protein [Populus trichocarpa] gi|222869204|gb|EEF06335.1| predicted protein [Populus trichocarpa]

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/431 (76%), Positives = 375/431 (87%), Gaps = 6/431 (1%)

Query: 1   MEMDYVTGFSHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADH 60
           MEM++VT F  +H+DR P KRPR  W+ PQA    Q G +CGQE+GN+ S+  S   +DH
Sbjct: 1   MEMEHVTIFPITHLDR-PRKRPRFGWDVPQA----QVGNFCGQEVGNVASYASSGAISDH 55

Query: 61  -ASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRET 119
            +S+FVKG+AQNG+P WR DDKDGHY+FALG+NLTSRYKI  K+GEGTFGQVL+C DRE 
Sbjct: 56  TSSLFVKGVAQNGSPPWREDDKDGHYMFALGDNLTSRYKIHNKMGEGTFGQVLECWDRER 115

Query: 120 GETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG 179
            E VAIK+VR IKKY+EAAM EI+VL+ L ++D+ G+RCVQIRNWFDYRNHICIVFE LG
Sbjct: 116 KEMVAIKIVRGIKKYKEAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLG 175

Query: 180 PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIP 239
           PSLYDFLRKNNYR FP+D VREIGRQLLECVAFMHDL +IHTDLKPENIL VS +Y+K+P
Sbjct: 176 PSLYDFLRKNNYRSFPIDHVREIGRQLLECVAFMHDLHMIHTDLKPENILLVSSDYVKVP 235

Query: 240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWS 299
           DYK + RSP D +YYKR+PKSSAIKVIDFGST YE Q+ NYIVSTRHYRAPEVILGLGWS
Sbjct: 236 DYKNSTRSPKDSSYYKRVPKSSAIKVIDFGSTTYERQDQNYIVSTRHYRAPEVILGLGWS 295

Query: 300 YPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRG 359
           YPCD+WSVGCIL+ELC+GEALFQTHENLEHLAMMERVLGP+PQ+MLKRVD+ AEKFVRRG
Sbjct: 296 YPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPMPQNMLKRVDRHAEKFVRRG 355

Query: 360 RLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
           RLDWPEGA SRESIKAVLKLPRLQNLVMQHVDHSAG LI LLQGLLRYDP  RLTA +AL
Sbjct: 356 RLDWPEGAASRESIKAVLKLPRLQNLVMQHVDHSAGDLIHLLQGLLRYDPMDRLTAREAL 415

Query: 420 KHPFFTRDYYR 430
           +HPFF +D+ R
Sbjct: 416 RHPFFAKDHRR 426

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806778|ref|NP_001242280.1| uncharacterized protein LOC100804452 [Glycine max] gi|255635653|gb|ACU18176.1| unknown [Glycine max]

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/433 (75%), Positives = 379/433 (87%), Gaps = 5/433 (1%)

Query: 1   MEMDYVTGFSHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADH 60
           MEM+ V  F H+HMDRRP KR RL W+ P+   KAQ G++CGQ++G ++SF PSR  +++
Sbjct: 1   MEMERVFEFPHTHMDRRPRKRARLGWDIPEV-PKAQVGLFCGQDVGTISSFAPSRGPSEN 59

Query: 61  --ASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRE 118
             +S+FVK +A+NG+P WR+DDKDGHY+FALGENLTSRYKI  K+GEGTFGQVL+C DRE
Sbjct: 60  TTSSLFVKPVARNGSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRE 119

Query: 119 TGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML 178
             E VA+K+VR IKKYREAAM EI+VL+ L ++D+ G+RCVQIRNWFDYRNHICIV E L
Sbjct: 120 RKEMVAVKIVRGIKKYREAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVLEKL 179

Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           GPSLYDFLRKNNYR FP+DLVREIGRQLLEC+AFMHDLR+IHTDLKPENIL VSPEY+K+
Sbjct: 180 GPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLRMIHTDLKPENILLVSPEYVKV 239

Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
           PDYK ++R  +  +Y+KR+PKSSAIKVIDFGST YE ++ NYIVSTRHYRAPEVILGLGW
Sbjct: 240 PDYKSSSR--SPSSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGLGW 297

Query: 299 SYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
           SYPCD+WSVGCIL+ELC+G ALFQTHENLEHLAMMERVLGP+PQ MLKRVD+ AEK+VRR
Sbjct: 298 SYPCDIWSVGCILVELCTGGALFQTHENLEHLAMMERVLGPLPQPMLKRVDRHAEKYVRR 357

Query: 359 GRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDA 418
           GRLDWPEGATSRESIKAV+ LPRLQNLVMQHVDHSAG LI LLQGLLRYDPS RLTA +A
Sbjct: 358 GRLDWPEGATSRESIKAVMNLPRLQNLVMQHVDHSAGDLIHLLQGLLRYDPSERLTAKEA 417

Query: 419 LKHPFFTRDYYRR 431
           L+H FF RD +RR
Sbjct: 418 LRHSFFMRDQFRR 430

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	432
TAIR|locus:2121984	427	FC2 "FUS3-complementing gene 2	0.979	0.990	0.733	1.1e-174
TAIR|locus:2084006	467	FC1 "FUS3-complementing gene 1	0.956	0.884	0.694	9.3e-162
TAIR|locus:2125622	400	AME3 [Arabidopsis thaliana (ta	0.849	0.917	0.630	1.4e-128
ZFIN|ZDB-GENE-060929-1126	500	clk2b "CDC-like kinase 2b" [Da	0.780	0.674	0.456	5e-89
UNIPROTKB|F1RLJ5	500	CLK2 "Uncharacterized protein"	0.775	0.67	0.482	5.9e-89
UNIPROTKB|E1B9Q2	500	CLK2 "Uncharacterized protein"	0.775	0.67	0.482	7.5e-89
UNIPROTKB|F1P919	612	CLK2 "Uncharacterized protein"	0.775	0.547	0.482	7.5e-89
UNIPROTKB|B1AVT0	497	CLK2 "Dual-specificity protein	0.775	0.674	0.482	7.5e-89
UNIPROTKB|P49760	499	CLK2 "Dual specificity protein	0.775	0.671	0.482	7.5e-89
MGI|MGI:1098669	499	Clk2 "CDC-like kinase 2" [Mus	0.770	0.667	0.482	9.6e-89

TAIR|locus:2121984 FC2 "FUS3-complementing gene 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1697 (602.4 bits), Expect = 1.1e-174, P = 1.1e-174
 Identities = 314/428 (73%), Positives = 371/428 (86%)

Query:     1 MEMDYVTGFSHSHMDRRPTKRPRLAWEN-PQAHSKAQSGMYCGQELGNLTSFGPSRVHAD 59
             MEM+ V  F H+HMDRRP KR RL W+  PQA +KAQ GM+CGQE+GN++SF  S   +D
Sbjct:     1 MEMERVHEFPHTHMDRRPRKRARLGWDVLPQA-TKAQVGMFCGQEIGNISSFASSGAPSD 59

Query:    60 HAS-MFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRE 118
             ++S + VKG+A+NG+P WR DDKDGHY+F LG++LT RYKI  K+GEGTFGQVL+C DRE
Sbjct:    60 NSSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDRE 119

Query:   119 TGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML 178
               E VA+K+VR +KKYREAAM EI++L+ L ++D+ G+RCVQIRNWFDYRNHICIVFE L
Sbjct:   120 RKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKL 179

Query:   179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
             G SLYDFLRKNNYR FP+DLVREIG QLLECVAFMHDLR+IHTDLKPENIL VS +Y+KI
Sbjct:   180 GSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVKI 239

Query:   239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
             P+YK  +R   DV  YKR+PKSSAIKVIDFGST YE Q+  YIVSTRHYRAPEVILGLGW
Sbjct:   240 PEYK-GSRLQRDV-CYKRVPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLGW 297

Query:   299 SYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
             SYPCD+WSVGCI++ELC+GEALFQTHENLEHLAMMERVLGP PQ MLK+VD+ +EK+VRR
Sbjct:   298 SYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLGPFPQQMLKKVDRHSEKYVRR 357

Query:   359 GRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDA 418
             GRLDWP+GATSR+S+KAVLKLPRLQNL+MQHVDHSAG LI+++QGLLR+DPS R+TA +A
Sbjct:   358 GRLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGELINMVQGLLRFDPSERITAREA 417

Query:   419 LKHPFFTR 426
             L+HPFF R
Sbjct:   418 LRHPFFAR 425

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006397 "mRNA processing" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

TAIR|locus:2084006 FC1 "FUS3-complementing gene 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1575 (559.5 bits), Expect = 9.3e-162, P = 9.3e-162
 Identities = 296/426 (69%), Positives = 344/426 (80%)

Query:     9 FSHSHMDRRPTKRPRLAWEN-------PQAHSKAQSGMYCGQELGNLTSFGPSRVHADHA 61
             F H  +D+RP KRPRL W+        P   +  Q  +Y G E  +     P+ V+ +  
Sbjct:    25 FPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFAS--GLVPNFVYPN-- 80

Query:    62 SMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGE 121
              MF  GL + G+P WR DDKDGHY+F +G+ LT RY+IL K+GEGTFGQVL+C D +  E
Sbjct:    81 -MFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNKNKE 139

Query:   122 TVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
              VAIKV+RSI KYREAAM EIDVL+ L R+D  GSRCVQIRNWFDYRNHICIVFE LGPS
Sbjct:   140 VVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKLGPS 199

Query:   182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
             LYDFLRKN+YR FP+DLVRE+GRQLLE VA+MHDLRLIHTDLKPENIL VS EY+KIPDY
Sbjct:   200 LYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKIPDY 259

Query:   242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
             K  +R   D +Y+K LPKSSAIK+IDFGST +EHQ+HNYIVSTRHYRAPEVILG+GW+YP
Sbjct:   260 KFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGWNYP 319

Query:   302 CDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRG-R 360
             CD+WS+GCIL+ELCSGEALFQTHENLEHLAMMERVLGP+P HM+ R D+ +EK+ RRG +
Sbjct:   320 CDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRRGAK 379

Query:   361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
             LDWPEGATSR+S+KAV KLPRL NL+MQHVDHSAG LIDLLQGLLRYDP+ R  A +AL 
Sbjct:   380 LDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKAREALN 439

Query:   421 HPFFTR 426
             HPFFTR
Sbjct:   440 HPFFTR 445

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045727 "positive regulation of translation" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2125622 AME3 [Arabidopsis thaliana (taxid:3702)]

 Score = 1262 (449.3 bits), Expect = 1.4e-128, P = 1.4e-128
 Identities = 237/376 (63%), Positives = 301/376 (80%)

Query:    53 PSRVHADHASMFVKGLAQNG---TPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFG 109
             P+   A  A   +KG   +G   +P  R+DD+DGHY+F+L +NLT RYKIL K+GEGTFG
Sbjct:    26 PAEPEAKRA--VIKGHGSDGRILSPPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFG 83

Query:   110 QVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN 169
             +VL+C DR+T E VAIK++RSIKKYR+AAM EIDVL+ L + D+  +RCVQ++NWFDYRN
Sbjct:    84 RVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRN 143

Query:   170 HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL 229
             HICIVFE LGPSL+DFL++N Y  FP+ LVR+ G QLLE VA+MH+L+L+HTDLKPENIL
Sbjct:   144 HICIVFEKLGPSLFDFLKRNKYSAFPLALVRDFGCQLLESVAYMHELQLVHTDLKPENIL 203

Query:   230 FVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 289
              VS E +K+PD K   RS  +  +++ LPKSSAIK+IDFGST  +++ H+ IV TRHYR+
Sbjct:   204 LVSSENVKLPDNK---RSAANETHFRCLPKSSAIKLIDFGSTVCDNRIHHSIVQTRHYRS 260

Query:   290 PEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVD 349
             PEVILGLGWSY CD+WS+GCIL ELC+GEALFQTH+NLEHLAMMER LGP+P+HM ++  
Sbjct:   261 PEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAMMERALGPLPEHMTRKAS 320

Query:   350 KPAEKFVRRG-RLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD 408
             + AEK+ RRG RL+WPEGA SRESI+AV +L RL+++V +HVD++     DLL GLL YD
Sbjct:   321 RGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLKDMVSKHVDNTRSRFADLLYGLLAYD 380

Query:   409 PSSRLTAHDALKHPFF 424
             PS RLTA++AL HPFF
Sbjct:   381 PSERLTANEALDHPFF 396

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

ZFIN|ZDB-GENE-060929-1126 clk2b "CDC-like kinase 2b" [Danio rerio (taxid:7955)]

 Score = 867 (310.3 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
 Identities = 161/353 (45%), Positives = 240/353 (67%)

Query:    76 WR-NDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKK 133
             W   DD++GH ++  G+ L  RY+I + +GEGTFG+V++C+D + G + +A+K++++++K
Sbjct:   145 WAVKDDEEGHLIYRAGDVLQDRYEITQTLGEGTFGKVVECVDHQRGGSRIALKIIKNVEK 204

Query:   134 YREAAMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYR 192
             Y+EAA  EI+VLE + + D      CVQ+ +WFDY  H+C+ FE+LG S +DF+++NNY 
Sbjct:   205 YKEAARLEINVLEKINQRDPENKNLCVQMLDWFDYHGHMCLSFELLGLSTFDFMKENNYL 264

Query:   193 PFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
             P+ +  VR +  Q+   V F+HD +L HTDLKPENILFVS +Y  +  Y   A    D  
Sbjct:   265 PYSISQVRHMAYQICLAVKFLHDNKLTHTDLKPENILFVSSDYSVL--YN--AEKKRD-- 318

Query:   253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
               +R   S+A++++DFGS  ++H+ H+ IVSTRHYRAPEVIL LGWS PCD+WS+GCIL 
Sbjct:   319 --ERSVNSTAVRIVDFGSATFDHEHHSSIVSTRHYRAPEVILELGWSQPCDVWSIGCILF 376

Query:   313 ELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRES 372
             E   G  L+QTH+N EHLAMMER+ GP+P  M+++  K  +K+  RGRLDW E  ++   
Sbjct:   377 EFYCGYTLYQTHDNREHLAMMERIHGPVPSRMIRKTRK--QKYFYRGRLDWDESTSAGRY 434

Query:   373 IKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
             ++   + P  + ++ +  DH   +  DLL+GLL Y+P  RL+   AL+HPFF+
Sbjct:   435 VRENCR-PLRRYMLCESEDHHQFF--DLLEGLLEYEPEQRLSLSAALRHPFFS 484

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1RLJ5 CLK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
 Identities = 169/350 (48%), Positives = 239/350 (68%)

Query:    79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYREA 137
             DD +GH ++ +G+ L  RY+I+  +GEGTFG+V+ C+D R  G  VA+K++++++KY+EA
Sbjct:   145 DDAEGHLIYHVGDWLQERYEIISTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 204

Query:   138 AMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
             A  EI+VLE +   D      CVQ+ +WFDY  H+CI FE+LG S +DFL+ NNY P+P+
Sbjct:   205 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 264

Query:   197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
               VR +  QL + V F+HD +L HTDLKPENILFV+       DY++T     +    +R
Sbjct:   265 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS------DYELTYN--LEKKRDER 316

Query:   257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
               KS+A++V+DFGS  ++H+ H+ IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   
Sbjct:   317 SVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 376

Query:   317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
             G  LFQTH+N EHLAMMER+LGPIP  M+++  K  +K+  RGRLDW E  ++   ++  
Sbjct:   377 GFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVREN 434

Query:   377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
              K P  + L  +  +H    L DL++ +L Y+P+ RLT  +AL+HPFF R
Sbjct:   435 CK-PLRRYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1B9Q2 CLK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
 Identities = 169/350 (48%), Positives = 239/350 (68%)

Query:    79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYREA 137
             DD +GH ++ +G+ L  RY+I+  +GEGTFG+V+ C+D R  G  VA+K++++++KY+EA
Sbjct:   145 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 204

Query:   138 AMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
             A  EI+VLE +   D      CVQ+ +WFDY  H+CI FE+LG S +DFL+ NNY P+P+
Sbjct:   205 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 264

Query:   197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
               VR +  QL + V F+HD +L HTDLKPENILFV+       DY++T     +    +R
Sbjct:   265 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS------DYELTYN--LEKKRDER 316

Query:   257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
               KS+A++V+DFGS  ++H+ H+ IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   
Sbjct:   317 SVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 376

Query:   317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
             G  LFQTH+N EHLAMMER+LGPIP  M+++  K  +K+  RGRLDW E  ++   ++  
Sbjct:   377 GFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVREN 434

Query:   377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
              K P  + L  +  +H    L DL++ +L Y+P+ RLT  +AL+HPFF R
Sbjct:   435 CK-PLRRYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1P919 CLK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
 Identities = 169/350 (48%), Positives = 239/350 (68%)

Query:    79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYREA 137
             DD +GH ++ +G+ L  RY+I+  +GEGTFG+V+ C+D R  G  VA+K++++++KY+EA
Sbjct:   257 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 316

Query:   138 AMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
             A  EI+VLE +   D      CVQ+ +WFDY  H+CI FE+LG S +DFL+ NNY P+P+
Sbjct:   317 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 376

Query:   197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
               VR +  QL + V F+HD +L HTDLKPENILFV+       DY++T     +    +R
Sbjct:   377 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS------DYELTYN--LEKKRDER 428

Query:   257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
               KS+A++V+DFGS  ++H+ H+ IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   
Sbjct:   429 SVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 488

Query:   317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
             G  LFQTH+N EHLAMMER+LGPIP  M+++  K  +K+  RGRLDW E  ++   ++  
Sbjct:   489 GFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVREN 546

Query:   377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
              K P  + L  +  +H    L DL++ +L Y+P+ RLT  +AL+HPFF R
Sbjct:   547 CK-PLRRYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 593

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|B1AVT0 CLK2 "Dual-specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
 Identities = 169/350 (48%), Positives = 239/350 (68%)

Query:    79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYREA 137
             DD +GH ++ +G+ L  RY+I+  +GEGTFG+V+ C+D R  G  VA+K++++++KY+EA
Sbjct:   143 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 202

Query:   138 AMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
             A  EI+VLE +   D      CVQ+ +WFDY  H+CI FE+LG S +DFL+ NNY P+P+
Sbjct:   203 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 262

Query:   197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
               VR +  QL + V F+HD +L HTDLKPENILFV+       DY++T     +    +R
Sbjct:   263 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS------DYELTYN--LEKKRDER 314

Query:   257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
               KS+A++V+DFGS  ++H+ H+ IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   
Sbjct:   315 SVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 374

Query:   317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
             G  LFQTH+N EHLAMMER+LGPIP  M+++  K  +K+  RGRLDW E  ++   ++  
Sbjct:   375 GFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVREN 432

Query:   377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
              K P  + L  +  +H    L DL++ +L Y+P+ RLT  +AL+HPFF R
Sbjct:   433 CK-PLRRYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 479

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P49760 CLK2 "Dual specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
 Identities = 169/350 (48%), Positives = 239/350 (68%)

Query:    79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYREA 137
             DD +GH ++ +G+ L  RY+I+  +GEGTFG+V+ C+D R  G  VA+K++++++KY+EA
Sbjct:   145 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 204

Query:   138 AMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
             A  EI+VLE +   D      CVQ+ +WFDY  H+CI FE+LG S +DFL+ NNY P+P+
Sbjct:   205 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 264

Query:   197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
               VR +  QL + V F+HD +L HTDLKPENILFV+       DY++T     +    +R
Sbjct:   265 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS------DYELTYN--LEKKRDER 316

Query:   257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
               KS+A++V+DFGS  ++H+ H+ IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   
Sbjct:   317 SVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 376

Query:   317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
             G  LFQTH+N EHLAMMER+LGPIP  M+++  K  +K+  RGRLDW E  ++   ++  
Sbjct:   377 GFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVREN 434

Query:   377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
              K P  + L  +  +H    L DL++ +L Y+P+ RLT  +AL+HPFF R
Sbjct:   435 CK-PLRRYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0005524 "ATP binding" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IDA

GO:0010212 "response to ionizing radiation" evidence=IMP

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0045721 "negative regulation of gluconeogenesis" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=ISS

MGI|MGI:1098669 Clk2 "CDC-like kinase 2" [Mus musculus (taxid:10090)]

 Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
 Identities = 168/348 (48%), Positives = 238/348 (68%)

Query:    79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREA 137
             DD +GH ++ +G+ L  RY+I+  +GEGTFG+V+ C+D   G T VA+K++++++KY+EA
Sbjct:   144 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGTQVALKIIKNVEKYKEA 203

Query:   138 AMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
             A  EI+VLE +   D      CVQ+ +WFDY  H+CI FE+LG S +DFL+ NNY P+P+
Sbjct:   204 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 263

Query:   197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
               VR +  QL + V F+HD +L HTDLKPENILFV+       DY++T     +    +R
Sbjct:   264 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS------DYELTYN--LEKKRDER 315

Query:   257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
               KS+A++V+DFGS  ++H+ H+ IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   
Sbjct:   316 SVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 375

Query:   317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
             G  LFQTH+N EHLAMMER+LGP+P  M+++  K  +K+  RGRLDW E  ++   ++  
Sbjct:   376 GFTLFQTHDNREHLAMMERILGPVPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVREN 433

Query:   377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
              K P  + L  +  DH    L DL++ +L Y+P+ RLT  +AL+HPFF
Sbjct:   434 CK-PLRRYLTSEAEDHHQ--LFDLIENMLEYEPAKRLTLGEALQHPFF 478

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0032526 "response to retinoic acid" evidence=IDA

GO:0042221 "response to chemical stimulus" evidence=IDA

GO:0043484 "regulation of RNA splicing" evidence=ISO

GO:0045721 "negative regulation of gluconeogenesis" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P51567	AFC2_ARATH	2, ., 7, ., 1, 2, ., 1	0.7283	0.9814	0.9929	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.12.1	0.979
3rd Layer	2.7.12	0.983
3rd Layer	2.7.11	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	432
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-75
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-64
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	2e-61
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	8e-56
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	5e-54
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-53
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-52
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	7e-50
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-43
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-42
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-41
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	4e-40
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-40
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-39
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-39
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-38
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-38
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-38
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	5e-37
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	6e-37
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-36
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-35
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-35
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-34
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-34
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	7e-34
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	7e-34
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-33
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-33
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	6e-33
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-32
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-32
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	7e-32
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-31
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-31
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	4e-31
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-30
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	3e-30
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-30
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-29
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-29
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	7e-29
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-29
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-28
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-28
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-27
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-27
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-27
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-27
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	5e-27
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	6e-27
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-26
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	3e-26
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	3e-26
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	7e-26
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-25
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	5e-25
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	5e-25
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	9e-25
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-24
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	7e-24
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	8e-24
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	5e-23
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-22
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-22
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-21
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-21
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-21
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	7e-21
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	8e-21
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	8e-21
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-20
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-20
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-19
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	1e-19
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-19
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	3e-19
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	3e-19
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	4e-19
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-19
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	3e-18
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	5e-18
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-17
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-17
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	8e-17
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	8e-17
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-16
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-16
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-16
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-16
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-16
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	5e-16
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	6e-16
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-15
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-15
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-15
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	4e-15
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	5e-15
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	6e-15
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-14
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	1e-14
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	1e-14
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-14
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-14
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-14
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	3e-14
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	6e-14
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	7e-14
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-13
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-13
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	2e-13
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-13
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	3e-13
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-13
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	7e-13
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-12
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-12
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-12
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-12
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-12
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-12
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-12
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-12
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-12
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-12
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-12
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-12
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	4e-12
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	4e-12
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	6e-12
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	9e-12
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-11
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-11
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	1e-11
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-11
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-11
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-11
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-11
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	4e-11
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-11
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	4e-11
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	6e-11
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	8e-11
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	8e-11
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	9e-11
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-10
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-10
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-10
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	2e-10
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-10
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	2e-10
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	3e-10
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	4e-10
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	4e-10
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	4e-10
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	4e-10
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	6e-10
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	8e-10
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	8e-10
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	8e-10
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-09
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	2e-09
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-09
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-09
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	2e-09
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-09
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-09
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	3e-09
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-09
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	5e-09
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	5e-09
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	6e-09
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	6e-09
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	8e-09
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	8e-09
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	8e-09
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	9e-09
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-08
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	1e-08
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-08
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-08
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-08
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-08
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-08
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	3e-08
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	5e-08
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	8e-08
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	1e-07
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	1e-07
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-07
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-07
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	3e-07
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	3e-07
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	3e-07
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-07
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-07
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	3e-07
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	4e-07
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	5e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	5e-07
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	7e-07
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	8e-07
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	9e-07
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	9e-07
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-06
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	1e-06
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	1e-06
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	1e-06
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-06
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-06
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-06
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-06
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-06
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	3e-06
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	3e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-06
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	4e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	5e-06
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	5e-06
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	8e-06
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	9e-06
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-05
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-05
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-05
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-05
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	3e-05
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	4e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-05
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	4e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	5e-05
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-04
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	1e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-04
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-04
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	3e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	3e-04
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	5e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	6e-04
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	8e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	0.001
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	0.002
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	0.002
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	0.002
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.002
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	0.002
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	0.003
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	0.003

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  236 bits (604), Expect = 1e-75
 Identities = 99/333 (29%), Positives = 144/333 (43%), Gaps = 84/333 (25%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRS 154
           Y+IL K+GEG+FG+V    D++TG+ VAIKV++   IKK RE  + EI +L+ LK     
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLK----- 55

Query: 155 GSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               V++ + F+  + + +V E   G  L+D L+K        D  R   RQ+L  + ++
Sbjct: 56  HPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKR--GRLSEDEARFYLRQILSALEYL 113

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKPENIL     ++K+                            DFG    
Sbjct: 114 HSKGIVHRDLKPENILLDEDGHVKL---------------------------ADFGLARQ 146

Query: 274 EHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
                     V T  Y APEV+LG G+    D+WS+G IL EL +G+  F   + L    
Sbjct: 147 LDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLL--E 204

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
           + +++  P P                      PE   S E                    
Sbjct: 205 LFKKIGKPKPP------------------FPPPEWDISPE-------------------- 226

Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  DL++ LL  DP  RLTA +AL+HPFF
Sbjct: 227 -----AKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  207 bits (530), Expect = 1e-64
 Identities = 92/336 (27%), Positives = 142/336 (42%), Gaps = 84/336 (25%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYDR 153
           Y++LRK+G G+FG V     + TG+ VA+K+++      K  + A  EI +L  L     
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRL----- 55

Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
           S    V++ + F+ ++H+ +V E      L+D+L +    P   D  ++I  Q+L  + +
Sbjct: 56  SHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGG--PLSEDEAKKIALQILRGLEY 113

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS-- 270
           +H   +IH DLKPENIL      +KI                            DFG   
Sbjct: 114 LHSNGIIHRDLKPENILLDENGVVKI---------------------------ADFGLAK 146

Query: 271 TAYEHQEHNY-IVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
              +        V T  Y APEV+L G G+    D+WS+G IL EL +G+  F     L+
Sbjct: 147 KLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILD 206

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
            L ++ R+LGP                      D P+ ++  E                 
Sbjct: 207 QLQLIRRILGPPL------------------EFDEPKWSSGSEE---------------- 232

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                     DL++  L  DPS R TA + L+HP+F
Sbjct: 233 --------AKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score =  206 bits (525), Expect = 2e-61
 Identities = 125/356 (35%), Positives = 194/356 (54%), Gaps = 30/356 (8%)

Query: 81  KDGHYLFALGENL---TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA 137
           ++GH+   LGE++   T R+KIL  +GEGTFG+V++  DR+  E  A+K+VR++ KY   
Sbjct: 112 EEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRD 171

Query: 138 AMTEIDVLELLKRYDRSGS-RCVQIRNWF-DYRNHICIVFEMLGPSLYDFLRKNNYRPFP 195
           A  EI  +E +++ D +     ++I+ +F +   H+CIV    GP L D++ K+   PF 
Sbjct: 172 AKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHG--PFS 229

Query: 196 VDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 254
              + +I  Q    + + H +L L+HTDLKPENIL  + + +  P   VT R+       
Sbjct: 230 HRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDP---VTNRALP----- 281

Query: 255 KRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
              P    +++ D G    E      IVSTRHYR+PEV+LGLGW Y  DMWS+GCI+ EL
Sbjct: 282 ---PDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYEL 338

Query: 315 CSGEALFQTHENLEHLAMMERVLGPIPQHMLKR--VDKPAEKFVRRGRLDWPEGATSRES 372
            +G+ L+ TH+NLEHL +ME+ LG +P     R   ++    +   G+L      T  + 
Sbjct: 339 YTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQL---RPCTDPKH 395

Query: 373 IKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
           +  + +   ++ ++   +      L DL+ GLL YD   RL A     HP+  + Y
Sbjct: 396 LARIARARPVREVIRDDL------LCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY 445

Length = 467

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  185 bits (473), Expect = 8e-56
 Identities = 106/340 (31%), Positives = 163/340 (47%), Gaps = 69/340 (20%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR--EAAMT--EIDVLELLKRYD 152
           YK+++++G+GTFG V    ++ETGE VAIK  +  KK+   E  M   E+  L  L  + 
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIK--KMKKKFYSWEECMNLREVKSLRKLNEHP 58

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                 V+++  F   + +  VFE +  +LY  ++    +PF   ++R I  Q+L+ +A 
Sbjct: 59  N----IVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAH 114

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDY----KVTARSPTDVNYYKRLPKSSAIKVIDF 268
           +H     H DLKPEN+L   PE +KI D+    ++ +R P     Y              
Sbjct: 115 IHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-----Y-------------- 155

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHENL 327
             T Y        VSTR YRAPE++L     S P D+W++GCI+ EL +   LF     +
Sbjct: 156 --TDY--------VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEI 205

Query: 328 EHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           + L  +  VLG P  Q                   DWPEG   + + K   + P+     
Sbjct: 206 DQLYKICSVLGTPTKQ-------------------DWPEGY--KLASKLGFRFPQFAPTS 244

Query: 387 MQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +  +  + S    IDL++ +LR+DP  R TA  AL+HP+F
Sbjct: 245 LHQLIPNASPE-AIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  181 bits (461), Expect = 5e-54
 Identities = 111/343 (32%), Positives = 158/343 (46%), Gaps = 70/343 (20%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR---EAAMTEIDVLELLKRYD 152
           RYKIL +IGEG  G V    DRETGETVA+K V   +        A+ EI  L+  +   
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQH-- 58

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                 V++ + F + +   +V E +   L + LR +  RP P   V+   R LL+ VA+
Sbjct: 59  ---PYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLR-DEERPLPEAQVKSYMRMLLKGVAY 114

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           MH   ++H DLKP N+L  +   LKI D+ +            RL               
Sbjct: 115 MHANGIMHRDLKPANLLISADGVLKIADFGLA-----------RLFSEE-------EPRL 156

Query: 273 YEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
           Y HQ     V+TR YRAPE++ G   +    D+W+VGCI  EL +G  LF    ++E LA
Sbjct: 157 YSHQ-----VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA 211

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM---- 387
           ++ R LG            P E+        WP           +  LP    +      
Sbjct: 212 IVFRTLG-----------TPNEE-------TWPG----------LTSLPDYNKITFPESK 243

Query: 388 -----QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                +    ++   +DLL+GLL YDPS RL+A +AL+HP+FT
Sbjct: 244 PIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  180 bits (458), Expect = 1e-53
 Identities = 111/339 (32%), Positives = 160/339 (47%), Gaps = 67/339 (19%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA------AMTEIDVLELLKR 150
           Y+ L KIGEGT+G V    D+ TGE VAIK    IK   E+      A+ EI +L+ L  
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIK---KIKLRFESEGIPKTALREIKLLKELNH 57

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                   +++ + F ++  + +VFE +   LY  ++    R  P  L++    QLL+ +
Sbjct: 58  -----PNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGL 111

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
           AF H   ++H DLKPEN+L  +   LK+ D+ + ARS                    FGS
Sbjct: 112 AFCHSHGILHRDLKPENLLINTEGVLKLADFGL-ARS--------------------FGS 150

Query: 271 --TAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENL 327
               Y H      V TR YRAPE++LG  G+S P D+WSVGCI  EL S   LF     +
Sbjct: 151 PVRPYTHY-----VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI 205

Query: 328 EHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           + L  + R LG P P+                    WP+  +   + K     P+   + 
Sbjct: 206 DQLFKIFRTLGTPDPEV-------------------WPKFTSLARNYK--FSFPKKAGMP 244

Query: 387 MQHVDHSAGY-LIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +  +  +A    +DLL  +L YDP  R+TA  AL HP+F
Sbjct: 245 LPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  177 bits (451), Expect = 1e-52
 Identities = 103/338 (30%), Positives = 159/338 (47%), Gaps = 66/338 (19%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKRYD 152
           Y+ L K+GEGT+G V    D++TGE VA+K +R +    E     A+ EI +L+ LK   
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIR-LDNEEEGIPSTALREISLLKELKH-- 57

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                 V++ +       + +VFE     L  +L      P   +L++ I  QLL  +A+
Sbjct: 58  ---PNIVKLLDVIHTERKLYLVFEYCDMDLKKYL-DKRPGPLSPNLIKSIMYQLLRGLAY 113

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-ST 271
            H  R++H DLKP+NIL                     +N      +   +K+ DFG + 
Sbjct: 114 CHSHRILHRDLKPQNIL---------------------IN------RDGVLKLADFGLAR 146

Query: 272 AYEHQEHNYI--VSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           A+      Y   V T  YRAPE++LG   +S   D+WSVGCI  E+ +G+ LF     ++
Sbjct: 147 AFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID 206

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--V 386
            L  + ++LG            P E+        WP G T     K        ++L  V
Sbjct: 207 QLFKIFQILG-----------TPTEE-------SWP-GVTKLPDYKPTFPKFPPKDLEKV 247

Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +  +D      IDLL  +L+Y+P+ R++A +ALKHP+F
Sbjct: 248 LPRLDPEG---IDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  170 bits (433), Expect = 7e-50
 Identities = 99/336 (29%), Positives = 159/336 (47%), Gaps = 56/336 (16%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK---VVRSIKKYREAAMTEIDVLELLKRYD 152
           +Y++L  +GEG +G VL C ++ TGE VAIK        +  ++ A+ E+ VL  L+  +
Sbjct: 2   KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHEN 61

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                 V ++  F  +  + +VFE +  +L + L  +     P D VR    QLL+ +A+
Sbjct: 62  -----IVNLKEAFRRKGRLYLVFEYVERTLLELLEASPG-GLPPDAVRSYIWQLLQAIAY 115

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKV--TARSPTDVNYYKRLPKSSAIKVIDFGS 270
            H   +IH D+KPENIL      LK+ D+      R+                       
Sbjct: 116 CHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL----------------- 158

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSY--PCDMWSVGCILIELCSGEALFQTHENLE 328
           T Y        V+TR YRAPE+++G   +Y  P D+W++GCI+ EL  GE LF    +++
Sbjct: 159 TDY--------VATRWYRAPELLVG-DTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID 209

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
            L ++++ LGP+P    +          R   + +PE  +  ES++      R    V  
Sbjct: 210 QLYLIQKCLGPLPPSHQELFSSNP----RFAGVAFPE-PSQPESLER-----RYPGKV-- 257

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                +   +D L+  LR DP  RLT  + L+HP+F
Sbjct: 258 -----SSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  151 bits (383), Expect = 2e-43
 Identities = 71/219 (32%), Positives = 102/219 (46%), Gaps = 39/219 (17%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           +GEG FG V    D++TG+ VAIK+++        E  + EI++L+ L          V+
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN-----HPNIVK 55

Query: 161 IRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
           +   F+  NH+ +V E   G SL D L++N       D +  I  Q+LE + ++H   +I
Sbjct: 56  LYGVFEDENHLYLVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGII 114

Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--- 276
           H DLKPENIL  S                              +K+ DFG +        
Sbjct: 115 HRDLKPENILLDSDNGK--------------------------VKLADFGLSKLLTSDKS 148

Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIEL 314
               IV T  Y APEV+LG G +S   D+WS+G IL EL
Sbjct: 149 LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  150 bits (380), Expect = 3e-42
 Identities = 101/346 (29%), Positives = 155/346 (44%), Gaps = 77/346 (22%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKRYD 152
           Y+ + +IGEGT+GQV    +++TGE VA+K +R ++  +E     A+ EI +L+ L+  +
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIR-MENEKEGFPITAIREIKLLQKLRHPN 59

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
               + +        +  I +VFE +   L   L     + F    ++   +QLLE + +
Sbjct: 60  IVRLKEIVTSK---GKGSIYMVFEYMDHDLTGLLDSPEVK-FTESQIKCYMKQLLEGLQY 115

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H   ++H D+K  NIL  +   LK+ D+   AR      Y KR       +VI      
Sbjct: 116 LHSNGILHRDIKGSNILINNDGVLKLADFG-LARP-----YTKRNSADYTNRVI------ 163

Query: 273 YEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
                      T  YR PE++LG   +    DMWSVGCIL EL  G+ +FQ    LE L 
Sbjct: 164 -----------TLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLE 212

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL------ 385
            +  + G            P ++       +WP           V KLP  +NL      
Sbjct: 213 KIFELCGS-----------PTDE-------NWPG----------VSKLPWFENLKPKKPY 244

Query: 386 ------VMQHV-DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                   +H+ D SA   +DLL  LL  DP  R++A  AL+H +F
Sbjct: 245 KRRLREFFKHLIDPSA---LDLLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  148 bits (376), Expect = 1e-41
 Identities = 102/346 (29%), Positives = 151/346 (43%), Gaps = 82/346 (23%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA-MTEIDVLELLKR----- 150
           YKIL KIGEGTF +VL    R+TG+  AIK     K ++    +  +  ++ L+R     
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGKYYAIK--CMKKHFKSLEQVNNLREIQALRRLSPHP 58

Query: 151 ---------YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE 201
                    +DR   R             + +VFE++  +LY+ + K   RP P   V+ 
Sbjct: 59  NILRLIEVLFDRKTGR-------------LALVFELMDMNLYELI-KGRKRPLPEKRVKS 104

Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
              QLL+ +  MH   + H D+KPENIL                             K  
Sbjct: 105 YMYQLLKSLDHMHRNGIFHRDIKPENILI----------------------------KDD 136

Query: 262 AIKVIDFGS--TAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGE 318
            +K+ DFGS    Y    +   +STR YRAPE +L  G +    D+W+VGC+  E+ S  
Sbjct: 137 ILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLF 196

Query: 319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
            LF     L+ +A +  VLG     +LK+      +  R    ++P         K    
Sbjct: 197 PLFPGTNELDQIAKIHDVLGTPDAEVLKK-----FRKSRHMNYNFPS--------KKGTG 243

Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           L +L    + +        +DLL+ LL YDP  R+TA  AL+HP+F
Sbjct: 244 LRKL----LPNASAEG---LDLLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  145 bits (367), Expect = 4e-40
 Identities = 97/339 (28%), Positives = 151/339 (44%), Gaps = 62/339 (18%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA------AMTEIDVLELLK 149
           RY+  +K+GEGT+  V    D+ETG  VAIK ++  ++          A+ EI +L+ LK
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                    + + + F ++++I +VFE +   L   ++  +    P D ++      L  
Sbjct: 61  H-----PNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPAD-IKSYMLMTLRG 114

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   ++H DLKP N+L  S   LK+ D+ + ARS                    FG
Sbjct: 115 LEYLHSNWILHRDLKPNNLLIASDGVLKLADFGL-ARS--------------------FG 153

Query: 270 S--TAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHEN 326
           S      HQ     V TR YRAPE++ G   +    DMWSVGCI  EL           +
Sbjct: 154 SPNRKMTHQ-----VVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD 208

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           ++ L  +   LG            P E+       +WP G TS          P     +
Sbjct: 209 IDQLGKIFEALG-----------TPTEE-------NWP-GVTSLPDYVEFKPFPPTP--L 247

Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            Q    ++   +DLLQ LL  +P+ R+TA  AL+HP+F+
Sbjct: 248 KQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  144 bits (366), Expect = 4e-40
 Identities = 94/346 (27%), Positives = 149/346 (43%), Gaps = 77/346 (22%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKRYD 152
           Y+ L +IGEG +G V    D  TG  VA+K VR +    E    + + EI +L+ L+ ++
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVR-VPLSEEGIPLSTLREIALLKQLESFE 59

Query: 153 RSGSRCVQIR----NWFDYRN-HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
                 V++          R   + +VFE +   L  +L K      P + ++++ RQLL
Sbjct: 60  HP--NIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLL 117

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             V F+H  R++H DLKP+NIL  S   +KI D+ +                    ++  
Sbjct: 118 RGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLA-------------------RIYS 158

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
           F            +V T  YRAPEV+L   ++ P DMWSVGCI  EL     LF+     
Sbjct: 159 FEMALTS------VVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA 212

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGA---------TSRESIKAVLK 378
           + L  +  V+G            P+E        +WP             +  S K+   
Sbjct: 213 DQLDKIFDVIG-----------LPSE-------EEWPRNVSLPRSSFPSYTPRSFKS--- 251

Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                   +  +        DLL+ +L ++P  R++A +AL+HP+F
Sbjct: 252 -------FVPEICEEGL---DLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  143 bits (363), Expect = 1e-39
 Identities = 100/342 (29%), Positives = 151/342 (44%), Gaps = 69/342 (20%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA----AMTEIDVLELLKRYD 152
           Y+ L +I EGT+G V    D++TGE VA+K ++ ++K +E     ++ EI++L  LK   
Sbjct: 7   YEKLNRIEEGTYGVVYRARDKKTGEIVALKKLK-MEKEKEGFPITSLREINIL--LKLQH 63

Query: 153 RSGSRCVQIRNWF--DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
            +    V ++        + I +V E +   L   + +   +PF    V+ +  QLL  V
Sbjct: 64  PN---IVTVKEVVVGSNLDKIYMVMEYVEHDLKSLM-ETMKQPFLQSEVKCLMLQLLSGV 119

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
           A +HD  ++H DLK  N+L                           L     +K+ DFG 
Sbjct: 120 AHLHDNWILHRDLKTSNLL---------------------------LNNRGILKICDFGL 152

Query: 270 STAYEHQEHNY--IVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHEN 326
           +  Y      Y  +V T  YRAPE++LG   +S   DMWSVGCI  EL + + LF     
Sbjct: 153 AREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE 212

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           ++ L             + K +  P EK        WP G +     K         N +
Sbjct: 213 IDQL-----------NKIFKLLGTPTEK-------IWP-GFSELPGAKKKTFTKYPYNQL 253

Query: 387 MQHVDHS----AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            +          G+  DLL  LL YDP+ R++A DALKHP+F
Sbjct: 254 RKKFPALSLSDNGF--DLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  143 bits (363), Expect = 3e-39
 Identities = 88/361 (24%), Positives = 150/361 (41%), Gaps = 101/361 (27%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-------KK-YREAAMTEIDVLEL 147
           RY++L+ IG G +G V   +D+ TG  VAIK + ++       K+  RE        ++L
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILRE--------IKL 52

Query: 148 LKRYDRSGSRC---VQIRNWF-----DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
           L+       R    + + +       +  N + IV E++   L+  ++       P  L 
Sbjct: 53  LRHL-----RHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKS------PQPLT 101

Query: 200 REIGR----QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
            +  +    Q+L  + ++H   +IH DLKP NIL                     VN   
Sbjct: 102 DDHIQYFLYQILRGLKYLHSANVIHRDLKPSNIL---------------------VN--- 137

Query: 256 RLPKSSAIKVIDFG--STAYEHQEHNYI----VSTRHYRAPEVILGL-GWSYPCDMWSVG 308
               +  +K+ DFG        ++        V TR YRAPE++L    ++   D+WSVG
Sbjct: 138 ---SNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVG 194

Query: 309 CILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKP-AEKFVR----RGRLDW 363
           CI  EL + + LF   + ++ L ++  VLG   +  LK +    A  +++    + +   
Sbjct: 195 CIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPL 254

Query: 364 PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
            +                    +       A   IDLL+ +L +DP  R+TA +AL HP+
Sbjct: 255 SK--------------------LFPGASPEA---IDLLEKMLVFDPKKRITADEALAHPY 291

Query: 424 F 424
            
Sbjct: 292 L 292

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score =  140 bits (356), Expect = 1e-38
 Identities = 107/341 (31%), Positives = 169/341 (49%), Gaps = 68/341 (19%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRS-----IKKYREAAMTEIDVLELLK 149
           +Y+ L KIGEG++G V  C +RETG+ VAIK  V S     IKK    A+ EI +L+ LK
Sbjct: 2   KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKK---IALREIRMLKQLK 58

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                    V +   F  +  + +VFE    ++ + L KN  R  P  L+++I  Q L+ 
Sbjct: 59  H-----PNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQA 112

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           V F H    IH D+KPENIL                           + K   IK+ DFG
Sbjct: 113 VNFCHKHNCIHRDVKPENIL---------------------------ITKQGQIKLCDFG 145

Query: 270 ----STAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTH 324
                T       +Y V+TR YRAPE+++G   +  P D+W++GC+  EL +G+ L+   
Sbjct: 146 FARILTGPGDDYTDY-VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGK 204

Query: 325 ENLEHLAMMERVLGP-IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
            +++ L ++ + LG  IP+H  +++    + F  +G L  PE   +RE +++  K P + 
Sbjct: 205 SDVDQLYLIRKTLGDLIPRH--QQIFSTNQFF--KG-LSIPE-PETREPLES--KFPNIS 256

Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +             +  L+G L+ DP+ RL+  + L+HP+F
Sbjct: 257 SPA-----------LSFLKGCLQMDPTERLSCEELLEHPYF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  140 bits (355), Expect = 1e-38
 Identities = 97/335 (28%), Positives = 153/335 (45%), Gaps = 59/335 (17%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRS 154
           +K L K+GEGT+  V    +R TGE VA+K +   + +     A+ EI +++ LK     
Sbjct: 2   FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH---- 57

Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFM 213
               V++ +     N + +VFE +   L  ++  +        + V+    QLL+ +AF 
Sbjct: 58  -ENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFC 116

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H+ R++H DLKP+N+L      LK+ D+               L ++  I V  F +   
Sbjct: 117 HENRVLHRDLKPQNLLINKRGELKLADFG--------------LARAFGIPVNTFSNE-- 160

Query: 274 EHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                   V T  YRAP+V+LG   +S   D+WSVGCI+ E+ +G  LF    N + L  
Sbjct: 161 --------VVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLK 212

Query: 333 MERVLGPIPQHMLKRVDKPAE---KFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
           + R++G   +     + +  E    F R    D                   LQ L    
Sbjct: 213 IFRIMGTPTESTWPGISQLPEYKPTFPRYPPQD-------------------LQQL---- 249

Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
             H+    IDLL  LL+ +P  R++AHDAL+HP+F
Sbjct: 250 FPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  139 bits (352), Expect = 3e-38
 Identities = 102/336 (30%), Positives = 147/336 (43%), Gaps = 67/336 (19%)

Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +      V
Sbjct: 5   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN--IV 62

Query: 160 QIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
           ++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  R++
Sbjct: 63  KLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVL 122

Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST-------- 271
           H DLKP+N+L                           +    AIK+ DFG          
Sbjct: 123 HRDLKPQNLL---------------------------INTEGAIKLADFGLARAFGVPVR 155

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
            Y H+     V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L
Sbjct: 156 TYTHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 210

Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQ 388
             + R LG            P E         WP G TS    K        Q+   V+ 
Sbjct: 211 FRIFRTLG-----------TPDEVV-------WP-GVTSLPDYKPSFPKWARQDFSKVVP 251

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            +D       DLL  +L YDP+ R++A  AL HPFF
Sbjct: 252 PLDEDG---RDLLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score =  136 bits (343), Expect = 5e-37
 Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 53/335 (15%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           +++++L  +GEG +G VL C  +ET E VAIK  +  ++  E   T +  L++L+   + 
Sbjct: 1   NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE 60

Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
               V+++  F  R  + +VFE +  ++ + L +      P + VR    QL++ + + H
Sbjct: 61  N--IVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPP-EKVRSYIYQLIKAIHWCH 117

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
              ++H D+KPEN+L    + LK+ D+                          F     E
Sbjct: 118 KNDIVHRDIKPENLLISHNDVLKLCDF-------------------------GFARNLSE 152

Query: 275 HQEHNYI--VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
               NY   V+TR YR+PE++LG  +    DMWSVGCIL EL  G+ LF     ++ L  
Sbjct: 153 GSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFT 212

Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL---QNLVMQH 389
           +++VLGP+P   +K        F    R                L+ P +   Q+L  ++
Sbjct: 213 IQKVLGPLPAEQMKL-------FYSNPRF-------------HGLRFPAVNHPQSLERRY 252

Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +   +G L+DL++ LL+ +P+ R      L HP F
Sbjct: 253 LGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  135 bits (343), Expect = 6e-37
 Identities = 103/337 (30%), Positives = 157/337 (46%), Gaps = 63/337 (18%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA----AMTEIDVLELLKRYD 152
           Y+ + KIGEGT+G V    D+ TGE VA+K +R ++   E     A+ EI +L+ L    
Sbjct: 1   YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIR-LETEDEGVPSTAIREISLLKELNH-- 57

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                 V++ +     N + +VFE L   L  ++  +        L++    QLL+ +A+
Sbjct: 58  ---PNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAY 114

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG--S 270
            H  R++H DLKP+N+L      LK+ D+ + AR+                    FG   
Sbjct: 115 CHSHRVLHRDLKPQNLLIDREGALKLADFGL-ARA--------------------FGVPV 153

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
             Y H+     V T  YRAPE++LG   +S P D+WS+GCI  E+ +   LF     ++ 
Sbjct: 154 RTYTHE-----VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ 208

Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VM 387
           L  + R LG            P E         WP G TS    K        Q+L  V+
Sbjct: 209 LFRIFRTLG-----------TPDEDV-------WP-GVTSLPDYKPTFPKWARQDLSKVV 249

Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            ++D      +DLL  +L YDP+ R++A  AL+HP+F
Sbjct: 250 PNLDEDG---LDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  136 bits (345), Expect = 1e-36
 Identities = 101/355 (28%), Positives = 169/355 (47%), Gaps = 76/355 (21%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV-----------RSIKKYREAAM 139
           +++  +Y+IL+K+G+G +G V   +DR T E VA+K +           R+   +RE   
Sbjct: 3   KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRT---FRE--- 56

Query: 140 TEIDVLELLKRYDRSGSRCVQIRNWFDYRNH--ICIVFEMLGPSLYDFLRKNNYRPFPVD 197
             I  L+ L  +       V++ N     N   I +VFE +   L+  +R N        
Sbjct: 57  --IMFLQELGDHPN----IVKLLNVIKAENDKDIYLVFEYMETDLHAVIRAN-------- 102

Query: 198 LVREIGR-----QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
           ++ ++ +     QLL+ + ++H   +IH DLKP NIL  S   +K+ D+ + ARS +++ 
Sbjct: 103 ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGL-ARSLSELE 161

Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCIL 311
                P            T Y        V+TR YRAPE++LG    +   DMWSVGCIL
Sbjct: 162 ENPENPV----------LTDY--------VATRWYRAPEILLGSTRYTKGVDMWSVGCIL 203

Query: 312 IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRE 371
            E+  G+ LF     L  L   E+++  I          P+ + +    +  P  AT  +
Sbjct: 204 GEMLLGKPLFPGTSTLNQL---EKIIEVIG--------PPSAEDIE--SIKSPFAATMLD 250

Query: 372 SIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           S+ +  + P  +  ++      A   +DLL+ LL ++P+ RLTA +AL+HP+  +
Sbjct: 251 SLPSRPRKPLDE--LLPKASDDA---LDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  132 bits (333), Expect = 2e-35
 Identities = 105/345 (30%), Positives = 152/345 (44%), Gaps = 70/345 (20%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR---EAAMTEIDVLELLKRYDR 153
           Y+ L KIGEGT+G+V    D+ TG+ VA+K  R           A+ EI +L++L     
Sbjct: 3   YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQML----- 57

Query: 154 SGSRCVQIRNWFDYRN--------HICIVFEMLGPSLYDFL---RKNNYRPFPVDLVREI 202
             S  + I    D  +         + +VFE L   L  F+    +   RP P   ++  
Sbjct: 58  --SESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSF 115

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILF-VSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
             QLL+ VA  H   ++H DLKP+N+L       LKI D                L ++ 
Sbjct: 116 MYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLG--------------LGRAF 161

Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEAL 320
           +I V      +Y H+     + T  YRAPEV+LG   +S P D+WSVGCI  E+   + L
Sbjct: 162 SIPV-----KSYTHE-----IVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPL 211

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRE-SIKAVLKL 379
           F     L+ L  + ++LG            P E+        WP  +  R+       K 
Sbjct: 212 FPGDSELQQLLHIFKLLG-----------TPTEQV-------WPGVSKLRDWHEFPQWKP 253

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
             L   V           +DLLQ +LRYDP+ R++A  AL HP+F
Sbjct: 254 QDLSRAVPDLSPEG----LDLLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  133 bits (336), Expect = 2e-35
 Identities = 96/359 (26%), Positives = 149/359 (41%), Gaps = 87/359 (24%)

Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
           + SRYK +  IG G +G V   +D  +G+ VAIK +              DV  L KR  
Sbjct: 3   VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHA----------FDVPTLAKRTL 52

Query: 153 RSGSRCVQIRNWFDYRNHICI----------------VFEMLGPSLYDFLRKNNYRPFPV 196
           R     ++I   F + N I I                V +++   L+  +  +  +P   
Sbjct: 53  RE----LKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSD--QPLTE 106

Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY---KVTARSPTDVNY 253
           + +R    QLL  + ++H   +IH DLKP N+L      L+I D+   +  + SPT+  Y
Sbjct: 107 EHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKY 166

Query: 254 YKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILI 312
           +                T Y        V+TR YRAPE++L L  ++   DMWSVGCI  
Sbjct: 167 FM---------------TEY--------VATRWYRAPELLLSLPEYTTAIDMWSVGCIFA 203

Query: 313 ELCSGEALFQTHENLEHLAMMERVLGPIPQHMLK-----RVDKPAEKFVRRGRLDWPEGA 367
           E+     LF     +  L ++  VLG   + +L      RV K  +   R+  + W    
Sbjct: 204 EMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPW---- 259

Query: 368 TSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                           + +       A   +DLL  +L++DP  R+T   AL+HPF  +
Sbjct: 260 ----------------SKIFPKASPEA---LDLLSQMLQFDPEERITVEQALQHPFLAQ 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score =  130 bits (329), Expect = 1e-34
 Identities = 87/346 (25%), Positives = 143/346 (41%), Gaps = 56/346 (16%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLK 149
              Y+IL K+GEGTFG+V      +TG  VA+K +  +   ++     A+ EI +L+ LK
Sbjct: 7   LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKI-LMHNEKDGFPITALREIKILKKLK 65

Query: 150 R----------YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
                       +R              R  + +V   +   L   L   + +      +
Sbjct: 66  HPNVVPLIDMAVERPD-------KSKRKRGSVYMVTPYMDHDLSGLLENPSVK-LTESQI 117

Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
           +    QLLE + ++H+  ++H D+K  NIL  +   LKI D+ + AR      Y    P 
Sbjct: 118 KCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGL-AR-----PYDGPPPN 171

Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGE 318
                    G      +  N +V TR YR PE++LG   ++   D+W +GC+  E+ +  
Sbjct: 172 PK------GGGGGGTRKYTNLVV-TRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRR 224

Query: 319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
            + Q   +++ L ++ ++ G   +                    WP G  S    + V  
Sbjct: 225 PILQGKSDIDQLHLIFKLCGTPTEE------------------TWP-GWRSLPGCEGVHS 265

Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  + +         +DLL  LL  DP  RLTA DAL+HP+F
Sbjct: 266 FTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  128 bits (325), Expect = 1e-34
 Identities = 85/352 (24%), Positives = 134/352 (38%), Gaps = 115/352 (32%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLK--- 149
            +     +G G+FG V   LD++TGE +A+K V      ++  EA   EI +L  L+   
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60

Query: 150 --RY---DRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIG 203
             RY   +R            + +N + I  E + G SL   L+K  +   P  ++R+  
Sbjct: 61  IVRYYGSERD-----------EEKNTLNIFLEYVSGGSLSSLLKK--FGKLPEPVIRKYT 107

Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
           RQ+LE +A++H   ++H D+K  NIL                           +     +
Sbjct: 108 RQILEGLAYLHSNGIVHRDIKGANIL---------------------------VDSDGVV 140

Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIELCSG 317
           K+ DFG  A    +      T   R      APEVI G  +    D+WS+GC +IE+ +G
Sbjct: 141 KLADFG-CAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATG 199

Query: 318 EALFQTHENLEHLAMMERVLG-----PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRES 372
           +  +   E    +A + ++        IP+H+                    E A     
Sbjct: 200 KPPW--SELGNPMAALYKIGSSGEPPEIPEHL-------------------SEEA----- 233

Query: 373 IKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                                     D L+  LR DP  R TA + L+HPF 
Sbjct: 234 -------------------------KDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  126 bits (320), Expect = 7e-34
 Identities = 88/331 (26%), Positives = 135/331 (40%), Gaps = 83/331 (25%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYDRSG 155
           ++IL KIG+G FG+V     + TG+ VAIKV++   K+ +E  + EI +L+  K      
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH----- 56

Query: 156 SRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V+    +  ++ + IV E   G SL D L K+  +      +  + ++LL+ + ++H
Sbjct: 57  PNIVKYYGSYLKKDELWIVMEFCSGGSLKDLL-KSTNQTLTESQIAYVCKELLKGLEYLH 115

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STAY 273
              +IH D+K  NIL  S       D +V                    K+IDFG S   
Sbjct: 116 SNGIIHRDIKAANILLTS-------DGEV--------------------KLIDFGLSAQL 148

Query: 274 EH-QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
              +  N +V T ++ APEVI G  + Y  D+WS+G   IEL  G+  +   E     A+
Sbjct: 149 SDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPY--SELPPMKAL 206

Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
            +      P                   L  PE  +  +  K  LK              
Sbjct: 207 FKIATNGPP------------------GLRNPEKWS--DEFKDFLKK------------- 233

Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                       L+ +P  R TA   LKHPF
Sbjct: 234 -----------CLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  127 bits (322), Expect = 7e-34
 Identities = 101/343 (29%), Positives = 152/343 (44%), Gaps = 74/343 (21%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y  + KIGEGT+G V    +++TG+ VA+K +R   +      T I  + LLK       
Sbjct: 2   YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNI 61

Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSL---YDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            C+Q  +     + + ++FE L   L    D L K  Y     +LV+    Q+L+ + F 
Sbjct: 62  VCLQ--DVLMQESRLYLIFEFLSMDLKKYLDSLPKGQY--MDAELVKSYLYQILQGILFC 117

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST-- 271
           H  R++H DLKP+N+L                           +     IK+ DFG    
Sbjct: 118 HSRRVLHRDLKPQNLL---------------------------IDNKGVIKLADFGLARA 150

Query: 272 ------AYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTH 324
                  Y H+     V T  YRAPEV+LG   +S P D+WS+G I  E+ + + LF   
Sbjct: 151 FGIPVRVYTHE-----VVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL---KLPR 381
             ++ L  + R+LG            P E         WP G TS    K      K   
Sbjct: 206 SEIDQLFRIFRILG-----------TPTE-------DVWP-GVTSLPDYKNTFPKWKKGS 246

Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           L++ V +++D      +DLL+ +L YDP+ R++A  AL HP+F
Sbjct: 247 LRSAV-KNLDEDG---LDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  129 bits (323), Expect = 2e-33
 Identities = 89/339 (26%), Positives = 137/339 (40%), Gaps = 71/339 (20%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLELLKRYD 152
           Y+ILRK+GEG+FG+V    DR+    VA+KV+     S  K  E  + EI +L  L    
Sbjct: 2   YRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASL---- 54

Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYR-PFPVDLVREIGRQLLECV 210
                 V++ ++F     + +V E + G SL D L+K   + P        I  Q+L  +
Sbjct: 55  NHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSAL 114

Query: 211 AFMHDLRLIHTDLKPENILFVSPEY-LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
            ++H   +IH D+KPENIL       +K+ D+                    A  + D G
Sbjct: 115 EYLHSKGIIHRDIKPENILLDRDGRVVKLIDF------------------GLAKLLPDPG 156

Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPC---DMWSVGCILIELCSGEALFQTHEN 326
           ST+      +  V T  Y APEV+LGL  +Y     D+WS+G  L EL +G   F+    
Sbjct: 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFE---- 212

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
                                           G  +    + + + I  +        L 
Sbjct: 213 --------------------------------GEKNSSATSQTLKIILELPTPSLASPLS 240

Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
             + +  +    DLL+ LL  DP +RL++   L H    
Sbjct: 241 PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279

Length = 384

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  126 bits (319), Expect = 3e-33
 Identities = 94/349 (26%), Positives = 145/349 (41%), Gaps = 81/349 (23%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKR 150
           + ++ L +IGEGT+G V    D  +GE VA+K VR +   R+    +++ EI +L  L+ 
Sbjct: 7   TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVR-MDNERDGIPISSLREITLLLNLRH 65

Query: 151 YDRSGSRCVQIRNWF--DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                   V+++      + + I +V E     L   L  N   PF    V+ +  QLL 
Sbjct: 66  -----PNIVELKEVVVGKHLDSIFLVMEYCEQDLASLL-DNMPTPFSESQVKCLMLQLLR 119

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H+  +IH DLK  N+L                   TD            +K+ DF
Sbjct: 120 GLQYLHENFIIHRDLKVSNLLL------------------TD---------KGCLKIADF 152

Query: 269 G-STAYEHQEHNYI--VSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTH 324
           G +  Y          V T  YRAPE++LG   ++   DMW+VGCIL EL + + L    
Sbjct: 153 GLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK 212

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
             +E L ++ ++LG            P E         WP              LP +  
Sbjct: 213 SEIEQLDLIIQLLG-----------TPNESI-------WP----------GFSDLPLVGK 244

Query: 385 LVMQH-----VDHSAGYL----IDLLQGLLRYDPSSRLTAHDALKHPFF 424
             +       + H   +L    + LL  LL YDP  R TA +AL+  +F
Sbjct: 245 FTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score =  126 bits (318), Expect = 6e-33
 Identities = 99/345 (28%), Positives = 160/345 (46%), Gaps = 68/345 (19%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA---MTEIDVLELLKRYD 152
           RYKI   IG+G++G V   +D  TGE VAIK +  + ++   A   + EI +L LL+  D
Sbjct: 1   RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPD 60

Query: 153 RSGSRCVQIRNWF------DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR-- 204
                 V+I++        ++++ I +VFE++   L+  ++ N+      DL  E  +  
Sbjct: 61  -----IVEIKHIMLPPSRREFKD-IYVVFELMESDLHQVIKAND------DLTPEHHQFF 108

Query: 205 --QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
             QLL  + ++H   + H DLKP+NIL  +   LKI D+ +   +  D          +A
Sbjct: 109 LYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT--------PTA 160

Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSY--PCDMWSVGCILIELCSGEAL 320
           I   D+             V+TR YRAPE+       Y    D+WS+GCI  E+ +G+ L
Sbjct: 161 IFWTDY-------------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPL 207

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRV-DKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
           F     +  L ++  +LG      + RV ++ A +++   R   P   +         K 
Sbjct: 208 FPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQ--------KF 259

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           P        + D  A   + LL+ LL +DP  R TA +AL  P+F
Sbjct: 260 P--------NADPLA---LRLLERLLAFDPKDRPTAEEALADPYF 293

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score =  123 bits (311), Expect = 2e-32
 Identities = 102/343 (29%), Positives = 151/343 (44%), Gaps = 73/343 (21%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKRY 151
           +Y+ L KIGEGT+G V    +RET E VA+K VR +    E    +A+ EI +L+ LK  
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKELKH- 58

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                  V++ +       + +VFE     L  +    N    P ++V+    QLL+ +A
Sbjct: 59  ----KNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDP-EIVKSFMFQLLKGLA 113

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           F H   ++H DLKP+N+L      LK+ D+               L ++  I V      
Sbjct: 114 FCHSHNVLHRDLKPQNLLINKNGELKLADFG--------------LARAFGIPV-----R 154

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTHENLEH 329
            Y  +     V T  YR P+V+ G   +S   DMWS GCI  EL  +G  LF  ++  + 
Sbjct: 155 CYSAE-----VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 209

Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
           L  + R+LG            P E+        WP           V KLP  +   M  
Sbjct: 210 LKRIFRLLG-----------TPTEE-------SWP----------GVSKLPDYKPYPMYP 241

Query: 390 VDHSAGYLI--------DLLQGLLRYDPSSRLTAHDALKHPFF 424
              S   ++        DLLQ LL  +P  R++A +AL+HP+F
Sbjct: 242 ATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score =  122 bits (309), Expect = 4e-32
 Identities = 100/339 (29%), Positives = 156/339 (46%), Gaps = 64/339 (18%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLKRYD 152
           +Y+ L  +GEG++G V+ C  +ETG+ VAIK        K  ++ AM EI +L+ L R++
Sbjct: 2   KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-RHE 60

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL--VREIGRQLLECV 210
                 V +   F  +  + +VFE +  ++ D L K    P  +D   VR+   Q+L  +
Sbjct: 61  ----NLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGI 113

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
            F H   +IH D+KPENIL VS                           S  +K+ DFG 
Sbjct: 114 EFCHSHNIIHRDIKPENIL-VSQ--------------------------SGVVKLCDFGF 146

Query: 270 --STAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
             + A   + +   V+TR YRAPE+++G   +    D+W+VGC++ E+ +GE LF    +
Sbjct: 147 ARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD 206

Query: 327 LEHLAMMERVLGP-IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
           ++ L  + + LG  IP+H       P    +R   +   E    R         P+L  L
Sbjct: 207 IDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKR--------FPKLSGL 258

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           V           +DL +  LR DP  R ++   L H FF
Sbjct: 259 V-----------LDLAKQCLRIDPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  121 bits (306), Expect = 7e-32
 Identities = 80/345 (23%), Positives = 138/345 (40%), Gaps = 103/345 (29%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLK--- 149
           +Y+I+++IG+G+FG+V     +  G+   +K +      +K RE A+ E+ +L+ L    
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60

Query: 150 --RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFL--RKNNYRPFPVDLVREIGR 204
             +Y             F+ +  +CIV E   G  L   +  +K   +PFP + + +   
Sbjct: 61  IIKY----------YESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFV 110

Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           QL   + ++H  +++H D+KP+NI                            L  +  +K
Sbjct: 111 QLCLALKYLHSRKILHRDIKPQNIF---------------------------LTSNGLVK 143

Query: 265 VIDFG-STAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
           + DFG S            +V T +Y +PE+     ++Y  D+WS+GC+L ELC+ +  F
Sbjct: 144 LGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPF 203

Query: 322 QTHENLEHLAM--MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
           +  ENL  LA+  ++    PIP                           S E        
Sbjct: 204 E-GENLLELALKILKGQYPPIPSQ------------------------YSSE-------- 230

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                            L +L+  LL+ DP  R +    L+ PF 
Sbjct: 231 -----------------LRNLVSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score =  121 bits (306), Expect = 1e-31
 Identities = 95/340 (27%), Positives = 142/340 (41%), Gaps = 63/340 (18%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD--- 152
           +Y+ + +IG G +G V    D  +G  VA+K VR         ++ +  + LLKR +   
Sbjct: 1   QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFD 60

Query: 153 -----RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
                R    C   R   D    + +VFE +   L  +L K      P + ++++ RQ L
Sbjct: 61  HPNIVRLMDVCATSRT--DRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFL 118

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + F+H   ++H DLKPENIL             VT+                 +K+ D
Sbjct: 119 RGLDFLHANCIVHRDLKPENIL-------------VTSGG--------------QVKLAD 151

Query: 268 FG-STAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           FG +  Y        +V T  YRAPEV+L   ++ P DMWSVGCI  E+   + LF  + 
Sbjct: 152 FGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 211

Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGAT-SRESIKAVLKLPRLQN 384
             + L  +  ++G            P E        DWP   T  R +       PR   
Sbjct: 212 EADQLGKIFDLIG-----------LPPED-------DWPRDVTLPRGAFS-----PRGPR 248

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            V   V         LL  +L ++P  R++A  AL+HPFF
Sbjct: 249 PVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  119 bits (301), Expect = 3e-31
 Identities = 81/330 (24%), Positives = 135/330 (40%), Gaps = 88/330 (26%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMT--EIDVLELLKRYDRSGSRC 158
           +G+G+FG+VL    ++TG+  A+KV++   I K +E   T  E ++L  +          
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH-----PFI 55

Query: 159 VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           V++   F     + +V E   G  L+  L K     F  +  R    +++  + ++H L 
Sbjct: 56  VKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGR--FSEERARFYAAEIVLALEYLHSLG 113

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +I+ DLKPENIL  +  ++K+ D+                    A ++   GS       
Sbjct: 114 IIYRDLKPENILLDADGHIKLTDF------------------GLAKELSSEGSRTNT--- 152

Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVL 337
                 T  Y APEV+LG G+    D WS+G +L E+ +G+  F   +  E   + E++L
Sbjct: 153 ---FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IYEKIL 206

Query: 338 GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL 397
                               +  L +PE  +                             
Sbjct: 207 --------------------KDPLRFPEFLSPE--------------------------A 220

Query: 398 IDLLQGLLRYDPSSRLTAHDA--LK-HPFF 424
            DL+ GLL+ DP+ RL +  A  +K HPFF
Sbjct: 221 RDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  120 bits (302), Expect = 4e-31
 Identities = 98/333 (29%), Positives = 155/333 (46%), Gaps = 52/333 (15%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +Y+ + KIGEGT+G V    DR T ET+A+K +R  ++      T I  + LLK      
Sbjct: 3   QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGN 62

Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              V++++       + +VFE L   L   +  +        L++    Q+L  +A+ H 
Sbjct: 63  --IVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS 120

Query: 216 LRLIHTDLKPENILF-VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            R++H DLKP+N+L       LK+ D+               L ++  I V       + 
Sbjct: 121 HRVLHRDLKPQNLLIDRRTNALKLADFG--------------LARAFGIPV-----RTFT 161

Query: 275 HQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
           H+     V T  YRAPE++LG   +S P D+WSVGCI  E+ + + LF     ++ L  +
Sbjct: 162 HE-----VVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKI 216

Query: 334 ERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVD 391
            R+LG            P E+        WP G TS    K+       ++L  V+  ++
Sbjct: 217 FRILG-----------TPNEE-------TWP-GVTSLPDYKSAFPKWPPKDLATVVPTLE 257

Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            +    +DLL  +LR DPS R+TA  AL+H +F
Sbjct: 258 PAG---VDLLSKMLRLDPSKRITARAALEHEYF 287

Length = 294

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score =  119 bits (301), Expect = 2e-30
 Identities = 94/344 (27%), Positives = 160/344 (46%), Gaps = 73/344 (21%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYREAA----MTEID 143
           RY+ L  +G G +GQV    D +TG  VAIK         + + + YRE      M   +
Sbjct: 16  RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHEN 75

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S    + ++ D    + +V  ++G  L + ++    +    D ++ + 
Sbjct: 76  VIGLLDVFTPASS----LEDFQD----VYLVTHLMGADLNNIVKC---QKLSDDHIQFLV 124

Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP NI                      VN      +   +
Sbjct: 125 YQILRGLKYIHSAGIIHRDLKPSNIA---------------------VN------EDCEL 157

Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G+ LF 
Sbjct: 158 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFP 217

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK-LPR 381
                +H+  ++R+        +  V  P E+ +++          S ES +  ++ LP+
Sbjct: 218 ---GSDHIDQLKRI--------MNLVGTPDEELLQK---------ISSESARNYIQSLPQ 257

Query: 382 LQNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +     + V   A  L IDLL+ +L  DP  R+TA +AL HP+ 
Sbjct: 258 MPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYL 301

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score =  119 bits (299), Expect = 3e-30
 Identities = 93/356 (26%), Positives = 150/356 (42%), Gaps = 59/356 (16%)

Query: 91  ENLTSRYKILRK-IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA------------ 137
            +++ RY      +GEGT+G+V    D  TG+ VAIK V+ I+   +             
Sbjct: 4   FSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGI 63

Query: 138 ---AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRK--NNYR 192
               + E+ ++  +K  +  G   V +   F     I +V +++     D L+K  +   
Sbjct: 64  HFTTLRELKIMNEIKHENIMGLVDVYVEGDF-----INLVMDIMA---SD-LKKVVDRKI 114

Query: 193 PFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
                 V+ I  Q+L  +  +H    +H DL P NI   S    KI D+ +  R      
Sbjct: 115 RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPP- 173

Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCIL 311
           Y   L K   ++           +E    V T  YRAPE+++G   + +  DMWSVGCI 
Sbjct: 174 YSDTLSKDETMQ---------RREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIF 224

Query: 312 IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRE 371
            EL +G+ LF     ++ L  +  +LG            P E        +WP+      
Sbjct: 225 AELLTGKPLFPGENEIDQLGRIFELLG-----------TPNED-------NWPQAKKLPL 266

Query: 372 SIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
             +   + P+    +  +    A   IDLLQ LL+ +P  R++A +ALKH +F  D
Sbjct: 267 YTEFTPRKPKDLKTIFPNASDDA---IDLLQSLLKLNPLERISAKEALKHEYFKSD 319

Length = 335

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  116 bits (294), Expect = 4e-30
 Identities = 90/334 (26%), Positives = 129/334 (38%), Gaps = 84/334 (25%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA----AMTEIDVLELLKRYDRSGSRC 158
           I +G +G+V     + TG+  AIKV++     R+      +TE D+L             
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-----QSPYV 55

Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           V++   F  + ++ +V E L G  L   L   N      D+ R    +++  + ++H   
Sbjct: 56  VKLYYSFQGKKNLYLVMEYLPGGDLASLLE--NVGSLDEDVARIYIAEIVLALEYLHSNG 113

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLKP+NIL  S  +LK+ D+ +                S    V    +   + +E
Sbjct: 114 IIHRDLKPDNILIDSNGHLKLTDFGL----------------SKVGLVRRQINLNDDEKE 157

Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVL 337
              IV T  Y APEVILG G S   D WS+GCIL E   G   F  H             
Sbjct: 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPF--HG------------ 203

Query: 338 GPIPQHMLKRVDKPAEKF--VRRGRLDWPEG-ATSRESIKAVLKLPRLQNLVMQHVDHSA 394
                      + P E F  +  G+++WPE    S E                       
Sbjct: 204 -----------ETPEEIFQNILNGKIEWPEDVEVSDE----------------------- 229

Query: 395 GYLIDLLQGLLRYDPSSRLTAHDA---LKHPFFT 425
              IDL+  LL  DP  RL A        HPFF 
Sbjct: 230 --AIDLISKLLVPDPEKRLGAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score =  117 bits (295), Expect = 1e-29
 Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 64/342 (18%)

Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAI-KVVRSIKK--YREAAMTEIDVLELLK 149
           L  RY  L+++G G +G V   +D+ TGE VAI K+ R  +   + + A  E+ +L+ ++
Sbjct: 13  LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQ 72

Query: 150 RYDRSGSRCVQI-----RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR 204
             +  G   V         + D        F ++ P +   L+K    P   D V+ +  
Sbjct: 73  HENVIGLLDVFTSAVSGDEFQD--------FYLVMPYMQTDLQKIMGHPLSEDKVQYLVY 124

Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+L  + ++H   +IH DLKP N+                      VN      +   +K
Sbjct: 125 QMLCGLKYIHSAGIIHRDLKPGNLA---------------------VN------EDCELK 157

Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQT 323
           ++DFG   +   E    V TR YRAPEVIL  + ++   D+WSVGCI+ E+ +G+ LF+ 
Sbjct: 158 ILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 217

Query: 324 HENLEHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
            + L+ L  + +V G P P+ + K  DK A+ +                 IK++ K PR 
Sbjct: 218 KDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSY-----------------IKSLPKYPRK 260

Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               +     ++   +DLL+ +L  D   RLTA +AL+HP+F
Sbjct: 261 DFSTL--FPKASPQAVDLLEKMLELDVDKRLTATEALEHPYF 300

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score =  116 bits (291), Expect = 3e-29
 Identities = 94/345 (27%), Positives = 154/345 (44%), Gaps = 76/345 (22%)

Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYREAAMTEIDV 144
           +T+RY  L+ +G G FG V    D+ TG+ VAIK         V + + YRE        
Sbjct: 8   ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRE-------- 59

Query: 145 LELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR 204
           L+LLK         +    +      I  V E+LG  L+  L     RP     ++    
Sbjct: 60  LKLLKHLRHENIISLS-DIFISPLEDIYFVTELLGTDLHRLLTS---RPLEKQFIQYFLY 115

Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+L  + ++H   ++H DLKP NIL                     +N      ++  +K
Sbjct: 116 QILRGLKYVHSAGVVHRDLKPSNIL---------------------IN------ENCDLK 148

Query: 265 VIDFG-STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ 322
           + DFG +   + Q   Y VSTR+YRAPE++L    +    D+WS GCI  E+  G+ LF 
Sbjct: 149 ICDFGLARIQDPQMTGY-VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFP 207

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             +++   +++  +LG  P  ++  +                    S  +++ V  LP+ 
Sbjct: 208 GKDHVNQFSIITDLLGTPPDDVINTI-------------------CSENTLRFVQSLPKR 248

Query: 383 QNL----VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
           + +      ++ D SA   IDLL+ +L +DP  R++A +AL HP+
Sbjct: 249 EPVPFSEKFKNADPSA---IDLLEKMLVFDPQKRISAAEALAHPY 290

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  115 bits (290), Expect = 7e-29
 Identities = 94/337 (27%), Positives = 152/337 (45%), Gaps = 47/337 (13%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELL 148
            ++  RY+ L  IGEG +G V     + TG  VAIK +   +   + +  + EI +L   
Sbjct: 1   FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF 60

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
           K  +  G   +     F+  N + IV E++   LY  ++  +      D ++    Q+L 
Sbjct: 61  KHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQH---LSNDHIQYFLYQILR 117

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H   ++H DLKP N+L  +   LKI D+ + AR               A    D 
Sbjct: 118 GLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGL-AR--------------IADPEHDH 162

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENL 327
                E+      V+TR YRAPE++L   G++   D+WSVGCIL E+ S   LF   + L
Sbjct: 163 TGFLTEY------VATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL 216

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ-NLV 386
             L ++  VLG   Q  L  +                    +R  IK++   P++  N +
Sbjct: 217 HQLNLILGVLGTPSQEDLNCIISL----------------RARNYIKSLPFKPKVPWNKL 260

Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
             + D  A   +DLL  +L ++P  R+T  +AL HP+
Sbjct: 261 FPNADPKA---LDLLDKMLTFNPHKRITVEEALAHPY 294

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  113 bits (284), Expect = 8e-29
 Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 43/230 (18%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA---AMTEIDVLELLKRYD 152
            Y++   IG G FG V   L+ ETG+ VAIK +   K   EA    M EID+L+ LK   
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKH-- 58

Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 V+     +  + + I+ E     SL   ++K    PFP  LV     Q+L+ +A
Sbjct: 59  ---PNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLA 113

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS- 270
           ++H+  +IH D+K  NIL                             K   +K+ DFG  
Sbjct: 114 YLHEQGVIHRDIKAANIL---------------------------TTKDGVVKLADFGVA 146

Query: 271 ---TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                    + + +V T ++ APEVI   G S   D+WS+GC +IEL +G
Sbjct: 147 TKLNDVSKDDAS-VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTG 195

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score =  113 bits (284), Expect = 3e-28
 Identities = 96/344 (27%), Positives = 160/344 (46%), Gaps = 71/344 (20%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYRE----AAMTEI 142
            RY+ L+++G G +G V   LDR TG  VAIK +         + + YRE      M   
Sbjct: 15  DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHE 74

Query: 143 DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI 202
           +V+ LL  +    S         D  +   +V   +G  L   ++   +     D ++ +
Sbjct: 75  NVIGLLDVFTPDLS--------LDRFHDFYLVMPFMGTDLGKLMK---HEKLSEDRIQFL 123

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
             Q+L+ + ++H   +IH DLKP N+                      VN      +   
Sbjct: 124 VYQMLKGLKYIHAAGIIHRDLKPGNLA---------------------VN------EDCE 156

Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALF 321
           +K++DFG       E    V TR YRAPEVIL  + ++   D+WSVGCI+ E+ +G+ LF
Sbjct: 157 LKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLF 216

Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
           + H++L+ L  + +V G            P+++FV++          S ++   V KLPR
Sbjct: 217 KGHDHLDQLMEIMKVTG-----------TPSKEFVQK--------LQSEDAKNYVKKLPR 257

Query: 382 LQNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFF 424
            +    + +  +A  L +++L+ +L  D  SR+TA +AL HP+F
Sbjct: 258 FRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYF 301

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  111 bits (281), Expect = 4e-28
 Identities = 76/339 (22%), Positives = 130/339 (38%), Gaps = 72/339 (21%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKRYD 152
           +K  + IGEG+F  V+   ++ET +  AIK++   +  +E        E +VL  L  + 
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH- 61

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 +++   F    ++  V E      L  ++RK  Y        R    ++L  + 
Sbjct: 62  ---PGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALE 116

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR--SPTDVNYYKRLPKSSAIKVIDFG 269
           ++H   +IH DLKPENIL     ++KI D+  TA+   P       +   ++    I   
Sbjct: 117 YLHSKGIIHRDLKPENILLDKDMHIKITDFG-TAKVLDPNSSPESNKGDATNIDSQI--- 172

Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                 +     V T  Y +PE++         D+W++GCI+ ++ +G+  F+       
Sbjct: 173 --EKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFR------- 223

Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
                   G       +++ K    F      ++P  A                      
Sbjct: 224 --------GSNEYLTFQKILKLEYSFPP----NFPPDA---------------------- 249

Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAH---DALK-HPFF 424
                    DL++ LL  DP  RL  +   D LK HPFF
Sbjct: 250 --------KDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score =  111 bits (280), Expect = 1e-27
 Identities = 92/345 (26%), Positives = 153/345 (44%), Gaps = 61/345 (17%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA----AMTEIDVLELLKR 150
           S+Y+ L KIG+GTFG+V     ++T + VA+K V  ++  +E     A+ EI +L+LLK 
Sbjct: 12  SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVL-MENEKEGFPITALREIKILQLLKH 70

Query: 151 YD--RSGSRCVQIRNWFD-YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
            +       C      ++ Y+    +VFE     L   L  N    F +  ++++ + LL
Sbjct: 71  ENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLL-SNKNVKFTLSEIKKVMKMLL 129

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++H  +++H D+K  NIL                           + K   +K+ D
Sbjct: 130 NGLYYIHRNKILHRDMKAANIL---------------------------ITKDGILKLAD 162

Query: 268 FG-----STAYEHQEHNYI--VSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEA 319
           FG     S +   + + Y   V T  YR PE++LG   +  P DMW  GCI+ E+ +   
Sbjct: 163 FGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSP 222

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
           + Q +     L ++ ++ G I   +   VDK  E F    +++ P+G   +   +     
Sbjct: 223 IMQGNTEQHQLTLISQLCGSITPEVWPGVDK-LELF---KKMELPQGQKRKVKER----- 273

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                L     D  A   +DL+  LL  DP+ R+ A  AL H FF
Sbjct: 274 -----LKPYVKDPHA---LDLIDKLLVLDPAKRIDADTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  110 bits (277), Expect = 1e-27
 Identities = 87/341 (25%), Positives = 138/341 (40%), Gaps = 97/341 (28%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           YK L KIGEG  G+V    DR TG+ VAIK +R  K+ +E  + EI ++           
Sbjct: 21  YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIM--------KDC 72

Query: 157 RCVQIRNWFD---YRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVRE----IGRQLLE 208
           +   I +++D     + + +V E M G SL D + +N      V +       + R++L+
Sbjct: 73  KHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQN-----FVRMNEPQIAYVCREVLQ 127

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H   +IH D+K +NIL                           L K  ++K+ DF
Sbjct: 128 GLEYLHSQNVIHRDIKSDNIL---------------------------LSKDGSVKLADF 160

Query: 269 GSTAY---EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           G  A    E  + N +V T ++ APEVI    +    D+WS+G + IE+  GE       
Sbjct: 161 GFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE------- 213

Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
                          P ++     +P            P  A    + K +   P L+N 
Sbjct: 214 ---------------PPYL----REP------------PLRALFLITTKGI---PPLKNP 239

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             +          D L   L  DP  R +A + L+HPF  +
Sbjct: 240 --EKWSPE---FKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score =  111 bits (279), Expect = 2e-27
 Identities = 92/340 (27%), Positives = 153/340 (45%), Gaps = 54/340 (15%)

Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
           + ++Y  ++ IG G +G V    + ET E VAIK + +    R  A   +  ++LL+  D
Sbjct: 3   VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLD 62

Query: 153 RSGSRCVQIRNWF-----DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
                 + I++       +  N + IV+E++   L+  +R +  +    D  +    QLL
Sbjct: 63  HEN--VIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSS--QTLSDDHCQYFLYQLL 118

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++H   ++H DLKP N+L  +   LKI D+ + AR+ ++                D
Sbjct: 119 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGL-ARTTSEKG--------------D 163

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           F  T Y        V TR YRAPE++L    ++   D+WSVGCI  EL   + LF   + 
Sbjct: 164 F-MTEY--------VVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY 214

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKP-AEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
           +  L ++  +LG   +  L  +    A +++R          T R+S       P    L
Sbjct: 215 VHQLKLITELLGSPSEEDLGFIRNEKARRYIRS------LPYTPRQSFAR--LFPHANPL 266

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                       IDLL+ +L +DPS R+T  +AL HP+  
Sbjct: 267 A-----------IDLLEKMLVFDPSKRITVEEALAHPYLA 295

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  108 bits (272), Expect = 4e-27
 Identities = 86/339 (25%), Positives = 137/339 (40%), Gaps = 87/339 (25%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYD 152
           R++   KIG GTFG+V   ++ +TGE +A+K +R   +  K  +    E+ VLELLK  +
Sbjct: 1   RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPN 60

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 V++     +R  + I  E   G +L + L   + R     ++R    QLLE +A
Sbjct: 61  LVKYYGVEV-----HREKVYIFMEYCSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLA 113

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H   ++H D+KP NI       +K+ D+                    A+K+ +  +T
Sbjct: 114 YLHSHGIVHRDIKPANIFLDHNGVIKLGDF------------------GCAVKLKNNTTT 155

Query: 272 AYEHQEHNYIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILIELCSG----EALFQTH 324
             E  +   +  T  Y APEVI G    G     D+WS+GC+++E+ +G      L    
Sbjct: 156 MGEEVQS--LAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF 213

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
           + + H+    +   PIP  +                   PEG                  
Sbjct: 214 QIMFHVGAGHK--PPIPDSLQLS----------------PEG------------------ 237

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                         D L   L  DP  R TA + L+HPF
Sbjct: 238 -------------KDFLDRCLESDPKKRPTASELLQHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  109 bits (274), Expect = 5e-27
 Identities = 98/356 (27%), Positives = 153/356 (42%), Gaps = 78/356 (21%)

Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA----AMTEIDVL 145
           G+    ++ I+ +IGEGT+GQV    D++TGE VA+K VR +   +E     A+ EI +L
Sbjct: 2   GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVR-LDNEKEGFPITAIREIKIL 60

Query: 146 ELLKRYDRSGSRCVQI----RNWFDYRNH---ICIVFEMLGPSLYDFLRKNNYRPFPVDL 198
             L    R+     +I    ++  D++       +VFE +   L   L ++    F  D 
Sbjct: 61  RQLNH--RNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLL-ESGLVHFSEDH 117

Query: 199 VREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
           ++   +QLLE + + H    +H D+K  NIL  +   +K+ D+ + AR      Y     
Sbjct: 118 IKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL-ARL-----YNSEES 171

Query: 259 KSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPC-DMWSVGCILIELCSG 317
           +    KVI                 T  YR PE++LG     P  D+WS GCIL EL + 
Sbjct: 172 RPYTNKVI-----------------TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTK 214

Query: 318 EALFQTHENLEHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           + +FQ ++ L  L ++ R+ G P P                     WP+          V
Sbjct: 215 KPIFQANQELAQLELISRLCGSPCPA-------------------VWPD----------V 245

Query: 377 LKLPRLQNLVM---------QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
           +KLP    +           +         +DLL  +L  DPS R TA +AL  P+
Sbjct: 246 IKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score =  108 bits (272), Expect = 6e-27
 Identities = 101/331 (30%), Positives = 151/331 (45%), Gaps = 52/331 (15%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y  L K+GEGT+  V     + T   VA+K +R ++    A  T I  + LLK    +  
Sbjct: 7   YVKLDKLGEGTYATVFKGRSKLTENLVALKEIR-LEHEEGAPCTAIREVSLLKNLKHAN- 64

Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V + +       + +VFE L   L  +L  N      +  V+    QLL  +++ H  
Sbjct: 65  -IVTLHDIIHTERCLTLVFEYLDSDLKQYL-DNCGNLMSMHNVKIFMFQLLRGLSYCHKR 122

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           +++H DLKP+N+L      LK+ D+ + AR+       K +P           +  Y ++
Sbjct: 123 KILHRDLKPQNLLINEKGELKLADFGL-ARA-------KSVP-----------TKTYSNE 163

Query: 277 EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YR P+V+LG   +S P DMW VGCIL E+ +G  +F      E L ++ R
Sbjct: 164 -----VVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFR 218

Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP--RLQNLVMQHVDHS 393
           +LG            P E+        WP G TS E  ++ L  P  R Q L+  H    
Sbjct: 219 LLG-----------TPTEE-------TWP-GITSNEEFRSYL-FPQYRAQPLI-NHAPRL 257

Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               IDLL  LL Y+  SR++A  AL+H +F
Sbjct: 258 DTDGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score =  107 bits (269), Expect = 2e-26
 Identities = 95/341 (27%), Positives = 147/341 (43%), Gaps = 69/341 (20%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           YK L K+GEG++  V     + TG+ VA+K +R ++    A  T I    LLK  D   +
Sbjct: 7   YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIR-LEHEEGAPFTAIREASLLK--DLKHA 63

Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRK-------NNYRPFPVDLVREIGRQLLEC 209
             V + +    +  + +VFE L   L  ++         +N R F          QLL  
Sbjct: 64  NIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLF--------QLLRG 115

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +A+ H  R++H DLKP+N+L      LK+ D+ + AR+       K +P           
Sbjct: 116 LAYCHQRRVLHRDLKPQNLLISERGELKLADFGL-ARA-------KSVP----------- 156

Query: 270 STAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN-L 327
           S  Y ++     V T  YR P+V+LG   +S   DMW VGCI  E+ +G  LF    +  
Sbjct: 157 SKTYSNE-----VVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE 211

Query: 328 EHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           + L  + RVLG P  +                    WP G +S    K     P      
Sbjct: 212 DQLHKIFRVLGTPTEE-------------------TWP-GVSSNPEFKP-YSFPFYPPRP 250

Query: 387 MQHVDHSAGYL---IDLLQGLLRYDPSSRLTAHDALKHPFF 424
           + +       +    +L    L+Y+P  R++A +A+KHP+F
Sbjct: 251 LINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score =  108 bits (271), Expect = 3e-26
 Identities = 92/356 (25%), Positives = 162/356 (45%), Gaps = 73/356 (20%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMTEIDVLELL-- 148
           +L SRY  LR +G G+ G V   +D +  + VA+K +V +  +  + A+ EI ++  L  
Sbjct: 2   DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDH 61

Query: 149 ----KRYD---RSGSRCVQ-IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVR 200
               K Y+    SGS   + + +  +  + + IV E +   L + L +    P   +  R
Sbjct: 62  DNIVKVYEVLGPSGSDLTEDVGSLTELNS-VYIVQEYMETDLANVLEQG---PLSEEHAR 117

Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE--YLKIPDYKVTARSPTDVNYYKRLP 258
               QLL  + ++H   ++H DLKP N+ F++ E   LKI D+ +               
Sbjct: 118 LFMYQLLRGLKYIHSANVLHRDLKPANV-FINTEDLVLKIGDFGLA-------------- 162

Query: 259 KSSAIKVIDFGSTAYEHQEH-NYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCS 316
                +++D     Y H+ + +  + T+ YR+P ++L    ++   DMW+ GCI  E+ +
Sbjct: 163 -----RIVD---PHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 214

Query: 317 GEALFQTHENLEHLAMMERVLGPIP------QHMLKRVDKPAEKFVRRGRLDWPEGATSR 370
           G+ LF     LE    M+ +L  +P      ++ L  V      FVR       +G   R
Sbjct: 215 GKPLFAGAHELE---QMQLILESVPVVREEDRNELLNVIP---SFVRN------DGGEPR 262

Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             ++ +L            V+  A   +D L+ +L ++P  RLTA +AL HP+ + 
Sbjct: 263 RPLRDLLP----------GVNPEA---LDFLEQILTFNPMDRLTAEEALMHPYMSC 305

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score =  108 bits (270), Expect = 3e-26
 Identities = 87/345 (25%), Positives = 155/345 (44%), Gaps = 71/345 (20%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 18  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 77

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 78  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 126

Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 127 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 159

Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 160 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 219

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   +S  +   +  L ++
Sbjct: 220 GTDHIDQLKLILRLVGTPGAELLKKI-------------------SSESARNYIQSLTQM 260

Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             +   +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 261 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score =  106 bits (265), Expect = 7e-26
 Identities = 93/342 (27%), Positives = 149/342 (43%), Gaps = 66/342 (19%)

Query: 96  RYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKR 150
           +Y+ + +IGEG +G+V    D +  G  VA+K VR ++   E    + + E+ VL  L+ 
Sbjct: 2   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLET 60

Query: 151 YD-----RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
           ++     R    C   R   D    + +VFE +   L  +L K      P + ++++  Q
Sbjct: 61  FEHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 118

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           LL  + F+H  R++H DLKP+NIL  S                           S  IK+
Sbjct: 119 LLRGLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKL 151

Query: 266 IDFG-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
            DFG +  Y  Q     +V T  YRAPEV+L   ++ P D+WSVGCI  E+   + LF+ 
Sbjct: 152 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 211

Query: 324 HENLEHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             +++ L  +  V+G P  +                   DWP                 +
Sbjct: 212 SSDVDQLGKILDVIGLPGEE-------------------DWPRDVALPRQAFHSKSAQPI 252

Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +  V    +       DLL   L ++P+ R++A+ AL HP+F
Sbjct: 253 EKFVTDIDELGK----DLLLKCLTFNPAKRISAYSALSHPYF 290

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  103 bits (259), Expect = 3e-25
 Identities = 81/335 (24%), Positives = 127/335 (37%), Gaps = 89/335 (26%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKV--VRSIKKYREAAMTEIDVLELLKRYDRSG 155
           + ++ +G+G+ G V     + TG+  A+K   V   +++R+  + E+  L          
Sbjct: 4   ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLR------SCE 57

Query: 156 SR-CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
           S   V+    F     I IV E M G SL D L+K      P  ++  I RQ+L+ + ++
Sbjct: 58  SPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYL 115

Query: 214 H-DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-ST 271
           H    +IH D+KP N+L                     +N          +K+ DFG S 
Sbjct: 116 HTKRHIIHRDIKPSNLL---------------------IN------SKGEVKIADFGISK 148

Query: 272 AYEH--QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
             E+   + N  V T  Y +PE I G  +SY  D+WS+G  L+E   G+  F        
Sbjct: 149 VLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF 208

Query: 330 LAMMERVL-GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
             +M+ +  GP P                      P    S E                 
Sbjct: 209 FELMQAICDGPPP--------------------SLPAEEFSPE----------------- 231

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                     D +   L+ DP  R +A + L+HPF
Sbjct: 232 --------FRDFISACLQKDPKKRPSAAELLQHPF 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score =  104 bits (261), Expect = 5e-25
 Identities = 98/374 (26%), Positives = 153/374 (40%), Gaps = 103/374 (27%)

Query: 96  RYKILRKIGEGTFGQVL--DCLDRETGETVAIKVVRSIKK---------YREAAM-TEID 143
           +Y+I   IG GT+G+V      + + G+  AIK  +  K+          RE A+  E+ 
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK 60

Query: 144 ---VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFL------RKNNYRPF 194
              V+ L++ +     + V +   FDY  H             D        R+      
Sbjct: 61  HENVVSLVEVFLEHADKSVYLL--FDYAEH-------------DLWQIIKFHRQAKRVSI 105

Query: 195 PVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 254
           P  +V+ +  Q+L  V ++H   ++H DLKP NIL             V    P      
Sbjct: 106 PPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANIL-------------VMGEGP------ 146

Query: 255 KRLPKSSAIKVIDFGSTAYEHQ------EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSV 307
               +   +K+ D G     +       + + +V T  YRAPE++LG   ++   D+W++
Sbjct: 147 ----ERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAI 202

Query: 308 GCILIELCSGEALFQTHE------NLEHLAMMER---VLGPIPQHMLKRVDKPAEKFVRR 358
           GCI  EL + E +F+  E      N      +ER   VLG            P EK    
Sbjct: 203 GCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGT-----------PTEK---- 247

Query: 359 GRLDW------PEGATSRESIKAV-LKLPRLQNLVMQHVDHSA-GYLIDLLQGLLRYDPS 410
              DW      PE  T  +  K        L   + +H    + G+  DLL+ LL YDP+
Sbjct: 248 ---DWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGF--DLLRKLLEYDPT 302

Query: 411 SRLTAHDALKHPFF 424
            R+TA +AL+HP+F
Sbjct: 303 KRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score =  104 bits (262), Expect = 5e-25
 Identities = 97/348 (27%), Positives = 150/348 (43%), Gaps = 69/348 (19%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYREAAMTEI---- 142
            RY+ L+ IG G  G V    D  TG+ VAIK        V  + + YRE  + ++    
Sbjct: 16  KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHK 75

Query: 143 DVLELLKRY--DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVR 200
           +++ LL  +   +S           +    + +V E++  +L   ++        +DL  
Sbjct: 76  NIIGLLNVFTPQKS----------LEEFQDVYLVMELMDANLCQVIQ--------MDLDH 117

Query: 201 E----IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
           E    +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+ + AR          
Sbjct: 118 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-AR---------- 166

Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                      F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+  
Sbjct: 167 ------TAGTSFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR 212

Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR-RGRLDWPEGATSRESIKA 375
           G  LF   ++++    +   LG      + R+      +V  R +     G +  E    
Sbjct: 213 GTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKY---AGYSFEELFPD 269

Query: 376 VLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
           VL  P  ++    H    A    DLL  +L  DP  R++  DAL+HP+
Sbjct: 270 VLFPPDSES----HNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score =  103 bits (259), Expect = 9e-25
 Identities = 91/346 (26%), Positives = 158/346 (45%), Gaps = 73/346 (21%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D    + VA+K        ++ + + YRE      M   +
Sbjct: 16  RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHEN 75

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S    I N+    N + +V  ++G  L + ++    +    + V+ + 
Sbjct: 76  VIGLLDVFTPATS----IENF----NEVYLVTNLMGADLNNIVK---CQKLSDEHVQFLI 124

Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            QLL  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 125 YQLLRGLKYIHSAGIIHRDLKPSNVA---------------------VN------EDCEL 157

Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           +++DFG       E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL  G+ALF 
Sbjct: 158 RILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFP 217

Query: 323 THENLEHLA-MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
            ++ ++ L  +ME V  P P+ + K   + A K+++                     LP 
Sbjct: 218 GNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQ--------------------SLPH 257

Query: 382 LQNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           +    ++ +   A  L IDLL+ +L  D   R++A +AL HP+F++
Sbjct: 258 MPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  101 bits (253), Expect = 3e-24
 Identities = 85/345 (24%), Positives = 126/345 (36%), Gaps = 102/345 (29%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLE----LLKR 150
             + +L  IG+G+FG+V   +D+ T + VAIKV+       E A  EI+ ++     L  
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVID-----LEEAEDEIEDIQQEIQFL-- 53

Query: 151 YDRSGSRCVQIRNWF-----DYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGR 204
              S  R   I  ++       +  + I+ E   G S  D L+           +  I R
Sbjct: 54  ---SQCRSPYITKYYGSFLKGSK--LWIIMEYCGGGSCLDLLK---PGKLDETYIAFILR 105

Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           ++L  + ++H+   IH D+K  NIL                           L +   +K
Sbjct: 106 EVLLGLEYLHEEGKIHRDIKAANIL---------------------------LSEEGDVK 138

Query: 265 VIDFG-STAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
           + DFG S        + N  V T  + APEVI   G+    D+WS+G   IEL  GE   
Sbjct: 139 LADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEP-- 196

Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
                L  L  M RVL  IP++       P                            P 
Sbjct: 197 ----PLSDLHPM-RVLFLIPKN------NP----------------------------PS 217

Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           L     +    S     D +   L  DP  R +A + LKH F  +
Sbjct: 218 L-----EGNKFSKP-FKDFVSLCLNKDPKERPSAKELLKHKFIKK 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 99.4 bits (248), Expect = 7e-24
 Identities = 67/238 (28%), Positives = 104/238 (43%), Gaps = 47/238 (19%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSI-KKYREAAMTEIDVLELLK--- 149
            +K+L+K+G+G++G V         +  A+K V   S+ +K RE A+ EI +L  +    
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 150 --RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNY--RPFPVDLVREIGR 204
              Y  +          F   N +CIV E      L   + K     +  P   +  I  
Sbjct: 61  IISYKEA----------FLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFI 110

Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           QLL  +  +H+ +++H DLK  NIL V+ + +KI           D+   K L K+ A  
Sbjct: 111 QLLRGLQALHEQKILHRDLKSANILLVANDLVKI----------GDLGISKVLKKNMAKT 160

Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
            I                 T HY APEV  G  +SY  D+WS+GC+L E+ +    F+
Sbjct: 161 QI----------------GTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score =  101 bits (254), Expect = 8e-24
 Identities = 89/341 (26%), Positives = 141/341 (41%), Gaps = 74/341 (21%)

Query: 101 RKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYREAAM-------TEIDVL 145
           R IG G FG V    D   G+ VA+K        +V   + +RE  M         +  L
Sbjct: 6   RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSAL 65

Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
           ++L+                D    I +V E++   L+  +     +P   D V+    Q
Sbjct: 66  DILQPPH------------IDPFEEIYVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQ 111

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +L  + ++H   ++H D+KP N+L  S   LKI D+ + AR                  V
Sbjct: 112 ILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGL-AR------------------V 152

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTH 324
            +   + +  QE    V T++YRAPE+++G   ++   D+WSVGCI  EL     LFQ  
Sbjct: 153 EEPDESKHMTQE----VVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ 208

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
             ++ L ++  +LG      ++   + A   + RG                  K P L  
Sbjct: 209 SPIQQLDLITDLLGTPSLEAMRSACEGARAHILRG----------------PHKPPSLPV 252

Query: 385 LVM--QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
           L        H A   + LL  +L +DP  R++A DAL HP+
Sbjct: 253 LYTLSSQATHEA---VHLLCRMLVFDPDKRISAADALAHPY 290

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 98.6 bits (246), Expect = 5e-23
 Identities = 92/362 (25%), Positives = 153/362 (42%), Gaps = 96/362 (26%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRET--GETVAIKVVRSI--KKYREAAMTEIDVLELLKRY 151
           RY++++++G+G +G V    + ET   ETVAIK + ++  KK             L KR 
Sbjct: 1   RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKI------------LAKRA 48

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDF--LRKNNYR-------PFPVDLVREI 202
            R      +++    +R H  I        LYD   +   N+            DL + I
Sbjct: 49  LR------ELKLLRHFRGHKNIT------CLYDMDIVFPGNFNELYLYEELMEADLHQII 96

Query: 203 GR--------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP 248
                           Q+L  + ++H   ++H DLKP N+L  +   LKI D+ + AR  
Sbjct: 97  RSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGL-ARG- 154

Query: 249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGL-GWSYPCDMW 305
                              F     E+      Y V+TR YRAPE++L    ++   D+W
Sbjct: 155 -------------------FSENPGENAGFMTEY-VATRWYRAPEIMLSFQSYTKAIDVW 194

Query: 306 SVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKP-AEKFVRRGRLDWP 364
           SVGCIL EL   + +F+  + ++ L  + +VLG   +  L R+  P A+ ++R   L   
Sbjct: 195 SVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIR--SLPNI 252

Query: 365 EGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                            +      + +  A   +DLL+ LL +DP+ R++  +AL+HP+ 
Sbjct: 253 PK----------KPFESI----FPNANPLA---LDLLEKLLAFDPTKRISVEEALEHPYL 295

Query: 425 TR 426
             
Sbjct: 296 AI 297

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 95.3 bits (237), Expect = 2e-22
 Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 35/219 (15%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV------RSIKKYREAAMTEIDVLELLKRYDRSGS 156
           +G+G FG+V  C D +TG  +A+K V         KK   A   EI +L+ L+       
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH-----E 64

Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           R VQ          + I  E M G S+ D L+   Y      + R+  RQ+LE V ++H 
Sbjct: 65  RIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHS 122

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             ++H D+K  NIL  S   +K+ D+  + R                ++ I    T  + 
Sbjct: 123 NMIVHRDIKGANILRDSAGNVKLGDFGASKR----------------LQTICSSGTGMKS 166

Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                +  T ++ +PEVI G G+    D+WSVGC ++E+
Sbjct: 167 -----VTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEM 200

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 96.2 bits (239), Expect = 3e-22
 Identities = 92/330 (27%), Positives = 147/330 (44%), Gaps = 50/330 (15%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y  L K+GEGT+  V     + T   VA+K +R ++    A  T I  + LLK  D   +
Sbjct: 8   YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIR-LEHEEGAPCTAIREVSLLK--DLKHA 64

Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V + +       + +VFE L   L  +L  +      +  V+    QLL  + + H  
Sbjct: 65  NIVTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNSINMHNVKLFLFQLLRGLNYCHRR 123

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           +++H DLKP+N+L      LK+ D+ + AR+       K +P           +  Y ++
Sbjct: 124 KVLHRDLKPQNLLINERGELKLADFGL-ARA-------KSIP-----------TKTYSNE 164

Query: 277 EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YR P+++LG   +S   DMW VGCI  E+ +G  LF      E L  + R
Sbjct: 165 -----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFR 219

Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ-NLVMQHVDHSA 394
           +LG            P E+        WP G  S E  K+    P+ + + +  H     
Sbjct: 220 ILG-----------TPTEE-------TWP-GILSNEEFKS-YNYPKYRADCLHNHAPRLD 259

Query: 395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               +LL  LL+++   R++A +A+KHP+F
Sbjct: 260 SDGAELLSKLLQFEGRKRISAEEAMKHPYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 93.5 bits (233), Expect = 1e-21
 Identities = 84/345 (24%), Positives = 128/345 (37%), Gaps = 110/345 (31%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR------SIKKYREAAMTEIDVLE---- 146
           + IL K+GEG++G V   + +ETG+ VAIKVV        I K       EI +L+    
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIK-------EISILKQCDS 57

Query: 147 --LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIG 203
             ++K Y   GS        +     + IV E  G  S+ D ++  N +    + +  I 
Sbjct: 58  PYIVKYY---GS--------YFKNTDLWIVMEYCGAGSVSDIMKITN-KTLTEEEIAAIL 105

Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q L+ + ++H  + IH D+K  NIL                           L +    
Sbjct: 106 YQTLKGLEYLHSNKKIHRDIKAGNIL---------------------------LNEEGQA 138

Query: 264 KVIDFGSTA---YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE-A 319
           K+ DFG +        + N ++ T  + APEVI  +G++   D+WS+G   IE+  G+  
Sbjct: 139 KLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPP 198

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
               H       M  R +  IP        KP           W     S E        
Sbjct: 199 YSDIH------PM--RAIFMIPN-------KPPPTLSDPE--KW-----SPE-------- 228

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                              D ++  L  DP  R +A   L+HPF 
Sbjct: 229 -----------------FNDFVKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 95.1 bits (236), Expect = 1e-21
 Identities = 94/355 (26%), Positives = 146/355 (41%), Gaps = 82/355 (23%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           RY+ L+ IG G  G V    D   G  VA+K +    + +  A      L LLK      
Sbjct: 22  RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK------ 75

Query: 156 SRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE-- 201
             CV  +N     N             + +V E++  +L   +         ++L  E  
Sbjct: 76  --CVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH--------MELDHERM 125

Query: 202 --IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
             +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T+         
Sbjct: 126 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN--------- 176

Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
                   F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ EL  G  
Sbjct: 177 --------FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV 220

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRV---------DKPAEKFVRRGRLDWPEGATSR 370
           +FQ  ++++    +   LG      + R+         ++P    +    L +P+     
Sbjct: 221 IFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEEL-FPDWIFPS 279

Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
           ES +  LK  + +               DLL  +L  DP  R++  +AL+HP+ T
Sbjct: 280 ESERDKLKTSQAR---------------DLLSKMLVIDPDKRISVDEALRHPYIT 319

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 93.9 bits (233), Expect = 2e-21
 Identities = 91/330 (27%), Positives = 148/330 (44%), Gaps = 50/330 (15%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y  L K+GEGT+  V     + T   VA+K +R ++    A  T I  + LLK  D   +
Sbjct: 8   YIKLEKLGEGTYATVFKGRSKLTENLVALKEIR-LEHEEGAPCTAIREVSLLK--DLKHA 64

Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V + +       + +VFE L   L  ++  +      +  V+    Q+L  +A+ H  
Sbjct: 65  NIVTLHDIVHTDKSLTLVFEYLDKDLKQYM-DDCGNIMSMHNVKIFLYQILRGLAYCHRR 123

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           +++H DLKP+N+L      LK+ D+ + AR+       K +P           +  Y ++
Sbjct: 124 KVLHRDLKPQNLLINERGELKLADFGL-ARA-------KSVP-----------TKTYSNE 164

Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YR P+V+LG   +S   DMW VGCI  E+ SG  LF      + L ++ R
Sbjct: 165 -----VVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFR 219

Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ-NLVMQHVDHSA 394
           +LG            P E+        WP G +S +  K     P+ +   ++ H     
Sbjct: 220 LLG-----------TPTEE-------TWP-GISSNDEFKN-YNFPKYKPQPLINHAPRLD 259

Query: 395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
              I+LL   L+Y+   R++A +A+KH +F
Sbjct: 260 TEGIELLTKFLQYESKKRISAEEAMKHAYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 93.9 bits (233), Expect = 7e-21
 Identities = 86/341 (25%), Positives = 151/341 (44%), Gaps = 67/341 (19%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA---MTEIDVLELLKRYDR 153
           YK+   IG G+FG V + +  +T E VAIK V    +Y+      M  ++ + ++   D 
Sbjct: 68  YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDY 127

Query: 154 SGSRCVQI--RNWFDYRNHICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLEC 209
             + C +   +N F     + +V E +  +++ +++    N    P+ LV+    QL   
Sbjct: 128 YYTECFKKNEKNIF-----LNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRA 182

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +A++H   + H DLKP+N+L                            P +  +K+ DFG
Sbjct: 183 LAYIHSKFICHRDLKPQNLLID--------------------------PNTHTLKLCDFG 216

Query: 270 STAY---EHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           S        +  +YI S R YRAPE++LG   ++   D+WS+GCI+ E+  G  +F    
Sbjct: 217 SAKNLLAGQRSVSYICS-RFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS 275

Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
           +++ L  + +VLG   +  LK ++              P  A         +K P ++  
Sbjct: 276 SVDQLVRIIQVLGTPTEDQLKEMN--------------PNYAD--------IKFPDVKPK 313

Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            ++ V    +    I+ +   L+Y+P  RL   +AL  PFF
Sbjct: 314 DLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFF 354

Length = 440

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 90.9 bits (226), Expect = 8e-21
 Identities = 81/349 (23%), Positives = 139/349 (39%), Gaps = 113/349 (32%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMT---EIDVLELLK 149
           R++    +G G+FG V + L+ + G+  A+K V      +  +EA      EI +L  L+
Sbjct: 1   RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ 60

Query: 150 -----RY---DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVR 200
                +Y   +R                 + I  E++ G SL   L+K  Y  FP  ++R
Sbjct: 61  HPNIVQYLGTEREEDN-------------LYIFLELVPGGSLAKLLKK--YGSFPEPVIR 105

Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
              RQ+L  + ++HD   +H D+K  NIL                           +  +
Sbjct: 106 LYTRQILLGLEYLHDRNTVHRDIKGANIL---------------------------VDTN 138

Query: 261 SAIKVIDFGSTAYEHQEHNYIVS---TRHYRAPEVILGLG-WSYPCDMWSVGCILIELCS 316
             +K+ DFG  A +  E ++  S   + ++ APEVI   G +    D+WS+GC ++E+ +
Sbjct: 139 GVVKLADFG-MAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMAT 197

Query: 317 GEALFQTHENLEHLAMMER--VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIK 374
           G+  +   E +  +  + R   L PIP H+                        S E   
Sbjct: 198 GKPPWSQLEGVAAVFKIGRSKELPPIPDHL------------------------SDE--- 230

Query: 375 AVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                   ++ +++                L+ DPS R TA + L+HPF
Sbjct: 231 -------AKDFILK---------------CLQRDPSLRPTAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 91.4 bits (227), Expect = 8e-21
 Identities = 70/271 (25%), Positives = 119/271 (43%), Gaps = 45/271 (16%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV----RSIKKYREAAMTEIDVL----ELLKRYDRS 154
           IG+GT+G+V   L+  TGE +A+K V        ++       +  L    E LK  D  
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68

Query: 155 GSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               VQ   +     ++ I  E + G S+   LR   Y  F   LVR    Q+LE +A++
Sbjct: 69  N--IVQYLGFETTEEYLSIFLEYVPGGSIGSCLR--TYGRFEEQLVRFFTEQVLEGLAYL 124

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLK +N+L  +    KI D+ ++ +S                         Y
Sbjct: 125 HSKGILHRDLKADNLLVDADGICKISDFGISKKS----------------------DDIY 162

Query: 274 EHQEHNYIVSTRHYRAPEVI--LGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
           ++ ++  +  +  + APEVI     G+S   D+WS+GC+++E+ +G    +   + E +A
Sbjct: 163 DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR---RPWSDEEAIA 219

Query: 332 MM-----ERVLGPIPQHMLKRVDKPAEKFVR 357
            M     +R   PIP  +   +   A  F+ 
Sbjct: 220 AMFKLGNKRSAPPIPPDVSMNLSPVALDFLN 250

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 90.4 bits (224), Expect = 2e-20
 Identities = 92/335 (27%), Positives = 144/335 (42%), Gaps = 53/335 (15%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + Y  L K+GEG++  V   + R  G+ VA+KV+ S+K       T I    LLK    +
Sbjct: 5   TSYLNLEKLGEGSYATVYKGISRINGQLVALKVI-SMKTEEGVPFTAIREASLLKGLKHA 63

Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
               V + +    +  +  VFE +   L  ++ ++     P + VR    QLL  +A++H
Sbjct: 64  N--IVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYN-VRLFMFQLLRGLAYIH 120

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
              ++H DLKP+N+L      LK+ D+ + AR+       K +P                
Sbjct: 121 GQHILHRDLKPQNLLISYLGELKLADFGL-ARA-------KSIPS--------------- 157

Query: 275 HQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ-THENLEHLAM 332
            Q ++  V T  YR P+V+LG   +S   D+W  GCI IE+  G+  F    +  E L  
Sbjct: 158 -QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEK 216

Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL---PRLQNLVMQH 389
           +  VLG            P E         WP G +   + K    L   P+   +V + 
Sbjct: 217 IWTVLG-----------VPTEDT-------WP-GVSKLPNYKPEWFLPCKPQQLRVVWKR 257

Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +        DL   +L   P  R++A DAL HP+F
Sbjct: 258 LSR-PPKAEDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 89.8 bits (223), Expect = 2e-20
 Identities = 78/333 (23%), Positives = 124/333 (37%), Gaps = 87/333 (26%)

Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR---YDRSGS 156
           L+ I +G FG V     R TG+  AIKV   +KK    A  ++  ++  +          
Sbjct: 1   LKPISKGAFGSVYLAKKRSTGDYFAIKV---LKKSDMIAKNQVTNVKAERAIMMIQGESP 57

Query: 157 RCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              ++   F  ++++ +V E L G      ++       P D  ++   +++  V  +H 
Sbjct: 58  YVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQ 115

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STAYE 274
             +IH D+KPEN+L                           + ++  +K+ DFG S    
Sbjct: 116 RGIIHRDIKPENLL---------------------------IDQTGHLKLTDFGLSRNGL 148

Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
             E+   V T  Y APE ILG+G     D WS+GC++ E   G   F             
Sbjct: 149 --ENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAE---------- 196

Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA 394
                 P  +   +           R++WPE      S +AV                  
Sbjct: 197 -----TPDAVFDNIL--------SRRINWPEEVKEFCSPEAV------------------ 225

Query: 395 GYLIDLLQGLLRYDPSSRLTAH---DALKHPFF 424
               DL+  LL  DP+ RL A+   +   HPFF
Sbjct: 226 ----DLINRLLCMDPAKRLGANGYQEIKSHPFF 254

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 87.7 bits (218), Expect = 1e-19
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 39/262 (14%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYR--EAAMTEIDVLELLKRYDRSGSRC 158
           +G G FG+V     +    T A+K V  R I +    E   +E ++LE       +    
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-----NHPFI 55

Query: 159 VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           V++   F  + +I ++ E  LG  L+  LR      F     R     ++    ++H+  
Sbjct: 56  VKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGL--FDEYTARFYIACVVLAFEYLHNRG 113

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +I+ DLKPEN+L  S  Y+K+ D+   A                  K +  G   +    
Sbjct: 114 IIYRDLKPENLLLDSNGYVKLVDFG-FA------------------KKLKSGQKTWT--- 151

Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVL 337
                 T  Y APE+IL  G+ +  D WS+G +L EL +G   F   ++ + + +   +L
Sbjct: 152 ---FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE-DDEDPMEIYNDIL 207

Query: 338 GPIPQHML-KRVDKPAEKFVRR 358
               +      +DK A+  +++
Sbjct: 208 KGNGKLEFPNYIDKAAKDLIKQ 229

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 88.2 bits (218), Expect = 1e-19
 Identities = 91/331 (27%), Positives = 150/331 (45%), Gaps = 47/331 (14%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+ L K+GEG++  V     +  G+ VA+KV+R +++      T I    LLK    +  
Sbjct: 7   YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIR-LQEEEGTPFTAIREASLLKGLKHAN- 64

Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V + +    +  + +VFE +   L  ++ K+     P + V+    QLL  ++++H  
Sbjct: 65  -IVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHP-ENVKLFLFQLLRGLSYIHQR 122

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
            ++H DLKP+N+L      LK+ D+ + AR+       K +P                H 
Sbjct: 123 YILHRDLKPQNLLISDTGELKLADFGL-ARA-------KSVP---------------SHT 159

Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPC-DMWSVGCILIELCSGEALFQTHENLE-HLAMME 334
             N +V T  YR P+V+LG      C DMW VGCI +E+  G A F   ++++  L  + 
Sbjct: 160 YSNEVV-TLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIF 218

Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA 394
            VLG            P E     G    P     R ++ +   L +  N  + +V+H+ 
Sbjct: 219 LVLG-----------TPNED-TWPGVHSLPHFKPERFTLYSPKNLRQAWN-KLSYVNHAE 265

Query: 395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
               DL   LL+  P +RL+A  AL H +F+
Sbjct: 266 ----DLASKLLQCFPKNRLSAQAALSHEYFS 292

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 86.8 bits (215), Expect = 3e-19
 Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 35/253 (13%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEI-DVLELLKRYDRSGSRC 158
           +G G F       D +TG  +A+K V   R+    +E  +  +   + L+ R +      
Sbjct: 8   LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHP--HI 65

Query: 159 VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           +++       +H  +  E M G S+   L K  Y  F   ++     QLL  ++++H+ +
Sbjct: 66  IRMLGATCEDSHFNLFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQ 123

Query: 218 LIHTDLKPENILFVSP-EYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           +IH D+K  N+L  S  + L+I D+   AR                      G+  ++ Q
Sbjct: 124 IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT----------------GAGEFQGQ 167

Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERV 336
               ++ T  + APEV+ G  +   CD+WSVGC++IE+ + +  +   ++  HLA++ ++
Sbjct: 168 ----LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKI 223

Query: 337 LG-----PIPQHM 344
                   IP+H+
Sbjct: 224 ASATTAPSIPEHL 236

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 88.2 bits (218), Expect = 3e-19
 Identities = 93/346 (26%), Positives = 147/346 (42%), Gaps = 68/346 (19%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           RY+ L+ IG G  G V    D      VAIK +    + +  A      L L+K      
Sbjct: 18  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 71

Query: 156 SRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
             CV  +N     N             + +V E++  +L   ++         + +  + 
Sbjct: 72  --CVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLL 125

Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T              
Sbjct: 126 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS------------- 172

Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
               F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF  
Sbjct: 173 ----FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220

Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
            + ++    ++E++  P P+ M     K  +  VR    + P+ A         L  P+L
Sbjct: 221 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 267

Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
              +L     +H+   A    DLL  +L  DP+ R++  +AL+HP+
Sbjct: 268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 86.7 bits (215), Expect = 3e-19
 Identities = 86/343 (25%), Positives = 133/343 (38%), Gaps = 83/343 (24%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA--MTEIDVLELL 148
            N    ++I+ ++G+G FG+V     +ETG   A K+++ I+   E    M EID+L   
Sbjct: 1   VNPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQ-IESEEELEDFMVEIDILSEC 59

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
           K         V +   + Y N + I+ E       D +     R      +R + RQ+LE
Sbjct: 60  KH-----PNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLE 114

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + F+H  ++IH DLK  NIL      +K+ D+ V+A++                     
Sbjct: 115 ALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKN--------------------- 153

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEALFQT 323
                  Q+ +  + T ++ APEV+         + Y  D+WS+G  LIEL   E     
Sbjct: 154 ---KSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEP---P 207

Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
           H  L  +    RVL  I +      + P         LD P   +S              
Sbjct: 208 HHELNPM----RVLLKILKS-----EPPT--------LDQPSKWSSS------------- 237

Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                          D L+  L  DP  R TA + LKHPF + 
Sbjct: 238 -------------FNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 87.8 bits (217), Expect = 4e-19
 Identities = 97/364 (26%), Positives = 154/364 (42%), Gaps = 63/364 (17%)

Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK 133
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +    +
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62

Query: 134 YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN------------HICIVFEMLGPS 181
            +  A      L L+K        CV  +N     N             + IV E++  +
Sbjct: 63  NQTHAKRAYRELVLMK--------CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN 114

Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 115 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170

Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T                  F  T Y        V TR+YRAPEVILG+G+   
Sbjct: 171 GLARTAGTS-----------------FMMTPY--------VVTRYYRAPEVILGMGYKEN 205

Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+  G  LF   ++++    ++E++  P P+ M     K  +  VR   
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM-----KKLQPTVRTYV 260

Query: 361 LDWPEGAT-SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
            + P+ A  S E +   +  P       +H    A    DLL  +L  D S R++  +AL
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEAL 316

Query: 420 KHPF 423
           +HP+
Sbjct: 317 QHPY 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 87.4 bits (217), Expect = 5e-19
 Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 33/245 (13%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAA-MTEIDVLELLKR 150
             +++++ IG G FG+V    D++TG+  A+KV+R    IK+ + A    E D+L     
Sbjct: 1   DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDIL----- 55

Query: 151 YDRSGSRCVQIRN-W-------FDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVRE 201
                       + W       F    H+ +V E M G  L + L       FP +  R 
Sbjct: 56  --------ADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLL--IRKDVFPEETARF 105

Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP-TDVNYYKRLPKS 260
              +L+  +  +H L  IH D+KP+NIL  +  ++K+ D+ +  +        Y      
Sbjct: 106 YIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSH 165

Query: 261 SAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
           + +   +      +H++     N  V T  Y APEV+ G  +   CD WS+G IL E+  
Sbjct: 166 NLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLY 225

Query: 317 GEALF 321
           G   F
Sbjct: 226 GFPPF 230

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 83.9 bits (208), Expect = 3e-18
 Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 44/240 (18%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
             Y+++++IG GT+G V    D  TGE VAIKV+          +   D  E++++    
Sbjct: 3   EDYELIQRIGSGTYGDVYKARDIATGELVAIKVI---------KLEPGDDFEIIQQEISM 53

Query: 155 GSRC-----VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
              C     V     +  R+ + IV E   G SL D  +     P     +  + R+ L+
Sbjct: 54  LKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLK 112

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H+   IH D+K  NIL      +K+ D+ V+A+    +   KR            
Sbjct: 113 GLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA--KR------------ 158

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILIELCSGE-ALFQTH 324
                        + T ++ APEV       G+   CD+W++G   IEL   +  +F  H
Sbjct: 159 ----------KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 83.5 bits (206), Expect = 5e-18
 Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 35/228 (15%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSG 155
           ++I+ ++G+G FG+V    ++ETG   A KV+ +  +   E  M EID+L          
Sbjct: 7   WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDH----- 61

Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              V++ + F Y N++ I+ E       D +     RP     +R + +Q LE + ++H+
Sbjct: 62  PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHE 121

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
            ++IH DLK  NILF     +K+ D+ V+A++   +                        
Sbjct: 122 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI------------------------ 157

Query: 276 QEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGE 318
           Q  +  + T ++ APEV++        + Y  D+WS+G  LIE+   E
Sbjct: 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIE 205

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 81.6 bits (202), Expect = 2e-17
 Identities = 75/345 (21%), Positives = 122/345 (35%), Gaps = 93/345 (26%)

Query: 95  SRYKILRKIGEGTFGQVLD--CLDRETGETVAIKVVR------SIKKYRE--AAMTEIDV 144
             Y+++  IG G    V    CL     E VAIK +       S+ + R+   AM++ + 
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPN--NEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNH 58

Query: 145 LELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLR-KNNYRPFPVDLVREI 202
             ++K Y    S        F   + + +V   L G SL D ++           ++  +
Sbjct: 59  PNVVKYY---TS--------FVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATV 107

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA--RSPTDVNYYKRLPKS 260
            +++L+ + ++H    IH D+K  NIL      +KI D+ V+A      D     R    
Sbjct: 108 LKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVR---- 163

Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVI-LGLGWSYPCDMWSVGCILIELCSGEA 319
                                V T  + APEV+    G+ +  D+WS G   IEL +G A
Sbjct: 164 ------------------KTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAA 205

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            +  +  ++   +M  +    P        K   K  R                      
Sbjct: 206 PYSKYPPMK--VLMLTLQNDPPSLETGADYKKYSKSFR---------------------- 241

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                               ++   L+ DPS R TA + LKH FF
Sbjct: 242 -------------------KMISLCLQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 80.8 bits (199), Expect = 3e-17
 Identities = 86/335 (25%), Positives = 130/335 (38%), Gaps = 83/335 (24%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
           RY + +++G+G+FG V    D++      +KV++ I        E      +  +LL + 
Sbjct: 1   RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEA-QLLSKL 59

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
           D      V+    F  R+  CI+ E   G  L   L   K+  +    + V E   QLL 
Sbjct: 60  DHPA--IVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLL 117

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V +MH  R++H DLK +NI F+    LKI D+ V+           RL   S     D 
Sbjct: 118 GVHYMHQRRILHRDLKAKNI-FLKNNLLKIGDFGVS-----------RLLMGSC----DL 161

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
            +T            T +Y +PE +   G+    D+WS+GCIL E+C     F+    L 
Sbjct: 162 ATT---------FTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS 212

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
              ++  V GP P                      PE               R  N +MQ
Sbjct: 213 --VVLRIVEGPTPS--------------------LPE------------TYSRQLNSIMQ 238

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                          +L  DPS R +A + L++PF
Sbjct: 239 S--------------MLNKDPSLRPSAAEILRNPF 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 79.7 bits (197), Expect = 8e-17
 Identities = 80/337 (23%), Positives = 123/337 (36%), Gaps = 90/337 (26%)

Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRSGSR 157
           L ++G G  G V   L R TG+ +A+K +R    +  ++  + E+D+L            
Sbjct: 6   LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILH--------KCN 57

Query: 158 C---VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               V     F     I I  E M G SL   L K      P  ++ +I   +L+ + ++
Sbjct: 58  SPYIVGFYGAFYNNGDISICMEYMDGGSLDKIL-KEVQGRIPERILGKIAVAVLKGLTYL 116

Query: 214 H-DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-ST 271
           H   ++IH D+KP NIL             V +R                IK+ DFG S 
Sbjct: 117 HEKHKIIHRDVKPSNIL-------------VNSR--------------GQIKLCDFGVSG 149

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
              +      V T  Y APE I G  +S   D+WS+G  LIEL +G              
Sbjct: 150 QLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF------------ 197

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL--PRLQNLVMQH 389
                  P P       + P +                 E ++ ++    PRL +     
Sbjct: 198 -------PYPPE-----NDPPD--------------GIFELLQYIVNEPPPRLPS----- 226

Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
               +    D +   L  DP  R +  + L+HPF  +
Sbjct: 227 -GKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 79.8 bits (197), Expect = 8e-17
 Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 46/230 (20%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLELLKRYD 152
           +KI +KIG+G F  V   +    G  VA+K V+       K R+  + EID   LLK+ D
Sbjct: 4   FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEID---LLKQLD 60

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLR-----KNNYRPFPVDLVREIGRQLL 207
                 ++    F   N + IV E+      D  R     K   R  P   + +   QL 
Sbjct: 61  HP--NVIKYLASFIENNELNIVLELADAG--DLSRMIKHFKKQKRLIPERTIWKYFVQLC 116

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             +  MH  R++H D+KP N+              +TA              +  +K+ D
Sbjct: 117 SALEHMHSKRIMHRDIKPANVF-------------ITA--------------TGVVKLGD 149

Query: 268 FGSTAY---EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
            G   +   +    + +V T +Y +PE I   G+++  D+WS+GC+L E+
Sbjct: 150 LGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 80.5 bits (199), Expect = 1e-16
 Identities = 73/245 (29%), Positives = 109/245 (44%), Gaps = 47/245 (19%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREA--AMTEIDVLELLKRYD 152
           ++IL ++G+G +GQV     ++TGE VA+K +    + K  E    +TE D+L   K   
Sbjct: 3   FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK--- 59

Query: 153 RSGSR-CVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
              S   V++   F    ++ +  E + G      L  NN      D  R    ++ E V
Sbjct: 60  ---SEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLL--NNLGVLSEDHARFYMAEMFEAV 114

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
             +H+L  IH DLKPEN L                           +  S  IK+ DFG 
Sbjct: 115 DALHELGYIHRDLKPENFL---------------------------IDASGHIKLTDFGL 147

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LC-----SGEALFQTH 324
           +       N +V +  Y APEV+ G G+ +  D WS+GC+L E LC     SG    +T 
Sbjct: 148 SKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW 207

Query: 325 ENLEH 329
           ENL++
Sbjct: 208 ENLKY 212

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 78.7 bits (194), Expect = 1e-16
 Identities = 67/255 (26%), Positives = 110/255 (43%), Gaps = 38/255 (14%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLKRYD 152
           +Y+ +R +G G FG V  C  +   + V IK +   +  K  R AA  E  VL+LL    
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL---- 56

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
            S    ++    F     + IV E   G +L ++++K        D +     Q+L  + 
Sbjct: 57  -SHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALH 115

Query: 212 FMHDLRLIHTDLKPENILFVSPE-YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            +H   ++H DLK +NIL    +  +KI D+ ++                   K++   S
Sbjct: 116 HVHTKLILHRDLKTQNILLDKHKMVVKIGDFGIS-------------------KILSSKS 156

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
            AY       +V T  Y +PE+  G  ++   D+W++GC+L EL S +  F+   NL  L
Sbjct: 157 KAYT------VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA-ANLPAL 209

Query: 331 AM--MERVLGPIPQH 343
            +  M     PI   
Sbjct: 210 VLKIMSGTFAPISDR 224

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 78.7 bits (194), Expect = 2e-16
 Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 34/251 (13%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLKRYDR 153
           ++IL KIG+G+FG V   + +      A+K +   +  ++ RE A+ E  VL  L     
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL----- 56

Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
             S  ++    F  +  + IV E      L+  L+    RP P D V     Q+L  +A 
Sbjct: 57  DSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAH 116

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H  +++H D+K  N+   + + +KI D  V A+  +D   +                  
Sbjct: 117 LHSKKILHRDIKSLNLFLDAYDNVKIGDLGV-AKLLSDNTNFANT--------------- 160

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT-HENLEHLA 331
                   IV T +Y +PE+     ++   D+W++G +L E C+G+  F   ++    L 
Sbjct: 161 --------IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK 212

Query: 332 MMERVLGPIPQ 342
           ++  V  P+ Q
Sbjct: 213 IIRGVFPPVSQ 223

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 78.3 bits (193), Expect = 2e-16
 Identities = 66/294 (22%), Positives = 124/294 (42%), Gaps = 49/294 (16%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK---VVRSIKKYREAAMTEIDVLELLKRYD 152
           +Y  ++KIGEG+FG+ +    +E G+   IK   + +   K RE +  E+ VL  +K   
Sbjct: 1   KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH-- 58

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 VQ +  F+   ++ IV +   G  LY  +       FP D + +   Q+   + 
Sbjct: 59  ---PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALK 115

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
            +HD +++H D+K +NI                            L K   IK+ DFG  
Sbjct: 116 HVHDRKILHRDIKSQNIF---------------------------LTKDGTIKLGDFGIA 148

Query: 272 AYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
              +         + T +Y +PE+     ++   D+W++GC+L E+C+ +  F+   N++
Sbjct: 149 RVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-NMK 207

Query: 329 HLAM--MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
           +L +  +     P+  H    +     +  +R   D       R S+ ++L+  
Sbjct: 208 NLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRD-------RPSVNSILEKN 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 79.1 bits (195), Expect = 2e-16
 Identities = 81/347 (23%), Positives = 133/347 (38%), Gaps = 90/347 (25%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYD 152
           ++ ++ I  G +G V     +ET +  A+K +      ++   +    E D+L   +   
Sbjct: 3   FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPF 62

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                C      F+ + H+C+V E + G      L+  N    PVD+ R    + +  + 
Sbjct: 63  VVSMFCS-----FETKRHLCMVMEYVEGGDCATLLK--NIGALPVDMARMYFAETVLALE 115

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H+  ++H DLKP+N+L  S  ++K+ D+ +                 S I ++   + 
Sbjct: 116 YLHNYGIVHRDLKPDNLLITSMGHIKLTDFGL-----------------SKIGLMSLTTN 158

Query: 272 AYEHQ--------EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
            YE              +  T  Y APEVIL  G+  P D W++G IL E   G   F  
Sbjct: 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPF-- 216

Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKF--VRRGRLDWPEGATSRESIKAVLKLPR 381
                         G          D P E F  V    ++WPEG    E++ A  +   
Sbjct: 217 -------------FG----------DTPEELFGQVISDDIEWPEG---DEALPADAQ--- 247

Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRL---TAHDALKHPFFT 425
                            DL+  LLR +P  RL    A +  +H FF 
Sbjct: 248 -----------------DLISRLLRQNPLERLGTGGAFEVKQHRFFL 277

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 77.7 bits (192), Expect = 5e-16
 Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 68/261 (26%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR--- 150
           T  ++++  IGEGT+G+V     ++TG+ VAIK++  I+   E    E ++L        
Sbjct: 5   TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPN 64

Query: 151 -------YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDF---LRKNNYRPFPVDLV 199
                  + +        + W         V E+  G S+ D    LRK   +    + +
Sbjct: 65  IATFYGAFIKKNPPGNDDQLWL--------VMELCGGGSVTDLVKGLRKKG-KRLKEEWI 115

Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
             I R+ L  +A++H+ ++IH D+K +NIL                           L K
Sbjct: 116 AYILRETLRGLAYLHENKVIHRDIKGQNIL---------------------------LTK 148

Query: 260 SSAIKVIDFGSTA---YEHQEHNYIVSTRHYRAPEVIL---GLGWSYP--CDMWSVGCIL 311
           ++ +K++DFG +A         N  + T ++ APEVI        SY    D+WS+G   
Sbjct: 149 NAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITA 208

Query: 312 IELCSGE----------ALFQ 322
           IEL  G+          ALF+
Sbjct: 209 IELADGKPPLCDMHPMRALFK 229

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 76.7 bits (189), Expect = 6e-16
 Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 55/235 (23%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLKRYD 152
            Y  +R +G+G FG+       E    V  K V   R  +K R  A+ EI +L LL    
Sbjct: 1   HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL---- 56

Query: 153 RSGSRCVQIRNWFDYRNHI----CIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                  Q  N   Y NH      ++ EM    G +LYD + +   + F  ++V     Q
Sbjct: 57  -------QHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQ 109

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           ++  V+++H   ++H D+K  NI                            L K+  IK+
Sbjct: 110 IVSAVSYIHKAGILHRDIKTLNIF---------------------------LTKAGLIKL 142

Query: 266 IDFG-----STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
            DFG      + Y   E   +V T +Y +PE+  G+ +++  D+W++GC+L EL 
Sbjct: 143 GDFGISKILGSEYSMAET--VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 76.4 bits (188), Expect = 1e-15
 Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 34/225 (15%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVR----SIK-KYREAAMTEIDVLE----LLKRYDR 153
           IG G+FG V   ++  +GE +A+K V     S   K R+ +M  +D L     LLK  + 
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSM--LDALAREIALLK--EL 63

Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                VQ        +H+ I  E + G S+   L  NNY  F   LVR   RQ+L+ + +
Sbjct: 64  QHENIVQYLGSSLDADHLNIFLEYVPGGSVAALL--NNYGAFEETLVRNFVRQILKGLNY 121

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H+  +IH D+K  NIL  +   +KI D+ ++          K+L  +S        ST 
Sbjct: 122 LHNRGIIHRDIKGANILVDNKGGIKISDFGIS----------KKLEANSL-------STK 164

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +   S   + APEV+    ++   D+WS+GC+++E+ +G
Sbjct: 165 TNGARPSLQGSV-FWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 76.4 bits (188), Expect = 1e-15
 Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 37/228 (16%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRSG 155
           + +  +G G  G V       TG  +A KVV   +    R+  + E+ ++     ++   
Sbjct: 8   ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIM-----HECRS 62

Query: 156 SRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V     F   N+IC+  E M   SL    +K    P PV+++ +I   ++E + +++
Sbjct: 63  PYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLY 120

Query: 215 D-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           +  R++H D+KP NIL  S   +K+ D+ V+                   ++I+  S A 
Sbjct: 121 NVHRIMHRDIKPSNILVNSRGQIKLCDFGVSG------------------ELIN--SIA- 159

Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
                +  V T  Y +PE I G  ++   D+WS+G  +IEL  G+  F
Sbjct: 160 -----DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPF 202

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 76.6 bits (188), Expect = 1e-15
 Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 35/228 (15%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSG 155
           ++I+ ++G+G FG+V    ++ETG   A KV+ +  +   E  M EI++L          
Sbjct: 14  WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNH----- 68

Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              V++   F +   + I+ E       D +     R      ++ I RQ+LE + ++H 
Sbjct: 69  PYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHS 128

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
           +++IH DLK  N+L      +K+ D+ V+A++               +K +         
Sbjct: 129 MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKN---------------VKTL--------- 164

Query: 276 QEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGE 318
           Q  +  + T ++ APEV++        + Y  D+WS+G  LIE+   E
Sbjct: 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 212

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 77.5 bits (190), Expect = 4e-15
 Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 52/269 (19%)

Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMT-EIDVLE 146
           GE+  + Y++++KIG G FG+V     + T E    K +  R +K+  ++ +  E++V+ 
Sbjct: 8   GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMR 67

Query: 147 LLK---------RYDRSGSRCVQIRNWF----DYRNHICIVFEMLGPSLYDFLRKNNYRP 193
            LK         R+    ++ + I   F    D   +I   ++M G              
Sbjct: 68  ELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGK------------- 114

Query: 194 FPVDLVREIGRQLLECVAFMHDL-------RLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
                + +I RQLL  +A+ H+L       R++H DLKP+NI F+S     I   K+TA+
Sbjct: 115 IEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNI-FLSTGIRHIG--KITAQ 171

Query: 247 SPTDVNYYKRLPKSSAIKVIDFG---STAYEHQEHNYIVSTRHYRAPEVILGLGWSY--P 301
           +         L      K+ DFG   +   E   H+  V T +Y +PE++L    SY   
Sbjct: 172 A-------NNLNGRPIAKIGDFGLSKNIGIESMAHS-CVGTPYYWSPELLLHETKSYDDK 223

Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL 330
            DMW++GCI+ ELCSG+  F    N   L
Sbjct: 224 SDMWALGCIIYELCSGKTPFHKANNFSQL 252

Length = 1021

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 74.3 bits (182), Expect = 5e-15
 Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 31/224 (13%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV------RSIKKYREAAMTEIDVLELLKR 150
           +++ + +G G FG+V  C D +TG  +A+K V      +   K   A   EI +L+ L R
Sbjct: 4   WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-R 62

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           +DR       +R+  + +  I + + M G S+ D L+   Y     ++ R   RQ+L+ V
Sbjct: 63  HDRIVQYYGCLRDPEEKKLSIFVEY-MPGGSIKDQLKA--YGALTENVTRRYTRQILQGV 119

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
           +++H   ++H D+K  NIL  S   +K+ D+  + R                I+ I    
Sbjct: 120 SYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKR----------------IQTICMSG 163

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
           T  +      +  T ++ +PEVI G G+    D+WSV C ++E+
Sbjct: 164 TGIKS-----VTGTPYWMSPEVISGEGYGRKADVWSVACTVVEM 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 73.9 bits (181), Expect = 6e-15
 Identities = 65/254 (25%), Positives = 110/254 (43%), Gaps = 37/254 (14%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +Y +LR +GEG+FG+ L      + +  A+K +R  K       +  + + L K      
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM---KH 57

Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V  +  F+   H+ IV E   G  L   ++    + FP D + +   Q+   V  +H
Sbjct: 58  PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH 117

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
           + R++H D+K +NI                            L ++  +K+ DFGS    
Sbjct: 118 EKRVLHRDIKSKNIF---------------------------LTQNGKVKLGDFGSARLL 150

Query: 275 HQEHNYI---VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH--ENLEH 329
                Y    V T +Y  PE+   + ++   D+WS+GCIL ELC+ +  FQ +  +NL  
Sbjct: 151 TSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLI- 209

Query: 330 LAMMERVLGPIPQH 343
           L + +    P+P H
Sbjct: 210 LKVCQGSYKPLPSH 223

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 73.7 bits (182), Expect = 1e-14
 Identities = 74/344 (21%), Positives = 134/344 (38%), Gaps = 105/344 (30%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLK--- 149
           ++ ++ +G G+FG+V+    + +G+  A+K++   K    K  E  + E  +L+ ++   
Sbjct: 3   FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPF 62

Query: 150 --RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
                 S         + D  N + +V E + G  L+  LRK+    FP  + R    Q+
Sbjct: 63  LVNLYGS---------FQDDSN-LYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQV 110

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           +  + ++H L +++ DLKPEN+L                    D + Y        IK+ 
Sbjct: 111 VLALEYLHSLDIVYRDLKPENLLL-------------------DSDGY--------IKIT 143

Query: 267 DFGSTAYEHQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           DFG      +   Y +  T  Y APE+IL  G+    D W++G ++ E+ +G   F    
Sbjct: 144 DFGFAKRV-KGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD- 201

Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
               + + E++L                     G++ +P                     
Sbjct: 202 --NPIQIYEKILE--------------------GKVRFP--------------------- 218

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
                   A    DL++ LL+ D + RL       +D   HP+F
Sbjct: 219 --SFFSPDA---KDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWF 257

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 74.3 bits (182), Expect = 1e-14
 Identities = 93/360 (25%), Positives = 148/360 (41%), Gaps = 87/360 (24%)

Query: 102 KIGEGTFGQVLDC------------LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
           K+G GT+G V               L +  G  +++   R I   RE  +   +V+ L K
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRE--LKHPNVIALQK 65

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRP--FPVDLVREIGRQLL 207
            +     R V +   FDY  H     ++     +    K N +P   P  +V+ +  Q+L
Sbjct: 66  VFLSHSDRKVWL--LFDYAEH-----DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQIL 118

Query: 208 ECVAFMHDLRLIHTDLKPENILFVS--PEY--LKIPDYKVTARSPTDVNYYKRLPKSSAI 263
           + + ++H   ++H DLKP NIL +   PE   +KI D             + RL  S   
Sbjct: 119 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG-----------FARLFNSPLK 167

Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ 322
            + D           + +V T  YRAPE++LG   ++   D+W++GCI  EL + E +F 
Sbjct: 168 PLADL----------DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF- 216

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDK----PAEKFVRRGRLDWPEGATSRESIKAVLK 378
            H   E +    +   P     L R+      PA+K       DW       E I+ + +
Sbjct: 217 -HCRQEDI----KTSNPFHHDQLDRIFSVMGFPADK-------DW-------EDIRKMPE 257

Query: 379 LPRLQN--------------LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            P LQ                + +H       +  LLQ LL  DP+ R+T+  AL+ P+F
Sbjct: 258 YPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 73.1 bits (179), Expect = 1e-14
 Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 33/227 (14%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLELLKR 150
           + +++ + +G+G FG+V  C D +TG  +A+K V+    S +  +E    E ++ +LLK 
Sbjct: 2   TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEI-QLLK- 59

Query: 151 YDRSGSRCVQIRNWF-DYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQLL 207
            +    R VQ      D       +F    P  S+ D L+  +Y     ++ R+  RQ+L
Sbjct: 60  -NLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLK--SYGALTENVTRKYTRQIL 116

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E V+++H   ++H D+K  NIL  S   +K+ D+  + R                ++ I 
Sbjct: 117 EGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKR----------------LQTIC 160

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
              T  +      +  T ++ +PEVI G G+    D+WSVGC ++E+
Sbjct: 161 LSGTGMKS-----VTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEM 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 72.4 bits (177), Expect = 3e-14
 Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 43/290 (14%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLELLKRYDRSGSRC 158
           +G+G FG+V  C D +TG  +A K V+    S +  +E +  E ++ +LLK       R 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEI-QLLKNLQHE--RI 66

Query: 159 VQIRNWFDYRNH----ICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
           VQ       R+     + I  E M G S+ D L+   Y      + R+  RQ+LE ++++
Sbjct: 67  VQYYGCL--RDRAEKTLTIFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYL 122

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H D+K  NIL  S   +K+ D+  + R                ++ I    T  
Sbjct: 123 HSNMIVHRDIKGANILRDSAGNVKLGDFGASKR----------------LQTICMSGTGI 166

Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
                  +  T ++ +PEVI G G+    D+WS+GC ++E+ + +  +  +E +   A+ 
Sbjct: 167 RS-----VTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA--AIF 219

Query: 334 ERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
           +    P    +   + + A  F+    ++    A  R S + +L+ P  Q
Sbjct: 220 KIATQPTNPQLPSHISEHARDFLGCIFVE----ARHRPSAEELLRHPFAQ 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 72.2 bits (178), Expect = 3e-14
 Identities = 56/235 (23%), Positives = 92/235 (39%), Gaps = 53/235 (22%)

Query: 98  KILRKIGEGTFGQV----LDCLDRETGETVAIKVVRSIKK-------YREAA-MTEID-- 143
            + +K+GEG FG+V    L          VA+K ++            REA  M ++D  
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 144 -VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVRE 201
            +++LL      G  C +          + IV E M G  L D+LRKN  +   +  +  
Sbjct: 62  NIVKLL------GV-CTE-------EEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLS 107

Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
              Q+   + ++     IH DL   N L      +KI D+ + +R   D +YYK      
Sbjct: 108 FALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGL-SRDLYDDDYYKVKGGKL 166

Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
            I+                      + APE +    ++   D+WS G +L E+ +
Sbjct: 167 PIR----------------------WMAPESLKEGKFTSKSDVWSFGVLLWEIFT 199

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 58/253 (22%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKR--- 150
           Y++L  IG+G+FG V     +  G+ +  K +       K ++  ++E+++L  LK    
Sbjct: 2   YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI 61

Query: 151 ---YDRSGSRCVQIRNWFDYRNH-ICIVFEML-GPSLYDFLRK--NNYRPFPVDLVREIG 203
              YDR            D  N  + IV E   G  L   ++K     +    + +  I 
Sbjct: 62  VRYYDRI----------IDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRIL 111

Query: 204 RQLLECVAFMHDL-----RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
            QLL  +   H+       ++H DLKP NI F+                  + N      
Sbjct: 112 TQLLLALYECHNRSDPGNTVLHRDLKPANI-FLD----------------ANNN------ 148

Query: 259 KSSAIKVIDFGSTAYEHQEHNY---IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
               +K+ DFG       + ++    V T +Y +PE +  + +    D+WS+GC++ ELC
Sbjct: 149 ----VKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELC 204

Query: 316 SGEALFQTHENLE 328
           +    F     L+
Sbjct: 205 ALSPPFTARNQLQ 217

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 72.2 bits (178), Expect = 3e-14
 Identities = 64/284 (22%), Positives = 104/284 (36%), Gaps = 68/284 (23%)

Query: 98  KILRKIGEGTFGQV----LDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
           ++ +K+GEG FG+V    L      T   VA+K ++  + ++ RE  + E     ++K+ 
Sbjct: 2   ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEA---SIMKKL 58

Query: 152 DRS------GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGR 204
                    G  C Q          + IV E M G  L DFLRK+  +    DL+ ++  
Sbjct: 59  SHPNIVRLLGV-CTQ-------GEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLL-QMAL 109

Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+ + + ++     +H DL   N L      +KI D+ ++     D  Y KR      IK
Sbjct: 110 QIAKGMEYLESKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIK 169

Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
                                 + APE +    ++   D+WS G +L E+ +        
Sbjct: 170 ----------------------WMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQ---- 203

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGAT 368
                         P P    + V    E      RL  PE   
Sbjct: 204 --------------PYPGMSNEEV---LELLEDGYRLPRPENCP 230

Length = 258

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 72.1 bits (177), Expect = 3e-14
 Identities = 74/339 (21%), Positives = 132/339 (38%), Gaps = 85/339 (25%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYR--EAAMTEIDVLELLKRYDRSGSRC 158
           +G+G FG+V  C  + TG+  A K +  + +KK +  + A+ E  +LE +     S    
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-----SSRFI 55

Query: 159 VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           V +   F+ ++ +C+V   M G  L   +       FP         Q++  +  +H  R
Sbjct: 56  VSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR 115

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +++ DLKPEN+L      ++I D  +            +  K  A               
Sbjct: 116 IVYRDLKPENVLLDDHGNVRISDLGLAVELKG-----GKKIKGRA--------------- 155

Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVL 337
                 T  Y APEV+ G  + +  D +++GC L E+ +G + F+  +            
Sbjct: 156 -----GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRK------------ 198

Query: 338 GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL 397
                   ++V+K   K               R +++  ++ P          D  +   
Sbjct: 199 --------EKVEKEELK---------------RRTLEMAVEYP----------DKFSPEA 225

Query: 398 IDLLQGLLRYDPSSRL-----TAHDALKHPFFTRDYYRR 431
            DL + LL+ DP  RL     +A +  +HP F    +RR
Sbjct: 226 KDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRR 264

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 71.4 bits (175), Expect = 6e-14
 Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 43/243 (17%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           +G+GT+G V    D  T   +AIK +     +Y +    EI +   LK  +      VQ 
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRN-----IVQY 70

Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPV--DLVREIGRQLLECVAFMHDLRL 218
                      I  E + G SL   LR + + P       +    +Q+LE + ++HD ++
Sbjct: 71  LGSDSENGFFKIFMEQVPGGSLSALLR-SKWGPLKDNEQTIIFYTKQILEGLKYLHDNQI 129

Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST---AYEH 275
           +H D+K +N+L                     VN Y     S  +K+ DFG++   A  +
Sbjct: 130 VHRDIKGDNVL---------------------VNTY-----SGVVKISDFGTSKRLAGIN 163

Query: 276 QEHNYIVSTRHYRAPEVI-LGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
                   T  Y APEVI  G  G+  P D+WS+GC ++E+ +G+  F   E  E  A M
Sbjct: 164 PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF--IELGEPQAAM 221

Query: 334 ERV 336
            +V
Sbjct: 222 FKV 224

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 71.1 bits (174), Expect = 7e-14
 Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 57/274 (20%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVR-------SIKKYREAAMTEIDVLELLKRYD--R 153
           +G+G +G V  C     G+ +A+K V        + +K  E    E+D+L+ LK  +  +
Sbjct: 8   LGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66

Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
               C+         N I I  E + G S+   L  N + P P  +  +  +Q+L+ VA+
Sbjct: 67  YLGTCLD-------DNTISIFMEFVPGGSISSIL--NRFGPLPEPVFCKYTKQILDGVAY 117

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST- 271
           +H+  ++H D+K  N++ +                P  +           IK+IDFG   
Sbjct: 118 LHNNCVVHRDIKGNNVMLM----------------PNGI-----------IKLIDFGCAR 150

Query: 272 ----AYEHQEHNYIVSTRH----YRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
                  H  H+ ++ + H    + APEVI   G+    D+WS+GC + E+ +G+    +
Sbjct: 151 RLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLAS 210

Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
            + L  +  +    G +P+ +       A  FV 
Sbjct: 211 MDRLAAMFYIGAHRGLMPR-LPDSFSAAAIDFVT 243

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 70.9 bits (174), Expect = 1e-13
 Identities = 77/324 (23%), Positives = 131/324 (40%), Gaps = 78/324 (24%)

Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           KIGEG+ G V    D+ TG  VA+K +   K+ R     E+   E++   D      V++
Sbjct: 26  KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHPNIVEM 81

Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
            + +   + + +V E L G +L D +          + +  +   +L+ ++F+H   +IH
Sbjct: 82  YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLAVLKALSFLHAQGVIH 138

Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K ++IL  S   +K+ D+   A+   +V   K L                       
Sbjct: 139 RDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSL----------------------- 175

Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
            V T ++ APEVI  L +    D+WS+G ++IE+  GE                      
Sbjct: 176 -VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGE---------------------- 212

Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
           P +     ++P  + ++R R + P     +   K     PRL+                 
Sbjct: 213 PPYF----NEPPLQAMKRIRDNLP--PKLKNLHKVS---PRLR---------------SF 248

Query: 401 LQGLLRYDPSSRLTAHDALKHPFF 424
           L  +L  DP+ R TA + L HPF 
Sbjct: 249 LDRMLVRDPAQRATAAELLNHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 70.5 bits (172), Expect = 1e-13
 Identities = 86/335 (25%), Positives = 128/335 (38%), Gaps = 93/335 (27%)

Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLE-----LLKRYD 152
           L +IG+G+FG+V   +D  T E VAIK++     +   E    EI VL       + RY 
Sbjct: 9   LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRY- 67

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
             GS     + W        I+ E LG  S  D L+     P     +  I R++L+ + 
Sbjct: 68  -YGSYLKGTKLW--------IIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLD 115

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H  R IH D+K  N+L      +K+ D+ V                         G  
Sbjct: 116 YLHSERKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQL 151

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
                + N  V T  + APEVI    + +  D+WS+G   IEL  GE     + +L  + 
Sbjct: 152 TDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEP---PNSDLHPM- 207

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
              RVL  IP+      + P                            P L+        
Sbjct: 208 ---RVLFLIPK------NSP----------------------------PTLEG------Q 224

Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           +S  +  + ++  L  DP  R TA + LKH F TR
Sbjct: 225 YSKPFK-EFVEACLNKDPRFRPTAKELLKHKFITR 258

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 70.9 bits (173), Expect = 2e-13
 Identities = 89/355 (25%), Positives = 146/355 (41%), Gaps = 77/355 (21%)

Query: 102 KIGEGTFGQVLDC------------LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
           K+G GT+G V               L +  G  +++   R I   RE  +   +V+ L K
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRE--LKHPNVISLQK 65

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRP--FPVDLVREIGRQLL 207
            +     R V +   FDY  H     ++     +    K N +P   P  +V+ +  Q+L
Sbjct: 66  VFLSHADRKVWL--LFDYAEH-----DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 118

Query: 208 ECVAFMHDLRLIHTDLKPENILFV--SPE--YLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
           + + ++H   ++H DLKP NIL +   PE   +KI D             + RL  S   
Sbjct: 119 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG-----------FARLFNSPLK 167

Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ 322
            + D           + +V T  YRAPE++LG   ++   D+W++GCI  EL + E +F 
Sbjct: 168 PLADL----------DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217

Query: 323 THE------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW------PEGAT-S 369
             +      N  H   ++R+   +          PA+K       DW      PE +T  
Sbjct: 218 CRQEDIKTSNPYHHDQLDRIFNVM--------GFPADK-------DWEDIKKMPEHSTLM 262

Query: 370 RESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           ++  +       L   + +H          LLQ LL  DP  R+T+  A++ P+F
Sbjct: 263 KDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 69.1 bits (170), Expect = 2e-13
 Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 54/235 (22%)

Query: 98  KILRKIGEGTFGQV----LDCLDRETGETVAIKVVRSIKK-------YREAA-MTEID-- 143
            + +K+GEG FG+V    L     +    VA+K ++            REA  M ++D  
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 144 -VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVRE 201
            V++LL      G  C +          + IV E M G  L  +LRKN  +    DL+  
Sbjct: 62  NVVKLL------GV-CTE-------EEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLL-S 106

Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
              Q+   + ++     IH DL   N L      +KI D+ + +R   D +YY++     
Sbjct: 107 FALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGL-SRDLYDDDYYRKRGGKL 165

Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
            I+                      + APE +    ++   D+WS G +L E+ +
Sbjct: 166 PIR----------------------WMAPESLKEGKFTSKSDVWSFGVLLWEIFT 198

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 69.3 bits (169), Expect = 3e-13
 Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 54/268 (20%)

Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLE------LLKRY 151
           L KIG+G+FG+V   +D  T + VAIK++     +   E    EI VL       + K Y
Sbjct: 9   LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 68

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVD--LVREIGRQLLE 208
              GS     + W        I+ E LG  S  D L      P P+D   +  I R++L+
Sbjct: 69  ---GSYLKDTKLW--------IIMEYLGGGSALDLLE-----PGPLDETQIATILREILK 112

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H  + IH D+K  N+L      +K+ D+ V                         
Sbjct: 113 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------ 148

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           G       + N  V T  + APEVI    +    D+WS+G   IEL  GE     H  L 
Sbjct: 149 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEP---PHSELH 205

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFV 356
            + ++  +    P  +     KP ++FV
Sbjct: 206 PMKVLFLIPKNNPPTLEGNYSKPLKEFV 233

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 69.8 bits (170), Expect = 3e-13
 Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 38/242 (15%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +Y    KIG+G  G V   +D  TG+ VAIK +      ++    E+ + E+L   +   
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQM----NLQQQPKKELIINEILVMRENKN 75

Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V   + +   + + +V E L G SL D + +          +  + R+ L+ + F+H
Sbjct: 76  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALDFLH 132

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
             ++IH D+K +NIL                           L    ++K+ DFG  A  
Sbjct: 133 SNQVIHRDIKSDNIL---------------------------LGMDGSVKLTDFGFCAQI 165

Query: 274 --EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
             E  + + +V T ++ APEV+    +    D+WS+G + IE+  GE  +     L  L 
Sbjct: 166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225

Query: 332 MM 333
           ++
Sbjct: 226 LI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 68.6 bits (167), Expect = 7e-13
 Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 38/242 (15%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +Y    KIG+G  G V   +D  TG+ VAI+ +      ++    E+ + E+L   +   
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM----NLQQQPKKELIINEILVMRENKN 76

Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V   + +   + + +V E L G SL D + +          +  + R+ L+ + F+H
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALEFLH 133

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
             ++IH D+K +NIL                           L    ++K+ DFG  A  
Sbjct: 134 SNQVIHRDIKSDNIL---------------------------LGMDGSVKLTDFGFCAQI 166

Query: 274 --EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
             E  + + +V T ++ APEV+    +    D+WS+G + IE+  GE  +     L  L 
Sbjct: 167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226

Query: 332 MM 333
           ++
Sbjct: 227 LI 228

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 68.5 bits (168), Expect = 1e-12
 Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 32/240 (13%)

Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAM-TEIDVLELLKRYDRSG 155
           ++ IG G FG+V     ++TG   A+K +R    ++K + A +  E D+L      +   
Sbjct: 6   IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILA-----EADN 60

Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   N++ ++ E L G  +   L K     F  +  R    + +  +  +H
Sbjct: 61  PWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIH 118

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKV-----TARSPTDVNYYKRLPKSSAIKVIDFG 269
            L  IH D+KP+N+L  +  ++K+ D+ +      +       +Y+ L  +     +DF 
Sbjct: 119 KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE---FYRILSHALPSNFLDFI 175

Query: 270 STAYEHQE--HNY----------IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S     +     +           V T  Y APEV L  G++  CD WS+G I+ E+  G
Sbjct: 176 SKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 67.4 bits (164), Expect = 1e-12
 Identities = 60/263 (22%), Positives = 112/263 (42%), Gaps = 37/263 (14%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMT--EIDVLELLKRYD 152
           ++  R +G+G FG+V  C  R TG+  A K +  + IKK +  +M   E  +LE      
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILE------ 55

Query: 153 RSGSR-CVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           +  SR  V +   ++ ++ +C+V  ++ G  L   +       F          ++   +
Sbjct: 56  KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGL 115

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
             +H  R+++ DLKPENIL     +++I D  +    P       R              
Sbjct: 116 EDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR-------------- 161

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
                      V T  Y APEV+    +++  D W++GC+L E+ +G++ FQ  +     
Sbjct: 162 -----------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 210

Query: 331 AMMERVLGPIPQHMLKRVDKPAE 353
             +ER++  + +   ++    A 
Sbjct: 211 EEVERLVKEVQEEYSEKFSPDAR 233

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 67.4 bits (164), Expect = 2e-12
 Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 46/246 (18%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-YREAAMTEIDVLELLKRYDRS 154
           +Y    KIG+G  G V   +D  TG+ VAIK +   K+  +E  + EI V++ LK  +  
Sbjct: 20  KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPN-- 77

Query: 155 GSRCVQIRNWFDYR---NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 I N+ D     + + +V E L G SL D + +       +  V    R+ L+ +
Sbjct: 78  ------IVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAV---CRECLQAL 128

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            F+H  ++IH D+K +N+L                           L    ++K+ DFG 
Sbjct: 129 EFLHANQVIHRDIKSDNVL---------------------------LGMDGSVKLTDFGF 161

Query: 271 TAY---EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
            A    E  + + +V T ++ APEV+    +    D+WS+G + IE+  GE  +     L
Sbjct: 162 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL 221

Query: 328 EHLAMM 333
             L ++
Sbjct: 222 RALYLI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 67.3 bits (164), Expect = 2e-12
 Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 58/242 (23%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++++  +G GT+GQV      +TG+  AIKV+   +   E    EI+   +LK+Y     
Sbjct: 18  FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEIN---MLKKYSHH-- 72

Query: 157 RCVQIRNWFDY------------RNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIG 203
                RN   Y             + + +V E  G  S+ D ++         D +  I 
Sbjct: 73  -----RNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYIC 127

Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
           R++L  +A +H  ++IH D+K +N+L                           L +++ +
Sbjct: 128 REILRGLAHLHAHKVIHRDIKGQNVL---------------------------LTENAEV 160

Query: 264 KVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELC 315
           K++DFG +A   +     N  + T ++ APEVI         + Y  D+WS+G   IE+ 
Sbjct: 161 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMA 220

Query: 316 SG 317
            G
Sbjct: 221 EG 222

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 67.7 bits (165), Expect = 2e-12
 Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 47/265 (17%)

Query: 97  YKILRKIGEGTFGQV-LDCLDRETGETVAIKVVRSIKKYREAAM----TEIDVLELLKRY 151
           +  +R +G G+FG+V L     E    VAIK     K  ++  +    +E  +L  +   
Sbjct: 32  FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH- 90

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 CV +   F   +++ +V E ++G   + FLR+N  + FP D+      Q++   
Sbjct: 91  ----PFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIF 144

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++  L +++ DLKPEN+L                           L K   IK+ DFG 
Sbjct: 145 EYLQSLNIVYRDLKPENLL---------------------------LDKDGFIKMTDFGF 177

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG-------EALFQT 323
                     +  T  Y APE++L +G     D W++G  + E+  G       E L   
Sbjct: 178 AKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIY 237

Query: 324 HENLEHLAMMERVLGPIPQHMLKRV 348
            + LE +    + L    +H++K++
Sbjct: 238 QKILEGIIYFPKFLDNNCKHLMKKL 262

Length = 340

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 67.0 bits (164), Expect = 2e-12
 Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 38/229 (16%)

Query: 98  KILRKIGEGTFGQV----LDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
           K ++++GEG FG+V     D L   TGE VA+K +     +++R     EI++L  L   
Sbjct: 7   KFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL--- 63

Query: 152 DRSGSRCVQIRNWFD--YRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  V+ +   +      + ++ E L   SL D+L+++  +     L+     Q+ +
Sbjct: 64  --DHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLL-FSSQICK 120

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVID 267
            + ++   R IH DL   NIL  S + +KI D+ +    P D +YY  + P  S I    
Sbjct: 121 GMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIF--- 177

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                              + APE +    +S   D+WS G  L EL +
Sbjct: 178 -------------------WYAPECLRTSKFSSASDVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 67.4 bits (164), Expect = 2e-12
 Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 78/324 (24%)

Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           KIGEG+ G V    ++ TG+ VA+K +   K+ R     E+   E++   D      V +
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR----ELLFNEVVIMRDYHHENVVDM 84

Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
            N +   + + +V E L G +L D +          + +  +   +L  ++++H+  +IH
Sbjct: 85  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHNQGVIH 141

Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K ++IL  S   +K+ D+   A+        K +PK  ++                 
Sbjct: 142 RDIKSDSILLTSDGRIKLSDFGFCAQVS------KEVPKRKSL----------------- 178

Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
            V T ++ APEVI  L +    D+WS+G ++IE+  GE  +                   
Sbjct: 179 -VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY------------------- 218

Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
                   ++P  + +RR R + P        + +VL+                G+L DL
Sbjct: 219 -------FNEPPLQAMRRIRDNLPPRVKDSHKVSSVLR----------------GFL-DL 254

Query: 401 LQGLLRYDPSSRLTAHDALKHPFF 424
           +  L+R +PS R TA + L+HPF 
Sbjct: 255 M--LVR-EPSQRATAQELLQHPFL 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 67.0 bits (163), Expect = 2e-12
 Identities = 77/326 (23%), Positives = 132/326 (40%), Gaps = 78/326 (23%)

Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           KIGEG+ G V     + +G+ VA+K +   K+ R     E+   E++   D      V++
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 82

Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 83  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLKALSVLHAQGVIH 139

Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K ++IL      +K+ D+   A+   +V   K L                       
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL----------------------- 176

Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
            V T ++ APE+I  L +    D+WS+G ++IE+  GE  +                   
Sbjct: 177 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY------------------- 216

Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
                   ++P  K ++  R + P               P+L+NL    V  S   L   
Sbjct: 217 -------FNEPPLKAMKMIRDNLP---------------PKLKNL--HKVSPS---LKGF 249

Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
           L  LL  DP+ R TA + LKHPF  +
Sbjct: 250 LDRLLVRDPAQRATAAELLKHPFLAK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 66.7 bits (163), Expect = 2e-12
 Identities = 59/254 (23%), Positives = 101/254 (39%), Gaps = 57/254 (22%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKV---------VRSIKKYREAAMTEIDVL 145
           S Y+ L  IG G +G V       TG  VA+K+         V  I++       E+ +L
Sbjct: 1   SLYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQR-------EVALL 53

Query: 146 ELLKRYDRSGSRCVQIRNWFDYRN--HICIVFEML-GPSLYDFLRKNNYRPFPVD--LVR 200
             L++           + +  Y     + I+ E   G S+   ++       P+    + 
Sbjct: 54  SQLRQSQPPNI----TKYYGSYLKGPRLWIIMEYAEGGSVRTLMK-----AGPIAEKYIS 104

Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
            I R++L  + ++H + +IH D+K  NIL  +   +K+ D+ V A           L   
Sbjct: 105 VIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAA-----------LLNQ 153

Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEA 319
           ++ K   F  T Y             + APEVI  G  +    D+WS+G  + E+ +G  
Sbjct: 154 NSSKRSTFVGTPY-------------WMAPEVITEGKYYDTKADIWSLGITIYEMATGNP 200

Query: 320 LFQTHENLEHLAMM 333
            +   +     AMM
Sbjct: 201 PYSDVD--AFRAMM 212

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 67.4 bits (164), Expect = 2e-12
 Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 38/244 (15%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYDRSGSRC 158
           +G+GTFG+V+   ++ +G+  A+K+++    I K   A  +TE  VL+     +      
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLK-----NTRHPFL 57

Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
             ++  F  ++ +C V E + G  L+  L +   R F  D  R  G +++  + ++H  +
Sbjct: 58  TSLKYSFQTKDRLCFVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGK 115

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +++ DLK EN++     ++KI D+ +     TD    K                      
Sbjct: 116 IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF-------------------- 155

Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEHLAMMER 335
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 156 ----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED 211

Query: 336 VLGP 339
           +  P
Sbjct: 212 IKFP 215

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 66.1 bits (161), Expect = 3e-12
 Identities = 73/295 (24%), Positives = 125/295 (42%), Gaps = 46/295 (15%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYD 152
           RY+I++KIGEG+FG++     +   E   IK +   K   K +EA+  E+ +L  +K   
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKH-- 58

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 V     F     + IV E   G  L   + +     F  D +     Q+   + 
Sbjct: 59  ---PNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLK 115

Query: 212 FMHDLRLIHTDLKPENILFVSPEYL--KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
            +HD +++H D+K +NI F+S   +  K+ D+   AR   D               ++  
Sbjct: 116 HIHDRKILHRDIKSQNI-FLSKNGMVAKLGDFG-IARQLND--------------SMELA 159

Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
            T          V T +Y +PE+     ++   D+WS+GC+L ELC+ +  F+ + NL  
Sbjct: 160 YTC---------VGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-NLHQ 209

Query: 330 LAMM--ERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
           L +   +    PI  +  + +     +  +    D P       SI ++LK P L
Sbjct: 210 LVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRP-------SITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 66.5 bits (162), Expect = 3e-12
 Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 46/231 (19%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYDRS 154
           +Y    KIG+G  G V   +D  TG+ VAIK +    +  +E  + EI V+   K  +  
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPN-- 77

Query: 155 GSRCVQIRNWFD---YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 I N+ D     + + +V E L G SL D + +          +  + R+ L+ +
Sbjct: 78  ------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQAL 128

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            F+H  ++IH D+K +NIL                           L    ++K+ DFG 
Sbjct: 129 EFLHSNQVIHRDIKSDNIL---------------------------LGMDGSVKLTDFGF 161

Query: 271 TAY---EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
            A    E  + + +V T ++ APEV+    +    D+WS+G + IE+  GE
Sbjct: 162 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 66.3 bits (161), Expect = 4e-12
 Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 50/276 (18%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++++  +G GT+GQV      +TG+  AIKV+       E    EI+   +LK+Y  S  
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEIN---MLKKY--SHH 62

Query: 157 RCVQI-------RNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLE 208
           R +         +N     + + +V E  G  S+ D ++         + +  I R++L 
Sbjct: 63  RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR 122

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            ++ +H  ++IH D+K +N+L                           L +++ +K++DF
Sbjct: 123 GLSHLHQHKVIHRDIKGQNVL---------------------------LTENAEVKLVDF 155

Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEAL 320
           G +A   +     N  + T ++ APEVI         + +  D+WS+G   IE+  G   
Sbjct: 156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 215

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFV 356
                 +  L ++ R   P P+   K+  K  + F+
Sbjct: 216 LCDMHPMRALFLIPR--NPAPRLKSKKWSKKFQSFI 249

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 66.8 bits (163), Expect = 4e-12
 Identities = 58/245 (23%), Positives = 104/245 (42%), Gaps = 35/245 (14%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT----EIDVLELLKRYD 152
           +  ++ IG+G FG+V     ++TG+  A+K +   + +++  +     E DVL      +
Sbjct: 3   FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLA-----E 57

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 V +   F    ++ ++ E L G  L   L K  Y  F  D+ R    + +  + 
Sbjct: 58  SDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIE 115

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA--RSPTDVNYYKRLPKSSAIKVIDFG 269
            +H L  IH D+KP+NIL     ++K+ D+ ++       D  YY++L +  + K     
Sbjct: 116 AVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDN 175

Query: 270 STAYEHQEHNYIVSTRH---------------------YRAPEVILGLGWSYPCDMWSVG 308
             +      N  +S++                      Y APE+ L  G+   CD WS+G
Sbjct: 176 RNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235

Query: 309 CILIE 313
            I+ E
Sbjct: 236 AIMFE 240

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 66.0 bits (161), Expect = 6e-12
 Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 38/244 (15%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAA--MTEIDVLELLKRYDRSGSRC 158
           +G+GTFG+V+   ++ TG+  A+K+++   I    E A  +TE  VL+  +         
Sbjct: 3   LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH-----PFL 57

Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
             ++  F   + +C V E   G  L+  L +   R F  D  R  G +++  + ++H   
Sbjct: 58  TALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCD 115

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +++ DLK EN++     ++KI D+ +                      I  G+T      
Sbjct: 116 VVYRDLKLENLMLDKDGHIKITDFGLCKEG------------------ISDGATM----- 152

Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEHLAMMER 335
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 153 -KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 211

Query: 336 VLGP 339
           +  P
Sbjct: 212 IRFP 215

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 64.6 bits (158), Expect = 9e-12
 Identities = 70/336 (20%), Positives = 117/336 (34%), Gaps = 87/336 (25%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAA--MTEIDVLELLKRYD 152
           +++LR IG+G FG+V     R+T +  A+K +   K  +       + E  +L+ L    
Sbjct: 2   FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNH-- 59

Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSL-YDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 V +   F    ++ +V + +LG  L Y   +K     F  + V+    +++  +
Sbjct: 60  ---PFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLAL 113

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H   +IH D+KP+NIL     ++ I D+ +  +   D                   +
Sbjct: 114 EYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL-----------------T 156

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
           T+           T  Y APEV+   G+S   D WS+G    E                 
Sbjct: 157 TST--------SGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYEC---------------- 192

Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
            +  +   P   H     D+   K      L     +T                      
Sbjct: 193 -LRGKR--PYRGHSRTIRDQIRAKQETADVLYPATWSTE--------------------- 228

Query: 391 DHSAGYLIDLLQGLLRYDPSSRL--TAHDALKHPFF 424
                  ID +  LL  DP  RL     D   HP+F
Sbjct: 229 ------AIDAINKLLERDPQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 64.8 bits (158), Expect = 1e-11
 Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 45/228 (19%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV-----RSIKKYREAAMTEIDVLELLKR 150
            +  LR+IG G+FG V    D  T E VAIK +     +S +K+++  + E+  L+ L+ 
Sbjct: 16  LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQD-IIKEVRFLQQLRH 74

Query: 151 YDRSGSRCVQIRNWFDYRNHIC-IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +  +  R H   +V E    S  D L  +  +P     +  I    L+ 
Sbjct: 75  -----PNTIEYKGCY-LREHTAWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQG 127

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +A++H    IH D+K  NIL   P                             +K+ DFG
Sbjct: 128 LAYLHSHERIHRDIKAGNILLTEP---------------------------GTVKLADFG 160

Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIEL 314
           S +      N  V T ++ APEVIL +    +    D+WS+G   IEL
Sbjct: 161 SASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 64.7 bits (157), Expect = 1e-11
 Identities = 62/228 (27%), Positives = 94/228 (41%), Gaps = 47/228 (20%)

Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLE------LLKRY 151
           L +IG+G+FG+V   +D  T + VAIK++     +   E    EI VL       + K Y
Sbjct: 9   LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 68

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
              GS     + W        I+ E LG  S  D LR     PF    +  + +++L+ +
Sbjct: 69  ---GSYLKGTKLW--------IIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGL 114

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H  + IH D+K  N+L      +K+ D+ V                         G 
Sbjct: 115 DYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQ 150

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
                 + N  V T  + APEVI    +    D+WS+G   IEL  GE
Sbjct: 151 LTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 70/264 (26%), Positives = 116/264 (43%), Gaps = 39/264 (14%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDR--ETGETVAIKVVRS----IKKYREAAMTEIDVLELL 148
           S +  ++ +G G FG+V  CL R  +T    A+K +R     ++        E D+L   
Sbjct: 1   SMFVKIKTLGIGAFGEV--CLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILA-- 56

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
              +      V++   F  ++++  V + + G  +   L +     FP DL R    +L 
Sbjct: 57  ---EADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI--FPEDLARFYIAELT 111

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA--RSPTDVNYYK---RLPKSSA 262
             V  +H +  IH D+KP+NIL     ++K+ D+ +    R   D  YY+    + + S 
Sbjct: 112 CAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSM 171

Query: 263 IKVIDFGST----------------AYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDM 304
               ++G                  A +HQ    + +V T +Y APEV+L  G++  CD 
Sbjct: 172 DFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW 231

Query: 305 WSVGCILIELCSGEALFQTHENLE 328
           WSVG IL E+  G+  F     LE
Sbjct: 232 WSVGVILYEMLVGQPPFLAQTPLE 255

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 67/340 (19%), Positives = 117/340 (34%), Gaps = 101/340 (29%)

Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGS 156
           + +G+G+FG+VL    + T E  A+KV++          E  MTE  VL L  ++     
Sbjct: 1   KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKH----P 56

Query: 157 RCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              Q+ + F  ++ +  V E +  G  ++   R      F     R    +++  + F+H
Sbjct: 57  FLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLH 113

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG---ST 271
           +  +I+ DLK +N+L                           L     IK+ DFG     
Sbjct: 114 ERGIIYRDLKLDNVL---------------------------LDSEGHIKIADFGMCKEG 146

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
                  +    T  Y APE++    +    D W++G +L E+ +G++ F     + L  
Sbjct: 147 ILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQ 206

Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
             + + V    P+ +                           S +A              
Sbjct: 207 SILEDEVR--YPRWL---------------------------SKEAK------------- 224

Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAH-----DALKHPFF 424
                     +L+  L  +P  RL        D   HPFF
Sbjct: 225 ---------SILKSFLTKNPEKRLGCLPTGEQDIKGHPFF 255

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 63.9 bits (155), Expect = 2e-11
 Identities = 77/327 (23%), Positives = 129/327 (39%), Gaps = 84/327 (25%)

Query: 102 KIGEGTFGQVLDCLDRE--TGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           KIGEG+ G V  C+ RE  +G  VA+K++   K+ R     E+   E++   D      V
Sbjct: 28  KIGEGSTGIV--CIAREKHSGRQVAVKMMDLRKQQRR----ELLFNEVVIMRDYQHQNVV 81

Query: 160 QIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
           ++   +     + ++ E L G +L D + +       +  V E    +L+ + ++H   +
Sbjct: 82  EMYKSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCE---SVLQALCYLHSQGV 138

Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH D+K ++IL      +K+ D+   A+   DV      PK  ++               
Sbjct: 139 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV------PKRKSL--------------- 177

Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
              V T ++ APEVI    +    D+WS+G ++IE+  GE  +                 
Sbjct: 178 ---VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPY---------------FS 219

Query: 339 PIPQHMLKRV-DKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL 397
             P   +KR+ D P            P    +   I  VL+                   
Sbjct: 220 DSPVQAMKRLRDSP------------PPKLKNAHKISPVLR------------------- 248

Query: 398 IDLLQGLLRYDPSSRLTAHDALKHPFF 424
            D L+ +L  +P  R TA + L HPF 
Sbjct: 249 -DFLERMLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 29/244 (11%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSI---KKYREAAMTEIDVLELLK 149
             +K ++ +G+G  G+V     + TG+  A+KV+  + +    K +    TE ++L  L 
Sbjct: 1   KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVL-TEQEILATLD 59

Query: 150 R------YDRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREI 202
                  Y             F    ++C+V +   G  L+  L++   +    ++ R  
Sbjct: 60  HPFLPTLYAS-----------FQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFY 108

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY---KVTARSPTDVNY-YKRLP 258
             ++L  + ++H L +++ DLKPENIL     ++ + D+   K +   P  V+   ++  
Sbjct: 109 AAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGS 168

Query: 259 KSSAIKVIDFGSTAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           + S++  I   + + E     N  V T  Y APEVI G G     D W++G +L E+  G
Sbjct: 169 RRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228

Query: 318 EALF 321
              F
Sbjct: 229 TTPF 232

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 63.8 bits (155), Expect = 4e-11
 Identities = 81/331 (24%), Positives = 132/331 (39%), Gaps = 84/331 (25%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRSGSR-CV 159
           IG+GTFGQV     ++T    A+KV+  + I   +E A T I    +L R     S   V
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHT-IGERNILVRTLLDESPFIV 59

Query: 160 QIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
            ++  F   + + +V + M G  L+  L+K     F  D  +    +L+  +  +H   +
Sbjct: 60  GLKFSFQTDSDLYLVTDYMSGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYDI 117

Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           ++ DLKPENIL  +  ++ + D+ ++  + TD                        ++  
Sbjct: 118 VYRDLKPENILLDATGHIALCDFGLSKANLTD------------------------NKTT 153

Query: 279 NYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVL 337
           N    T  Y APEV+L   G++   D WS+G ++ E+C G + F                
Sbjct: 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPF---------------Y 198

Query: 338 GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL 397
               Q M +         +  G++ +P+   S E  + V                     
Sbjct: 199 AEDTQQMYRN--------IAFGKVRFPKNVLSDEGRQFV--------------------- 229

Query: 398 IDLLQGLLRYDPSSRLTAHD---ALK-HPFF 424
               +GLL  +P  RL AH     LK HPFF
Sbjct: 230 ----KGLLNRNPQHRLGAHRDAVELKEHPFF 256

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 63.1 bits (153), Expect = 4e-11
 Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 40/236 (16%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKR 150
           + ++I +KIG G F +V         + VA+K V+  +    K R+  + EID+L+ L  
Sbjct: 2   ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH 61

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEM-----LGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                   ++  + F   N + IV E+     L   +  F  K   R  P   V +   Q
Sbjct: 62  -----PNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYF--KKQKRLIPERTVWKYFVQ 114

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           L   V  MH  R++H D+KP N+   +   +K+ D  +            R   S     
Sbjct: 115 LCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-----------GRFFSS----- 158

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
                T   H     +V T +Y +PE I   G+++  D+WS+GC+L E+ + ++ F
Sbjct: 159 ----KTTAAHS----LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 63.5 bits (154), Expect = 4e-11
 Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 38/244 (15%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYDRSGSRC 158
           +G+GTFG+V+   ++ TG   A+K++R    I K   A  +TE  VL+  +         
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-----PFL 57

Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
             ++  F   + +C V E   G  L+  L +   R F  +  R  G +++  + ++H   
Sbjct: 58  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 115

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +++ D+K EN++     ++KI D+ +     +D                  G+T      
Sbjct: 116 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GATM----- 152

Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEHLAMMER 335
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 153 -KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 211

Query: 336 VLGP 339
           +  P
Sbjct: 212 IRFP 215

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 63.7 bits (155), Expect = 4e-11
 Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 42/231 (18%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT----EIDVLELLKRYDRSGSRC 158
           +G G FG+V    ++ TG+  A+KV++      +  ++    E D+L +      +    
Sbjct: 9   VGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSI-----SNSPWI 63

Query: 159 VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYR-PFPVDLVREIGRQLLECVAFMHDL 216
            Q++  F  ++++ +V E   G  L   L  N Y   F  D+ +    +L+  +  +H +
Sbjct: 64  PQLQYAFQDKDNLYLVMEYQPGGDLLSLL--NRYEDQFDEDMAQFYLAELVLAIHSVHQM 121

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             +H D+KPEN+L     ++K+ D+   AR   +     +LP                  
Sbjct: 122 GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLP------------------ 163

Query: 277 EHNYIVSTRHYRAPEVILGL----GWSY--PCDMWSVGCILIELCSGEALF 321
                V T  Y APEV+  +      +Y   CD WS+G I  E+  G + F
Sbjct: 164 -----VGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF 209

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 63.3 bits (154), Expect = 6e-11
 Identities = 76/339 (22%), Positives = 124/339 (36%), Gaps = 107/339 (31%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRC 158
           +G G+FG+V     + TGE  AIK ++  +    K  +    E  +L  L     S    
Sbjct: 26  LGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-----SHPFI 80

Query: 159 VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           V +   F   N +  + E ++G  L+  LRK     FP D+ +    +L+    ++H   
Sbjct: 81  VNMMCSFQDENRVYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKD 138

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +I+ DLKPEN+L  +  ++K+          TD  + K++P                  +
Sbjct: 139 IIYRDLKPENLLLDNKGHVKV----------TDFGFAKKVP------------------D 170

Query: 278 HNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG------EALFQTHENLEHL 330
             + +  T  Y APEVI   G     D W++G +L E  +G      +  F+ +E     
Sbjct: 171 RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEK---- 226

Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
                                    +  GRL +P     R                    
Sbjct: 227 -------------------------ILAGRLKFPNWFDGRAR------------------ 243

Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTA-----HDALKHPFF 424
                   DL++GLL+ D + RL        D   HP+F
Sbjct: 244 --------DLVKGLLQTDHTKRLGTLKGGVADVKNHPYF 274

Length = 329

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 62.1 bits (151), Expect = 8e-11
 Identities = 81/294 (27%), Positives = 120/294 (40%), Gaps = 75/294 (25%)

Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K ++++G+G FG V  C    L   TGE VA+K ++ S  ++      EI++L+ L    
Sbjct: 7   KFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL---- 62

Query: 153 RSGSRCVQIRNWFDY--------RNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREI 202
                  Q  N   Y        R ++ +V E L P  SL D+L+K+  R     L+   
Sbjct: 63  -------QHDNIVKYKGVCYSAGRRNLRLVMEYL-PYGSLRDYLQKHRERLDHRKLL-LY 113

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSS 261
             Q+ + + ++   R +H DL   NIL  S   +KI D+ +T   P D  YYK R P  S
Sbjct: 114 ASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGES 173

Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL------- 314
            I                       + APE +    +S   D+WS G +L EL       
Sbjct: 174 PI----------------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKS 211

Query: 315 CSGEALFQTHENLEHLAMM--ERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEG 366
           CS  A F        + MM  ++    I  H++       E     GRL  P G
Sbjct: 212 CSPPAEF--------MRMMGNDKQGQMIVYHLI-------ELLKNNGRLPAPPG 250

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 62.3 bits (151), Expect = 8e-11
 Identities = 82/340 (24%), Positives = 134/340 (39%), Gaps = 92/340 (27%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRC---V 159
           IG+G+FG+V+    R+T    A+K   +I+K    + +E+    L +R   +   C   V
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALK---TIRKAHIVSRSEVT-HTLAERTVLAQVNCPFIV 56

Query: 160 QIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
            ++  F     + +V   + G  L+  L++     F +   R    +LL  +  +H   +
Sbjct: 57  PLKFSFQSPEKLYLVLAFINGGELFHHLQREG--RFDLSRARFYTAELLCALENLHKFNV 114

Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           I+ DLKPENIL          DY                     I + DFG      ++ 
Sbjct: 115 IYRDLKPENILL---------DY------------------QGHIALCDFGLCKLNMKDD 147

Query: 279 ---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
              N    T  Y APE++LG G++   D W++G +L E+ +G   F   EN         
Sbjct: 148 DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD-EN--------- 197

Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG 395
               + +   K + +P         L +P+G                        D  A 
Sbjct: 198 ----VNEMYRKILQEP---------LRFPDG-----------------------FDRDAK 221

Query: 396 YLIDLLQGLLRYDPSSRL---TAHDALKHPFFTRDYYRRF 432
              DLL GLL  DP+ RL    A +   HPFF++  +++ 
Sbjct: 222 ---DLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWKKL 258

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 62.4 bits (151), Expect = 9e-11
 Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 35/219 (15%)

Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYDRSGSRC 158
           LR+IG G+FG V    D  T E VAIK +  S K+  E     I  ++ L+R     S  
Sbjct: 30  LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNS-- 87

Query: 159 VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
           ++ +  +   +   +V E    S  D L  +  +P     +  I    L+ +A++H   +
Sbjct: 88  IEYKGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNM 146

Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH D+K  NIL   P                             +K+ DFGS +      
Sbjct: 147 IHRDIKAGNILLTEP---------------------------GQVKLADFGSASIA-SPA 178

Query: 279 NYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIEL 314
           N  V T ++ APEVIL +    +    D+WS+G   IEL
Sbjct: 179 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 61.9 bits (150), Expect = 1e-10
 Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 39/236 (16%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMT--EIDVLELLKRYD 152
           ++  R +G+G FG+V  C  R TG+  A K +  + IKK +  AM   E  +LE      
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILE------ 55

Query: 153 RSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
           +  SR  V +   ++ ++ +C+V  ++      F   N   P   D  R I      C  
Sbjct: 56  KVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNP-GFDEQRAIFYAAELCCG 114

Query: 212 F--MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
              +   R+++ DLKPENIL     +++I D  +  + P       R             
Sbjct: 115 LEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR------------- 161

Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
                       V T  Y APEVI    +++  D W +GC++ E+  G++ F+  +
Sbjct: 162 ------------VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 60.8 bits (147), Expect = 2e-10
 Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 35/238 (14%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
           N    ++++++IG GT+G V    +  TGE  AIKV+    K        +   E++   
Sbjct: 6   NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVI----KLEPGEDFAVVQQEIIMMK 61

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           D   S  V     +  R+ + I  E  G  SL D        P     +  + R+ L+ +
Sbjct: 62  DCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGL 119

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H    +H D+K  NIL     ++K+ D+ V+A+    +   K               
Sbjct: 120 YYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF------------- 166

Query: 271 TAYEHQEHNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGE-ALFQTH 324
                      + T ++ APEV       G++  CD+W+VG   IEL   +  +F  H
Sbjct: 167 -----------IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH 213

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 61.1 bits (148), Expect = 2e-10
 Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 55/237 (23%)

Query: 96  RY-KILRKIGEGTFGQV-LDCLD---RETGETVAIKVVRS--IKKYREAAMTEIDVLELL 148
           RY K +R +GEG FG+V L C D     TGE VA+K ++    ++       EI++L+ L
Sbjct: 4   RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL 63

Query: 149 K-----RY----DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
                 +Y       G + +Q+           + +  LG SL D+L K+      ++L 
Sbjct: 64  YHENIVKYKGCCSEQGGKGLQL----------IMEYVPLG-SLRDYLPKHK-----LNLA 107

Query: 200 REI--GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
           + +   +Q+ E +A++H    IH DL   N+L  +   +KI D+ +    P    YY   
Sbjct: 108 QLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY--- 164

Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                 +V + G             S   + A E +    +SY  D+WS G  L EL
Sbjct: 165 ------RVREDGD------------SPVFWYAVECLKENKFSYASDVWSFGVTLYEL 203

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 61.9 bits (150), Expect = 2e-10
 Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 36/227 (15%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           + IL     G  G    C+D +T E V IK  +     R    TE  +L  +        
Sbjct: 94  FSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINH-----P 143

Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             +Q++  F Y    C++       LY +L     R   +  +  I R +L  + ++H+ 
Sbjct: 144 SIIQLKGTFTYNKFTCLILPRYKTDLYCYL--AAKRNIAICDILAIERSVLRAIQYLHEN 201

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R+IH D+K ENI    P  + + D+   A  P D+N  K    +  I             
Sbjct: 202 RIIHRDIKAENIFINHPGDVCLGDFG-AACFPVDINANKYYGWAGTIAT----------- 249

Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE-ALFQ 322
                       APE++    +    D+WS G +L E+ +   +LF+
Sbjct: 250 -----------NAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285

Length = 391

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 61.6 bits (149), Expect = 2e-10
 Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 44/256 (17%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAA--MTEIDVLELLKRYDRSGSRC 158
           +G+GTFG+V+   ++ TG   A+K+++   I    E A  +TE  VL+  +    +    
Sbjct: 3   LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA--- 59

Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
             ++  F   + +C V E   G  L+  L +   R F  D  R  G +++  + ++H  +
Sbjct: 60  --LKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK 115

Query: 218 -LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
            +++ DLK EN++     ++KI D+ +      D                  G+T     
Sbjct: 116 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD------------------GATM---- 153

Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEHLAMME 334
                  T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME
Sbjct: 154 --KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 211

Query: 335 -----RVLGPIPQHML 345
                R L P  + +L
Sbjct: 212 EIRFPRTLSPEAKSLL 227

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 61.7 bits (150), Expect = 2e-10
 Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 41/256 (16%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDR--ETGETVAIKVVRS---IKKYREAAM-TEIDVLELL 148
           S +  ++ IG G FG+V  CL R  +T    A+K +R    + + + A +  E D+L   
Sbjct: 1   SMFVKIKTIGIGAFGEV--CLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILA-- 56

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEM---LGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                + +  V ++ ++ +++   + F M    G  +   L +     F  DL R    +
Sbjct: 57  ----EADNEWV-VKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGI--FEEDLARFYIAE 109

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA--RSPTDVNYYKR------- 256
           L   +  +H +  IH D+KP+NIL     ++K+ D+ +    R   D  YY++       
Sbjct: 110 LTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQD 169

Query: 257 ----LPKSSAIKVIDFGS----TAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMW 305
                 + S I              +HQ    H+ +V T +Y APEV+L  G++  CD W
Sbjct: 170 SMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHS-LVGTPNYIAPEVLLRTGYTQLCDWW 228

Query: 306 SVGCILIELCSGEALF 321
           SVG IL E+  G+  F
Sbjct: 229 SVGVILYEMLVGQPPF 244

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 60.6 bits (147), Expect = 3e-10
 Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 37/232 (15%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMT--EIDVLELLKRYD 152
           ++  R +G+G FG+V  C  R TG+  A K +  + IKK +  AM   E  +LE      
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE------ 55

Query: 153 RSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRP-FPVDLVREIGRQLLECV 210
           +  SR  V +   ++ ++ +C+V  ++      F   N   P F  +       ++   +
Sbjct: 56  KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGL 115

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
             +H  R+++ DLKPENIL     +++I D  +    P                      
Sbjct: 116 EDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIP---------------------- 153

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
              E +     V T  Y APEV+    +++  D W +GC++ E+  G++ F+
Sbjct: 154 ---EGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFR 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 60.0 bits (145), Expect = 4e-10
 Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 36/234 (15%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKR 150
           + ++I +KIG G F +V        G  VA+K V+       K R   + EID+L+ L  
Sbjct: 2   ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 61

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLR--KNNYRPFPVDLVREIGRQLL 207
                   ++    F   N + IV E+     L   ++  K   R  P   V +   QL 
Sbjct: 62  -----PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLC 116

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             +  MH  R++H D+KP N+   +   +K+ D  +            R   S       
Sbjct: 117 SALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-----------GRFFSS------- 158

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
              T   H     +V T +Y +PE I   G+++  D+WS+GC+L E+ + ++ F
Sbjct: 159 --KTTAAHS----LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 60.1 bits (146), Expect = 4e-10
 Identities = 55/230 (23%), Positives = 88/230 (38%), Gaps = 48/230 (20%)

Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRC- 158
           L ++GEG  G V  C  + TG   A+K +              D+ + + R       C 
Sbjct: 6   LSRLGEGAGGSVTKCRLKNTGMIFALKTI--------TTDPNPDLQKQILRELEINKSCK 57

Query: 159 ----VQIRNWF--DYRNHICIVFEMLG----PSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
               V+    F  +  + I I  E        S+Y  ++K   R     L + I   +L+
Sbjct: 58  SPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGK-IAESVLK 116

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            ++++H  ++IH D+KP NIL                           L +   +K+ DF
Sbjct: 117 GLSYLHSRKIIHRDIKPSNIL---------------------------LTRKGQVKLCDF 149

Query: 269 G-STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           G S    +        T  Y APE I G  +S   D+WS+G  L+E+   
Sbjct: 150 GVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQN 199

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 59.9 bits (146), Expect = 4e-10
 Identities = 57/249 (22%), Positives = 92/249 (36%), Gaps = 79/249 (31%)

Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
              L+D L+K          V++I RQL+E +  +H   +IH D+K EN+L+        
Sbjct: 93  DGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY-------- 142

Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                        +  K       I + D+G          Y   T  Y +PE I G  +
Sbjct: 143 -------------DRAKD-----RIYLCDYGLCKIIGTPSCY-DGTLDYFSPEKIKGHNY 183

Query: 299 SYPCDMWSVGCILIELCSGEALFQTH--ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFV 356
               D W+VG +  EL +G+  F+    E L+  ++++R    +P   +K V K A  FV
Sbjct: 184 DVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLP--FIKNVSKNANDFV 241

Query: 357 RRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAH 416
                                                        Q +L+Y+ + RLT +
Sbjct: 242 ---------------------------------------------QSMLKYNINYRLTNY 256

Query: 417 DA-LKHPFF 424
           +  +KHPF 
Sbjct: 257 NEIIKHPFL 265

Length = 267

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 60.0 bits (145), Expect = 4e-10
 Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYR--EAAMTEIDVLELLKRYD 152
           ++  R +G+G FG+V  C  R TG+  A K +  + IKK +    A+ E  +LE      
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILE------ 55

Query: 153 RSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRP-FPVDLVREIGRQLLECV 210
           +  S+  V +   ++ ++ +C+V  ++      F   N   P F  +       ++L  +
Sbjct: 56  KVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGL 115

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
             +H    ++ DLKPENIL     +++I D  +  + P   +   R              
Sbjct: 116 EDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR-------------- 161

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
                      V T  Y APEV+    ++   D W +GC++ E+  G++ F+
Sbjct: 162 -----------VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFR 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 60.4 bits (146), Expect = 6e-10
 Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 33/246 (13%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI----DVLELLKRYD 152
           ++ L+ IG G FG+V     ++TG   A+K++R      +  +  I    D+L      +
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDIL-----VE 57

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL----- 206
             G+  V++   F  + ++ ++ E L G  +   L K        D + E   Q      
Sbjct: 58  ADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKK-------DTLSEEATQFYIAET 110

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA--RSPTDVNYYKRL----PKS 260
           +  +  +H L  IH D+KP+N+L  +  ++K+ D+ +    +      +Y+ L    P  
Sbjct: 111 VLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSD 170

Query: 261 SAIKVIDFGSTAYEHQEHN-----YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
            + + ++    A   +++        V T  Y APEV +  G++  CD WS+G I+ E+ 
Sbjct: 171 FSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230

Query: 316 SGEALF 321
            G   F
Sbjct: 231 IGYPPF 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 59.4 bits (144), Expect = 8e-10
 Identities = 52/232 (22%), Positives = 90/232 (38%), Gaps = 47/232 (20%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
              + ++ +G GTFG+V    DR +    A+KV+         A+ E+  L+  +     
Sbjct: 1   DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVM---------AIPEVIRLKQEQHVHNE 51

Query: 155 GSRCVQIRNWFDYR--------NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                ++ + F  R          + ++ E + G  L+ +LR  N   F          +
Sbjct: 52  KRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLR--NSGRFSNSTGLFYASE 109

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           ++  + ++H   +++ DLKPENIL                           L K   IK+
Sbjct: 110 IVCALEYLHSKEIVYRDLKPENIL---------------------------LDKEGHIKL 142

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
            DFG           +  T  Y APEVI   G +   D W++G ++ E+  G
Sbjct: 143 TDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 59.3 bits (143), Expect = 8e-10
 Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 51/240 (21%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++I+  IG+GT+G+V   L+++ G   A+K++  I    E    E ++L+ L  +     
Sbjct: 20  WEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDH----P 75

Query: 157 RCVQIRNWF---DYRN--HICIVFEML-GPSLYD----FLRKNNYRPFPVDLVREIGRQL 206
             V+    +   D +N   + +V E+  G S+ D    FL++      P  ++  I  + 
Sbjct: 76  NVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEP--IIAYILHEA 133

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L  +  +H  + IH D+K  NIL                           L     +K++
Sbjct: 134 LMGLQHLHVNKTIHRDVKGNNIL---------------------------LTTEGGVKLV 166

Query: 267 DFGSTAY---EHQEHNYIVSTRHYRAPEVI-----LGLGWSYPCDMWSVGCILIELCSGE 318
           DFG +A         N  V T  + APEVI     L   +   CD+WS+G   IEL  G+
Sbjct: 167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGD 226

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 60.2 bits (146), Expect = 8e-10
 Identities = 93/402 (23%), Positives = 155/402 (38%), Gaps = 105/402 (26%)

Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDC-LDRETGET 122
            ++GL +   P ++ DD      F LG          +K+GEG FG V    L  +  + 
Sbjct: 120 PLEGLFR---PSFKKDD------FVLG----------KKLGEGAFGVVYKASLVNKQSKK 160

Query: 123 VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF------DYRNHICIVFE 176
               V++   +Y      EI + E ++R     + C      F         +   +V+ 
Sbjct: 161 EGKYVLKKATEYGAV---EIWMNERVRR--ACPNSCADFVYGFLEPVSSKKEDEYWLVWR 215

Query: 177 MLGPS-LYDFLRKNNYRPFPVD-------------------LVREIGRQLLECVAFMHDL 216
             G S L D ++   + P+ V+                   +++ I RQ+L  +  +H  
Sbjct: 216 YEGESTLADLMQSKEF-PYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST 274

Query: 217 RLIHTDLKPENILFVSPE--YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            ++H D+KP+NI+F S      KI D    A     +NY   +PK     ++D    A E
Sbjct: 275 GIVHRDVKPQNIIF-SEGSGSFKIIDLGAAADLRVGINY---IPKEF---LLDPRYAAPE 327

Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPC----------DMWSVGCILIELCSGEALFQTH 324
                YI+ST+   AP   +    S P           D++S G I +++      F   
Sbjct: 328 Q----YIMSTQTPSAPSAPVATALS-PVLWQLNLPDRFDIYSAGLIFLQMA-----FPNL 377

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
            +  +L    R         LKR D     +  R  ++       R   + VL L     
Sbjct: 378 RSDSNLIQFNR--------QLKRNDYDLVAW--RKLVEPRASPDLRRGFE-VLDL----- 421

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 D  AG+  +LL+ ++R+    R++A  AL HP+F R
Sbjct: 422 ------DGGAGW--ELLKSMMRFKGRQRISAKAALAHPYFDR 455

Length = 566

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 58.4 bits (141), Expect = 1e-09
 Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 40/289 (13%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYDR 153
           Y  +R +G+G++G+V     R  G+   IK +    + ++ R+AA  E  +L  LK  + 
Sbjct: 2   YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNI 61

Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
              R     +W      + IV     G  LY  L++   +  P + V E   Q+   + +
Sbjct: 62  VAYR----ESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQY 117

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H+  ++H DLK +N+       +K+ D  + AR   +                D  ST 
Sbjct: 118 LHEKHILHRDLKTQNVFLTRTNIIKVGDLGI-ARVLENQC--------------DMAST- 161

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                   ++ T +Y +PE+     ++Y  D+W++GC + E+ + +  F      +  ++
Sbjct: 162 --------LIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK---DMNSL 210

Query: 333 MERVL-GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
           + R++ G +P  M K       + +       PE    R S+K++L+ P
Sbjct: 211 VYRIIEGKLPP-MPKDYSPELGELIATMLSKRPE---KRPSVKSILRQP 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 58.8 bits (142), Expect = 2e-09
 Identities = 61/267 (22%), Positives = 102/267 (38%), Gaps = 47/267 (17%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGSRC 158
           +G+G+FG+VL    +  GE  A+K ++     I    E  M E  VL L           
Sbjct: 3   LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAW----ENPFL 58

Query: 159 VQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVAFMH 214
             +   F  + H+  V E L  G  ++    K  +     DL R      +++  + F+H
Sbjct: 59  THLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRF-----DLYRATFYAAEIVCGLQFLH 113

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG---ST 271
              +I+ DLK +N++                           L +   IK+ DFG     
Sbjct: 114 SKGIIYRDLKLDNVM---------------------------LDRDGHIKIADFGMCKEN 146

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
            +     +    T  Y APE++ GL +++  D WS G +L E+  G++ F   +  E   
Sbjct: 147 VFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFE 206

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRR 358
            +       P+ + K      EK   R
Sbjct: 207 SIRVDTPHYPRWITKESKDILEKLFER 233

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 75/286 (26%), Positives = 113/286 (39%), Gaps = 87/286 (30%)

Query: 100 LRKIGEGTFGQVL---DCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           L+ +G+G+FG+V         + G+  A+KV++                  LK  DR   
Sbjct: 1   LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKAT---------------LKVRDRV-- 43

Query: 157 RCVQIRNWFDYRNHICIV-----FEMLGPSLY---DFLRKNNYRPFPVDLVREIGRQLL- 207
           R    R+     NH  IV     F+  G  LY   DFLR         DL   + ++++ 
Sbjct: 44  RTKMERDILAEVNHPFIVKLHYAFQTEG-KLYLILDFLRGG-------DLFTRLSKEVMF 95

Query: 208 --ECVAF-----------MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 254
             E V F           +H L +I+ DLKPENIL                         
Sbjct: 96  TEEDVKFYLAELALALDHLHSLGIIYRDLKPENIL------------------------- 130

Query: 255 KRLPKSSAIKVIDFG--STAYEHQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 311
             L +   IK+ DFG    + +H++  Y    T  Y APEV+   G +   D WS G ++
Sbjct: 131 --LDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 188

Query: 312 IELCSGEALFQTHENLEHLAM-------MERVLGPIPQHMLKRVDK 350
            E+ +G   FQ  +  E + M       M + L P  Q +L+ + K
Sbjct: 189 FEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFK 234

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 58.0 bits (140), Expect = 2e-09
 Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 35/228 (15%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREA-AMTEIDVLELLKRYDRSGSRC 158
           +G+G FG+V     + TG+  A K +   R  KK  E  A+ E ++LE +     +    
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-----NSPFI 55

Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           V +   F+ + H+C+V  ++ G  L   +     R   ++ V     Q+   +  +H + 
Sbjct: 56  VNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD 115

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +++ D+KPEN+L       ++ D  +           +R                     
Sbjct: 116 IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQR--------------------- 154

Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
                 T  Y APE++    +SYP D +++GC + E+ +G   F+ H+
Sbjct: 155 ----AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 36/229 (15%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGSRC 158
           IG G FG+V  C   +TG+  A+K +      +K+    A+ E  +L L+   D     C
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           +     F   + +C + +++ G  L+  L ++    F    +R    +++  +  MH+  
Sbjct: 62  MTYA--FHTPDKLCFILDLMNGGDLHYHLSQHGV--FSEKEMRFYATEIILGLEHMHNRF 117

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +++ DLKP NIL     +++I D  +        ++ K+ P +S                
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHAS---------------- 155

Query: 278 HNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
               V T  Y APEV+  G  +    D +S+GC+L +L  G + F+ H+
Sbjct: 156 ----VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 57.7 bits (139), Expect = 3e-09
 Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 42/245 (17%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           T  ++I+  IG+GT+G+V    +++ G   A+K++  I    E    E ++L+ L  +  
Sbjct: 21  TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNH-- 78

Query: 154 SGSRCVQIRNWFDYRNH-----ICIVFEML-GPSLYDFLRKNNYRPFPVD--LVREIGRQ 205
                V+    F   +      + +V E+  G S+ + ++        +D  ++  I   
Sbjct: 79  --PNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYG 136

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
            L  +  +H+ R+IH D+K  NIL  +   +K+ D+ V+A+  +      RL ++++   
Sbjct: 137 ALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTS-----TRLRRNTS--- 188

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVIL---GLGWSYP--CDMWSVGCILIELCSGE-A 319
                           V T  + APEVI       +SY   CD+WS+G   IEL  G+  
Sbjct: 189 ----------------VGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPP 232

Query: 320 LFQTH 324
           LF  H
Sbjct: 233 LFDMH 237

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 57.5 bits (139), Expect = 3e-09
 Identities = 68/283 (24%), Positives = 110/283 (38%), Gaps = 60/283 (21%)

Query: 97  YKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI-----KKYREAAMTEIDVLE 146
           +++LR +G G +G+V   L R     + G+  A+KV++        K  E   TE  VLE
Sbjct: 2   FELLRVLGTGAYGKVF--LVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLE 59

Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQ 205
            +    R     V +   F     + ++ + + G  L+  L +  +  F    VR    +
Sbjct: 60  AV----RRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREH--FTESEVRVYIAE 113

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           ++  +  +H L +I+ D+K ENIL                           L     + +
Sbjct: 114 IVLALDHLHQLGIIYRDIKLENIL---------------------------LDSEGHVVL 146

Query: 266 IDFG----STAYEHQEHNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEA 319
            DFG      A E +       T  Y APEVI G   G     D WS+G +  EL +G +
Sbjct: 147 TDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGAS 206

Query: 320 LFQTH-ENLEHLAMMERVLG---PIPQHMLKRVDKPAEKFVRR 358
            F    E      +  R+L    P P+ M       A  F+++
Sbjct: 207 PFTVDGEQNSQSEISRRILKSKPPFPKTM----SAEARDFIQK 245

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 57.7 bits (139), Expect = 3e-09
 Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 63/254 (24%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++I++ IG G FG+V               VV+     R  AM  ++  E+LKR + +  
Sbjct: 3   FEIIKVIGRGAFGEV--------------AVVKMKHTERIYAMKILNKWEMLKRAETACF 48

Query: 157 RCVQIRN--------W-------FDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVR 200
           R  + RN        W       F   N++ +V +  +G  L   L K   R  P D+ R
Sbjct: 49  R--EERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDR-LPEDMAR 105

Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK- 259
               +++  +  +H L  +H D+KP+N+L                    D+N + RL   
Sbjct: 106 FYIAEMVLAIHSIHQLHYVHRDIKPDNVLL-------------------DMNGHIRLADF 146

Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILIEL 314
            S +K+   G+      + +  V T  Y +PE++     G+G   P CD WS+G  + E+
Sbjct: 147 GSCLKMNQDGTV-----QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 201

Query: 315 CSGEALFQTHENLE 328
             GE  F     +E
Sbjct: 202 LYGETPFYAESLVE 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 56.4 bits (137), Expect = 5e-09
 Identities = 54/245 (22%), Positives = 93/245 (37%), Gaps = 72/245 (29%)

Query: 101 RKIGEGTFGQVLDC-LDRETGET--VAIKVVRSIKK-------YREAA-MTEID---VLE 146
           +K+GEG FG+V    L  + G+T  VA+K ++            +EA  M ++    V+ 
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIG-R 204
           LL      G  C +          + +V E M G  L D+LRK+    FP      +  +
Sbjct: 61  LL------GV-CTE-------EEPLYLVLEYMEGGDLLDYLRKSR-PVFPSPEKSTLSLK 105

Query: 205 QLLECV-------AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
            LL           ++   + +H DL   N L V  + +                     
Sbjct: 106 DLLSFAIQIAKGMEYLASKKFVHRDLAARNCL-VGEDLV--------------------- 143

Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCIL 311
                +K+ DFG  + +  + +Y       +      APE +    ++   D+WS G +L
Sbjct: 144 -----VKISDFG-LSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLL 197

Query: 312 IELCS 316
            E+ +
Sbjct: 198 WEIFT 202

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 57.0 bits (137), Expect = 5e-09
 Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 35/219 (15%)

Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYDRSGSRC 158
           LR+IG G+FG V    D    E VAIK +  S K+  E     I  +  L++     +  
Sbjct: 20  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT-- 77

Query: 159 VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
           +Q R  +   +   +V E    S  D L  +  +P     +  +    L+ +A++H   +
Sbjct: 78  IQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNM 136

Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH D+K  NIL   P                             +K+ DFGS +      
Sbjct: 137 IHRDVKAGNILLSEP---------------------------GLVKLGDFGSASIM-APA 168

Query: 279 NYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIEL 314
           N  V T ++ APEVIL +    +    D+WS+G   IEL
Sbjct: 169 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 56.7 bits (137), Expect = 5e-09
 Identities = 63/266 (23%), Positives = 115/266 (43%), Gaps = 48/266 (18%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGET-VAIKVV-------RSIKKYREAAMTEIDVLEL- 147
           Y +L  +G G FG V     +  G+  +A+K +          K+ R+ ++ +I V E+ 
Sbjct: 2   YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDI-VSEVT 60

Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLR--KNNYRPFPVDLVREIGR 204
           + +        V+    F   + + IV +++ G  L +     K   + F  + +  I  
Sbjct: 61  IIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFV 120

Query: 205 QLLECVAFMH-DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
           Q++  + ++H + R++H DL P NI+          D KVT                   
Sbjct: 121 QMVLALRYLHKEKRIVHRDLTPNNIMLGE-------DDKVT------------------- 154

Query: 264 KVIDFGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
            + DFG  A + Q  + + S   T  Y  PE++    +    D+W+ GCIL ++C+ +  
Sbjct: 155 -ITDFG-LAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP 212

Query: 321 FQTHENLEHLAM--MERVLGPIPQHM 344
           F +  N+  LA   +E V  P+P+ M
Sbjct: 213 FYS-TNMLSLATKIVEAVYEPLPEGM 237

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 56.9 bits (137), Expect = 6e-09
 Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 38/245 (15%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRC 158
           IG+G+FG+VL    +  G+  A+KV++      +K ++  M E +VL  LK         
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVL--LKNVKHP--FL 58

Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           V +   F     +  V + + G  L+  L++   R FP    R    ++   + ++H + 
Sbjct: 59  VGLHYSFQTTEKLYFVLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSIN 116

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +++ DLKPENIL  S  ++ + D+ +                   I   D  +T      
Sbjct: 117 IVYRDLKPENILLDSQGHVVLTDFGLC---------------KEGIAQSDTTTT------ 155

Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF---QTHENLEHLAMME 334
                 T  Y APEVI    +    D W +G +L E+  G   F      E  +++    
Sbjct: 156 ---FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP 212

Query: 335 RVLGP 339
            VL P
Sbjct: 213 LVLRP 217

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 57.0 bits (137), Expect = 6e-09
 Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 33/246 (13%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI----DVLELLKRYD 152
           ++ L+ IG G FG+V     ++TG   A+K++R      +  +  I    D+L      +
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDIL-----VE 57

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL----- 206
                 V++   F  + ++ ++ E L G  +   L K        D + E   Q      
Sbjct: 58  ADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKK-------DTLTEEETQFYIAET 110

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY------KVTARSPTDVNYYKRLPKS 260
           +  +  +H L  IH D+KP+N+L  S  ++K+ D+      K   R+    N    LP  
Sbjct: 111 VLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSD 170

Query: 261 SAIKVIDFGSTAYEHQEHN-----YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
              + ++    A   + +        V T  Y APEV +  G++  CD WS+G I+ E+ 
Sbjct: 171 FTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230

Query: 316 SGEALF 321
            G   F
Sbjct: 231 IGYPPF 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 56.9 bits (137), Expect = 8e-09
 Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 39/257 (15%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDR--ETGETVAIKVVRS---IKKYREAAM-TEIDVLELL 148
           S +  ++ +G G FG+V  CL    +T    A+K +R    + + + A +  E D+L   
Sbjct: 1   SMFVKIKTLGIGAFGEV--CLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILA-- 56

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
              +      V++   F  ++++  V + + G  +   L +     FP  L R    +L 
Sbjct: 57  ---EADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEV--FPEVLARFYIAELT 111

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA--RSPTDVNYYKRLP--KSSAI 263
             +  +H +  IH D+KP+NIL     ++K+ D+ +    R   +  YY++    +  ++
Sbjct: 112 LAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSM 171

Query: 264 KVIDF-----------------GSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDM 304
           +  D                       +HQ    + +V T +Y APEV+L  G++  CD 
Sbjct: 172 EPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDW 231

Query: 305 WSVGCILIELCSGEALF 321
           WSVG IL E+  G+  F
Sbjct: 232 WSVGVILFEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 56.8 bits (137), Expect = 8e-09
 Identities = 68/346 (19%), Positives = 129/346 (37%), Gaps = 75/346 (21%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y +++ +  G+ G+V         + V +K+ +      EA +        L+  +    
Sbjct: 68  YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAML--------LQNVNHPS- 118

Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             +++++        C+V       LY +L K + RP P+D    I +Q+LE + ++H  
Sbjct: 119 -VIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQ 176

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R+IH D+K ENI                            +     + + D G+  +   
Sbjct: 177 RIIHRDVKTENIF---------------------------INDVDQVCIGDLGAAQFPVV 209

Query: 277 EHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL------------CSGEALFQ 322
              +  +  T    APEV+    ++   D+WS G +L E+             + E   +
Sbjct: 210 APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVK 269

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIK--AVLKLP 380
           +  +  HL  +   L   P           E+F R      P     R  I+  ++ + P
Sbjct: 270 SCHS--HLLKIISTLKVHP-----------EEFPRD-----PGSRLVRGFIEYASLERQP 311

Query: 381 RLQNLVMQHVD-HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
             +    Q V+    G    L+  +L +D + R +A + L +P F 
Sbjct: 312 YTRYPCFQRVNLPIDGEF--LVHKMLTFDAAMRPSAEEILNYPMFA 355

Length = 357

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 56.2 bits (135), Expect = 8e-09
 Identities = 71/286 (24%), Positives = 112/286 (39%), Gaps = 56/286 (19%)

Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYDRSGSRC 158
           L +IG G+FG V    +  T E VA+K +  S K+  E     I  ++ L++     +  
Sbjct: 26  LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNT-- 83

Query: 159 VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
           ++ +  +   +   +V E    S  D L  +  +P     +  I    L+ +A++H   +
Sbjct: 84  IEYKGCYLKEHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNM 142

Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH D+K  NIL   P                             +K+ DFGS A +    
Sbjct: 143 IHRDIKAGNILLTEP---------------------------GQVKLADFGS-ASKSSPA 174

Query: 279 NYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGE-ALFQTH--ENLEHLA- 331
           N  V T ++ APEVIL +    +    D+WS+G   IEL   +  LF  +    L H+A 
Sbjct: 175 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 234

Query: 332 -----------------MMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
                             ++  L  IPQ      +     FVRR R
Sbjct: 235 NDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 56.0 bits (135), Expect = 9e-09
 Identities = 55/219 (25%), Positives = 88/219 (40%), Gaps = 42/219 (19%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           +G G  G V       T   +A+KV+      + ++  M+E+++L     Y       + 
Sbjct: 9   LGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEIL-----YKCDSPYIIG 63

Query: 161 IRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
               F   N I I  E M G SL      + YR  P  ++  I   +++ + ++  L+++
Sbjct: 64  FYGAFFVENRISICTEFMDGGSL------DVYRKIPEHVLGRIAVAVVKGLTYLWSLKIL 117

Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STAYEHQEH 278
           H D+KP N+L             V  R                +K+ DFG ST   +   
Sbjct: 118 HRDVKPSNML-------------VNTR--------------GQVKLCDFGVSTQLVNSIA 150

Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
              V T  Y APE I G  +    D+WS+G   +EL  G
Sbjct: 151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALG 189

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 35/220 (15%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAA--MTEIDVLELLKRYDRSGSRC 158
           IG+G+FG+VL    +  G+  A+KV+  ++I K +E    M E +VL  LK         
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVL--LKNVKHP--FL 58

Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           V +   F   + +  V + + G  L+  L++   R FP    R    ++   + ++H L 
Sbjct: 59  VGLHYSFQTADKLYFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLN 116

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +I+ DLKPENIL  S  ++ + D+ +                   I+     ST      
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDFGLC---------------KEGIEHSKTTST------ 155

Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 T  Y APEV+    +    D W +G +L E+  G
Sbjct: 156 ---FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 53/256 (20%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIR 162
           IG G FG V   L + +G  +A+K +RS    +E     +D L+++ R     S C  I 
Sbjct: 12  IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMD-LDVVMR----SSDCPYIV 66

Query: 163 NWFD--YRNHIC-IVFEMLGPSL---YDFLRKNNYRPFPVDLVREIGRQLLECVAFM-HD 215
            ++   +R   C I  E++  SL   Y ++ +      P +++ +I    ++ + ++  +
Sbjct: 67  KFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE 126

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
           L++IH D+KP NIL                           L ++  IK+ DFG +    
Sbjct: 127 LKIIHRDVKPSNIL---------------------------LDRNGNIKLCDFGISGQ-- 157

Query: 276 QEHNYIVSTRH-----YRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
              + I  TR      Y APE I      G+    D+WS+G  L E+ +G+  +    ++
Sbjct: 158 -LVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSV 216

Query: 328 -EHLAMMERVLGPIPQ 342
            + L  +  V G  P 
Sbjct: 217 FDQLTQV--VKGDPPI 230

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 55.3 bits (133), Expect = 2e-08
 Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 39/265 (14%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGSRC 158
           IG G FG+V  C   +TG+  A+K +      +K+    A+ E  +L L+   D     C
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           +     F   + +  + +++ G  L+  L ++    F    +R    +++  +  MH+  
Sbjct: 62  MSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEAEMRFYAAEIILGLEHMHNRF 117

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +++ DLKP NIL     +++I D  +        ++ K+ P +S                
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHAS---------------- 155

Query: 278 HNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA---MM 333
               V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+  +      M 
Sbjct: 156 ----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 211

Query: 334 ERVLGPIPQHMLKRVDKPAEKFVRR 358
             +   +P      +    E  ++R
Sbjct: 212 LTMAVELPDSFSPELRSLLEGLLQR 236

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 55.5 bits (134), Expect = 2e-08
 Identities = 81/346 (23%), Positives = 131/346 (37%), Gaps = 75/346 (21%)

Query: 100 LRKIGE---GTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
             K+GE   G  G V   L R +G  +A K++   IK   R   + E+ VL     ++ +
Sbjct: 3   FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVL-----HECN 57

Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               V     F     I I  E M G SL   L+K      P +++ +I   +L  + ++
Sbjct: 58  SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYL 115

Query: 214 HD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            +  +++H D+KP NIL  S   +K+ D+ V+                   ++ID  S A
Sbjct: 116 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLID--SMA 155

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                 N  V TR Y +PE + G  ++   D+WS+G  L+E+  G               
Sbjct: 156 ------NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRY------------- 196

Query: 333 MERVLGPIP-------QHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
                 PIP       + M  R     E       +       S   + A+ +L  L  +
Sbjct: 197 ------PIPPPDAKELEAMFGRPVSEGEAKESHRPVS-GHPPDSPRPM-AIFEL--LDYI 246

Query: 386 VMQHV-----DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           V +          +    D +   L+ +P  R    +  KHPF  R
Sbjct: 247 VNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 57/238 (23%), Positives = 93/238 (39%), Gaps = 67/238 (28%)

Query: 102 KIGEGTFGQVLDC-LDRETGET--VAIKVVRSIKK-------YREAA-MTEIDVLELLKR 150
           K+G+G+FG V         G+   VA+K ++S K         +EAA M  +D   L++ 
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 151 Y----DRSGSRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGR 204
           Y                       + +V E+  LG SL D LRK+    F +  + +   
Sbjct: 62  YGVVLTHP----------------LMMVTELAPLG-SLLDRLRKDALGHFLISTLCDYAV 104

Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+   + ++   R IH DL   NIL  S + +KI D+ +           + LP      
Sbjct: 105 QIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLM----------RALP------ 148

Query: 265 VIDFGSTAYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIELCS 316
                      Q  ++ V   H +      APE +    +S+  D+W  G  L E+ +
Sbjct: 149 -----------QNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFT 195

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 54.7 bits (131), Expect = 2e-08
 Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 35/245 (14%)

Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  +++ L R+D+       
Sbjct: 13  KLGQGCFGEVW--MGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKL-RHDKLVPLYAV 69

Query: 161 IRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
           +         I IV E +G  SL DFL++ + +   +  + ++  Q+ + +A++  +  I
Sbjct: 70  VS-----EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYI 124

Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
           H DL+  NIL       KI D+ + AR   D  Y  R      IK               
Sbjct: 125 HRDLRAANILVGDNLVCKIADFGL-ARLIEDNEYTARQGAKFPIK--------------- 168

Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER-VL 337
                  + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER   
Sbjct: 169 -------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR 221

Query: 338 GPIPQ 342
            P PQ
Sbjct: 222 MPCPQ 226

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 54.6 bits (131), Expect = 2e-08
 Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 34/241 (14%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++++K+G G FG+V   +    G T VA+K ++      E+ + E  +++ L+       
Sbjct: 9   QLIKKLGNGQFGEVW--MGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRH-----D 61

Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + VQ+         I IV E +   SL DFL+    R   +  + ++  Q+   +A++  
Sbjct: 62  KLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 120

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
           +  IH DL+  NIL       KI D+ + AR   D  Y  R      IK           
Sbjct: 121 MNYIHRDLRSANILVGDGLVCKIADFGL-ARLIEDNEYTARQGAKFPIK----------- 168

Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMME 334
                      + APE  L   ++   D+WS G +L EL + G   +    N E L  +E
Sbjct: 169 -----------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE 217

Query: 335 R 335
           R
Sbjct: 218 R 218

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 54.6 bits (131), Expect = 3e-08
 Identities = 77/344 (22%), Positives = 128/344 (37%), Gaps = 91/344 (26%)

Query: 97  YKILRKIGEGTFGQVL---DCLDRETGETVAIKVVRSI-----KKYREAAMTEIDVLELL 148
           +++L+ +G G +G+V         +TG+  A+KV++        K  E   TE +VLE +
Sbjct: 2   FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHV 61

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
               R     V +   F     + ++ + + G  ++  L + +   F  D VR    +++
Sbjct: 62  ----RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDN--FSEDEVRFYSGEII 115

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             +  +H L +++ D+K ENIL  S  ++ + D+ ++    +                  
Sbjct: 116 LALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS------------------ 157

Query: 268 FGSTAYEHQEHNY-IVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
                 E +E  Y    T  Y APE+I G  G     D WS+G ++ EL +G        
Sbjct: 158 ------EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTG-------- 203

Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
                                     A  F   G  +  +   SR  +K     P     
Sbjct: 204 --------------------------ASPFTLEGERN-TQSEVSRRILKCDPPFPSFIGP 236

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
             Q          DLL  LLR DP  RL      A +  +HPFF
Sbjct: 237 EAQ----------DLLHKLLRKDPKKRLGAGPQGASEIKEHPFF 270

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 53.9 bits (129), Expect = 5e-08
 Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 39/242 (16%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT----EIDVLELLKRYD 152
           ++IL+ IG G FG+V     +   +  A+K++   +  + A       E DVL      +
Sbjct: 3   FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL-----VN 57

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   +   F   N++ +V +  +G  L   L K   R  P D+ R    +++  + 
Sbjct: 58  GDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYLAEMVIAID 116

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
            +H L  +H D+KP+NIL     ++++ D+                   S +K+++ G+ 
Sbjct: 117 SVHQLHYVHRDIKPDNILMDMNGHIRLADF------------------GSCLKLMEDGTV 158

Query: 272 AYEHQEHNYIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILIELCSGEALFQTHEN 326
                + +  V T  Y +PE++     G G   P CD WS+G  + E+  GE  F     
Sbjct: 159 -----QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213

Query: 327 LE 328
           +E
Sbjct: 214 VE 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 53.0 bits (127), Expect = 8e-08
 Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 44/242 (18%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
           S   ++++IG G FG V      E  + VAIK +R      E AM+E D +E  +   + 
Sbjct: 4   SELTLVQEIGSGQFGLVWLGYWLEKRK-VAIKTIR------EGAMSEEDFIEEAQVMMKL 56

Query: 154 SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
           S  + VQ+      R+ IC+VFE M    L D+LR    + F  + +  +   + E +A+
Sbjct: 57  SHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGK-FSQETLLGMCLDVCEGMAY 115

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +    +IH DL   N L                           + ++  +KV DFG T 
Sbjct: 116 LESSNVIHRDLAARNCL---------------------------VGENQVVKVSDFGMTR 148

Query: 273 YEHQEHNYIVSTR-----HYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHEN 326
           +   +  Y  ST       + +PEV     +S   D+WS G ++ E+ S G+  ++   N
Sbjct: 149 FVLDDQ-YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN 207

Query: 327 LE 328
            E
Sbjct: 208 SE 209

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 53.5 bits (128), Expect = 1e-07
 Identities = 59/254 (23%), Positives = 100/254 (39%), Gaps = 62/254 (24%)

Query: 95  SRYKILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           + ++++  +  G FG++  C L   T E  A + V S  + +           L+ +  +
Sbjct: 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCE------RLIAKRVK 201

Query: 154 SGSR-CVQIRN---WFDYRNH--ICIVFEMLGPSLYDFLRKNNY---------------- 191
           +GSR  +Q+ N        NH  I  + E+L      ++    Y                
Sbjct: 202 AGSRAAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWK 261

Query: 192 -RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
            RP  +   R I +QLL  V ++HD +LIH D+K ENI                      
Sbjct: 262 DRPL-LKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIF--------------------- 299

Query: 251 VNYYKRLPKSSAIKVIDFGS-TAYEHQEHNY---IVSTRHYRAPEVILGLGWSYPCDMWS 306
                 L     I + DFG+   +E +   +    V T    +PE++ G G+    D+WS
Sbjct: 300 ------LNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWS 353

Query: 307 VGCILIELCSGEAL 320
            G IL+++ S +  
Sbjct: 354 CGLILLDMLSHDFC 367

Length = 501

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 53.1 bits (127), Expect = 1e-07
 Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 66/247 (26%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS-- 154
           Y++++ IG G FG+V              ++VR     +  AM  +   E++KR D +  
Sbjct: 45  YEVVKVIGRGAFGEV--------------QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFF 90

Query: 155 -----------GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
                          VQ+   F    ++ +V E M G  L + +  +NY   P    R  
Sbjct: 91  WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFY 147

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
             +++  +  +H +  IH D+KP+N+L                           L KS  
Sbjct: 148 TAEVVLALDAIHSMGFIHRDVKPDNML---------------------------LDKSGH 180

Query: 263 IKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIEL 314
           +K+ DFG+    ++E     +  V T  Y +PEV+   G    +   CD WSVG  L E+
Sbjct: 181 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 240

Query: 315 CSGEALF 321
             G+  F
Sbjct: 241 LVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 52.2 bits (125), Expect = 2e-07
 Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 32/240 (13%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K+++K+G G FG+V           VAIK ++      EA + E ++++ L+       R
Sbjct: 9   KLVKKLGAGQFGEVWMGYYNGH-TKVAIKSLKQGSMSPEAFLAEANLMKQLQH-----PR 62

Query: 158 CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
            V++      +  I I+ E M   SL DFL+        ++ + ++  Q+ E +AF+   
Sbjct: 63  LVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK 121

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D  Y  R      IK            
Sbjct: 122 NYIHRDLRAANILVSETLCCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 168

Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 169 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLER 218

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 34/241 (14%)

Query: 98  KILRKIGEGTFGQV-LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K+ +K+G G FG+V +   ++ T   VA+K ++      EA + E +V++ L+       
Sbjct: 9   KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTLQH-----D 61

Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + V++ +    +  I I+ E M   SL DFL+ +     P+  + +   Q+ E +AF+  
Sbjct: 62  KLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 120

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
              IH DL+  NIL  +    KI D+ + AR   D  Y  R      IK           
Sbjct: 121 RNYIHRDLRAANILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIK----------- 168

Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMME 334
                      + APE I    ++   D+WS G +L+E+ + G   +    N E +  +E
Sbjct: 169 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 217

Query: 335 R 335
           R
Sbjct: 218 R 218

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 52.1 bits (125), Expect = 3e-07
 Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 58/243 (23%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS-- 154
           + +++ IG G FG+V              ++VR     +  AM  +   E++KR D +  
Sbjct: 45  FDVIKVIGRGAFGEV--------------QLVRHKSSKQVYAMKLLSKFEMIKRSDSAFF 90

Query: 155 -----------GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
                          VQ+   F    ++ +V E M G  L + +  +NY   P    R  
Sbjct: 91  WEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLM--SNYD-IPEKWARFY 147

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
             +++  +  +H +  IH D+KP+N+L     +LK+ D+    +          +  +  
Sbjct: 148 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK----------MDANGM 197

Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGE 318
           ++      TA         V T  Y +PEV+   G    +   CD WSVG  L E+  G+
Sbjct: 198 VRC----DTA---------VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 244

Query: 319 ALF 321
             F
Sbjct: 245 TPF 247

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 51.1 bits (122), Expect = 3e-07
 Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 40/243 (16%)

Query: 102 KIGEGTFGQVLDCL--DRETGETVAIKVVRSIKK---YREAAMTEIDVLELLKR-YDRSG 155
           ++G G FG V   +   +++ +TVA+K++++       ++  + E +V++ L   Y    
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRM 61

Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               +  +W        +V E+  LGP L  FL+KN  +      + E+  Q+   + ++
Sbjct: 62  IGICEAESWM-------LVMELAELGP-LNKFLQKN--KHVTEKNITELVHQVSMGMKYL 111

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
            +   +H DL   N+L V+  Y KI D+ ++     D NYYK                A 
Sbjct: 112 EETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK----------------AK 155

Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAM 332
            H +         + APE +    +S   D+WS G ++ E  S G+  ++  +  E   M
Sbjct: 156 THGKWPV-----KWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQM 210

Query: 333 MER 335
           +E 
Sbjct: 211 IES 213

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 51.9 bits (124), Expect = 3e-07
 Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 58/243 (23%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS-- 154
           Y +++ IG G FG+V              ++VR     +  AM  +   E++KR D +  
Sbjct: 45  YDVVKVIGRGAFGEV--------------QLVRHKSSQKVYAMKLLSKFEMIKRSDSAFF 90

Query: 155 -----------GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
                          VQ+   F    ++ +V E M G  L + +  +NY   P    +  
Sbjct: 91  WEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNY-DVPEKWAKFY 147

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
             +++  +  +H + LIH D+KP+N+L     +LK+ D+                   + 
Sbjct: 148 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADF------------------GTC 189

Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGE 318
           +K+ + G         +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+
Sbjct: 190 MKMDETGMV-----RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGD 244

Query: 319 ALF 321
             F
Sbjct: 245 TPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 51.0 bits (122), Expect = 3e-07
 Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 36/245 (14%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVA-IKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           S    ++++G G FG V        G+  A IKV  +IK   E AM+E D +E  K   +
Sbjct: 4   SELTFMKELGSGQFGVV------HLGKWRAQIKV--AIKAINEGAMSEEDFIEEAKVMMK 55

Query: 154 -SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
            S  + VQ+      +  + IV E M    L ++LR+   +    D++  + + + E + 
Sbjct: 56  LSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGK-LSKDMLLSMCQDVCEGME 114

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++     IH DL   N L  S   +K+ D+ +T R   D  Y         +K       
Sbjct: 115 YLERNSFIHRDLAARNCLVSSTGVVKVSDFGMT-RYVLDDEYTSSSGAKFPVK------- 166

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHL 330
                          +  PEV     +S   D+WS G ++ E+ + G+  F+   N E +
Sbjct: 167 ---------------WSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVV 211

Query: 331 AMMER 335
            M+ R
Sbjct: 212 EMISR 216

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 51.4 bits (123), Expect = 3e-07
 Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 39/244 (15%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYR--EAAMTEIDVLELLKRYDRSGSR- 157
           +G+G FG+V  C  R TG+  A K +  + +KK +  E AM E  +L       +  SR 
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILA------KVHSRF 54

Query: 158 CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRP-FPVDLVREIGRQLLECVAFMH 214
            V +   F  +  +C+V  ++  G   Y     +   P FP         Q++  +  +H
Sbjct: 55  IVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH 114

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
             R+I+ DLKPEN+L  +   ++I D  +                  A+++ D  S    
Sbjct: 115 QRRIIYRDLKPENVLLDNDGNVRISDLGL------------------AVELKDGQSKTKG 156

Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH-ENLEHLAMM 333
           +        T  + APE++ G  + +  D +++G  L E+ +    F+   E +E+  + 
Sbjct: 157 Y------AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 210

Query: 334 ERVL 337
           +R+L
Sbjct: 211 QRIL 214

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 51.2 bits (122), Expect = 3e-07
 Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 38/232 (16%)

Query: 89  LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELL 148
           L  N    Y++++++G GT+G V    +  TGE  A+K+++ ++   + ++ + ++  + 
Sbjct: 3   LRRNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIK-LEPGDDFSLIQQEIFMV- 60

Query: 149 KRYDRSGSRCVQIRNWFDY--RNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQ 205
               +    C  +  +  Y  R  + I  E  G  SL D        P     +  + R+
Sbjct: 61  ----KECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRE 114

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
            L+ +A++H    +H D+K  NIL      +K+ D+ V A+    +   K          
Sbjct: 115 TLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSF-------- 166

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIEL 314
                           + T ++ APEV       G++  CD+W+VG   IEL
Sbjct: 167 ----------------IGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 51.1 bits (122), Expect = 4e-07
 Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 43/237 (18%)

Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGS 156
           + +G+G+FG+V     + T +  AIK ++     +    E  M E  VL L   +     
Sbjct: 1   KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH----P 56

Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVAFMH 214
               +   F  + ++  V E L      F  ++ ++    DL R      +++  + F+H
Sbjct: 57  FLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHK---FDLPRATFYAAEIICGLQFLH 113

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG---ST 271
              +++ DLK +NIL                           L     IK+ DFG     
Sbjct: 114 SKGIVYRDLKLDNIL---------------------------LDTDGHIKIADFGMCKEN 146

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
                +      T  Y APE++LG  ++   D WS G +L E+  G++ F  H+  E
Sbjct: 147 MLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 50.5 bits (121), Expect = 5e-07
 Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 56/271 (20%)

Query: 99  ILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSG 155
           ++ ++G G +G V       TG  +A+K +R+    ++ +   M ++D+           
Sbjct: 5   VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLM-DLDI-------SMRS 56

Query: 156 SRCVQIRNWFDY---RNHICIVFEMLGPSLYDFLRKNNYRP--FPVDLVREIGRQLLECV 210
             C     ++        + I  E++  SL  F +K   +    P D++ +I   +++ +
Sbjct: 57  VDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKAL 116

Query: 211 AFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
            ++H  L +IH D+KP N+L      +K+ D+ +   S   V+        S  K ID G
Sbjct: 117 EYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGI---SGYLVD--------SVAKTIDAG 165

Query: 270 STAYEHQEHNYIVSTRHYRAPEVILG----LGWSYPCDMWSVGCILIELCSGEALFQT-H 324
                          + Y APE I       G+    D+WS+G  +IEL +G   + +  
Sbjct: 166 C--------------KPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK 211

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKF 355
              + L  +  V  P PQ        PAEKF
Sbjct: 212 TPFQQLKQV--VEEPSPQ-------LPAEKF 233

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 50.4 bits (121), Expect = 5e-07
 Identities = 59/218 (27%), Positives = 91/218 (41%), Gaps = 30/218 (13%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K+ RK+G G FG+V       T + VA+K ++      EA + E  +++ L R+D+    
Sbjct: 9   KLERKLGAGQFGEVWMGTWNGTTK-VAVKTLKPGTMSPEAFLQEAQIMKKL-RHDK---- 62

Query: 158 CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
            VQ+         I IV E M   SL DFL+    +   +  + ++  Q+ E +A++   
Sbjct: 63  LVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR 122

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL   NIL       KI D+ + AR   D  Y  R      IK            
Sbjct: 123 NYIHRDLAARNILVGENLVCKIADFGL-ARLIEDDEYTAREGAKFPIK------------ 169

Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                     + APE      ++   D+WS G +L E+
Sbjct: 170 ----------WTAPEAANYGRFTIKSDVWSFGILLTEI 197

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 50.4 bits (120), Expect = 7e-07
 Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 39/228 (17%)

Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR--- 157
           R IG G++ +VL    ++T    A+KVV   KK       +ID ++  K      S    
Sbjct: 1   RVIGRGSYAKVLLVRLKKTERIYAMKVV---KKELVNDDEDIDWVQTEKHVFEQASNHPF 57

Query: 158 CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
            V + + F   + +  V E +  G  ++   R+   R  P +  R    ++   + ++H+
Sbjct: 58  LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHE 114

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARS--PTDVNYYKRLPKSSAIKVIDFGSTAY 273
             +I+ DLK +N+L  S  ++K+ DY +      P D                       
Sbjct: 115 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--------------------- 153

Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
                +    T +Y APE++ G  + +  D W++G ++ E+ +G + F
Sbjct: 154 -----STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 50.3 bits (120), Expect = 8e-07
 Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 36/235 (15%)

Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYDRSGS 156
           R +G+G+FG+V+    +E+G   A+KV++     +    E  MTE  +L L     R+  
Sbjct: 1   RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLA----RNHP 56

Query: 157 RCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              Q+   F   + +  V E + G  L   ++K+  R F     R    ++   + F+HD
Sbjct: 57  FLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHD 114

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             +I+ DLK +N+L     + K+ D+ +                      I  G T    
Sbjct: 115 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG------------------IFNGKTT--- 153

Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
              +    T  Y APE++  + +    D W++G +L E+  G A F+  EN + L
Sbjct: 154 ---STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA-ENEDDL 204

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 50.1 bits (120), Expect = 9e-07
 Identities = 66/254 (25%), Positives = 107/254 (42%), Gaps = 45/254 (17%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           + L +IG GT GQV     ++TG  +A+K +R      E     +D+  +LK +D     
Sbjct: 18  ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHD----- 72

Query: 158 C---VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
           C   V+   +F   + + I  E++   L D L K    P P D+   +G+  +  V  +H
Sbjct: 73  CPYIVKCYGYFITDSDVFICMELMSTCL-DKLLKRIQGPIPEDI---LGKMTVAIVKALH 128

Query: 215 DLR----LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            L+    +IH D+KP NIL  +   +K+ D+ ++           RL  S A K    G 
Sbjct: 129 YLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISG----------RLVDSKA-KTRSAGC 177

Query: 271 TAY---EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
            AY   E  +          RA             D+WS+G  L+EL +G+  F      
Sbjct: 178 AAYMAPERIDPPDPNPKYDIRA-------------DVWSLGISLVELATGQ--FPYKNCK 222

Query: 328 EHLAMMERVLGPIP 341
               ++ ++L   P
Sbjct: 223 TEFEVLTKILQEEP 236

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 50.0 bits (119), Expect = 9e-07
 Identities = 46/223 (20%), Positives = 97/223 (43%), Gaps = 29/223 (13%)

Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           R IG G++ +VL    ++  +  A+KVV+    + +  +  +   + +     S    V 
Sbjct: 1   RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60

Query: 161 IRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
           + + F   + + +V E +  G  ++   R+   R  P +  R    ++   + F+H+  +
Sbjct: 61  LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHERGI 117

Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           I+ DLK +N+L  +  ++K+ DY +                   +   D  ST       
Sbjct: 118 IYRDLKLDNVLLDADGHIKLTDYGMC---------------KEGLGPGDTTST------- 155

Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
                T +Y APE++ G  + +  D W++G ++ E+ +G + F
Sbjct: 156 --FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 31/240 (12%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K+++K+G G FG+V       + + VA+K ++      +A + E ++++ L+       +
Sbjct: 9   KLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTLQH-----DK 62

Query: 158 CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
            V++         I I+ E M   SL DFL+ +      +  + +   Q+ E +A++   
Sbjct: 63  LVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 122

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  N+L       KI D+ + AR   D  Y  R      IK            
Sbjct: 123 NYIHRDLRAANVLVSESLMCKIADFGL-ARVIEDNEYTAREGAKFPIK------------ 169

Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G+  +    N + ++ ++R
Sbjct: 170 ----------WTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQR 219

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 50.3 bits (120), Expect = 1e-06
 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 27/144 (18%)

Query: 172 CIVFEMLGPSLYDFLRKNNYRPFPVDL--VREIGRQLLECVAFMHDLRLIHTDLKPENIL 229
           C+V       LY +L     R  P+ L  V  + RQLL  + ++H   +IH D+K EN+L
Sbjct: 236 CLVLPKYRSDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVL 292

Query: 230 FVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRA 289
              PE + + D+            + R   S+                H  I  T    A
Sbjct: 293 VNGPEDICLGDFGAAC--------FARGSWSTPF--------------HYGIAGTVDTNA 330

Query: 290 PEVILGLGWSYPCDMWSVGCILIE 313
           PEV+ G  ++   D+WS G ++ E
Sbjct: 331 PEVLAGDPYTPSVDIWSAGLVIFE 354

Length = 461

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 39/223 (17%)

Query: 96  RYKILRKIGEGTFGQVLDCLDR--ETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           +Y IL  +  G+ G+V  C     E  + V +K V   K        EID+L       +
Sbjct: 93  QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPG----REIDIL-------K 141

Query: 154 SGSRCVQIR--NWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
           + S    I   + + +++ +C+V       L+ ++ ++   P P++    I R+LLE +A
Sbjct: 142 TISHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSG--PLPLEQAITIQRRLLEALA 199

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H   +IH D+K ENI    PE   + D+   A    D +     P+        +G  
Sbjct: 200 YLHGRGIIHRDVKTENIFLDEPENAVLGDFG--AACKLDAHPDT--PQ-------CYG-- 246

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                       T    +PE++    +    D+WS G +L E+
Sbjct: 247 ---------WSGTLETNSPELLALDPYCAKTDIWSAGLVLFEM 280

Length = 392

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 59/245 (24%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS-- 154
           ++IL+ IG G FG+V     + TG+  A+K+   + K+           E+LKR + +  
Sbjct: 3   FEILKVIGRGAFGEVAVVKMKNTGQVYAMKI---LNKW-----------EMLKRAETACF 48

Query: 155 -GSRCVQI---RNW-------FDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREI 202
              R V +   R W       F   N++ +V +  +G  L   L K   R  P D+ R  
Sbjct: 49  REERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFY 107

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK-SS 261
             +++  +  +H L  +H D+KP+N+L                    D N + RL    S
Sbjct: 108 LAEMVLAIDSVHQLGYVHRDIKPDNVLL-------------------DKNGHIRLADFGS 148

Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-----WSYPCDMWSVGCILIELCS 316
            ++++  G+        N  V T  Y +PE++  +      +   CD WS+G  + E+  
Sbjct: 149 CLRLLADGTVQ-----SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLY 203

Query: 317 GEALF 321
           GE  F
Sbjct: 204 GETPF 208

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 14/147 (9%)

Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRSGSR 157
           + +IG G  G V   + R TG   A+KV+    +   R     EI++L      D +   
Sbjct: 79  VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILR-----DVNHPN 133

Query: 158 CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
            V+  + FD+   I ++ E M G SL           F  D+     RQ+L  +A++H  
Sbjct: 134 VVKCHDMFDHNGEIQVLLEFMDGGSLEG--THIADEQFLADV----ARQILSGIAYLHRR 187

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKV 243
            ++H D+KP N+L  S + +KI D+ V
Sbjct: 188 HIVHRDIKPSNLLINSAKNVKIADFGV 214

Length = 353

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 62/235 (26%), Positives = 98/235 (41%), Gaps = 43/235 (18%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAA--MTEIDVLELLKRYDRSGSRC 158
           IG+G+FG+VL    +   +  A+KV+  ++I K +E    M+E +VL  LK         
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVL--LKNVKHP--FL 58

Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           V +   F   + +  V + + G  L+  L++   R F     R    ++   + ++H L 
Sbjct: 59  VGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLN 116

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +++ DLKPENIL                           L     I + DFG    E+ E
Sbjct: 117 IVYRDLKPENIL---------------------------LDSQGHIVLTDFG-LCKENIE 148

Query: 278 HNYIVS----TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           HN   S    T  Y APEV+    +    D W +G +L E+  G   F +    E
Sbjct: 149 HNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 203

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 47/252 (18%)

Query: 99  ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
            L+++G G FG V     +  G+  VAIK+++      E +M+E + +E  K     S  
Sbjct: 8   FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMKLSHE 59

Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + VQ+      +  I IV E M    L ++LR++  R  P  L+ E+ + + E +A++  
Sbjct: 60  KLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLL-EMCKDVCEGMAYLES 118

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE- 274
            + IH DL   N L                     V+          +KV DFG + Y  
Sbjct: 119 KQFIHRDLAARNCL---------------------VD------DQGCVKVSDFGLSRYVL 151

Query: 275 HQEHNYIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEA---LFQTHENL 327
             E+   V ++    +  PEV+L   +S   D+W+ G ++ E+ S G+     F   E +
Sbjct: 152 DDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETV 211

Query: 328 EHLAMMERVLGP 339
           E ++   R+  P
Sbjct: 212 EKVSQGLRLYRP 223

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 74/351 (21%), Positives = 123/351 (35%), Gaps = 114/351 (32%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ L  +G G FG+VL    ++TGE  AIK    +KK    A  E++ L   KR   + +
Sbjct: 1   FRCLAVLGRGHFGKVLLAEYKKTGELYAIKA---LKKGDIIARDEVESLMCEKRIFETAN 57

Query: 157 R-----CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE--- 208
                  V +   F   +H+C V E                    DL+  I   +     
Sbjct: 58  SERHPFLVNLFACFQTEDHVCFVMEYAAGG---------------DLMMHIHTDVFSEPR 102

Query: 209 ------CVA----FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
                 CV     ++H+ ++++ DLK +N+L  +  ++KI D+               L 
Sbjct: 103 AVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFG--------------LC 148

Query: 259 KSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
           K      + FG         +    T  + APEV+    ++   D W +G ++ E+  GE
Sbjct: 149 KEG----MGFGDRT------STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGE 198

Query: 319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
           + F   +  E    +       P+ +                        SRE+I     
Sbjct: 199 SPFPGDDEEEVFDSIVNDEVRYPRFL------------------------SREAIS---- 230

Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
                                +++ LLR +P  RL      A D  K PFF
Sbjct: 231 ---------------------IMRRLLRRNPERRLGSGEKDAEDVKKQPFF 260

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 60/263 (22%), Positives = 102/263 (38%), Gaps = 59/263 (22%)

Query: 100 LRKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
           L+++G G FG V        G+      VAIK++R      E AM+E D +E  K   + 
Sbjct: 9   LKELGSGQFGVV------HLGKWRGKIDVAIKMIR------EGAMSEDDFIEEAKVMMKL 56

Query: 154 SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
           S    VQ+      +  I IV E M    L ++LR+   +    + + ++   + E + +
Sbjct: 57  SHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGK-LGTEWLLDMCSDVCEAMEY 115

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +     IH DL   N L V  + +                          +KV DFG   
Sbjct: 116 LESNGFIHRDLAARNCL-VGEDNV--------------------------VKVSDFGLAR 148

Query: 273 YE-HQEHNYIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           Y    ++     T+    +  PEV     +S   D+WS G ++ E+ S   +   +E   
Sbjct: 149 YVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKM--PYERFS 206

Query: 329 HLAMMERVLGPIPQHMLKRVDKP 351
           +  ++E V          R+ +P
Sbjct: 207 NSEVVESV------SAGYRLYRP 223

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 62/276 (22%), Positives = 103/276 (37%), Gaps = 77/276 (27%)

Query: 101 RKIGEGTFGQVLDCLDRETGE---TVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           +++G G FG V+  +          VA+K    +K+   AA  +    E L        R
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKT---LKQEHIAAGKK----EFL--------R 45

Query: 158 CVQIRNWFDYRN-----------HICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGR 204
              +    D+              + +V E+  LGP L  +L+K   R  PV  ++E+  
Sbjct: 46  EASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLGP-LLKYLKKR--REIPVSDLKELAH 102

Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+   +A++     +H DL   N+L V+    KI D+ ++       +YY+         
Sbjct: 103 QVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR--------- 153

Query: 265 VIDFGSTAYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIELCS-G 317
                             +T   R      APE I    +S   D+WS G  L E  S G
Sbjct: 154 ------------------ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYG 195

Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAE 353
              +   +  E +AM+E           +R+ +P E
Sbjct: 196 AKPYGEMKGAEVIAMLESG---------ERLPRPEE 222

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
           ++ + ++G G  G V     + +G  +A K++   IK   R   + E+ VL     ++ +
Sbjct: 7   FEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL-----HECN 61

Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               V     F     I I  E M G SL   L+K      P  ++ ++   +++ + ++
Sbjct: 62  SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYL 119

Query: 214 HDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            +  +++H D+KP NIL  S   +K+ D+ V+                   ++ID  S A
Sbjct: 120 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLID--SMA 159

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 N  V TR Y +PE + G  +S   D+WS+G  L+E+  G
Sbjct: 160 ------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIG 198

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 48.5 bits (115), Expect = 3e-06
 Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 37/225 (16%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
           ++ + ++G G  G V     + +G  +A K++   IK   R   + E+ VL     ++ +
Sbjct: 7   FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL-----HECN 61

Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               V     F     I I  E M G SL   L++   +  P +++ ++   +L  +A++
Sbjct: 62  SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYL 119

Query: 214 HDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            +  +++H D+KP NIL  S   +K+ D+ V+                   ++ID  S A
Sbjct: 120 REKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLID--SMA 159

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 N  V TR Y +PE + G  +S   D+WS+G  L+EL  G
Sbjct: 160 ------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIG 198

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 48.5 bits (115), Expect = 3e-06
 Identities = 59/263 (22%), Positives = 106/263 (40%), Gaps = 44/263 (16%)

Query: 97  YKILRKIGEGTFGQVL---DCLDRETGETVAIKVVRSIK-----KYREAAMTEIDVLELL 148
           +++L+ +G G +G+V         ++G+  A+KV++        K  E   TE  VLE +
Sbjct: 2   FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 61

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
               R     V +   F     + ++ + + G  L+  L +     F    V+    +++
Sbjct: 62  ----RQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRER--FKEQEVQIYSGEIV 115

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             +  +H L +I+ D+K ENIL  S  ++ + D+ ++     D                 
Sbjct: 116 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV--------------- 160

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEALFQTH- 324
               AY          T  Y AP+++ G   G     D WS+G ++ EL +G + F    
Sbjct: 161 --ERAYS------FCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG 212

Query: 325 ENLEHLAMMERVLG---PIPQHM 344
           E      +  R+L    P PQ M
Sbjct: 213 EKNSQAEISRRILKSEPPYPQEM 235

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 48.3 bits (115), Expect = 3e-06
 Identities = 56/245 (22%), Positives = 94/245 (38%), Gaps = 47/245 (19%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGSRC 158
           +G+G+FG+V+    + T E  AIK ++          E  M E  VL L           
Sbjct: 3   LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLAL-------AWEH 55

Query: 159 ---VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
                +   F  + H+  V E L      F  +++ R F     R    +++  + F+H 
Sbjct: 56  PFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGR-FDEARARFYAAEIICGLQFLHK 114

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG---STA 272
             +I+ DLK +N+L                           L K   IK+ DFG      
Sbjct: 115 KGIIYRDLKLDNVL---------------------------LDKDGHIKIADFGMCKENM 147

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEHL 330
               + +    T  Y APE++ G  ++   D WS G +L E+  G++ F  +  + L   
Sbjct: 148 NGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS 207

Query: 331 AMMER 335
            + +R
Sbjct: 208 ILNDR 212

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 47.8 bits (114), Expect = 4e-06
 Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 48/232 (20%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDR 153
             + + RK+G G FG+V + L +     VAIK+++S    + +    E+  L+ L R+  
Sbjct: 6   EEFTLERKLGSGYFGEVWEGLWKNRVR-VAIKILKSDDLLKQQDFQKEVQALKRL-RHKH 63

Query: 154 --------SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                   S    V I           I   M   SL  FLR    +  PV  + ++  Q
Sbjct: 64  LISLFAVCSVGEPVYI-----------ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQ 112

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYL-KIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           + E +A++ +   IH DL   NIL V  + + K+ D+ + AR   +  Y   L     I 
Sbjct: 113 VAEGMAYLEEQNSIHRDLAARNIL-VGEDLVCKVADFGL-ARLIKEDVY---LSSDKKIP 167

Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                                 + APE      +S   D+WS G +L E+ +
Sbjct: 168 Y--------------------KWTAPEAASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 47.8 bits (114), Expect = 4e-06
 Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 31/240 (12%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           ++LRK+G G FG+V + L   T   VA+K ++      +  + E  +++ L+       +
Sbjct: 9   QLLRKLGAGQFGEVWEGLWNNTTP-VAVKTLKPGTMDPKDFLAEAQIMKKLRH-----PK 62

Query: 158 CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
            +Q+         I IV E M   SL ++L+    R   +  + ++  Q+   +A++   
Sbjct: 63  LIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ 122

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL   N+L       K+ D+ + AR   +  Y  R      IK            
Sbjct: 123 NYIHRDLAARNVLVGENNICKVADFGL-ARVIKEDIYEAREGAKFPIK------------ 169

Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE  L   +S   D+WS G +L E+ + G   +    N E L  +++
Sbjct: 170 ----------WTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQ 219

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 47.4 bits (112), Expect = 5e-06
 Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 34/237 (14%)

Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 13  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 65

Query: 161 IRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
           +         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +
Sbjct: 66  LYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 124

Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
           H DL+  NIL       K+ D+ + AR   D  Y  R      IK               
Sbjct: 125 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK--------------- 168

Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                  + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 169 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 218

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 47.9 bits (114), Expect = 5e-06
 Identities = 72/335 (21%), Positives = 131/335 (39%), Gaps = 81/335 (24%)

Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR--- 157
           R IG G++ +VL    ++T    A+KV   IKK       +ID ++  K    + S    
Sbjct: 1   RVIGRGSYAKVLLVELKKTRRIYAMKV---IKKELVNDDEDIDWVQTEKHVFETASNHPF 57

Query: 158 CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
            V + + F   + +  V E +  G  ++   R+   R  P +  R    ++   + F+H+
Sbjct: 58  LVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHE 114

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             +I+ DLK +N+L  +  ++K+ DY +                   I+  D  ST    
Sbjct: 115 RGIIYRDLKLDNVLLDAEGHIKLTDYGMC---------------KEGIRPGDTTST---- 155

Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                   T +Y APE++ G  + +  D W++G ++ E+ +G + F      ++      
Sbjct: 156 -----FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN------ 204

Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG 395
                        D+  E ++ +  L+              +++PR  ++    V     
Sbjct: 205 ------------PDQNTEDYLFQVILEKQ------------IRIPRSLSVKASSV----- 235

Query: 396 YLIDLLQGLLRYDPSSRLTAH------DALKHPFF 424
                L+G L  DP  RL  H      D   HPFF
Sbjct: 236 -----LKGFLNKDPKERLGCHPQTGFRDIKSHPFF 265

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 47.6 bits (113), Expect = 8e-06
 Identities = 70/270 (25%), Positives = 105/270 (38%), Gaps = 60/270 (22%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA----AMTEIDVL------ 145
           +Y I R +G G  G VL       GE  A+KVV  ++   EA    A  E+  L      
Sbjct: 33  KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVV-DMEGMSEADKNRAQAEVCCLLNCDFF 91

Query: 146 -------ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL 198
                  +  K+  R+    + I    DY N   +  E+         R    R F    
Sbjct: 92  SIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKS-------RAKTNRTFREHE 144

Query: 199 VREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY---KVTARSPTDVNYYK 255
              +  Q+L  V  +H   +IH D+K  NIL  S   +K+ D+   K+ A + +D     
Sbjct: 145 AGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD----- 199

Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
                      D G T            T +Y APE+     +S   DM+S+G +L EL 
Sbjct: 200 -----------DVGRT---------FCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELL 239

Query: 316 SGEALFQTHENLEHLAMMERVLG----PIP 341
           + +  F   EN+E +  M + L     P+P
Sbjct: 240 TLKRPFDG-ENMEEV--MHKTLAGRYDPLP 266

Length = 496

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 46.9 bits (111), Expect = 9e-06
 Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 43/241 (17%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYD 152
           +  L  +G+G+FG+V+    + T E  AIK+++     +    E  M E  VL L     
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLAL----- 56

Query: 153 RSGSR--CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYR-PFPVDLVREIGRQLL 207
            SG      Q+ + F   + +  V E +  G  +Y   +   ++ P  V    EI   L 
Sbjct: 57  -SGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLF 115

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
               F+H   +I+ DLK +N++  S  ++KI D+ +   +  D                 
Sbjct: 116 ----FLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD----------------- 154

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
            G T            T  Y APE+I    +    D W+ G +L E+ +G+A F+  +  
Sbjct: 155 -GVTT------KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 207

Query: 328 E 328
           E
Sbjct: 208 E 208

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 41/238 (17%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAA--MTEIDVLELLKRYDRSGSRC 158
           IG+G+FG+VL    +  G   A+KV+  ++I K +E    M E +VL  LK         
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVL--LKNLKHP--FL 58

Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           V +   F     +  V + + G  L+  L++   R F     R    ++   + ++H L 
Sbjct: 59  VGLHYSFQTAEKLYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLN 116

Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +I+ DLKPENIL  S  ++ + D+ +                   ++  +  ST      
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDFGLC---------------KEGVEPEETTST------ 155

Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF------QTHENLEH 329
                 T  Y APEV+    +    D W +G +L E+  G   F      Q ++N+ H
Sbjct: 156 ---FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH 210

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 39/226 (17%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYDRSGSRC 158
           +G+G+FG+V+    + T E  AIK+++     +    E  M E  VL L  +        
Sbjct: 8   LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDK----PPFL 63

Query: 159 VQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYR-PFPVDLVREIGRQLLECVAFMHD 215
            Q+ + F   + +  V E +  G  +Y   +   ++ P  V    EI   L     F+H 
Sbjct: 64  TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLF----FLHR 119

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             +I+ DLK +N++  S  ++KI D+ +      D                  G T    
Sbjct: 120 RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD------------------GVTT--- 158

Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
                   T  Y APE+I    +    D W+ G +L E+ +G+  F
Sbjct: 159 ---RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 201

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 42/230 (18%)

Query: 99  ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRC 158
           +L ++G+G +G V   L R TG T+A+K +R   +  E+   +I ++EL   +       
Sbjct: 5   VLDELGKGNYGSVYKVLHRPTGVTMAMKEIRL--ELDESKFNQI-IMELDILHKAVSPYI 61

Query: 159 VQIRNWFDYRNHICIVFE-MLGPS---LYDFLRKNNYRPFPVDLVREIGRQLLECVAFM- 213
           V     F     + +  E M   S   LY         P  V  +R I   +++ + F+ 
Sbjct: 62  VDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDV--LRRITYAVVKGLKFLK 119

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
            +  +IH D+KP N+L      +K+ D+ V+       N    L K++            
Sbjct: 120 EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSG------NLVASLAKTN------------ 161

Query: 274 EHQEHNYIVSTRHYRAPEVILGLG------WSYPCDMWSVGCILIELCSG 317
                   +  + Y APE I   G      ++   D+WS+G  ++E+  G
Sbjct: 162 --------IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALG 203

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 54/235 (22%), Positives = 91/235 (38%), Gaps = 45/235 (19%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYD 152
           +  L  +G+G+FG+V+    + T E  AIK+++     +    E  M E  VL L  +  
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK-- 59

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYR-PFPVDLVREIGRQLLEC 209
                  Q+ + F   + +  V E +  G  +Y   +   ++ P  V    EI   L   
Sbjct: 60  --PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLF-- 115

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
             F+H   +I+ DLK +N++                           L     IK+ DFG
Sbjct: 116 --FLHSKGIIYRDLKLDNVM---------------------------LDAEGHIKIADFG 146

Query: 270 ---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
                 +  +       T  Y APE+I    +    D W+ G +L E+ +G+  F
Sbjct: 147 MCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPF 201

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 47/221 (21%), Positives = 80/221 (36%), Gaps = 41/221 (18%)

Query: 106 GTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF 165
           G   +VL  +D  T +T  +K +R   +Y    +T I                V +  + 
Sbjct: 4   GVIDKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIP---------HCVPNMVCLHKYI 54

Query: 166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLK 224
              + + +V +   G  L+  + K  +   P + V+    +++  +  +H   ++  DL 
Sbjct: 55  VSEDSVFLVLQHAEGGKLWSHISK--FLNIPEECVKRWAAEMVVALDALHREGIVCRDLN 112

Query: 225 PENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS-TAYEHQEHNYIVS 283
           P NIL                           L     I++  F   +  E       V 
Sbjct: 113 PNNIL---------------------------LDDRGHIQLTYFSRWSEVEDSCDGEAVE 145

Query: 284 TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
              Y APEV      +  CD WS+G IL EL +G+ L + H
Sbjct: 146 -NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECH 185

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 45.0 bits (106), Expect = 4e-05
 Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 36/224 (16%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K ++ +G G FG V   +    GE V I V  +IK  RE    + +   L + Y  +G  
Sbjct: 10  KKVKVLGSGAFGTVYKGIWIPDGENVKIPV--AIKVLRENTSPKANKEILDEAYVMAGVG 67

Query: 158 CVQIRNWFDYRNHICI-----VFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
              +         IC+     +   L P   L D++R+N  R    DL+     Q+ + +
Sbjct: 68  SPYVCRLLG----ICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWC-VQIAKGM 122

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
           +++ ++RL+H DL   N+L  SP ++KI D+ +                    +++D   
Sbjct: 123 SYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLA-------------------RLLDIDE 163

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
           T Y        +    + A E IL   +++  D+WS G  + EL
Sbjct: 164 TEYHADGGKVPIK---WMALESILHRRFTHQSDVWSYGVTVWEL 204

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 70/261 (26%), Positives = 98/261 (37%), Gaps = 58/261 (22%)

Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRS-------IKKYREAAMTEIDVLELLKRYDR 153
            KIG+G FG V   + +   E VA+K  RS        K  +EA        E+LK+YD 
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTE-VAVKTCRSTLPPDLKRKFLQEA--------EILKQYDH 51

Query: 154 SG-----SRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
                    CVQ       +  I IV E + G SL  FLRK   R   V  + ++     
Sbjct: 52  PNIVKLIGVCVQ-------KQPIYIVMELVPGGSLLTFLRKKKNR-LTVKKLLQMSLDAA 103

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++     IH DL   N L      LKI D+ ++ R      Y      S  +K I 
Sbjct: 104 AGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMS-REEEGGIY----TVSDGLKQIP 158

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHEN 326
              T                 APE +    ++   D+WS G +L E  S G+  +    N
Sbjct: 159 IKWT-----------------APEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN 201

Query: 327 LEHLAMMERVLG---PIPQHM 344
            +    +E   G   P PQ  
Sbjct: 202 QQTRERIES--GYRMPAPQLC 220

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 59/266 (22%)

Query: 102 KIGEGTFGQVLDCLDRETGET--VAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSR 157
           ++G G FG V   + +   +   VAIKV+++   K  R+  M E +++            
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMH----------- 50

Query: 158 CVQIRNWFDYR-------NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             Q+ N +  R         + +V EM  G  L  FL         V  V E+  Q+   
Sbjct: 51  --QLDNPYIVRMIGVCEAEALMLVMEMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMG 107

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDF 268
           + ++     +H DL   N+L V+  Y KI D+ ++     D +YYK R      +K    
Sbjct: 108 MKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLK---- 163

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL 327
                             + APE I    +S   D+WS G  + E  S G+  ++  +  
Sbjct: 164 ------------------WYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP 205

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAE 353
           E ++ +E+          KR+D PAE
Sbjct: 206 EVMSFIEQG---------KRLDCPAE 222

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 31/199 (15%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGET----VAIKVVR------SIKKY-REAA-MTEI 142
           +  + ++ +G G FG V   +    GE     VAIKV+R      + K+   EA  M  +
Sbjct: 7   TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV 66

Query: 143 DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI 202
           D   +++      S  VQ+         I  +   LG  L D++R +        L+   
Sbjct: 67  DHPHVVRLLGICLSSQVQL---------ITQLMP-LG-CLLDYVRNHKDNIGSQYLL-NW 114

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK----RLP 258
             Q+ + ++++ + RL+H DL   N+L  +P+++KI D+ +      D   Y     ++P
Sbjct: 115 CVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVP 174

Query: 259 -KSSAIKVIDFGSTAYEHQ 276
            K  A++ I      Y H+
Sbjct: 175 IKWMALESILHR--IYTHK 191

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 43.4 bits (102), Expect = 1e-04
 Identities = 66/261 (25%), Positives = 112/261 (42%), Gaps = 51/261 (19%)

Query: 98  KILRKIGEGTFGQVLDC-LDRE---TGETVAIKVVRSIKKYREAA--MTEIDVLELLKRY 151
           K +R +GEG FG+V  C  D E   TGE VA+K ++        A    EI++L  L   
Sbjct: 7   KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 66

Query: 152 D--RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI--GRQL 206
           +  +    C +     D  N I ++ E L   SL ++L +N  +   ++L +++    Q+
Sbjct: 67  NIVKYKGICTE-----DGGNGIKLIMEFLPSGSLKEYLPRNKNK---INLKQQLKYAVQI 118

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
            + + ++   + +H DL   N+L  S   +KI D+ +T    TD  YY        +K  
Sbjct: 119 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY-------TVK-D 170

Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL---CSGEALFQT 323
           D  S  +             + APE ++   +    D+WS G  L EL   C  E+    
Sbjct: 171 DLDSPVF-------------WYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSES---- 213

Query: 324 HENLEHLAMMERVLGPIPQHM 344
                 + +  +++GP    M
Sbjct: 214 ----SPMTLFLKMIGPTHGQM 230

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 43.4 bits (102), Expect = 1e-04
 Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 68/247 (27%)

Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVRSIKKYREAA--MTEIDVLELLKRY 151
           + +GEG FGQV+      +D+   +   TVA+K+++     ++ A  ++E+++++L+ ++
Sbjct: 18  KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKH 77

Query: 152 DRSGSR---CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
               +    C Q     +   ++ + +   G +L +FLR    RP   D   +I +    
Sbjct: 78  KNIINLLGVCTQ-----EGPLYVIVEYAAKG-NLREFLRAR--RPPGPDYTFDITKVPEE 129

Query: 205 -----QLLECV-------AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
                 L+ C         ++   R IH DL   N+L      +KI D+ + AR   D++
Sbjct: 130 QLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGL-ARGVHDID 188

Query: 253 YYK-----RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSV 307
           YYK     RLP                            + APE +    +++  D+WS 
Sbjct: 189 YYKKTSNGRLPVK--------------------------WMAPEALFDRVYTHQSDVWSF 222

Query: 308 GCILIEL 314
           G ++ E+
Sbjct: 223 GILMWEI 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 49/244 (20%), Positives = 93/244 (38%), Gaps = 61/244 (25%)

Query: 98  KILRKIGEGTFGQV-----LDCLDRETGETVAIKVV-------RSIKKYREAA-MTEID- 143
            ++R++G+G+FG V        +  E    VAIK V         I+   EA+ M E + 
Sbjct: 9   TLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNC 68

Query: 144 --VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRK--------NNYR 192
             V+ LL                        +V E++    L  +LR             
Sbjct: 69  HHVVRLLGVVSTG--------------QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLG 114

Query: 193 PFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
           P  +    ++  ++ + +A++   + +H DL   N +      +KI D+ +T R   + +
Sbjct: 115 PPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMT-RDIYETD 173

Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
           YY++  K                     ++  R + APE +    ++   D+WS G +L 
Sbjct: 174 YYRKGGKG--------------------LLPVR-WMAPESLKDGVFTTKSDVWSFGVVLW 212

Query: 313 ELCS 316
           E+ +
Sbjct: 213 EMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 50/215 (23%), Positives = 80/215 (37%), Gaps = 35/215 (16%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIR 162
           IG+G FG V+    R  G+ VA+K ++      +A + E  V+  L+         VQ+ 
Sbjct: 14  IGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRH-----PNLVQLL 66

Query: 163 NWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHT 221
                 N + IV E M   SL D+LR        +         + E + ++ +   +H 
Sbjct: 67  GVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHR 126

Query: 222 DLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI 281
           DL   N+L                           + +    KV DFG      Q  +  
Sbjct: 127 DLAARNVL---------------------------VSEDLVAKVSDFGLAKEASQGQDSG 159

Query: 282 VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                + APE +    +S   D+WS G +L E+ S
Sbjct: 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 81/341 (23%), Positives = 126/341 (36%), Gaps = 97/341 (28%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKRYD 152
           K+L K G G   QV      +TG+  A+KV++     R    T     E ++LE +K   
Sbjct: 2   KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKH-- 59

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 V +   F     + ++ E L G  L+  L +     F  D       ++   + 
Sbjct: 60  ---PFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGI--FMEDTACFYLSEISLALE 114

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-- 269
            +H   +I+ DLKPENIL                           L     +K+ DFG  
Sbjct: 115 HLHQQGIIYRDLKPENIL---------------------------LDAQGHVKLTDFGLC 147

Query: 270 -STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
             + +E    +    T  Y APE+++  G     D WS+G ++ ++ +G   F T EN +
Sbjct: 148 KESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPF-TAENRK 206

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
                            K +DK     + +G+L+ P               P L      
Sbjct: 207 -----------------KTIDK-----ILKGKLNLP---------------PYLTPEAR- 228

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
                     DLL+ LL+ +PSSRL      A +   HPFF
Sbjct: 229 ----------DLLKKLLKRNPSSRLGAGPGDAAEVQSHPFF 259

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 43.3 bits (102), Expect = 3e-04
 Identities = 53/249 (21%), Positives = 93/249 (37%), Gaps = 68/249 (27%)

Query: 118 ETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC----- 172
            TG  VAIK++R+     E             R+ R  + C ++     Y  +I      
Sbjct: 1   MTGHEVAIKLLRTDAPEEE---------HQRARFRRETALCARL-----YHPNIVALLDS 46

Query: 173 ---------IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTD 222
                     VFE + G +L + L  +   P   +  R +  Q+L+ +A  H+  ++H D
Sbjct: 47  GEAPPGLLFAVFEYVPGRTLREVLAADGALP-AGETGR-LMLQVLDALACAHNQGIVHRD 104

Query: 223 LKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY-- 280
           LKP+NI+             V+                   KV+DFG         +   
Sbjct: 105 LKPQNIM-------------VSQTGVR-----------PHAKVLDFGIGTLLPGVRDADV 140

Query: 281 --------IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                   ++ T  Y APE + G   +   D+++ G I +E  +G+ + Q     E   +
Sbjct: 141 ATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQRVVQGASVAE---I 197

Query: 333 MERVLGPIP 341
           + + L P+ 
Sbjct: 198 LYQQLSPVD 206

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 61/235 (25%), Positives = 94/235 (40%), Gaps = 52/235 (22%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 7   TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 64

Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRK-NNYRPFP--VDLVRE----IGRQLL 207
                          H+C    +LG  L   ++      PF   +D VRE    IG Q L
Sbjct: 65  SVD----------NPHVC---RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL 111

Query: 208 --ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
              CV       ++ + RL+H DL   N+L  +P+++KI D+ +      D   Y     
Sbjct: 112 LNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGG 171

Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
              IK                      + A E IL   +++  D+WS G  + EL
Sbjct: 172 KVPIK----------------------WMALESILHRIYTHQSDVWSYGVTVWEL 204

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 41.4 bits (97), Expect = 5e-04
 Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 39/246 (15%)

Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYDRSGSRC 158
           +G+G+FG+V+    + T E  AIKV++     +    +  MTE  +L L  ++       
Sbjct: 3   LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKH----PFL 58

Query: 159 VQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             +   F  ++ +  V E +  G  ++   R    R F     R    ++   + F+H  
Sbjct: 59  TALHCCFQTKDRLFFVMEYVNGGDLMFQIQRS---RKFDEPRSRFYAAEVTLALMFLHRH 115

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
            +I+ DLK +NIL  +  + K+ D+ +                      I  G T     
Sbjct: 116 GVIYRDLKLDNILLDAEGHCKLADFGMCKEG------------------ILNGVTT---- 153

Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT--HENLEHLAMME 334
                  T  Y APE++  L +    D W++G ++ E+ +G+  F+    ++L    + +
Sbjct: 154 --TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD 211

Query: 335 RVLGPI 340
            VL P+
Sbjct: 212 DVLYPV 217

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 41.5 bits (97), Expect = 5e-04
 Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 57/242 (23%)

Query: 103 IGEGTFGQVLDCLDRETG-----ETVAIKVVR---SIKKYREAAMTEIDVLE-------- 146
           +GEG FG+V+              TVA+K+++   S  + R   ++E ++L+        
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELR-DLLSEFNLLKQVNHPHVI 66

Query: 147 -------------LLKRYDRSGSRCVQIRNWFDYRNHI-CIVFEMLGPSLYDFLRKNNYR 192
                        L+  Y + GS    +R++      +        G     +L   + R
Sbjct: 67  KLYGACSQDGPLLLIVEYAKYGS----LRSFLRESRKVGPSYLGSDGNRNSSYLDNPDER 122

Query: 193 PFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
              +  +     Q+   + ++ +++L+H DL   N+L      +KI D+ ++     + +
Sbjct: 123 ALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS 182

Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
           Y KR      +K                      + A E +    ++   D+WS G +L 
Sbjct: 183 YVKRSKGRIPVK----------------------WMAIESLFDHIYTTQSDVWSFGVLLW 220

Query: 313 EL 314
           E+
Sbjct: 221 EI 222

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 41.3 bits (97), Expect = 6e-04
 Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 27/183 (14%)

Query: 101 RKIGEGTFGQVLDCL-DRETGETVAIKVVRSIKKYREAAMTEIDVLE--LLKRYDRSG-- 155
           R IGEG FG V   +      E +A+  V++ K     ++ E  + E  +++++D     
Sbjct: 12  RCIGEGQFGDVYQGVYMSPENEKIAV-AVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIV 70

Query: 156 ---SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                  +   W        IV E+  LG  L  +L+ N Y      L+     QL   +
Sbjct: 71  KLIGVITENPVW--------IVMELAPLG-ELRSYLQVNKYSLDLASLILYS-YQLSTAL 120

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK----RLP-KSSAIKV 265
           A++   R +H D+   N+L  SP+ +K+ D+ ++ R   D +YYK    +LP K  A + 
Sbjct: 121 AYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLS-RYLEDESYYKASKGKLPIKWMAPES 179

Query: 266 IDF 268
           I+F
Sbjct: 180 INF 182

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 41.4 bits (97), Expect = 8e-04
 Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 19/160 (11%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYD 152
           + I++ I  G FG+V     +   +  A+KVV+      K        E D L L K   
Sbjct: 6   FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK--- 62

Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNY--RPFPVDLVREIGRQLLEC 209
                 V +       N++ +V E ++G  +   L    Y      V  + E+   L   
Sbjct: 63  --SPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALAL--- 117

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDY---KVTAR 246
             ++H   +IH DLKP+N+L  +  ++K+ D+   KVT  
Sbjct: 118 -DYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLN 156

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 50/247 (20%), Positives = 107/247 (43%), Gaps = 68/247 (27%)

Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVRSIKKYREAA--MTEIDVLELLKRY 151
           + +GEG FGQV+      +D++  +   TVA+K+++     ++ +  ++E+++++++ ++
Sbjct: 21  KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 80

Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
               +    C Q     D   ++ + +   G +L ++LR    RP  ++   +I R    
Sbjct: 81  KNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDIARVPDE 132

Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
                       Q+   + ++   + IH DL   N+L      +KI D+ + AR   +++
Sbjct: 133 QMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDVNNID 191

Query: 253 YYK-----RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSV 307
           YYK     RLP                            + APE +    +++  D+WS 
Sbjct: 192 YYKKTTNGRLPVK--------------------------WMAPEALFDRVYTHQSDVWSF 225

Query: 308 GCILIEL 314
           G ++ E+
Sbjct: 226 GVLMWEI 232

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 25/125 (20%)

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H  +++H DLK  NI  +    +K+ D+  + +    V+             +D  S+ 
Sbjct: 185 VHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS-------------LDVASS- 230

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                      T +Y APE+     +S   DMWS+G IL EL +    F+     E   +
Sbjct: 231 --------FCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---I 279

Query: 333 MERVL 337
           M++VL
Sbjct: 280 MQQVL 284

Length = 478

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 41/223 (18%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K+L+ IG+G FG V+  L    G  VA+K +++     +A + E  V+  L+      S 
Sbjct: 9   KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRH-----SN 60

Query: 158 CVQIRNWF-DYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
            VQ+     + +  + IV E M   SL D+LR         D + +    + E + ++  
Sbjct: 61  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA 120

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVT--ARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
              +H DL   N+L       K+ D+ +T  A S  D     +LP    +K         
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG---KLP----VK--------- 164

Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                        + APE +    +S   D+WS G +L E+ S
Sbjct: 165 -------------WTAPEALREKKFSTKSDVWSFGILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 65/267 (24%), Positives = 103/267 (38%), Gaps = 60/267 (22%)

Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
            IGEG FG VL      TG+ VA+K ++      +A + E  V+  L   +      V +
Sbjct: 13  IIGEGEFGAVLQ--GEYTGQKVAVKNIKC-DVTAQAFLEETAVMTKLHHKNLVRLLGVIL 69

Query: 162 RNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
            N       + IV E++   +L +FLR        V  + +    + E + ++   +L+H
Sbjct: 70  HN------GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVH 123

Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   NIL       K+ D+ +       V+   +LP    +K                
Sbjct: 124 RDLAARNILVSEDGVAKVSDFGLARVGSMGVD-NSKLP----VK---------------- 162

Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGP 339
                 + APE +    +S   D+WS G +L E+ S G A                   P
Sbjct: 163 ------WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRA-------------------P 197

Query: 340 IPQHMLKRVDKPAEKFVRRGRLDWPEG 366
            P+  LK V +  EK     R++ PEG
Sbjct: 198 YPKMSLKEVKECVEKGY---RMEPPEG 221

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 50/232 (21%)

Query: 101 RKIGEGTFGQVLDC----LDRETGE-TVAIKVVRSIKKY--REAAMTEIDVLELLKRYDR 153
           + +G G FG+V++     L +      VA+K+++       REA M+E+ ++  L  ++ 
Sbjct: 41  KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHE- 99

Query: 154 SGSRCVQIRNWFDYRNH---ICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  I N          I ++ E    G  L +FLR+       ++ +     Q+ +
Sbjct: 100 ------NIVNLLGACTIGGPILVITEYCCYG-DLLNFLRRKRESFLTLEDLLSFSYQVAK 152

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY----KRLPKSSAIK 264
            +AF+     IH DL   N+L    + +KI D+ +      D NY      RLP    +K
Sbjct: 153 GMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLP----VK 208

Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                                 + APE I    +++  D+WS G +L E+ S
Sbjct: 209 ----------------------WMAPESIFNCVYTFESDVWSYGILLWEIFS 238

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 37/229 (16%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRYD 152
            I + IG G FG+V     +  G+    VAIK ++  S  K R   +TE  ++    ++D
Sbjct: 7   TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMG---QFD 63

Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 +++         + I+ E M   SL  FLR+N+ +     LV  + R +   + 
Sbjct: 64  HP--NIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVG-MLRGIASGMK 120

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR-SPTDVNYYKRLPKSSAIKVIDFGS 270
           ++ ++  +H DL   NIL  S    K+ D+ ++ R   ++  Y  +  K           
Sbjct: 121 YLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPI-------- 172

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GE 318
                           + APE I    ++   D+WS G ++ E+ S GE
Sbjct: 173 ---------------RWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGE 206

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 39.1 bits (91), Expect = 0.003
 Identities = 57/249 (22%), Positives = 99/249 (39%), Gaps = 36/249 (14%)

Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 13  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 67

Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 68  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 127

Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ + +R  T   Y         IK                
Sbjct: 128 RDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIK---------------- 170

Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
                 + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 171 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRM 224

Query: 334 ERVLGPIPQ 342
           ER  G  P+
Sbjct: 225 ERPEGCPPK 233

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 39.3 bits (91), Expect = 0.003
 Identities = 16/58 (27%), Positives = 34/58 (58%)

Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY 253
           +++++ + RQ+L  +  +H + ++H D+KPEN+L      +KI D+       T +N+
Sbjct: 308 INVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF 365

Length = 507

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	432
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG1167	418	consensus Serine/threonine protein kinase of the C	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG0576	829	consensus Mitogen-activated protein kinase kinase	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	100.0
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.97
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.97
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.97
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.96
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.96
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.95
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.95
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.94
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.94
PRK09188	365	serine/threonine protein kinase; Provisional	99.93
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.93
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.93
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.92
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.91
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.91
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.9
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.89
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.88
PRK10345	210	hypothetical protein; Provisional	99.87
PRK12274	218	serine/threonine protein kinase; Provisional	99.87
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.86
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.86
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.83
smart00090	237	RIO RIO-like kinase.	99.83
PRK14879	211	serine/threonine protein kinase; Provisional	99.79
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.76
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.76
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.75
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.74
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.73
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.71
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.7
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.68
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.67
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.64
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.58
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.52
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.5
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.48
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.42
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.42
KOG1243	690	consensus Protein kinase [General function predict	99.41
KOG3087	229	consensus Serine/threonine protein kinase [General	99.34
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.24
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.16
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.14
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.14
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.07
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.06
PRK09902	216	hypothetical protein; Provisional	98.93
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.83
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.8
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.71
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.68
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.67
COG4248	637	Uncharacterized protein with protein kinase and he	98.65
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.52
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.44
PF01636	239	APH: Phosphotransferase enzyme family This family	98.39
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.39
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.32
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.18
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.16
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.11
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.1
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.02
PLN02876	822	acyl-CoA dehydrogenase	97.92
KOG2270	520	consensus Serine/threonine protein kinase involved	97.88
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.68
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.64
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.54
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.48
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.47
PRK05231	319	homoserine kinase; Provisional	97.43
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.36
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.36
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	97.27
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.25
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.12
PLN02236	344	choline kinase	97.01
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.94
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.93
PRK10593	297	hypothetical protein; Provisional	96.81
PRK12396	409	5-methylribose kinase; Reviewed	96.74
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.53
PRK11768	325	serine/threonine protein kinase; Provisional	96.53
PLN02756	418	S-methyl-5-thioribose kinase	96.47
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.12
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	96.1
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	96.09
PTZ00384	383	choline kinase; Provisional	95.89
KOG1236	565	consensus Predicted unusual protein kinase [Genera	95.81
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	95.51
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.44
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	95.39
PHA03111	444	Ser/Thr kinase; Provisional	95.23
PRK06148	1013	hypothetical protein; Provisional	95.0
KOG2269	531	consensus Serine/threonine protein kinase [Signal	94.72
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	94.43

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-66  Score=465.76  Aligned_cols=351  Identities=58%  Similarity=1.015  Sum_probs=314.8

Q ss_pred             hcccCCCCCCCCCCCCCCceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHH
Q 047395           67 GLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLE  146 (432)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~  146 (432)
                      +.+....+.+..++++|++.+..|+.+.+||+++..||+|.||.|-.+.+..++..||||+++...+..++.+-|+++|+
T Consensus        61 ~~~~~~~~~~~~dD~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLq  140 (415)
T KOG0671|consen   61 GRARLESRPGRPDDKDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQ  140 (415)
T ss_pred             ccccccCCCCCCCCCCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHH
Confidence            33556677888899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcC-CCCCceeEeecccccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCC
Q 047395          147 LLKRYD-RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKP  225 (432)
Q Consensus       147 ~l~~~~-~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  225 (432)
                      .+.+.+ ...-.|+++.+||+..++.|||+|.+|.|++++|..+...+++...++.+++||+++++|||+.+++|.||||
T Consensus       141 ki~~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKP  220 (415)
T KOG0671|consen  141 KINESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKP  220 (415)
T ss_pred             HHHhcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCCh
Confidence            998766 3445689999999999999999999999999999999989999999999999999999999999999999999


Q ss_pred             CcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHH
Q 047395          226 ENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMW  305 (432)
Q Consensus       226 ~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiw  305 (432)
                      +|||+.+..+.++...+-.       -...+......|+|+|||.|....+..+..+.|..|+|||++++-+++.++|||
T Consensus       221 ENILfvss~~~~~~~~k~~-------~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvW  293 (415)
T KOG0671|consen  221 ENILFVSSEYFKTYNPKKK-------VCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVW  293 (415)
T ss_pred             heEEEeccceEEEeccCCc-------cceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCce
Confidence            9999998887776554432       111235567789999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhh
Q 047395          306 SVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL  385 (432)
Q Consensus       306 SlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (432)
                      |+||||+||.||...|++.++.+++++|++++|++|..+..+..  .++++.++.++|++.....+ .+.+.+.+.....
T Consensus       294 SiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~--~~Kyf~~~rldw~e~~~~~~-~k~v~~~ckpl~~  370 (415)
T KOG0671|consen  294 SIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTR--KEKYFRRGRLDWPEVSSKGK-SKYVFEPCKPLKK  370 (415)
T ss_pred             eeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhh--hHhhhhcccccCcccccccc-chhhhcCCccHHH
Confidence            99999999999999999999999999999999999999888765  67888888999999888776 5555566666666


Q ss_pred             hhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       386 ~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .....+....++.|||++||.+||.+|+|+.|+|.||||+..
T Consensus       371 ~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  371 YMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL  412 (415)
T ss_pred             HhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence            666667777789999999999999999999999999999864

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=3.9e-60  Score=455.18  Aligned_cols=327  Identities=39%  Similarity=0.711  Sum_probs=276.2

Q ss_pred             CCCCCCCceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhc-CCCCC
Q 047395           78 NDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY-DRSGS  156 (432)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~-~~~~~  156 (432)
                      .++.++.|.+..++.+..+|.|++.||+|+||.|.+|++..|++.||||++++......+...|+.+|..|+.. ....-
T Consensus       169 ~~~~~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~  248 (586)
T KOG0667|consen  169 FDDEDGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKY  248 (586)
T ss_pred             CCCCCCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCe
Confidence            45567789999999999999999999999999999999999999999999999888888899999999999943 34457


Q ss_pred             ceeEeecccccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcc
Q 047395          157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYL  236 (432)
Q Consensus       157 ~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  236 (432)
                      |||+++++|...+|+|||+|++..+|+++|+.+...+++...++.++.||+.||.+||+.||||+||||+|||+.+.   
T Consensus       249 n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~---  325 (586)
T KOG0667|consen  249 NIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDP---  325 (586)
T ss_pred             eEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccC---
Confidence            99999999999999999999999999999999998899999999999999999999999999999999999998753   


Q ss_pred             ccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh
Q 047395          237 KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       237 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt  316 (432)
                                            ....|||+|||.|+.......+.+.+..|+|||++.|.+|+.+.||||||||+.||++
T Consensus       326 ----------------------~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~t  383 (586)
T KOG0667|consen  326 ----------------------KRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFT  383 (586)
T ss_pred             ----------------------CcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhc
Confidence                                  3458999999999998888778899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhc-cCCcCCCCCCCC-----HHHHHH-------hhcCc-hh
Q 047395          317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR-RGRLDWPEGATS-----RESIKA-------VLKLP-RL  382 (432)
Q Consensus       317 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~-------~~~~~-~~  382 (432)
                      |.+.|.+.++.++++.|.+++|.+|..++....+....+.. .+..........     ......       ....+ ..
T Consensus       384 G~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~  463 (586)
T KOG0667|consen  384 GEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGS  463 (586)
T ss_pred             CccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCC
Confidence            99999999999999999999999999999998887555554 232211111110     000001       01111 22


Q ss_pred             hhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       383 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ..+...........+.|||.+||.+||.+|+|+.|+|+||||++.-.
T Consensus       464 ~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~~  510 (586)
T KOG0667|consen  464 RSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTSL  510 (586)
T ss_pred             cccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccccc
Confidence            22222222344566899999999999999999999999999996443

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.6e-60  Score=432.31  Aligned_cols=260  Identities=29%  Similarity=0.492  Sum_probs=220.2

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh--------hhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--------YREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      .+.+.|.+.+.||+|+||.|-+|..+.||+.||||++++...        ......+|+++|+.|.|     ||||++++
T Consensus       169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~H-----P~IV~~~d  243 (475)
T KOG0615|consen  169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSH-----PNIVRIKD  243 (475)
T ss_pred             hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCC-----CCEEEEee
Confidence            356789999999999999999999999999999999974321        22345799999999998     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      +|+..+..|+||||+ ||+|.+++-.++  .+.+...+.+++||+.||.|||++||+||||||+|||+..+         
T Consensus       244 ~f~~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~---------  312 (475)
T KOG0615|consen  244 FFEVPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND---------  312 (475)
T ss_pred             eeecCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC---------
Confidence            999999999999999 999999999876  68999999999999999999999999999999999998652         


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCccccc--CCccccccCCCcchhHHHhCCC---CCccchHHHHHHHHHHHHhC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH--QEHNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~---~~~~sDiwSlGvil~elltg  317 (432)
                                     ..+..+||+|||+|+..+  ....+.|||+.|.|||++.+..   +..++|||||||+||-+++|
T Consensus       313 ---------------~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG  377 (475)
T KOG0615|consen  313 ---------------AEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSG  377 (475)
T ss_pred             ---------------CcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEecc
Confidence                           355789999999999875  4457789999999999998765   33588999999999999999


Q ss_pred             CCCCCCCCcHH-HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          318 EALFQTHENLE-HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       318 ~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      .+||.+..... ...+|.+....+-                                             +..+..++++
T Consensus       378 ~pPFS~~~~~~sl~eQI~~G~y~f~---------------------------------------------p~~w~~Isee  412 (475)
T KOG0615|consen  378 YPPFSEEYTDPSLKEQILKGRYAFG---------------------------------------------PLQWDRISEE  412 (475)
T ss_pred             CCCcccccCCccHHHHHhcCccccc---------------------------------------------ChhhhhhhHH
Confidence            99998755433 4444433222111                                             1233467788


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .++||.+||..||++|||++|+|+||||+..
T Consensus       413 a~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~  443 (475)
T KOG0615|consen  413 ALDLINWMLVVDPENRPSADEALNHPWFKDA  443 (475)
T ss_pred             HHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence            9999999999999999999999999999854

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.3e-58  Score=438.22  Aligned_cols=253  Identities=33%  Similarity=0.559  Sum_probs=228.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeec----hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .+|+..+.||+|||++||.+++..+|+.||+|++.+    ....++...+||++.+.|+|     ||||+++++|++.++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~H-----pnIV~f~~~FEDs~n   92 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKH-----PNIVQFYHFFEDSNN   92 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCC-----CcEEeeeeEeecCCc
Confidence            579999999999999999999999999999999975    45667889999999999998     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|||+|+| .++|..++++.+  +++|.+++.+++||+.||.|||+++|+|||||..|+|                    
T Consensus        93 VYivLELC~~~sL~el~Krrk--~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlf--------------------  150 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKRRK--PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLF--------------------  150 (592)
T ss_pred             eEEEEEecCCccHHHHHHhcC--CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhhee--------------------
Confidence            99999999 999999998654  8999999999999999999999999999999999999                    


Q ss_pred             CccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                             ++.+.++||+|||+|....   +...+.||||.|.|||++....++..+||||+|||||.||+|++||+..+-
T Consensus       151 -------L~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v  223 (592)
T KOG0575|consen  151 -------LNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV  223 (592)
T ss_pred             -------ecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH
Confidence                   5566789999999988765   456778999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+.+..|...-..+|.                                                 .++.++.+||.+||+
T Consensus       224 kety~~Ik~~~Y~~P~-------------------------------------------------~ls~~A~dLI~~lL~  254 (592)
T KOG0575|consen  224 KETYNKIKLNEYSMPS-------------------------------------------------HLSAEAKDLIRKLLR  254 (592)
T ss_pred             HHHHHHHHhcCccccc-------------------------------------------------ccCHHHHHHHHHHhc
Confidence            8888777665444442                                                 456678999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCccC
Q 047395          407 YDPSSRLTAHDALKHPFFTRDYYR  430 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~~~~  430 (432)
                      .||.+|||+++||.|+||++.+..
T Consensus       255 ~~P~~Rpsl~~vL~h~Ff~~g~~p  278 (592)
T KOG0575|consen  255 PNPSERPSLDEVLDHPFFKSGFTP  278 (592)
T ss_pred             CCcccCCCHHHHhcCHhhhCCCcC
Confidence            999999999999999999776653

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.3e-57  Score=398.01  Aligned_cols=279  Identities=32%  Similarity=0.589  Sum_probs=234.5

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|+.+.++|+|+||+||+|+++.||+.||||++...   ....+-.++|+++|++|+|     +|+|.++++|.....+
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH-----~NLVnLiEVFrrkrkl   76 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKH-----ENLVNLIEVFRRKRKL   76 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhccc-----chHHHHHHHHHhccee
Confidence            4689999999999999999999999999999999643   3456678999999999999     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||+|||..++.+-|.... ..++.+.++.+++|++.|+.|+|++++|||||||+||||                     
T Consensus        77 hLVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi---------------------  134 (396)
T KOG0593|consen   77 HLVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI---------------------  134 (396)
T ss_pred             EEEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE---------------------
Confidence            9999999999988888776 469999999999999999999999999999999999995                     


Q ss_pred             cccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                            ..++.+||||||+|+....   ..+..+.|.+|+|||++.+ ..|+.++||||+||++.||++|.+.|.+.++.
T Consensus       135 ------t~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi  208 (396)
T KOG0593|consen  135 ------TQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI  208 (396)
T ss_pred             ------ecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH
Confidence                  4567889999998887553   3355789999999999998 57999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +++..|...+|.+++..........  ++....++-|+....                .....+.++..+.||+++||..
T Consensus       209 DQLy~I~ktLG~L~prhq~iF~~N~--~F~Gv~lP~~~~~ep----------------Le~k~p~~s~~~ld~~k~cL~~  270 (396)
T KOG0593|consen  209 DQLYLIRKTLGNLIPRHQSIFSSNP--FFHGVRLPEPEHPEP----------------LERKYPKISNVLLDLLKKCLKM  270 (396)
T ss_pred             HHHHHHHHHHcccCHHHHHHhccCC--ceeeeecCCCCCccc----------------hhhhcccchHHHHHHHHHHhcC
Confidence            9999999999998876554432221  111111222211111                1122345666789999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 047395          408 DPSSRLTAHDALKHPFF  424 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f  424 (432)
                      ||++|++.+|+|.||||
T Consensus       271 dP~~R~sc~qll~H~yF  287 (396)
T KOG0593|consen  271 DPDDRLSCEQLLHHPYF  287 (396)
T ss_pred             CccccccHHHHhcChHH
Confidence            99999999999999999

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-57  Score=405.97  Aligned_cols=257  Identities=27%  Similarity=0.438  Sum_probs=217.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEee--chhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC-e
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN-H  170 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~-~  170 (432)
                      .++.+.++.||+|..|+||+|+++.|++.+|+|++.  .....+.++.+|++++....+     |+||.+++.|..++ .
T Consensus        78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~s-----pyIV~~ygaF~~~~~~  152 (364)
T KOG0581|consen   78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQS-----PYIVGFYGAFYSNGEE  152 (364)
T ss_pred             HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCC-----CCeeeEeEEEEeCCce
Confidence            356888999999999999999999999999999994  455667889999999998876     99999999999888 5


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ++|+|||| +|+|.++++..+  .+++..+..++.+|++||.|||+ ++||||||||+||||+                 
T Consensus       153 isI~mEYMDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvN-----------------  213 (364)
T KOG0581|consen  153 ISICMEYMDGGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVN-----------------  213 (364)
T ss_pred             EEeehhhcCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeec-----------------
Confidence            99999999 999999998864  69999999999999999999995 9999999999999965                 


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC--C
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH--E  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~--~  325 (432)
                                .+++|||||||.++.... ...+++||..|||||.+.+..|+.++||||||++++|+++|++||...  .
T Consensus       214 ----------skGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~  283 (364)
T KOG0581|consen  214 ----------SKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP  283 (364)
T ss_pred             ----------cCCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC
Confidence                      456778888887765433 446789999999999999999999999999999999999999999874  1


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcc-cchHHHHHHHHHc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD-HSAGYLIDLLQGL  404 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~~  404 (432)
                      ....+..+..+.-.+|+.                                             .+. .+|+++++||..|
T Consensus       284 ~~~~~~Ll~~Iv~~ppP~---------------------------------------------lP~~~fS~ef~~FV~~C  318 (364)
T KOG0581|consen  284 YLDIFELLCAIVDEPPPR---------------------------------------------LPEGEFSPEFRSFVSCC  318 (364)
T ss_pred             CCCHHHHHHHHhcCCCCC---------------------------------------------CCcccCCHHHHHHHHHH
Confidence            223333333333222211                                             112 3788899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          405 LRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      |++||.+|+|++|+++|||+++...
T Consensus       319 L~Kdp~~R~s~~qLl~Hpfi~~~~~  343 (364)
T KOG0581|consen  319 LRKDPSERPSAKQLLQHPFIKKFED  343 (364)
T ss_pred             hcCCcccCCCHHHHhcCHHHhhccc
Confidence            9999999999999999999986543

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-56  Score=403.58  Aligned_cols=255  Identities=29%  Similarity=0.515  Sum_probs=221.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++++.||+|+||+|++++.+.+++.+|+|++++..    ........|..+|..++|     |+||.++-.|++..
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~h-----PFiv~l~ysFQt~~   98 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKH-----PFIVKLIYSFQTEE   98 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCC-----CcEeeeEEecccCC
Confidence            467999999999999999999999999999999997533    345677889999999887     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+|+||+ ||.|.-.|.+.+  .+++..++.++..|+.||.|||++|||||||||+|||+                  
T Consensus        99 kLylVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL------------------  158 (357)
T KOG0598|consen   99 KLYLVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL------------------  158 (357)
T ss_pred             eEEEEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee------------------
Confidence            999999999 999999999876  79999999999999999999999999999999999995                  


Q ss_pred             CCccccccCCCCCCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                               +.+++++|+|||+++..   +....++|||+.|||||++.+.+|+..+|+|||||++|||++|.+||.+.+
T Consensus       159 ---------d~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~  229 (357)
T KOG0598|consen  159 ---------DEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED  229 (357)
T ss_pred             ---------cCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc
Confidence                     45566777777777642   233455799999999999999999999999999999999999999999988


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .......|.......+                                                +..++.++++||+++|
T Consensus       230 ~~~~~~~I~~~k~~~~------------------------------------------------p~~ls~~ardll~~LL  261 (357)
T KOG0598|consen  230 VKKMYDKILKGKLPLP------------------------------------------------PGYLSEEARDLLKKLL  261 (357)
T ss_pred             HHHHHHHHhcCcCCCC------------------------------------------------CccCCHHHHHHHHHHh
Confidence            8777776655432111                                                1235677899999999


Q ss_pred             ccCCCCCC----CHHHHhcCCCCCCCccC
Q 047395          406 RYDPSSRL----TAHDALKHPFFTRDYYR  430 (432)
Q Consensus       406 ~~dP~~R~----ta~elL~hp~f~~~~~~  430 (432)
                      ..||++|.    ++.++-+||||....|+
T Consensus       262 ~rdp~~RLg~~~d~~~ik~HpfF~~inW~  290 (357)
T KOG0598|consen  262 KRDPRQRLGGPGDAEEIKRHPFFKGINWE  290 (357)
T ss_pred             ccCHHHhcCCCCChHHhhcCcccccCCHH
Confidence            99999996    69999999999998775

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-57  Score=415.16  Aligned_cols=285  Identities=33%  Similarity=0.531  Sum_probs=237.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhH--hHHHHHHHHHHHH-hcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE--AAMTEIDVLELLK-RYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~--~~~~E~~~l~~l~-~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.+||.++++||.|+||.||+|+...+|..||||.+++.-...+  .-++|+..|++|. |     +||+++.+++.+.
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~h-----pniikL~Evi~d~   81 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPH-----PNIIKLKEVIRDN   81 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCC-----CcchhhHHHhhcc
Confidence            356799999999999999999999999999999999875432222  3467999998887 5     9999999999887


Q ss_pred             C-eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 N-HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~-~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      + .+|+|||||..+|+++++.+ .+.|++..++.|+.||++||+|+|.+|+.|||+||+||||.                
T Consensus        82 ~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~----------------  144 (538)
T KOG0661|consen   82 DRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS----------------  144 (538)
T ss_pred             CceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec----------------
Confidence            7 99999999999999999988 47899999999999999999999999999999999999964                


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                 .+..+||+|||+|+....  ..+.++.|.+|+|||++... -|+.+.||||+|||++|+.+-++.|.|.
T Consensus       145 -----------~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~  213 (538)
T KOG0661|consen  145 -----------GNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGA  213 (538)
T ss_pred             -----------ccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCC
Confidence                       356788999999887544  45667999999999999865 4899999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      ++.+++..|..++|.+....+...    ......-...+|.-....           +    .......+.++.+||.+|
T Consensus       214 sE~Dqi~KIc~VLGtP~~~~~~eg----~~La~~mnf~~P~~~~~~-----------l----~~L~p~~s~~~~~li~~l  274 (538)
T KOG0661|consen  214 SEIDQIYKICEVLGTPDKDSWPEG----YNLASAMNFRFPQVKPSP-----------L----KDLLPNASSEAASLIERL  274 (538)
T ss_pred             cHHHHHHHHHHHhCCCccccchhH----HHHHHHhccCCCcCCCCC-----------h----HHhCcccCHHHHHHHHHH
Confidence            999999999999998876544432    222222333343322211           1    112234788899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCc
Q 047395          405 LRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      |.|||.+||||+|+|+||||+...
T Consensus       275 l~WDP~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  275 LAWDPDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             hcCCCccCccHHHHhcCccccccc
Confidence            999999999999999999998643

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=4e-55  Score=376.05  Aligned_cols=279  Identities=31%  Similarity=0.531  Sum_probs=232.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh---hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+|...++||+|.||.||+|++..+|+.||||.++..+.   ..-...+|++.|+.++|     +||+.++++|...+.+
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h-----~nIi~LiD~F~~~~~l   76 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKH-----PNIIELIDVFPHKSNL   76 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccC-----cchhhhhhhccCCCce
Confidence            578899999999999999999999999999999975432   24568899999999998     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      .||+||+..+|...++.+. ..++..+++.++.+++.||+|||++.|+||||||.|+||++                   
T Consensus        77 ~lVfEfm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~-------------------  136 (318)
T KOG0659|consen   77 SLVFEFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISS-------------------  136 (318)
T ss_pred             EEEEEeccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcC-------------------
Confidence            9999999999999998875 57999999999999999999999999999999999999655                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                              ++.+||+|||+|+......   ...+-|.+|+|||++.|. .|+..+||||.|||+.||+.|.+.|.+.++.
T Consensus       137 --------~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi  208 (318)
T KOG0659|consen  137 --------DGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI  208 (318)
T ss_pred             --------CCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH
Confidence                    5566667777666544332   234789999999999987 5999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +++..|.+.+|.+.+..|+.+..-.++..-                + ....+...+    .....+.++.||+.+||.+
T Consensus       209 dQL~~If~~LGTP~~~~WP~~~~lpdY~~~----------------~-~~P~~~~~~----lf~aas~d~ldLl~~m~~y  267 (318)
T KOG0659|consen  209 DQLSKIFRALGTPTPDQWPEMTSLPDYVKI----------------Q-QFPKPPLNN----LFPAASSDALDLLSKMLTY  267 (318)
T ss_pred             HHHHHHHHHcCCCCcccCccccccccHHHH----------------h-cCCCCcccc----ccccccHHHHHHHHhhhcc
Confidence            999999999998887655554433222111                0 011111111    2345677789999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||.+|+||.|+|+|+||++.
T Consensus       268 nP~~Rita~qaL~~~yf~~~  287 (318)
T KOG0659|consen  268 NPKKRITASQALKHPYFKSL  287 (318)
T ss_pred             CchhcccHHHHhcchhhhcC
Confidence            99999999999999999864

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-55  Score=380.21  Aligned_cols=254  Identities=27%  Similarity=0.455  Sum_probs=230.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++++.||.|+||+|.+++++.+|..+|+|++++..    +..+...+|..+|+.+.|     |+++++.+.+.+.+
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~-----PFlv~l~~t~~d~~  117 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSH-----PFLVKLYGTFKDNS  117 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccC-----ceeEEEEEeeccCC
Confidence            367999999999999999999999999999999997543    455778889999999988     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ ||.|..++++.+  ++++..++.++.||+.||+|||+++|++|||||+|||                   
T Consensus       118 ~lymvmeyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiL-------------------  176 (355)
T KOG0616|consen  118 NLYMVMEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLL-------------------  176 (355)
T ss_pred             eEEEEEeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHee-------------------
Confidence            999999999 999999999875  7999999999999999999999999999999999999                   


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              ++.++.+||+|||+|+......-+.||||.|+|||++...+|+.++|.|||||++|||+.|.+||...+...
T Consensus       177 --------lD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~  248 (355)
T KOG0616|consen  177 --------LDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ  248 (355)
T ss_pred             --------eccCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH
Confidence                    566778899999999988888888999999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .+..|....-.+|.                                                 ..+.+++|||.++|+.|
T Consensus       249 iY~KI~~~~v~fP~-------------------------------------------------~fs~~~kdLl~~LL~vD  279 (355)
T KOG0616|consen  249 IYEKILEGKVKFPS-------------------------------------------------YFSSDAKDLLKKLLQVD  279 (355)
T ss_pred             HHHHHHhCcccCCc-------------------------------------------------ccCHHHHHHHHHHHhhh
Confidence            88887665544442                                                 45667899999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCCccC
Q 047395          409 PSSRL-----TAHDALKHPFFTRDYYR  430 (432)
Q Consensus       409 P~~R~-----ta~elL~hp~f~~~~~~  430 (432)
                      -.+|.     ...+|.+||||+...|+
T Consensus       280 ~t~R~gnlknG~~dIk~H~wF~~v~W~  306 (355)
T KOG0616|consen  280 LTKRFGNLKNGVEDIKNHPWFKGVDWE  306 (355)
T ss_pred             hHhhhcCcCCCccccccCcccccccHH
Confidence            99995     57899999999987764

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-55  Score=408.22  Aligned_cols=271  Identities=24%  Similarity=0.385  Sum_probs=227.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ..+|.+++.||.|+|++|++|+++.+++.||||++.+.-.    ....+.+|-.+|.+|.+    ||.|++|+..|++..
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~----hPgivkLy~TFQD~~  147 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSG----HPGIVKLYFTFQDEE  147 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhC----CCCeEEEEEEeeccc
Confidence            4689999999999999999999999999999999875322    23456678888998863    599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+|+||+ +|+|.++|++.+  .|++..++.++.||+.||+|||++|||||||||+|||++.+++++|+|||-+....
T Consensus       148 sLYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~  225 (604)
T KOG0592|consen  148 SLYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILS  225 (604)
T ss_pred             ceEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence            999999999 999999999876  79999999999999999999999999999999999998877777777777665433


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                      .......           .+-...........++||..|.+||++.....++.+|||+||||||.|+.|.+||.+.++..
T Consensus       226 ~~~~~~~-----------~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl  294 (604)
T KOG0592|consen  226 PSQKSQE-----------NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL  294 (604)
T ss_pred             hhhcccc-----------CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH
Confidence            3211100           00000001112356899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .++.|..+...+|+                                                 ..++.++|||+++|..|
T Consensus       295 iFqkI~~l~y~fp~-------------------------------------------------~fp~~a~dLv~KLLv~d  325 (604)
T KOG0592|consen  295 IFQKIQALDYEFPE-------------------------------------------------GFPEDARDLIKKLLVRD  325 (604)
T ss_pred             HHHHHHHhcccCCC-------------------------------------------------CCCHHHHHHHHHHHccC
Confidence            99998887666653                                                 44566889999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCccC
Q 047395          409 PSSRLTAHDALKHPFFTRDYYR  430 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~~~  430 (432)
                      |.+|+|++||.+||||.+..|+
T Consensus       326 p~~Rlt~~qIk~HpFF~~Vdw~  347 (604)
T KOG0592|consen  326 PSDRLTSQQIKAHPFFEGVDWE  347 (604)
T ss_pred             ccccccHHHHhhCcccccCChh
Confidence            9999999999999999987764

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-54  Score=393.49  Aligned_cols=262  Identities=29%  Similarity=0.507  Sum_probs=224.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec---hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ..+|.+.++||.|+||+||+|+++.++..||||.+.+   ..+..+.+..|+.+|+.++|     +|||.++++++.++.
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H-----~nIV~l~d~~~~~~~   83 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKH-----PNIVRLLDCIEDDDF   83 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCC-----cceeeEEEEEecCCe
Confidence            4679999999999999999999999999999999864   34567788999999999998     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +||||||| ||+|.+||++.+  .+++..++.++.||+.||++||+++||||||||+|||+..+..              
T Consensus        84 i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~--------------  147 (429)
T KOG0595|consen   84 IYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTAR--------------  147 (429)
T ss_pred             EEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCC--------------
Confidence            99999999 999999999876  6999999999999999999999999999999999999876410              


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                             .+....+||+|||+|+.....  ..+.||++.|||||++....|+.|+|+||+|+|+|++++|+.||...+..
T Consensus       148 -------~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~  220 (429)
T KOG0595|consen  148 -------NDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK  220 (429)
T ss_pred             -------CCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence                   111267999999999987654  35689999999999999999999999999999999999999999988887


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +.+..+.+....+|.                                              .....++.+.+|+...|+.
T Consensus       221 eL~~~~~k~~~~~~~----------------------------------------------~~~~~s~~~~~Ll~~ll~~  254 (429)
T KOG0595|consen  221 ELLLYIKKGNEIVPV----------------------------------------------LPAELSNPLRELLISLLQR  254 (429)
T ss_pred             HHHHHHhccccccCc----------------------------------------------hhhhccCchhhhhhHHHhc
Confidence            776655443222111                                              1123344467899999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCcc
Q 047395          408 DPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ||..|.+..+.+.|+++..+--
T Consensus       255 ~~~~~~~~~~~~~~~~l~~~p~  276 (429)
T KOG0595|consen  255 NPKDRISFEDFFDHPFLAANPQ  276 (429)
T ss_pred             CccccCchHHhhhhhhcccCcc
Confidence            9999999999999999876543

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=3.6e-54  Score=403.48  Aligned_cols=285  Identities=27%  Similarity=0.447  Sum_probs=230.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|+++++||+|+||.||+|+.+.||..+|+|++++...    ..+....|-.+|.....     ++||+++-.|++..
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds-----~~vVKLyYsFQD~~  214 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDS-----PWVVKLYYSFQDKE  214 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCC-----CcEEEEEEEecCCC
Confidence            4789999999999999999999999999999999986543    34556777777777554     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ++||||||+ ||++..+|.+.+  .|++..++.++.+++.|++.||+.|+|||||||+|+||+..|++|++||||+....
T Consensus       215 ~LYLiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~  292 (550)
T KOG0605|consen  215 YLYLIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD  292 (550)
T ss_pred             eeEEEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhh
Confidence            999999999 999999999876  79999999999999999999999999999999999999999999999999985433


Q ss_pred             CCccccc-cCC-----CCCCeEEeecCCc--cccc---------------CCccccccCCCcchhHHHhCCCCCccchHH
Q 047395          249 TDVNYYK-RLP-----KSSAIKVIDFGST--AYEH---------------QEHNYIVSTRHYRAPEVILGLGWSYPCDMW  305 (432)
Q Consensus       249 ~~~~~~~-~~~-----~~~~~kl~Dfg~a--~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDiw  305 (432)
                      ....... +.+     .....+-.||...  ....               .-....+|||.|+|||++.+.+|+..+|+|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW  372 (550)
T KOG0605|consen  293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW  372 (550)
T ss_pred             hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence            3221110 000     1112233444421  0000               001236899999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhh
Q 047395          306 SVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL  385 (432)
Q Consensus       306 SlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (432)
                      |||||+||||.|.+||.+.+..+.+..|......+                     .+|                     
T Consensus       373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l---------------------~fP---------------------  410 (550)
T KOG0605|consen  373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETL---------------------KFP---------------------  410 (550)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhc---------------------cCC---------------------
Confidence            99999999999999999999999888886643211                     111                     


Q ss_pred             hhhhcccchHHHHHHHHHccccCCCCCC---CHHHHhcCCCCCCCccCC
Q 047395          386 VMQHVDHSAGYLIDLLQGLLRYDPSSRL---TAHDALKHPFFTRDYYRR  431 (432)
Q Consensus       386 ~~~~~~~~~~~l~~li~~~L~~dP~~R~---ta~elL~hp~f~~~~~~~  431 (432)
                         ....++++++|||.+||. ||++|+   +++||.+||||++..|+.
T Consensus       411 ---~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~  455 (550)
T KOG0605|consen  411 ---EEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDH  455 (550)
T ss_pred             ---CcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcch
Confidence               112456779999999999 999999   499999999999988764

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=7.5e-54  Score=379.05  Aligned_cols=287  Identities=30%  Similarity=0.478  Sum_probs=234.9

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ..-.+.|+.+++|++|+||.||+|+++.|++.||+|.++-..   ...-...+||.+|..++|     +|||.+.++...
T Consensus        72 Crsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H-----~NIV~vkEVVvG  146 (419)
T KOG0663|consen   72 CRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARH-----PNIVEVKEVVVG  146 (419)
T ss_pred             cccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCC-----CCeeeeEEEEec
Confidence            344567999999999999999999999999999999997433   223457899999999987     999999988764


Q ss_pred             --CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          168 --RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       168 --~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                        -+.+|+|||||..+|..++..-. .+|...+++.++.|++.||+|||.+.|+||||||+|+|+               
T Consensus       147 ~~~d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---------------  210 (419)
T KOG0663|consen  147 SNMDKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---------------  210 (419)
T ss_pred             cccceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---------------
Confidence              35799999999999999998765 579999999999999999999999999999999999994               


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                  ...+.+||+|||+|+..+..   .+..+-|.+|+|||++.+.+ |+++.|+||+|||+.||+++++.|
T Consensus       211 ------------~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf  278 (419)
T KOG0663|consen  211 ------------SHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLF  278 (419)
T ss_pred             ------------ccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCC
Confidence                        45667788888888776655   45567899999999999875 899999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcc-cchHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD-HSAGYLIDL  400 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l  400 (432)
                      .+.+..+++..|.+.+|.+.+..|+...+....-    ...++..              ...++.....- .+++...+|
T Consensus       279 ~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k----~~~f~~~--------------pyn~lr~kF~~~~lse~g~~L  340 (419)
T KOG0663|consen  279 PGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVK----KMTFSEH--------------PYNNLRKKFGALSLSEQGFDL  340 (419)
T ss_pred             CCCchHHHHHHHHHHhCCCccccCCCccccchhh----ccccCCC--------------CchhhhhhccccccchhHHHH
Confidence            9999999999999999999887766554432110    0001100              00111111111 156778999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ++++|.+||.+|.||.|+|+|+||.+.-
T Consensus       341 ln~llt~dP~kR~tA~~~L~h~~F~e~P  368 (419)
T KOG0663|consen  341 LNKLLTYDPGKRITAEDGLKHEYFRETP  368 (419)
T ss_pred             HHHHhccCccccccHHHhhcccccccCC
Confidence            9999999999999999999999998854

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-52  Score=385.20  Aligned_cols=344  Identities=32%  Similarity=0.555  Sum_probs=274.5

Q ss_pred             CCCCCCCCCCCceeecCceec-CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcC
Q 047395           74 PQWRNDDKDGHYLFALGENLT-SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD  152 (432)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~-~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~  152 (432)
                      .....+.++|++++.+|+.+. .||.+.++||.|.|++||+|+|..+.+.||+|+++......+..+.||++|+.++..+
T Consensus        56 E~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~D  135 (590)
T KOG1290|consen   56 EDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGD  135 (590)
T ss_pred             cChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcC
Confidence            345567789999999999999 8999999999999999999999999999999999999999999999999999998876


Q ss_pred             CC---CCceeEeeccccc----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCC
Q 047395          153 RS---GSRCVQIRNWFDY----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLK  224 (432)
Q Consensus       153 ~~---~~~iv~~~~~~~~----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlk  224 (432)
                      ..   ...||+|++.|..    +.|+|+|+|++|.+|..+|....++.++...++.|++||+.||.|||. .||||.|||
T Consensus       136 p~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlK  215 (590)
T KOG1290|consen  136 PNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLK  215 (590)
T ss_pred             CCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCC
Confidence            33   3468999999974    569999999999999999999988899999999999999999999995 699999999


Q ss_pred             CCcEEeecCCc-----------cc------------c----------------------------------C--C-----
Q 047395          225 PENILFVSPEY-----------LK------------I----------------------------------P--D-----  240 (432)
Q Consensus       225 p~NIli~~~~~-----------~k------------~----------------------------------~--d-----  240 (432)
                      |+|||+.....           ++            -                                  .  +     
T Consensus       216 PENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~  295 (590)
T KOG1290|consen  216 PENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIE  295 (590)
T ss_pred             cceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccccccc
Confidence            99999853200           00            0                                  0  0     


Q ss_pred             -------------cccccCCCCC------------------cc--------------------------ccc--------
Q 047395          241 -------------YKVTARSPTD------------------VN--------------------------YYK--------  255 (432)
Q Consensus       241 -------------f~~~~~~~~~------------------~~--------------------------~~~--------  255 (432)
                                   ++........                  ..                          ...        
T Consensus       296 ~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~  375 (590)
T KOG1290|consen  296 EEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIA  375 (590)
T ss_pred             ccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccc
Confidence                         0000000000                  00                          000        


Q ss_pred             ----------cCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC-
Q 047395          256 ----------RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH-  324 (432)
Q Consensus       256 ----------~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~-  324 (432)
                                .-.....+||+|||.|++.....+.-+.|..|+|||++.+..|++.+||||++|++|||+||.+.|... 
T Consensus       376 ~n~~v~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhs  455 (590)
T KOG1290|consen  376 SNPLVNPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHS  455 (590)
T ss_pred             cccccCCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCC
Confidence                      011234689999999999888888889999999999999999999999999999999999999999653 


Q ss_pred             -----CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCC---CCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          325 -----ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEG---ATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       325 -----~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                           .+.++++.|.+++|.+|..+.....-..+.|.++|.+..-..   +...+.+....          ......+.+
T Consensus       456 G~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY----------~~s~e~A~~  525 (590)
T KOG1290|consen  456 GENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKY----------EWSEEDAQQ  525 (590)
T ss_pred             CCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHh----------CCCHHHHHH
Confidence                 368899999999999999988877777777777775532211   11111111111          123345667


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +.|||.-||+.+|++|+||.++|+|||++..
T Consensus       526 fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~  556 (590)
T KOG1290|consen  526 FSDFLSPMLEFDPEKRPTAAQCLKHPWLNPV  556 (590)
T ss_pred             HHHHHHHHHhcCccccccHHHHhcCccccCC
Confidence            8999999999999999999999999999853

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-53  Score=396.76  Aligned_cols=282  Identities=29%  Similarity=0.488  Sum_probs=232.2

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC-
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR-  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~-  168 (432)
                      -.+.|+.+++||+|.||.||+|++..+|+.||+|.++...   .......+||.+|++|.|     |||+++.+..... 
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~H-----pNIikL~eivt~~~  189 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDH-----PNIIKLEEIVTSKL  189 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCC-----CcccceeeEEEecC
Confidence            3467999999999999999999999999999999997433   334567799999999998     9999999988765 


Q ss_pred             -CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 -NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 -~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                       ..+|||+|||..+|.-++.... -.|++.+++.+++||+.||+|||++||+|||||.+||||+.               
T Consensus       190 ~~siYlVFeYMdhDL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn---------------  253 (560)
T KOG0600|consen  190 SGSIYLVFEYMDHDLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDN---------------  253 (560)
T ss_pred             CceEEEEEecccchhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcC---------------
Confidence             7899999999999999998754 46999999999999999999999999999999999999654               


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccC----CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQ----EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                  ++.+||+|||+|++...    ..+..+-|.+|+|||+++|. .|+.++|+||+||||.||++|++.|.
T Consensus       254 ------------~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~  321 (560)
T KOG0600|consen  254 ------------NGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQ  321 (560)
T ss_pred             ------------CCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcC
Confidence                        55666677777664322    23446789999999999987 59999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.++.+++..|.+++|.+.+..|+...-+....+.                    ..........+.....+....+|+.
T Consensus       322 G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~k--------------------p~~~y~r~l~E~~~~~~~~~l~Ll~  381 (560)
T KOG0600|consen  322 GRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFK--------------------PQQPYKRRLRETFKDFPASALDLLE  381 (560)
T ss_pred             CccHHHHHHHHHHHhCCCChhccccccCCcccccC--------------------CCCcccchHHHHhccCCHHHHHHHH
Confidence            99999999999999999998876622211100000                    0011112222334567788999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .||..||.+|.||.++|+|+||+..
T Consensus       382 ~lL~ldP~kR~tA~~aL~seyF~t~  406 (560)
T KOG0600|consen  382 KLLSLDPDKRGTASSALQSEYFTTE  406 (560)
T ss_pred             HHhccCccccccHHHHhcCcccccC
Confidence            9999999999999999999999654

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-53  Score=381.77  Aligned_cols=283  Identities=29%  Similarity=0.540  Sum_probs=232.8

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec---hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-  167 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-  167 (432)
                      .+..+|..++.||.|+||.|+.|.++.+|+.||||.+..   .........+|+++|+.++|     +||+.+.+++.. 
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~H-----eNIi~l~di~~p~   93 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRH-----ENIIGLLDIFRPP   93 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcC-----CCcceEEeecccc
Confidence            445678889999999999999999999999999998862   23445667789999888887     999999998865 


Q ss_pred             ----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          168 ----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       168 ----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                          -+.+|+|+|+++.+|.+.++.+.  .+++..+..+++||+.||+|+|+.||+||||||+|+|++.           
T Consensus        94 ~~~~f~DvYiV~elMetDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~-----------  160 (359)
T KOG0660|consen   94 SRDKFNDVYLVFELMETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNA-----------  160 (359)
T ss_pred             cccccceeEEehhHHhhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcccccccccchhheeecc-----------
Confidence                36799999999999999999865  5999999999999999999999999999999999999655           


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCccccc-----CCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH-----QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg  317 (432)
                                      +..+||+|||+|+...     ...+..+.|.+|+|||++... .|+.+.||||+|||+.||++|
T Consensus       161 ----------------~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~g  224 (359)
T KOG0660|consen  161 ----------------DCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTG  224 (359)
T ss_pred             ----------------CCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcC
Confidence                            4456777777776653     233567889999999998754 699999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcc-hhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPA-EKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      ++.|.|.+..+++..|...+|.++++.+..+.... ..++.... ..|.                 .. .....+..++.
T Consensus       225 kplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp-~~p~-----------------~~-f~~~fp~a~p~  285 (359)
T KOG0660|consen  225 KPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLP-QIPK-----------------QP-FSSIFPNANPL  285 (359)
T ss_pred             CCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCC-CCCC-----------------CC-HHHHcCCCCHH
Confidence            99999999999999999999999988877765322 22222111 0000                 00 11223467888


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +.||+.+||.+||.+|+|++|+|+||||..-
T Consensus       286 AidLlekmL~fdP~kRita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  286 AIDLLEKMLVFDPKKRITAEEALAHPYLAPY  316 (359)
T ss_pred             HHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence            9999999999999999999999999999764

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-52  Score=398.52  Aligned_cols=253  Identities=32%  Similarity=0.504  Sum_probs=217.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-----h-hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-----K-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-----~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      ...++|++.+.||+|+||+|++|.+..+++.||+|++++.     . ...+.+.+|+.+++.+.+    ||||+++++++
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~----HpnI~~l~ev~   89 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRS----HPNIIRLLEVF   89 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhcc----CCCEeEEEEEE
Confidence            3457899999999999999999999999999999987653     1 234567789999999983    29999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      .....+|+||||| ||+|.+++...+  ++.+..++.+++||+.|++|||++||+||||||+|||++             
T Consensus        90 ~t~~~~~ivmEy~~gGdL~~~i~~~g--~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld-------------  154 (370)
T KOG0583|consen   90 ATPTKIYIVMEYCSGGDLFDYIVNKG--RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLD-------------  154 (370)
T ss_pred             ecCCeEEEEEEecCCccHHHHHHHcC--CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEec-------------
Confidence            9999999999999 899999999944  799999999999999999999999999999999999964             


Q ss_pred             cCCCCCccccccCCCC-CCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCC-CC-ccchHHHHHHHHHHHHhCC
Q 047395          245 ARSPTDVNYYKRLPKS-SAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLG-WS-YPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~-~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDiwSlGvil~elltg~  318 (432)
                                    .+ +.+||+|||++...   .....+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|.
T Consensus       155 --------------~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~  220 (370)
T KOG0583|consen  155 --------------GNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR  220 (370)
T ss_pred             --------------CCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC
Confidence                          44 77888888888765   34456789999999999999987 85 7899999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccc-hHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS-AGYL  397 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l  397 (432)
                      .||...+.......|.+....+|                                                 ..+ +.++
T Consensus       221 ~PF~d~~~~~l~~ki~~~~~~~p-------------------------------------------------~~~~S~~~  251 (370)
T KOG0583|consen  221 LPFDDSNVPNLYRKIRKGEFKIP-------------------------------------------------SYLLSPEA  251 (370)
T ss_pred             CCCCCccHHHHHHHHhcCCccCC-------------------------------------------------CCcCCHHH
Confidence            99998666665555433332222                                                 233 6678


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ++||.+||..||.+|+|+.++++||||+.
T Consensus       252 ~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  252 RSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            99999999999999999999999999997

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=6.6e-51  Score=406.43  Aligned_cols=324  Identities=38%  Similarity=0.702  Sum_probs=243.7

Q ss_pred             CCceeecCcee---cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCC-CCCce
Q 047395           83 GHYLFALGENL---TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR-SGSRC  158 (432)
Q Consensus        83 ~~~~~~~~~~~---~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~-~~~~i  158 (432)
                      +.+....++.+   .++|+++++||+|+||+||+|++..+++.||||+++...........|+.+++.+.+... .+.++
T Consensus       114 ~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i  193 (467)
T PTZ00284        114 GHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPL  193 (467)
T ss_pred             CceeEecCCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcce
Confidence            34445555544   578999999999999999999999999999999997655555567789999999887543 34568


Q ss_pred             eEeecccccC-CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCcc
Q 047395          159 VQIRNWFDYR-NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYL  236 (432)
Q Consensus       159 v~~~~~~~~~-~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~  236 (432)
                      +.+++++... .++|+|||++|++|.+++.+.+  .+++..++.++.||+.||+|||+ .|||||||||+|||++.++..
T Consensus       194 ~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~  271 (467)
T PTZ00284        194 MKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTV  271 (467)
T ss_pred             eeeEEEEEcCCceEEEEEeccCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcc
Confidence            8898888754 6899999999999999998764  69999999999999999999997 599999999999999876532


Q ss_pred             ccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh
Q 047395          237 KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       237 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt  316 (432)
                      .  ++.....         .......+||+|||.+..........+||+.|+|||++.+..++.++|||||||++|||++
T Consensus       272 ~--~~~~~~~---------~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~ellt  340 (467)
T PTZ00284        272 V--DPVTNRA---------LPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYT  340 (467)
T ss_pred             c--ccccccc---------cCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHh
Confidence            1  1111000         0123456999999988766555666789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcc-hhhhc-cCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPA-EKFVR-RGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       317 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      |++||.+.+..+.+..+...++.+|..+........ ..+.. .+... +.  .....+...........      ....
T Consensus       341 G~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~------~~~~  411 (467)
T PTZ00284        341 GKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLR-PC--TDPKHLARIARARPVRE------VIRD  411 (467)
T ss_pred             CCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccccc-cc--CCHHHHHhhhcccchhh------hhch
Confidence            999999999999999999999999988765432211 11111 11000 00  00011111110000000      0124


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +.+.|||.+||++||++|||++|+|+||||.+.+
T Consensus       412 ~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~  445 (467)
T PTZ00284        412 DLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY  445 (467)
T ss_pred             HHHHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence            5688999999999999999999999999998743

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.1e-53  Score=404.12  Aligned_cols=250  Identities=30%  Similarity=0.550  Sum_probs=221.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +-|++++.||.|+.|.|-+|++..||+.+|||++.+.    ......+.+|+-+|+.|.|     ||++++++++++..+
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~H-----pnVl~LydVwe~~~~   86 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEH-----PNVLRLYDVWENKQH   86 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcC-----CCeeeeeeeeccCce
Confidence            4588999999999999999999999999999999653    2334568899999999998     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+|+||+ ||.|+++|..++  ++++.++.++++||+.|+.|||..+|+||||||+|+|                    
T Consensus        87 lylvlEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlL--------------------  144 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLL--------------------  144 (786)
T ss_pred             EEEEEEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhh--------------------
Confidence            99999999 999999999886  7999999999999999999999999999999999999                    


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                             ++..+.+||+|||+|......  -.+.||+|+|.|||++.|.+| +.++||||+|||||.||||+.||++.+.
T Consensus       145 -------Ld~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi  217 (786)
T KOG0588|consen  145 -------LDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI  217 (786)
T ss_pred             -------hhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH
Confidence                   455666999999998775443  356799999999999999998 5899999999999999999999998777


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      ...+..+.+....+|                                                 ..++.++++||.+||.
T Consensus       218 r~LLlKV~~G~f~MP-------------------------------------------------s~Is~eaQdLLr~ml~  248 (786)
T KOG0588|consen  218 RVLLLKVQRGVFEMP-------------------------------------------------SNISSEAQDLLRRMLD  248 (786)
T ss_pred             HHHHHHHHcCcccCC-------------------------------------------------CcCCHHHHHHHHHHhc
Confidence            776666655544443                                                 3677889999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 047395          407 YDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .||++|+|.+||++|||+..-
T Consensus       249 VDp~~RiT~~eI~kHP~l~g~  269 (786)
T KOG0588|consen  249 VDPSTRITTEEILKHPFLSGY  269 (786)
T ss_pred             cCccccccHHHHhhCchhhcC
Confidence            999999999999999999763

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-54  Score=366.70  Aligned_cols=259  Identities=25%  Similarity=0.433  Sum_probs=226.1

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.+.|++.+.||+|.|+.|+++.+..+|+.+|+|+++..   ....+.+.+|+++...|+|     |||+++++.+...
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqH-----P~IvrL~~ti~~~   82 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-----PNIVRLHDSIQEE   82 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCC-----CcEeehhhhhccc
Confidence            4567899999999999999999999999999999998632   2356788999999999998     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      ...|+|+|++ |++|..-|-...  -+++..+..+++||++||.|+|.+||||||+||+|+|+.+               
T Consensus        83 ~~~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLAS---------------  145 (355)
T KOG0033|consen   83 SFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLAS---------------  145 (355)
T ss_pred             ceeEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeee---------------
Confidence            9999999999 999977665543  4899999999999999999999999999999999999865               


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                               .+....+||+|||+|.......  ...+|||.|||||++...+|+..+|||+.|||||-|+.|.+||.+.+
T Consensus       146 ---------K~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~  216 (355)
T KOG0033|consen  146 ---------KAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED  216 (355)
T ss_pred             ---------ccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc
Confidence                     4456678999999987765332  34689999999999999999999999999999999999999999988


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ....++.|.......|.                                             ..++.+++++++||++||
T Consensus       217 ~~rlye~I~~g~yd~~~---------------------------------------------~~w~~is~~Ak~LvrrML  251 (355)
T KOG0033|consen  217 QHRLYEQIKAGAYDYPS---------------------------------------------PEWDTVTPEAKSLIRRML  251 (355)
T ss_pred             HHHHHHHHhccccCCCC---------------------------------------------cccCcCCHHHHHHHHHHh
Confidence            88888887665544432                                             123567788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ..||.+|+||.|+|+|||+.+
T Consensus       252 ~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  252 TVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             ccChhhhccHHHHhCCchhcc
Confidence            999999999999999999976

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=8.3e-52  Score=376.09  Aligned_cols=285  Identities=27%  Similarity=0.395  Sum_probs=234.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .+.|++++.||.|.-|+||+|+.+.++..+|+|++.+..    +...++..|.+||..+.|     |.++.++..|+.++
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDH-----PFlPTLYa~fet~~  150 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDH-----PFLPTLYASFETDK  150 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCC-----Cccchhhheeeccc
Confidence            467999999999999999999999999999999997543    233467779999999988     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ..|+||||| ||+|..+.+++..+.|++..++.++..|+.||+|||-.|||.|||||+||||.++|++.++||.|+.+..
T Consensus       151 ~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~  230 (459)
T KOG0610|consen  151 YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCP  230 (459)
T ss_pred             eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCC
Confidence            999999999 9999999999988899999999999999999999999999999999999999999999999999987654


Q ss_pred             CCccccccCC-----CCCCeE---E----------------eecCC--------cccccCCccccccCCCcchhHHHhCC
Q 047395          249 TDVNYYKRLP-----KSSAIK---V----------------IDFGS--------TAYEHQEHNYIVSTRHYRAPEVILGL  296 (432)
Q Consensus       249 ~~~~~~~~~~-----~~~~~k---l----------------~Dfg~--------a~~~~~~~~~~~gt~~y~aPE~~~~~  296 (432)
                      .........+     ......   +                .|.+.        |...+.....++||-.|.|||++.|.
T Consensus       231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~  310 (459)
T KOG0610|consen  231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE  310 (459)
T ss_pred             CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC
Confidence            3222211100     000000   1                12221        11122233457999999999999999


Q ss_pred             CCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHh
Q 047395          297 GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV  376 (432)
Q Consensus       297 ~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (432)
                      ..+.++|+|+|||++|||+.|..||.+.+..+.+..|......+|.                                  
T Consensus       311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~----------------------------------  356 (459)
T KOG0610|consen  311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPE----------------------------------  356 (459)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCC----------------------------------
Confidence            9999999999999999999999999999998887776543333321                                  


Q ss_pred             hcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCC----HHHHhcCCCCCCCccC
Q 047395          377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLT----AHDALKHPFFTRDYYR  430 (432)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~t----a~elL~hp~f~~~~~~  430 (432)
                                   ...++..++|||+++|.+||.+|+.    |.||.+||||++.+|.
T Consensus       357 -------------~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa  401 (459)
T KOG0610|consen  357 -------------EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA  401 (459)
T ss_pred             -------------CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChh
Confidence                         1245667999999999999999998    9999999999998774

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.6e-51  Score=370.80  Aligned_cols=284  Identities=31%  Similarity=0.521  Sum_probs=230.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh---hhHhHHHHHHHHHHHHhcCCCCCc-eeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~-iv~~~~~~~~~~  169 (432)
                      ...|+.+++||+|+||+||+|+++.+|+.||+|.++....   ......+|+.+++.|+|     +| |+.+++++...+
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~-----~~~iv~L~dv~~~~~   84 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSH-----ANHIVRLHDVIHTSN   84 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCC-----CcceEEEEeeeeecc
Confidence            3468888999999999999999999999999999975433   45677899999999998     77 999999988766


Q ss_pred             ------eEEEEEccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCc
Q 047395          170 ------HICIVFEMLGPSLYDFLRKNNY--RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       170 ------~~~lv~e~~~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                            .+++|+||+..+|.+++.....  ..++...++.+++||+.||+|||+++|+||||||+||||++         
T Consensus        85 ~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~---------  155 (323)
T KOG0594|consen   85 NHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS---------  155 (323)
T ss_pred             cccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC---------
Confidence                  8999999999999999998653  25888999999999999999999999999999999999654         


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhC
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg  317 (432)
                                        .+.+||+|||+|+...   ...+..++|.+|+|||++.+. .|+...||||+|||++||+++
T Consensus       156 ------------------~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~  217 (323)
T KOG0594|consen  156 ------------------SGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTR  217 (323)
T ss_pred             ------------------CCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhC
Confidence                              5566777777766433   223456889999999999998 689999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ++.|.+.++.+++..|.+.+|.+....|+.+....+.-.     .++....             ... .....+...+..
T Consensus       218 ~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~-----~f~~~~~-------------~~~-l~~~~~~~~~~~  278 (323)
T KOG0594|consen  218 RPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKA-----PFPKWPG-------------PKD-LSSILPKLDPDG  278 (323)
T ss_pred             CCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccc-----cCcCCCC-------------ccc-hHHhccccCccH
Confidence            999999999999999999999988765555443222111     1111110             001 111122333568


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .+++.+||+.+|.+|.||+.+|.||||....
T Consensus       279 ~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  279 IELLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             HHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence            8999999999999999999999999998763

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-51  Score=395.87  Aligned_cols=255  Identities=27%  Similarity=0.422  Sum_probs=219.0

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|.++++||+|+||+|++|..+.+++.+|||++++..    ...+..+.|.+|+....    .||.++.++..|++.+
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~----~HPFL~~L~~~fQT~~  442 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN----RHPFLVNLFSCFQTKE  442 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc----cCCeEeecccccccCC
Confidence            468999999999999999999999999999999998643    44567888999988876    3599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ++|+||||+ ||++..+.+.   ..|++..++.++..|+.||.|||++|||+||||.+|||++                 
T Consensus       443 ~l~fvmey~~Ggdm~~~~~~---~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD-----------------  502 (694)
T KOG0694|consen  443 HLFFVMEYVAGGDLMHHIHT---DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLD-----------------  502 (694)
T ss_pred             eEEEEEEecCCCcEEEEEec---ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEc-----------------
Confidence            999999999 8885444433   3699999999999999999999999999999999999955                 


Q ss_pred             CCccccccCCCCCCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                ..+.+||+|||+++..   +...+++||||.|||||++.+..|+.++|+|||||+|||||.|..||.+.+
T Consensus       503 ----------~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd  572 (694)
T KOG0694|consen  503 ----------TEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD  572 (694)
T ss_pred             ----------ccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence                      5556666666766542   345677899999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      +.+....|...-...|                                                 ..++.++.++|+++|
T Consensus       573 Eee~FdsI~~d~~~yP-------------------------------------------------~~ls~ea~~il~~ll  603 (694)
T KOG0694|consen  573 EEEVFDSIVNDEVRYP-------------------------------------------------RFLSKEAIAIMRRLL  603 (694)
T ss_pred             HHHHHHHHhcCCCCCC-------------------------------------------------CcccHHHHHHHHHHh
Confidence            9998887755332222                                                 245677899999999


Q ss_pred             ccCCCCCCC-----HHHHhcCCCCCCCccCC
Q 047395          406 RYDPSSRLT-----AHDALKHPFFTRDYYRR  431 (432)
Q Consensus       406 ~~dP~~R~t-----a~elL~hp~f~~~~~~~  431 (432)
                      .+||++|+.     +++|.+||||+...|+.
T Consensus       604 ~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~  634 (694)
T KOG0694|consen  604 RKNPEKRLGSGERDAEDIKKHPFFRSIDWDD  634 (694)
T ss_pred             ccCcccccCCCCCCchhhhhCCccccCCHHH
Confidence            999999994     68999999999987753

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-50  Score=371.71  Aligned_cols=271  Identities=27%  Similarity=0.386  Sum_probs=221.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+.|++.++||.|..++||+|+...++..||||++.-.  ....+.+.+|+..+..+.|     |||+.++..|..+..+
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~H-----PNIv~~~~sFvv~~~L   99 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDH-----PNIVTYHCSFVVDSEL   99 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCC-----CCcceEEEEEEeccee
Confidence            46799999999999999999999999999999999743  3335788999999999988     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||.|+ +|++.++++..-...++|..+..|++++++||.|||.+|.||||||+.||||+++|.+||+|||++.     
T Consensus       100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa-----  174 (516)
T KOG0582|consen  100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSA-----  174 (516)
T ss_pred             EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeee-----
Confidence            9999999 9999999998766679999999999999999999999999999999999999988888888888753     


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC--CCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                   .|.|-| .+..... .+++||+.|||||+++..  .|+.|+||||||++..||++|..||.......
T Consensus       175 -------------~l~~~G-~R~~~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk  239 (516)
T KOG0582|consen  175 -------------SLFDSG-DRQVTRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK  239 (516)
T ss_pred             -------------eecccC-ceeeEee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH
Confidence                         233333 1111111 567899999999997643  69999999999999999999999999887776


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ++-  ..+.+.+|.......+.                                     ......+..++.+|..||+.|
T Consensus       240 vLl--~tLqn~pp~~~t~~~~~-------------------------------------d~~k~~~ksf~e~i~~CL~kD  280 (516)
T KOG0582|consen  240 VLL--LTLQNDPPTLLTSGLDK-------------------------------------DEDKKFSKSFREMIALCLVKD  280 (516)
T ss_pred             HHH--HHhcCCCCCcccccCCh-------------------------------------HHhhhhcHHHHHHHHHHhhcC
Confidence            553  33444444221110000                                     011233446899999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCc
Q 047395          409 PSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~  428 (432)
                      |.+||||.++|+|+||++..
T Consensus       281 P~kRptAskLlkh~FFk~~k  300 (516)
T KOG0582|consen  281 PSKRPTASKLLKHAFFKKAK  300 (516)
T ss_pred             cccCCCHHHHhccHHHhhcc
Confidence            99999999999999998754

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1e-51  Score=387.39  Aligned_cols=251  Identities=31%  Similarity=0.518  Sum_probs=214.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+.   .+....+.+|++++..|+|     |||+.++++|+...++
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkH-----pniv~m~esfEt~~~~   76 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKH-----PNIVEMLESFETSAHL   76 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCC-----cchhhHHHhhcccceE
Confidence            5788999999999999999999999999999998643   3344568899999999998     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |+|+|||.|+|..+|...+  .++++.++.++.+++.||.|||+++|+|||+||.|||+                     
T Consensus        77 ~vVte~a~g~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---------------------  133 (808)
T KOG0597|consen   77 WVVTEYAVGDLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---------------------  133 (808)
T ss_pred             EEEehhhhhhHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---------------------
Confidence            9999999669999999876  79999999999999999999999999999999999994                     


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                            +..+.+|+||||+|+......   +...|||.|||||++.+.+|+..+|+||||||+||+++|++||...+..+
T Consensus       134 ------~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~  207 (808)
T KOG0597|consen  134 ------EKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQ  207 (808)
T ss_pred             ------cCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHH
Confidence                  556667777777776544332   33579999999999999999999999999999999999999998766555


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....|..-...                       ||                          ...+..+.+||+.+|.+|
T Consensus       208 Lv~~I~~d~v~-----------------------~p--------------------------~~~S~~f~nfl~gLL~kd  238 (808)
T KOG0597|consen  208 LVKSILKDPVK-----------------------PP--------------------------STASSSFVNFLQGLLIKD  238 (808)
T ss_pred             HHHHHhcCCCC-----------------------Cc--------------------------ccccHHHHHHHHHHhhcC
Confidence            55444332211                       22                          244566899999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCc
Q 047395          409 PSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~  428 (432)
                      |.+|+|..+++.|||.++..
T Consensus       239 P~~RltW~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  239 PAQRLTWTDLLGHPFWKGKI  258 (808)
T ss_pred             hhhcccHHHHhcChHHhhhh
Confidence            99999999999999997643

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.3e-52  Score=360.57  Aligned_cols=243  Identities=29%  Similarity=0.476  Sum_probs=207.0

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec---hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeec-ccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRN-WFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~-~~~~~  168 (432)
                      -...|+|+++||.|+||+||++.+..+|..||.|.++-   +.+.+.....|+.+|++|+|     ||||++++ .|..+
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~H-----pNIVqYy~~~f~~~   91 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNH-----PNIVQYYAHSFIED   91 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCC-----chHHHHHHHhhhcc
Confidence            35679999999999999999999999999999999863   34566788899999999998     99999998 45555


Q ss_pred             Ce-EEEEEccC-CCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHh--CC--cEeccCCCCcEEeecCCccccCC
Q 047395          169 NH-ICIVFEML-GPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHD--LR--LIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       169 ~~-~~lv~e~~-~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~--~~--ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      +. ++||||+| +|+|.+.++.  +..+.+++..++.++.|++.||..+|+  ..  |+||||||.||++          
T Consensus        92 ~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl----------  161 (375)
T KOG0591|consen   92 NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL----------  161 (375)
T ss_pred             chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE----------
Confidence            55 99999999 9999999974  233579999999999999999999998  45  9999999999995          


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhC
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg  317 (432)
                                       +.++.+||+|||+++......   ...+|||.||+||.+.+.+|+.+|||||+||++|||+.-
T Consensus       162 -----------------~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL  224 (375)
T KOG0591|consen  162 -----------------TANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCAL  224 (375)
T ss_pred             -----------------cCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhc
Confidence                             456678888888887765543   457999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCC-CCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          318 EALFQTHENLEHLAMMERVLGP-IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      .+||.+.+-.+....|...-.+ +|.                                                +.+|..
T Consensus       225 ~~PF~g~n~~~L~~KI~qgd~~~~p~------------------------------------------------~~YS~~  256 (375)
T KOG0591|consen  225 QSPFYGDNLLSLCKKIEQGDYPPLPD------------------------------------------------EHYSTD  256 (375)
T ss_pred             CCCcccccHHHHHHHHHcCCCCCCcH------------------------------------------------HHhhhH
Confidence            9999998766666666554221 221                                                245677


Q ss_pred             HHHHHHHccccCCCCCCCH
Q 047395          397 LIDLLQGLLRYDPSSRLTA  415 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta  415 (432)
                      +..||.-|+..||+.||+.
T Consensus       257 l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  257 LRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             HHHHHHHHccCCcccCCCc
Confidence            8999999999999999985

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.1e-49  Score=373.29  Aligned_cols=278  Identities=31%  Similarity=0.498  Sum_probs=222.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++.++||.|+||.||+|++..+++.||+|+++...  .....+.+|+.++..++|     +||+++++++...+..+
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~~~~~   79 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKH-----ANIVTLHDIIHTERCLT   79 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCC-----CCEeeEEEEEcCCCeEE
Confidence            56999999999999999999999999999999986432  234467789999999887     99999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +||||+.++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.+                   
T Consensus        80 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~-------------------  139 (288)
T cd07871          80 LVFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEK-------------------  139 (288)
T ss_pred             EEEeCCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC-------------------
Confidence            999999779999987654 358999999999999999999999999999999999996544                   


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              +.+||+|||++......   .....+|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+
T Consensus       140 --------~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~  211 (288)
T cd07871         140 --------GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE  211 (288)
T ss_pred             --------CCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                    45666666665543221   223467999999999876 468999999999999999999999999988888


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .+..+.+..+.++...++......+.. .   ..++...              ... ........+.++++||.+||++|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~--------------~~~-~~~~~~~~~~~~~dll~~mL~~d  272 (288)
T cd07871         212 ELHLIFRLLGTPTEETWPGITSNEEFR-S---YLFPQYR--------------AQP-LINHAPRLDTDGIDLLSSLLLYE  272 (288)
T ss_pred             HHHHHHHHhCCCChHHhhccccchhhh-c---cccCccC--------------CCc-hHHhCCCCCHHHHHHHHHhcCcC
Confidence            888888888888877766543322110 0   0011000              000 01122356777899999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 047395          409 PSSRLTAHDALKHPFF  424 (432)
Q Consensus       409 P~~R~ta~elL~hp~f  424 (432)
                      |.+|||++|+|+||||
T Consensus       273 p~~R~t~~~~l~hp~f  288 (288)
T cd07871         273 TKSRISAEAALRHSYF  288 (288)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.6e-51  Score=366.21  Aligned_cols=279  Identities=31%  Similarity=0.554  Sum_probs=229.2

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC----
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR----  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~----  168 (432)
                      ..-.|.-.+.+|.|+||.||+|...++++.||||.+-.....   -.+|+.+|..+.|     ||||++.-+|...    
T Consensus        22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---knrEl~im~~l~H-----pNIV~L~~~f~~~~~~d   93 (364)
T KOG0658|consen   22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY---KNRELQIMRKLDH-----PNIVRLLYFFSSSTESD   93 (364)
T ss_pred             eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc---CcHHHHHHHhcCC-----cCeeeEEEEEEecCCCc
Confidence            345799999999999999999999999999999988654432   3479999998877     9999999887532    


Q ss_pred             -CeEEEEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          169 -NHICIVFEMLGPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       169 -~~~~lv~e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                       -...+||||+..+|.++++..  ....++...++-+.+||++||.|||+.||+||||||.|||++.             
T Consensus        94 ~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~-------------  160 (364)
T KOG0658|consen   94 EVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP-------------  160 (364)
T ss_pred             hhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC-------------
Confidence             256799999999999999852  1246999999999999999999999999999999999999853             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                   ..+.+||||||.|+....  .......|..|+|||++.|. .|+.+.||||.||++.||+-|++.|.
T Consensus       161 -------------~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFp  227 (364)
T KOG0658|consen  161 -------------DTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFP  227 (364)
T ss_pred             -------------CCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccC
Confidence                         568899999999987543  34456779999999999987 59999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhh--hhhcccchHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV--MQHVDHSAGYLIDL  400 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l  400 (432)
                      |.+..+++..|.+.+|.+..+....+......+      .+|                .+....  .-.....++++.+|
T Consensus       228 G~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~------~~p----------------~ik~~~~~~~~~~~~~~d~~dl  285 (364)
T KOG0658|consen  228 GDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEF------KFP----------------QIKAHPWHKVFFKRLPPDALDL  285 (364)
T ss_pred             CCCHHHHHHHHHHHhCCCCHHHHhhcCcccccc------cCc----------------ccccccceeecccCCCHHHHHH
Confidence            999999999999999999987766554332110      111                000000  01234667789999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +.++|+++|.+|.++.|+|.||||...
T Consensus       286 l~~~L~Y~P~~R~~~~~~l~h~fFdel  312 (364)
T KOG0658|consen  286 LSKLLQYSPSKRLSALEALAHPFFDEL  312 (364)
T ss_pred             HHHHhccChhhcCCHHHHhcchhhHHh
Confidence            999999999999999999999999763

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7e-51  Score=384.22  Aligned_cols=254  Identities=28%  Similarity=0.442  Sum_probs=218.1

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ....|...++||+|+.|.||.|....+++.||||.+... ....+-+.+|+.+|+.++|     +|||.+++.|-..+.+
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H-----~NiVnfl~Sylv~deL  345 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHH-----PNIVNFLDSYLVGDEL  345 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccc-----hHHHHHHHHhccccee
Confidence            356799999999999999999999999999999999743 3456778899999999988     9999999999989999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ ||+|.|++....   ++|.++..|+++++.||+|||.+||+|||||.+|||+                    
T Consensus       346 WVVMEym~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL--------------------  402 (550)
T KOG0578|consen  346 WVVMEYMEGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL--------------------  402 (550)
T ss_pred             EEEEeecCCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe--------------------
Confidence            9999999 999999998764   9999999999999999999999999999999999995                    


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                             ..++.+||+|||++.....   ...+.+|||+|||||++....|++++||||||++++||+-|++||-..+..
T Consensus       403 -------~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl  475 (550)
T KOG0578|consen  403 -------TMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL  475 (550)
T ss_pred             -------ccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH
Confidence                   4556688888888776543   345679999999999999999999999999999999999999999865554


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      ..+..|... |.+                                             .....+.+|..++|||.+||+.
T Consensus       476 rAlyLIa~n-g~P---------------------------------------------~lk~~~klS~~~kdFL~~cL~~  509 (550)
T KOG0578|consen  476 RALYLIATN-GTP---------------------------------------------KLKNPEKLSPELKDFLDRCLVV  509 (550)
T ss_pred             HHHHHHhhc-CCC---------------------------------------------CcCCccccCHHHHHHHHHHhhc
Confidence            433333221 111                                             1123457788899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||.+|++|.|+|+||||+..
T Consensus       510 dv~~RasA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  510 DVEQRASAKELLEHPFLKMA  529 (550)
T ss_pred             chhcCCCHHHHhcChhhhhc
Confidence            99999999999999999653

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-50  Score=371.60  Aligned_cols=255  Identities=30%  Similarity=0.475  Sum_probs=204.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh-hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC--eE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN--HI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~--~~  171 (432)
                      .+|...+.||+|+||.||++.+..+|...|||.+..... ..+.+.+|+.+|..|+|     ||||++++......  .+
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~-----p~IV~~~G~~~~~~~~~~   91 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNH-----PNIVQYYGSSSSRENDEY   91 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCC-----CCEEeeCCccccccCeee
Confidence            458889999999999999999999999999999865321 14568899999999987     99999999755444  69


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +++|||+ +|+|.+++...+. .+++..++.+++||++||+|||++|||||||||+|||++..                 
T Consensus        92 ~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~-----------------  153 (313)
T KOG0198|consen   92 NIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS-----------------  153 (313)
T ss_pred             EeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC-----------------
Confidence            9999999 9999999999875 79999999999999999999999999999999999997541                 


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC------CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ------EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                               ++.+||+|||.+.....      ......||+.|||||++... ....++|||||||++.||+||+.||..
T Consensus       154 ---------~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~  224 (313)
T KOG0198|consen  154 ---------NGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE  224 (313)
T ss_pred             ---------CCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence                     45667777776654441      12346899999999999963 334599999999999999999999986


Q ss_pred             C-CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          324 H-ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       324 ~-~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      . ...+.+..+... ..                                              .+..++.+++++++||.
T Consensus       225 ~~~~~~~~~~ig~~-~~----------------------------------------------~P~ip~~ls~~a~~Fl~  257 (313)
T KOG0198|consen  225 FFEEAEALLLIGRE-DS----------------------------------------------LPEIPDSLSDEAKDFLR  257 (313)
T ss_pred             hcchHHHHHHHhcc-CC----------------------------------------------CCCCCcccCHHHHHHHH
Confidence            3 211111111000 00                                              01223457788999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +||..||++||||+++|+|||.+++.
T Consensus       258 ~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  258 KCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             HHhhcCcccCcCHHHHhhChhhhccc
Confidence            99999999999999999999997743

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-50  Score=379.83  Aligned_cols=263  Identities=34%  Similarity=0.531  Sum_probs=228.3

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      ...+...|++.+.||.|.||.||+|+.+.+|+.+|+|++.+...    ..+...+|+.+|+.+..    |||||.+++.|
T Consensus        30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~----hpniv~l~~~~  105 (382)
T KOG0032|consen   30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSG----HPNIVQLKDAF  105 (382)
T ss_pred             cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccC----CCCEEEEEEEE
Confidence            45667889999999999999999999999999999999975432    34688999999999983    39999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ++...+++|||+| ||.|.+.+...   .+++..+..++.||+.|+.|||+.||+||||||+|+|+...           
T Consensus       106 e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~-----------  171 (382)
T KOG0032|consen  106 EDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASK-----------  171 (382)
T ss_pred             EcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccc-----------
Confidence            9999999999999 99999999887   29999999999999999999999999999999999998652           


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                  ....+.+|++|||++.....  .....+||+.|+|||++....|+..+||||+||++|.|++|.+||.
T Consensus       172 ------------~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~  239 (382)
T KOG0032|consen  172 ------------DEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFW  239 (382)
T ss_pred             ------------cCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCc
Confidence                        12246899999999988766  3456799999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.+.......+...-..++                                             ...++.++..+.+||.
T Consensus       240 ~~~~~~~~~~i~~~~~~f~---------------------------------------------~~~w~~is~~akd~i~  274 (382)
T KOG0032|consen  240 GETEFEIFLAILRGDFDFT---------------------------------------------SEPWDDISESAKDFIR  274 (382)
T ss_pred             CCChhHHHHHHHcCCCCCC---------------------------------------------CCCccccCHHHHHHHH
Confidence            9887776665544322221                                             1223566788999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +||..||.+|+||.++|+|||++..
T Consensus       275 ~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  275 KLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             HhcccCcccCCCHHHHhcCccccCC
Confidence            9999999999999999999999874

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-49  Score=373.73  Aligned_cols=252  Identities=25%  Similarity=0.367  Sum_probs=212.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....    ...+.+.+|+.+++.+.|     +||+++++++.+.+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~~~~~   75 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH-----PFIIRLFWTEHDQRF   75 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCC-----CcHhhhHhhhccCCe
Confidence            46999999999999999999999999999999986432    234567789999998877     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++                  
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~------------------  135 (291)
T cd05612          76 LYMLMEYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD------------------  135 (291)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC------------------
Confidence            99999999 999999998764  699999999999999999999999999999999999964                  


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                               .++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       136 ---------~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~  206 (291)
T cd05612         136 ---------KEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI  206 (291)
T ss_pred             ---------CCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                     44568888888877655544556799999999999998899999999999999999999999988766555


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+......                       +                          +...+..+++||.+||+.||
T Consensus       207 ~~~i~~~~~~-----------------------~--------------------------~~~~~~~~~~li~~~l~~dp  237 (291)
T cd05612         207 YEKILAGKLE-----------------------F--------------------------PRHLDLYAKDLIKKLLVVDR  237 (291)
T ss_pred             HHHHHhCCcC-----------------------C--------------------------CccCCHHHHHHHHHHcCCCH
Confidence            4444322111                       1                          11335568899999999999


Q ss_pred             CCCCC-----HHHHhcCCCCCCCcc
Q 047395          410 SSRLT-----AHDALKHPFFTRDYY  429 (432)
Q Consensus       410 ~~R~t-----a~elL~hp~f~~~~~  429 (432)
                      .+|++     ++++++||||+...+
T Consensus       238 ~~R~~~~~~~~~~~l~h~~~~~~~~  262 (291)
T cd05612         238 TRRLGNMKNGADDVKNHRWFKSVDW  262 (291)
T ss_pred             HHccCCccCCHHHHhcCccccCCCH
Confidence            99995     999999999987544

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8e-51  Score=344.65  Aligned_cols=253  Identities=25%  Similarity=0.448  Sum_probs=224.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++.+.||+|.||.||+|+.+.++..||+|++.+.+    ....++.+|+++-..|+|     |||++++++|.+..
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~h-----pnilrlY~~fhd~~   95 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRH-----PNILRLYGYFHDSK   95 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCC-----ccHHhhhhheeccc
Confidence            467999999999999999999999999999999997544    234577889999888888     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+||++||. +|+|+..|.......+++..+..++.|++.||.|+|.++||||||||+|+|                   
T Consensus        96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlL-------------------  156 (281)
T KOG0580|consen   96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLL-------------------  156 (281)
T ss_pred             eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhc-------------------
Confidence            999999999 999999999766678999999999999999999999999999999999999                   


Q ss_pred             CCccccccCCCCCCeEEeecCCcccc-cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                              ++..+.+||+|||.+... .....+.|||..|.+||...+..++..+|+|++|++.||++.|.+||...+..
T Consensus       157 --------lg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~  228 (281)
T KOG0580|consen  157 --------LGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS  228 (281)
T ss_pred             --------cCCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH
Confidence                    555667888888877665 44556789999999999999999999999999999999999999999988888


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +.++.|.+.--.+|                                                 ..++..+.|||.+||..
T Consensus       229 etYkrI~k~~~~~p-------------------------------------------------~~is~~a~dlI~~ll~~  259 (281)
T KOG0580|consen  229 ETYKRIRKVDLKFP-------------------------------------------------STISGGAADLISRLLVK  259 (281)
T ss_pred             HHHHHHHHccccCC-------------------------------------------------cccChhHHHHHHHHhcc
Confidence            88877766544333                                                 24566789999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~  427 (432)
                      +|.+|++..|++.|||+...
T Consensus       260 ~p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  260 NPIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             CccccccHHHHhhhHHHHhc
Confidence            99999999999999998764

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1.6e-49  Score=379.24  Aligned_cols=252  Identities=28%  Similarity=0.446  Sum_probs=212.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||.||+|++..+++.||||+++...    ...+.+.+|+.++..+.|     +||+++++++..++.
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~~~~~   92 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH-----PFIVNMMCSFQDENR   92 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC-----CCCCcEEEEEEcCCE
Confidence            67999999999999999999999999999999997532    234567889999998877     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++                  
T Consensus        93 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~------------------  152 (329)
T PTZ00263         93 VYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD------------------  152 (329)
T ss_pred             EEEEEcCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC------------------
Confidence            99999999 999999998764  689999999999999999999999999999999999964                  


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                               .++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       153 ---------~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~  223 (329)
T PTZ00263        153 ---------NKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI  223 (329)
T ss_pred             ---------CCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH
Confidence                     45567888888777655555556899999999999999999999999999999999999999987665544


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+.....                       .+                          +..++..+.+||.+||+.||
T Consensus       224 ~~~i~~~~~-----------------------~~--------------------------p~~~~~~~~~li~~~L~~dP  254 (329)
T PTZ00263        224 YEKILAGRL-----------------------KF--------------------------PNWFDGRARDLVKGLLQTDH  254 (329)
T ss_pred             HHHHhcCCc-----------------------CC--------------------------CCCCCHHHHHHHHHHhhcCH
Confidence            433322111                       11                          11245568899999999999


Q ss_pred             CCCCC-----HHHHhcCCCCCCCcc
Q 047395          410 SSRLT-----AHDALKHPFFTRDYY  429 (432)
Q Consensus       410 ~~R~t-----a~elL~hp~f~~~~~  429 (432)
                      .+|++     ++++++||||++..+
T Consensus       255 ~~R~~~~~~~~~~ll~hp~f~~~~~  279 (329)
T PTZ00263        255 TKRLGTLKGGVADVKNHPYFHGANW  279 (329)
T ss_pred             HHcCCCCCCCHHHHhcCCccCCCCH
Confidence            99997     799999999987543

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=9.9e-49  Score=366.77  Aligned_cols=280  Identities=32%  Similarity=0.610  Sum_probs=220.5

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|++.+.||+|+||+||+|++..+++.||+|+++...   ...+.+.+|+.++..++|     +||+++++++...+.+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~   75 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQ-----ENIVELKEAFRRRGKL   75 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCC-----ccccchhhhEecCCEE
Confidence            47999999999999999999999999999999987432   234567789999998877     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |+||||+.+++.+.+.... ..+++..++.++.||+.||.|||+.||+||||||+||+++.                   
T Consensus        76 ~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~-------------------  135 (287)
T cd07848          76 YLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH-------------------  135 (287)
T ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC-------------------
Confidence            9999999555555554432 36999999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                              ++.+||+|||++......    .....||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..
T Consensus       136 --------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~  207 (287)
T cd07848         136 --------NDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI  207 (287)
T ss_pred             --------CCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH
Confidence                    445677777766543221    12346899999999999988999999999999999999999999998888


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+....+++|.............    ....++.....             ..........++..+.+||++||++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-------------~~~~~~~~~~~s~~~~dll~~~L~~  270 (287)
T cd07848         208 DQLFTIQKVLGPLPAEQMKLFYSNPRF----HGLRFPAVNHP-------------QSLERRYLGILSGVLLDLMKNLLKL  270 (287)
T ss_pred             HHHHHHHHhhCCCCHHHHHhhhccchh----cccccCcccCc-------------ccHHHhhhcccCHHHHHHHHHHccC
Confidence            888888888888887765543221110    00111110000             0011112235677899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 047395          408 DPSSRLTAHDALKHPFF  424 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f  424 (432)
                      ||++|||++|+|+||||
T Consensus       271 ~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         271 NPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.9e-48  Score=367.69  Aligned_cols=285  Identities=28%  Similarity=0.446  Sum_probs=213.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .++|++.+.||+|+||.||+|++..+++.||||+++...  .......+|+.+++.+.|     +||+++++++......
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~~~~   78 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKH-----ANIVLLHDIIHTKETL   78 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCC-----CCcCeEEEEEecCCeE
Confidence            367999999999999999999999999999999986432  223456789999998877     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |+||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.+                  
T Consensus        79 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~------------------  139 (303)
T cd07869          79 TLVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDT------------------  139 (303)
T ss_pred             EEEEECCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC------------------
Confidence            9999999889999987654 468999999999999999999999999999999999996554                  


Q ss_pred             cccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCc-
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN-  326 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~-  326 (432)
                               +.+||+|||++.....   ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+..+ 
T Consensus       140 ---------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~  210 (303)
T cd07869         140 ---------GELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI  210 (303)
T ss_pred             ---------CCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH
Confidence                     4566666666543221   12234689999999998764 578899999999999999999999987654 


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+.+..+....+.+....+........ + ....  +..  .....+         ...  ......++.+.+||.+||+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~--~~~--~~~~~~---------~~~--~~~~~~~~~~~dli~~mL~  273 (303)
T cd07869         211 QDQLERIFLVLGTPNEDTWPGVHSLPH-F-KPER--FTL--YSPKNL---------RQA--WNKLSYVNHAEDLASKLLQ  273 (303)
T ss_pred             HHHHHHHHHHhCCCChhhccchhhccc-c-cccc--ccc--cCCccH---------HHH--hhccCCChHHHHHHHHHhc
Confidence            345555555555554433222111000 0 0000  000  000000         000  0011245668899999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCc
Q 047395          407 YDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .||++|||+.|+|+||||++..
T Consensus       274 ~dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         274 CFPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             cCchhccCHHHHhcCcccccCC
Confidence            9999999999999999998753

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1e-48  Score=366.24  Aligned_cols=259  Identities=24%  Similarity=0.386  Sum_probs=209.5

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .|++.+.||+|+||+||+|.+..+++.||+|++....    .....+.+|+.++..+.|     ++++.+.+.+...+..
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~-----~~iv~~~~~~~~~~~~   75 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNS-----RFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCC-----CcEEEEEEEEccCCeE
Confidence            3789999999999999999999999999999986432    223356789999998877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      ++||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.                  
T Consensus        76 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~------------------  137 (285)
T cd05631          76 CLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDD------------------  137 (285)
T ss_pred             EEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC------------------
Confidence            9999999 899998887654456899999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                               ++.++|+|||++......  .....||..|+|||++.+..++.++|||||||++|+|++|+.||...+...
T Consensus       138 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~  208 (285)
T cd05631         138 ---------RGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV  208 (285)
T ss_pred             ---------CCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch
Confidence                     456777777776653221  233578999999999999999999999999999999999999998765433


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.......                                             ........+..+.+||.+||+.|
T Consensus       209 ~~~~~~~~~~~~---------------------------------------------~~~~~~~~s~~~~~li~~~l~~~  243 (285)
T cd05631         209 KREEVDRRVKED---------------------------------------------QEEYSEKFSEDAKSICRMLLTKN  243 (285)
T ss_pred             hHHHHHHHhhcc---------------------------------------------cccCCccCCHHHHHHHHHHhhcC
Confidence            222221111100                                             00112345667899999999999


Q ss_pred             CCCCCC-----HHHHhcCCCCCCCccCC
Q 047395          409 PSSRLT-----AHDALKHPFFTRDYYRR  431 (432)
Q Consensus       409 P~~R~t-----a~elL~hp~f~~~~~~~  431 (432)
                      |.+||+     ++++++||||.+..+++
T Consensus       244 P~~R~~~~~~~~~~~~~h~~~~~~~~~~  271 (285)
T cd05631         244 PKERLGCRGNGAAGVKQHPIFKNINFKR  271 (285)
T ss_pred             HHHhcCCCCCCHHHHhcCHhhcCCCHHH
Confidence            999997     89999999999877654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-49  Score=366.91  Aligned_cols=265  Identities=26%  Similarity=0.385  Sum_probs=210.0

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh---------------hhHhHHHHHHHHHHHHhcCCC
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---------------YREAAMTEIDVLELLKRYDRS  154 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---------------~~~~~~~E~~~l~~l~~~~~~  154 (432)
                      +....+.|++++.||+|.||.|-+|++..+++.||||++.+...               ..+...+||.+|+++.|    
T Consensus        92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H----  167 (576)
T KOG0585|consen   92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH----  167 (576)
T ss_pred             cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC----
Confidence            34456889999999999999999999999999999999964221               12578899999999988    


Q ss_pred             CCceeEeecccccC--CeEEEEEccC-CCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEe
Q 047395          155 GSRCVQIRNWFDYR--NHICIVFEML-GPSLYDFLRKNNYRP-FPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF  230 (432)
Q Consensus       155 ~~~iv~~~~~~~~~--~~~~lv~e~~-~~~L~~~l~~~~~~~-l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  230 (432)
                       +|||+|+++.++.  +.+|||+||| .|.+...=.   ..+ +++.+++.++++++.||+|||.+|||||||||+|+|+
T Consensus       168 -~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~---d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl  243 (576)
T KOG0585|consen  168 -PNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPP---DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL  243 (576)
T ss_pred             -cCeeEEEEeecCcccCceEEEEEeccCCccccCCC---CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE
Confidence             9999999999865  6899999999 776643321   234 8999999999999999999999999999999999998


Q ss_pred             ecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCC----CCccchHHH
Q 047395          231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG----WSYPCDMWS  306 (432)
Q Consensus       231 ~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDiwS  306 (432)
                      .++|++||+|||++...+...+                   ......-...+|||.|+|||...+..    .+.+.||||
T Consensus       244 ~~~g~VKIsDFGVs~~~~~~~~-------------------~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWa  304 (576)
T KOG0585|consen  244 SSDGTVKISDFGVSNEFPQGSD-------------------EGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWA  304 (576)
T ss_pred             cCCCcEEeeccceeeecccCCc-------------------cccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhh
Confidence            7766666666665543322100                   00001112268999999999998732    357889999


Q ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhh
Q 047395          307 VGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV  386 (432)
Q Consensus       307 lGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (432)
                      +||+||.|+.|+.||-+....+....|....-.+|                       +                     
T Consensus       305 lGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP-----------------------~---------------------  340 (576)
T KOG0585|consen  305 LGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFP-----------------------E---------------------  340 (576)
T ss_pred             hhhhHHHhhhccCCcccchHHHHHHHHhcCcccCC-----------------------C---------------------
Confidence            99999999999999999888887777655432222                       1                     


Q ss_pred             hhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       387 ~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                         .+++...++|||.+||++||++|+++.+|..|||..+..
T Consensus       341 ---~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g  379 (576)
T KOG0585|consen  341 ---NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDG  379 (576)
T ss_pred             ---cccccHHHHHHHHHHhhcChhheeehhhheecceeccCC
Confidence               123456689999999999999999999999999998764

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.2e-50  Score=347.85  Aligned_cols=257  Identities=30%  Similarity=0.506  Sum_probs=219.9

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---------hhhhHhHHHHHHHHHHHHhcCCCCCceeEee
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---------KKYREAAMTEIDVLELLKRYDRSGSRCVQIR  162 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---------~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~  162 (432)
                      .+-+.|.-.+.||.|..++|-++.++.+|..+|+|++.-.         ....+.-.+|+.+|+++..    ||+|+.+.
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~G----HP~II~l~   89 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMG----HPYIIDLQ   89 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcC----CCcEEEee
Confidence            3456788889999999999999999999999999998521         2334567789999998864    69999999


Q ss_pred             cccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCc
Q 047395          163 NWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       163 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                      ++|+.+..+++|+|+| .|.|+|+|...-  .+++...+.|++|+++|+.|||.++||||||||+|||            
T Consensus        90 D~yes~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENIL------------  155 (411)
T KOG0599|consen   90 DVYESDAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENIL------------  155 (411)
T ss_pred             eeccCcchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhhee------------
Confidence            9999999999999999 999999999865  6999999999999999999999999999999999999            


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhC------CCCCccchHHHHHHHHHH
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILG------LGWSYPCDMWSVGCILIE  313 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~sDiwSlGvil~e  313 (432)
                                     ++++.+++|+|||+|+......  ...||||+|+|||.+..      ..|+..+|+||+|||+|.
T Consensus       156 ---------------lddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyT  220 (411)
T KOG0599|consen  156 ---------------LDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYT  220 (411)
T ss_pred             ---------------eccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHH
Confidence                           5667789999999998765543  55799999999999853      358889999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccc
Q 047395          314 LCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS  393 (432)
Q Consensus       314 lltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (432)
                      |+.|.+||......-++..|.+....+..                                             +.++++
T Consensus       221 LLaGcpPFwHRkQmlMLR~ImeGkyqF~s---------------------------------------------peWadi  255 (411)
T KOG0599|consen  221 LLAGCPPFWHRKQMLMLRMIMEGKYQFRS---------------------------------------------PEWADI  255 (411)
T ss_pred             HHcCCCchhHHHHHHHHHHHHhcccccCC---------------------------------------------cchhhc
Confidence            99999999887777777766655433321                                             223456


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       394 ~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      +....|||.+||+.||.+|+|++|+|+||||.+
T Consensus       256 s~~~KdLIsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  256 SATVKDLISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             cccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence            777899999999999999999999999999953

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=3.1e-48  Score=372.05  Aligned_cols=279  Identities=30%  Similarity=0.526  Sum_probs=217.6

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC----
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR----  168 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~----  168 (432)
                      +|++.+.||+|+||.||+|++..+++.||||+++..   ......+.+|+.++..++|     +||+++++++...    
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~~~~~~~~~~~~~   75 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRH-----PDIVEIKHIMLPPSRRE   75 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCC-----CCEeeecceEeccCCCC
Confidence            699999999999999999999999999999998642   1223457789999999887     9999999887532    


Q ss_pred             -CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 -NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 -~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                       ..+|+||||++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++             
T Consensus        76 ~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~-------------  140 (338)
T cd07859          76 FKDIYVVFELMESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC-------------  140 (338)
T ss_pred             CceEEEEEecCCCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC-------------
Confidence             3589999999889999998754  699999999999999999999999999999999999965544             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhC--CCCCccchHHHHHHHHHHHHhCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                    .+||+|||++......      ....+||+.|+|||++.+  ..++.++|||||||++|+|++|++
T Consensus       141 --------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~  206 (338)
T cd07859         141 --------------KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP  206 (338)
T ss_pred             --------------cEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCC
Confidence                          5566666655432111      123578999999999876  578999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcch-hhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAE-KFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      ||.+.+....+..+....+.++......+..... .+..                 .......  .......+..++.+.
T Consensus       207 pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----------------~~~~~~~--~~~~~~~~~~~~~~~  267 (338)
T cd07859         207 LFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLS-----------------SMRKKQP--VPFSQKFPNADPLAL  267 (338)
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHH-----------------hhcccCC--CchHHhcCCCChHHH
Confidence            9999888888888888888877766554432110 0000                 0000000  000111234567789


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +||.+||+.||++|||++|+|+||||++.
T Consensus       268 ~li~~~l~~~P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         268 RLLERLLAFDPKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             HHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence            99999999999999999999999999763

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-49  Score=367.15  Aligned_cols=255  Identities=27%  Similarity=0.489  Sum_probs=229.6

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.+-|.+.+.||+|.|+.|-+|++..+|..||||++.+.+   .....+..|++.++.++|     ||||++|++.+..
T Consensus        15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQH-----pNiVRLYEViDTQ   89 (864)
T KOG4717|consen   15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQH-----PNIVRLYEVIDTQ   89 (864)
T ss_pred             ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcC-----cCeeeeeehhccc
Confidence            45677999999999999999999999999999999997654   345678899999999999     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      ..+|||+|+- +|+|++||.++. ..+.++.+++++.||+.|+.|+|+..+|||||||+||.|.+               
T Consensus        90 TKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE---------------  153 (864)
T KOG4717|consen   90 TKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE---------------  153 (864)
T ss_pred             ceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee---------------
Confidence            9999999999 899999999876 46999999999999999999999999999999999999843               


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccc--cCCccccccCCCcchhHHHhCCCCC-ccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYE--HQEHNYIVSTRHYRAPEVILGLGWS-YPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~--~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                 +-+.+||+|||++-..  +..-++.||+..|.|||++.|..|+ +++||||||||||.|++|++||+..
T Consensus       154 -----------KlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA  222 (864)
T KOG4717|consen  154 -----------KLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA  222 (864)
T ss_pred             -----------ecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc
Confidence                       5678999999987543  3445678999999999999999987 6789999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      ++.+.+.+|.......|.                                                 .++.+++|||..|
T Consensus       223 NDSETLTmImDCKYtvPs-------------------------------------------------hvS~eCrdLI~sM  253 (864)
T KOG4717|consen  223 NDSETLTMIMDCKYTVPS-------------------------------------------------HVSKECRDLIQSM  253 (864)
T ss_pred             cchhhhhhhhcccccCch-------------------------------------------------hhhHHHHHHHHHH
Confidence            999999988877666664                                                 4577799999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 047395          405 LRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      |+.||.+|.|.++|..|+|++..
T Consensus       254 LvRdPkkRAslEeI~s~~Wlq~~  276 (864)
T KOG4717|consen  254 LVRDPKKRASLEEIVSTSWLQAG  276 (864)
T ss_pred             HhcCchhhccHHHHhccccccCC
Confidence            99999999999999999999864

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.8e-48  Score=372.88  Aligned_cols=253  Identities=26%  Similarity=0.452  Sum_probs=211.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCC-cEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETG-ETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~-~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|++.+.||+|+||.||+|.+..++ ..||+|++....    ...+.+.+|+.++..+.|     |||+++++++...
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~Iv~~~~~~~~~  103 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH-----PFCVNLYGSFKDE  103 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC-----CCCcceEEEEEeC
Confidence            467999999999999999999876655 689999986432    234567789999998877     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++                
T Consensus       104 ~~~~lv~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~----------------  165 (340)
T PTZ00426        104 SYLYLVLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD----------------  165 (340)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC----------------
Confidence            9999999999 999999998764  699999999999999999999999999999999999964                


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                                 .++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..
T Consensus       166 -----------~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~  234 (340)
T PTZ00426        166 -----------KDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL  234 (340)
T ss_pred             -----------CCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH
Confidence                       455677888887766554455568999999999999988999999999999999999999999877655


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .....+......+                                                 +...++.+.++|.+||+.
T Consensus       235 ~~~~~i~~~~~~~-------------------------------------------------p~~~~~~~~~li~~~l~~  265 (340)
T PTZ00426        235 LIYQKILEGIIYF-------------------------------------------------PKFLDNNCKHLMKKLLSH  265 (340)
T ss_pred             HHHHHHhcCCCCC-------------------------------------------------CCCCCHHHHHHHHHHccc
Confidence            4444432211111                                                 123455688999999999


Q ss_pred             CCCCCC-----CHHHHhcCCCCCCCcc
Q 047395          408 DPSSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       408 dP~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      ||++|+     |++++++||||.+..+
T Consensus       266 dp~~R~~~~~~~~~~~~~hp~f~~~~~  292 (340)
T PTZ00426        266 DLTKRYGNLKKGAQNVKEHPWFGNIDW  292 (340)
T ss_pred             CHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence            999996     8999999999987543

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=7.4e-48  Score=380.54  Aligned_cols=280  Identities=27%  Similarity=0.504  Sum_probs=218.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-----
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-----  167 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-----  167 (432)
                      ...+|++.+.||+|+||.||+|.+..+++.||||++....   ....+|+.+++.++|     +||+++++++..     
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h-----~niv~l~~~~~~~~~~~  135 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNH-----INIIFLKDYYYTECFKK  135 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCC-----CCCcceeeeEeeccccc
Confidence            3568999999999999999999999999999999885432   234579999999887     999999887632     


Q ss_pred             ---CCeEEEEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          168 ---RNHICIVFEMLGPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       168 ---~~~~~lv~e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                         ...+++||||++++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.+         
T Consensus       136 ~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~---------  206 (440)
T PTZ00036        136 NEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPN---------  206 (440)
T ss_pred             CCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCC---------
Confidence               2357899999988998887642  22469999999999999999999999999999999999997532         


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~  319 (432)
                                       ...+||+|||+++....  .....+||+.|+|||++.+. .++.++|||||||++|||++|.+
T Consensus       207 -----------------~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~  269 (440)
T PTZ00036        207 -----------------THTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYP  269 (440)
T ss_pred             -----------------CCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                             23578888888765432  22345789999999998765 68999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.+..+.+..+...++.++............      ...+|...              ...+....+...+.++.+
T Consensus       270 pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~------~~~~~~~~--------------~~~l~~~~p~~~~~~~~~  329 (440)
T PTZ00036        270 IFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYA------DIKFPDVK--------------PKDLKKVFPKGTPDDAIN  329 (440)
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhh------cccCCccC--------------chhHHHHhccCCCHHHHH
Confidence            9999988888888888888777665543321111      00111100              011112223456778999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ||.+||++||.+|||+.|+|+||||..
T Consensus       330 li~~~L~~dP~~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        330 FISQFLKYEPLKRLNPIEALADPFFDD  356 (440)
T ss_pred             HHHHHCCCChhHCcCHHHHhCChhHHh
Confidence            999999999999999999999999965

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=9e-48  Score=360.82  Aligned_cols=279  Identities=30%  Similarity=0.508  Sum_probs=212.6

Q ss_pred             CceEEEeeeecccceEEEEEEecC-CCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc----
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRE-TGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD----  166 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~-~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~----  166 (432)
                      ++|++.+.||+|+||+||+|++.. +++.||+|+++...   .......+|+.+++.+...  .|+||+++++++.    
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~hpniv~~~~~~~~~~~   78 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF--EHPNVVRLFDVCTVSRT   78 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhccc--CCCCcceEEEEEecccC
Confidence            479999999999999999999864 46889999986432   2233556788887777532  3499999999874    


Q ss_pred             -cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 -YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 -~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                       ....+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.+            
T Consensus        79 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~------------  146 (290)
T cd07862          79 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS------------  146 (290)
T ss_pred             CCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCC------------
Confidence             3457999999998899999987655568999999999999999999999999999999999996544            


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                     +.++|+|||++.....  ......||+.|+|||++.+..++.++|||||||++|||++|.+||.+
T Consensus       147 ---------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  211 (290)
T cd07862         147 ---------------GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG  211 (290)
T ss_pred             ---------------CCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCC
Confidence                           4566667766654322  22345689999999999988999999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+..+.+..+....+.+....+..........       +..               ............++..+.+||.+
T Consensus       212 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-------~~~---------------~~~~~~~~~~~~~~~~~~~li~~  269 (290)
T cd07862         212 SSDVDQLGKILDVIGLPGEEDWPRDVALPRQA-------FHS---------------KSAQPIEKFVTDIDELGKDLLLK  269 (290)
T ss_pred             CCHHHHHHHHHHHhCCCChhhchhhhcccchh-------ccC---------------CCCCCHHHHccCCCHHHHHHHHH
Confidence            98888888887776644432221110000000       000               00000111223467778999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCC
Q 047395          404 LLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f  424 (432)
                      ||+.||++|||+.|+|+||||
T Consensus       270 ~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         270 CLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HhccCchhcCCHHHHhcCCCC
Confidence            999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.6e-48  Score=371.43  Aligned_cols=246  Identities=25%  Similarity=0.434  Sum_probs=202.5

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||.||+|++..+|+.||||+++...    .....+.+|+.++..+.|     +||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----p~i~~~~~~~~~~~~~~lv~e   75 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH-----PFLTALKYSFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC-----CCCCCEEEEEEcCCEEEEEEe
Confidence            46999999999999999999999999997532    223456778888888876     999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.                       
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~-----------------------  130 (323)
T cd05571          76 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDK-----------------------  130 (323)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC-----------------------
Confidence            99 999999998754  6999999999999999999999999999999999999654                       


Q ss_pred             cCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 047395          256 RLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM  332 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~  332 (432)
                          ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||...+.......
T Consensus       131 ----~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~  206 (323)
T cd05571         131 ----DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL  206 (323)
T ss_pred             ----CCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHH
Confidence                4557777777665421   122345799999999999999999999999999999999999999987655443333


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      +......                                                 .+..+++.+.+||.+||+.||++|
T Consensus       207 ~~~~~~~-------------------------------------------------~p~~~~~~~~~li~~~L~~dP~~R  237 (323)
T cd05571         207 ILMEEIR-------------------------------------------------FPRTLSPEAKSLLAGLLKKDPKQR  237 (323)
T ss_pred             HHcCCCC-------------------------------------------------CCCCCCHHHHHHHHHHccCCHHHc
Confidence            2111000                                                 112356678999999999999999


Q ss_pred             C-----CHHHHhcCCCCCCCcc
Q 047395          413 L-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       413 ~-----ta~elL~hp~f~~~~~  429 (432)
                      |     ++.++++||||.+..+
T Consensus       238 ~~~~~~~~~~ll~h~~f~~~~~  259 (323)
T cd05571         238 LGGGPEDAKEIMEHRFFASINW  259 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCCCCH
Confidence            9     8999999999987544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.7e-48  Score=377.83  Aligned_cols=278  Identities=21%  Similarity=0.366  Sum_probs=213.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      ..+|++++.||+|+||.||+|++..+++.||+|....     ..+.+|+++++.++|     +||+++++++......|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~H-----pnIv~~~~~~~~~~~~~l  160 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAINH-----PSIIQLKGTFTYNKFTCL  160 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCCC-----CCCCCEeEEEEECCeeEE
Confidence            3679999999999999999999999999999997532     346789999999987     999999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          174 VFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       174 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.                     
T Consensus       161 v~e~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~---------------------  217 (391)
T PHA03212        161 ILPRYKTDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINH---------------------  217 (391)
T ss_pred             EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcC---------------------
Confidence            99999899999987754  6899999999999999999999999999999999999654                     


Q ss_pred             cccCCCCCCeEEeecCCcccccC----CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC----
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQ----EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE----  325 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~----  325 (432)
                            .+.++|+|||++.....    .....+||+.|+|||++.+..++.++|||||||++|||++|..||....    
T Consensus       218 ------~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~  291 (391)
T PHA03212        218 ------PGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDG  291 (391)
T ss_pred             ------CCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccc
Confidence                  45577777777654221    1223579999999999999899999999999999999999998875432    


Q ss_pred             ---cHHHHHHHHHHhCCCCHHHHHhcCCcchhhh-c--cCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          326 ---NLEHLAMMERVLGPIPQHMLKRVDKPAEKFV-R--RGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       326 ---~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                         ....+..+....+..|..+............ .  ......+....                 ........+.++.+
T Consensus       292 ~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~  354 (391)
T PHA03212        292 DCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRP-----------------LWTNLYELPIDLEY  354 (391)
T ss_pred             cCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCC-----------------CHHHHhhhhhhHHH
Confidence               3445666667677665432111100000000 0  00000000000                 00111234567899


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||.+||++||++||||+|+|+||||+..
T Consensus       355 Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        355 LICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             HHHHHhcCChhhCCCHHHHhcChhhccC
Confidence            9999999999999999999999999874

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.2e-47  Score=370.73  Aligned_cols=300  Identities=27%  Similarity=0.481  Sum_probs=226.2

Q ss_pred             CceeecCc---eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCc
Q 047395           84 HYLFALGE---NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSR  157 (432)
Q Consensus        84 ~~~~~~~~---~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~  157 (432)
                      .|.+..++   .+.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.++..+.|     +|
T Consensus         7 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~n   81 (359)
T cd07876           7 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH-----KN   81 (359)
T ss_pred             cceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCC-----CC
Confidence            44445555   4568999999999999999999999999999999998642   2334567789999988877     99


Q ss_pred             eeEeecccccC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEee
Q 047395          158 CVQIRNWFDYR------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFV  231 (432)
Q Consensus       158 iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  231 (432)
                      |+++++++...      ..+|+||||++++|.+.+..    .+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus        82 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~  157 (359)
T cd07876          82 IISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  157 (359)
T ss_pred             EeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC
Confidence            99999988644      35799999998888888753    488999999999999999999999999999999999965


Q ss_pred             cCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHH
Q 047395          232 SPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC  309 (432)
Q Consensus       232 ~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv  309 (432)
                      .                           ++.+||+|||++......  .....||+.|+|||++.+..++.++|||||||
T Consensus       158 ~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~  210 (359)
T cd07876         158 S---------------------------DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC  210 (359)
T ss_pred             C---------------------------CCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHH
Confidence            4                           455677777766543221  23357899999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhh
Q 047395          310 ILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH  389 (432)
Q Consensus       310 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (432)
                      ++|+|++|..||.+.+..+.+..+.+..+.++..+..........+..... .++.. ...+.+.... .    ......
T Consensus       211 il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-~----~~~~~~  283 (359)
T cd07876         211 IMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRP-QYPGI-SFEELFPDWI-F----PSESER  283 (359)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCC-CCCCc-chhhhccccc-c----cccccc
Confidence            999999999999998888888888888887777665554433332222111 11100 0000000000 0    000011


Q ss_pred             cccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       390 ~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ....+..+++||.+||+.||++|||+.|+|+||||+.
T Consensus       284 ~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         284 DKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             ccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence            1234567899999999999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=8.4e-48  Score=372.30  Aligned_cols=282  Identities=22%  Similarity=0.310  Sum_probs=211.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++++.||+|+||+||+|++..+++.||||+++...    .....+..|+.++..+.|     ++|+++++.+.+...
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~-----~~iv~~~~~~~~~~~   75 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS-----LWVVKMFYSFQDKLN   75 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCC-----CCcceEEEEEecCCe
Confidence            46999999999999999999999999999999997532    223456778888888866     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ |++|.+++.+..  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~  153 (363)
T cd05628          76 LYLIMEFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK  153 (363)
T ss_pred             EEEEEcCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence            99999999 999999998764  699999999999999999999999999999999999999888888888888754321


Q ss_pred             CccccccCCCCCCeEEeecCCccc------------ccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAY------------EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg  317 (432)
                      ...... ..........|+.....            ........+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus       154 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G  232 (363)
T cd05628         154 AHRTEF-YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG  232 (363)
T ss_pred             cccccc-cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence            100000 00000000111111100            00011235799999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ..||.+.+..+....+......+                     .+|.                        ...+++.+
T Consensus       233 ~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~p~------------------------~~~~s~~~  267 (363)
T cd05628         233 YPPFCSETPQETYKKVMNWKETL---------------------IFPP------------------------EVPISEKA  267 (363)
T ss_pred             CCCCCCCCHHHHHHHHHcCcCcc---------------------cCCC------------------------cCCCCHHH
Confidence            99998877665554443221110                     0000                        01345668


Q ss_pred             HHHHHHccccCCC---CCCCHHHHhcCCCCCCCccC
Q 047395          398 IDLLQGLLRYDPS---SRLTAHDALKHPFFTRDYYR  430 (432)
Q Consensus       398 ~~li~~~L~~dP~---~R~ta~elL~hp~f~~~~~~  430 (432)
                      .+||.+|+. +|.   .||+++|+++||||++..++
T Consensus       268 ~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~~~  302 (363)
T cd05628         268 KDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVDWE  302 (363)
T ss_pred             HHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCCHH
Confidence            899999775 444   45899999999999886553

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-48  Score=370.60  Aligned_cols=260  Identities=28%  Similarity=0.415  Sum_probs=214.5

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||.||+|++..+++.||||+++...    .....+..|+.++..+.|     +||+++++++...+.
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h-----~~iv~~~~~~~~~~~   75 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS-----EWLVKLLYAFQDDEY   75 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC-----CCCccEEEEEEcCCE
Confidence            46999999999999999999999999999999997542    233456778888888876     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++                  
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~------------------  135 (333)
T cd05600          76 LYLAMEYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID------------------  135 (333)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC------------------
Confidence            99999999 999999998754  689999999999999999999999999999999999964                  


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                               .++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|..||...+..+.
T Consensus       136 ---------~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~  206 (333)
T cd05600         136 ---------ASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET  206 (333)
T ss_pred             ---------CCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH
Confidence                     45568888888877655555567899999999999999999999999999999999999999988776655


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+........                     .|...                    .....+++++.+||.+||..+|
T Consensus       207 ~~~i~~~~~~~~---------------------~~~~~--------------------~~~~~~s~~~~~li~~~l~~~~  245 (333)
T cd05600         207 WENLKYWKETLQ---------------------RPVYD--------------------DPRFNLSDEAWDLITKLINDPS  245 (333)
T ss_pred             HHHHHhcccccc---------------------CCCCC--------------------ccccccCHHHHHHHHHHhhChh
Confidence            544432211000                     00000                    0002456778999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCcc
Q 047395          410 SSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       410 ~~R~ta~elL~hp~f~~~~~  429 (432)
                      .+|||++++++||||.+..+
T Consensus       246 ~rr~s~~~ll~h~~~~~~~~  265 (333)
T cd05600         246 RRFGSLEDIKNHPFFKEVDW  265 (333)
T ss_pred             hhcCCHHHHHhCcccCCCCH
Confidence            99999999999999987543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.1e-49  Score=357.52  Aligned_cols=254  Identities=29%  Similarity=0.485  Sum_probs=219.7

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .++..||++.+.||+|.||+|-+|++...|+.||||.+++.+    ...-.+.+||+++..|.|     |||+.++++|+
T Consensus        49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNH-----PhII~IyEVFE  123 (668)
T KOG0611|consen   49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNH-----PHIIQIYEVFE  123 (668)
T ss_pred             cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCC-----Cceeehhhhhc
Confidence            456679999999999999999999999999999999997543    233467899999999998     99999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      +.+.+.|||||. +|.|+||+...+  .+++.+++.+++||..|+.|+|.++++|||||.+|||                
T Consensus       124 NkdKIvivMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENIL----------------  185 (668)
T KOG0611|consen  124 NKDKIVIVMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENIL----------------  185 (668)
T ss_pred             CCceEEEEEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhhee----------------
Confidence            999999999999 999999999876  7999999999999999999999999999999999999                


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhCCCCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                 ++.++.+||+|||++-.....  ..++||++-|.+||++.|.+| ++.+|-|||||+||.|+.|..||+
T Consensus       186 -----------LD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFD  254 (668)
T KOG0611|consen  186 -----------LDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFD  254 (668)
T ss_pred             -----------ecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccC
Confidence                       556677888888877654433  467899999999999999988 588999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.+......+|.+....-|                                                  ..+..+.-||+
T Consensus       255 G~Dhk~lvrQIs~GaYrEP--------------------------------------------------~~PSdA~gLIR  284 (668)
T KOG0611|consen  255 GRDHKRLVRQISRGAYREP--------------------------------------------------ETPSDASGLIR  284 (668)
T ss_pred             CchHHHHHHHhhcccccCC--------------------------------------------------CCCchHHHHHH
Confidence            9888777776655432221                                                  12233678999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .||..||++|.|++++-+|-|++=.|
T Consensus       285 wmLmVNP~RRATieDiAsHWWvNwgy  310 (668)
T KOG0611|consen  285 WMLMVNPERRATIEDIASHWWVNWGY  310 (668)
T ss_pred             HHHhcCcccchhHHHHhhhheeeccc
Confidence            99999999999999999999986443

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.3e-47  Score=368.47  Aligned_cols=283  Identities=27%  Similarity=0.503  Sum_probs=222.1

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.++|++++.||.|+||+||+|.+..+++.||||++....   .....+.+|+.+++.++|     +||+++++++...
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~   86 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKH-----ENVIGLLDVFTPA   86 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCC-----Cchhhhhhhhccc
Confidence            34678999999999999999999999999999999986432   233456789999999877     9999999887533


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          169 ------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       169 ------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                            ...|+++|+++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.          
T Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~----------  153 (343)
T cd07878          87 TSIENFNEVYLVTNLMGADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE----------  153 (343)
T ss_pred             ccccccCcEEEEeecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC----------
Confidence                  457999999999999988653   5999999999999999999999999999999999999654          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                       ++.+||+|||++..........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus       154 -----------------~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf  216 (343)
T cd07878         154 -----------------DCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALF  216 (343)
T ss_pred             -----------------CCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCC
Confidence                             455777777777665555555678999999999987 46889999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+..+.+..+....+..+......+...............+.                  ..........++.+.+||
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~li  278 (343)
T cd07878         217 PGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQ------------------QDLKKIFRGANPLAIDLL  278 (343)
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccc------------------hhHHHhccCCCHHHHHHH
Confidence            98888888888888777776665544332211100000000000                  000111223456688999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .+||+.||.+|||+.|+|+||||.+.
T Consensus       279 ~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         279 EKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             HHHcCCChhhCCCHHHHhcCcchhcc
Confidence            99999999999999999999999863

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.2e-47  Score=365.63  Aligned_cols=252  Identities=24%  Similarity=0.376  Sum_probs=205.9

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      +|++++.||+|+||.||+|++..+++.||||+++...    ...+.+..|+.++..+.|    +++|+.+++++...+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~----~~~i~~~~~~~~~~~~~   76 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK----PPFLTQLHSCFQTMDRL   76 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCC----CCceeeeEEEEEcCCEE
Confidence            4899999999999999999999999999999997532    233456677777777655    36788999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.                  
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~------------------  136 (324)
T cd05587          77 YFVMEYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA------------------  136 (324)
T ss_pred             EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC------------------
Confidence            9999999 999999998754  6899999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                               ++.++|+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..
T Consensus       137 ---------~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~  207 (324)
T cd05587         137 ---------EGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED  207 (324)
T ss_pred             ---------CCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence                     445677777765432   12223457899999999999999999999999999999999999999887765


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+.......                                                 +..++..+.+||.+||..
T Consensus       208 ~~~~~i~~~~~~~-------------------------------------------------~~~~~~~~~~li~~~l~~  238 (324)
T cd05587         208 ELFQSIMEHNVSY-------------------------------------------------PKSLSKEAVSICKGLLTK  238 (324)
T ss_pred             HHHHHHHcCCCCC-------------------------------------------------CCCCCHHHHHHHHHHhhc
Confidence            5554443221111                                                 123455688999999999


Q ss_pred             CCCCCCCH-----HHHhcCCCCCCCcc
Q 047395          408 DPSSRLTA-----HDALKHPFFTRDYY  429 (432)
Q Consensus       408 dP~~R~ta-----~elL~hp~f~~~~~  429 (432)
                      ||.+|+++     +++++||||....+
T Consensus       239 ~P~~R~~~~~~~~~~~~~hp~~~~~~~  265 (324)
T cd05587         239 HPAKRLGCGPTGERDIREHAFFRRIDW  265 (324)
T ss_pred             CHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            99999976     89999999987654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=3.6e-47  Score=367.02  Aligned_cols=301  Identities=27%  Similarity=0.455  Sum_probs=226.9

Q ss_pred             ceeecCc---eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCce
Q 047395           85 YLFALGE---NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRC  158 (432)
Q Consensus        85 ~~~~~~~---~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i  158 (432)
                      |.+..|+   .+.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.++|     +||
T Consensus         4 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~ni   78 (355)
T cd07874           4 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-----KNI   78 (355)
T ss_pred             eeeccCchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCC-----Cch
Confidence            4555555   3568999999999999999999999999999999998642   2334567789999998887     999


Q ss_pred             eEeecccccC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec
Q 047395          159 VQIRNWFDYR------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       159 v~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  232 (432)
                      +++++++...      ...|+||||+.++|.+.+..    .+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus        79 v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~  154 (355)
T cd07874          79 ISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS  154 (355)
T ss_pred             hceeeeeeccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECC
Confidence            9999987543      35799999998888888754    4889999999999999999999999999999999999654


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHH
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI  310 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvi  310 (432)
                                                 ++.+||+|||++......  .....||+.|+|||++.+..++.++|||||||+
T Consensus       155 ---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~i  207 (355)
T cd07874         155 ---------------------------DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI  207 (355)
T ss_pred             ---------------------------CCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHH
Confidence                                       455777777776654332  233578999999999999899999999999999


Q ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhc
Q 047395          311 LIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV  390 (432)
Q Consensus       311 l~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (432)
                      +|+|++|+.||.+.+..+....+....+.....+..........+..... .+.... ......     ...........
T Consensus       208 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~-----~~~~~~~~~~~  280 (355)
T cd07874         208 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRP-KYAGLT-FPKLFP-----DSLFPADSEHN  280 (355)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCC-cccccc-chhhcc-----ccccccccccc
Confidence            99999999999998888877777777777666665554443333322211 000000 000000     00000001112


Q ss_pred             ccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       391 ~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ...+..+++||.+||+.||++|||+.|+|+||||+..+
T Consensus       281 ~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~  318 (355)
T cd07874         281 KLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWY  318 (355)
T ss_pred             cccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence            23456789999999999999999999999999997543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-50  Score=368.10  Aligned_cols=250  Identities=28%  Similarity=0.429  Sum_probs=210.7

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ..|...+.||+|.||.||+|.+..+++.||+|++.-.  ....+.+.+|+.+|..+++     +||.++++.|..+..++
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~-----~~it~yygsyl~g~~Lw   87 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDS-----PNITEYYGSYLKGTKLW   87 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCc-----chHHhhhhheeecccHH
Confidence            4688889999999999999999999999999999743  3445688899999999988     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      ++|||| ||++.+.++...  .+.+..+..++++++.||.|||.++.+|||||+.|||+...                  
T Consensus        88 iiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~------------------  147 (467)
T KOG0201|consen   88 IIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES------------------  147 (467)
T ss_pred             HHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhcceecccccccceeEecc------------------
Confidence            999999 999999998765  45899999999999999999999999999999999997543                  


Q ss_pred             cccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                               +.+||+|||.+.....   ...+++||+.|||||++.+..|+.++||||||++.+||++|.+|+.....+.
T Consensus       148 ---------g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr  218 (467)
T KOG0201|consen  148 ---------GDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR  218 (467)
T ss_pred             ---------CcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce
Confidence                     5677777776655332   2356899999999999999899999999999999999999999998765532


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .+..|       |                       ...                  .+.....+++.+++|+..||..|
T Consensus       219 vlflI-------p-----------------------k~~------------------PP~L~~~~S~~~kEFV~~CL~k~  250 (467)
T KOG0201|consen  219 VLFLI-------P-----------------------KSA------------------PPRLDGDFSPPFKEFVEACLDKN  250 (467)
T ss_pred             EEEec-------c-----------------------CCC------------------CCccccccCHHHHHHHHHHhhcC
Confidence            22111       1                       000                  01112356777999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~  426 (432)
                      |+.||||.++|+|+|++.
T Consensus       251 P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  251 PEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             cccCcCHHHHhhhHHHHh
Confidence            999999999999999987

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=4e-47  Score=359.74  Aligned_cols=282  Identities=28%  Similarity=0.465  Sum_probs=223.3

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++.++||+|+||.||+|++..+++.||+|.++...  .....+.+|+.+++.++|     +||+++++++..++..|
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~~   80 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKH-----ANIVTLHDIVHTDKSLT   80 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCC-----CCcceEEEEEeeCCeEE
Confidence            57999999999999999999999999999999987432  223456789999998877     99999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.                    
T Consensus        81 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~--------------------  139 (309)
T cd07872          81 LVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINE--------------------  139 (309)
T ss_pred             EEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--------------------
Confidence            999999889999987654 35899999999999999999999999999999999999654                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                             .+.++|+|||++......   .....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+
T Consensus       140 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~  212 (309)
T cd07872         140 -------RGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED  212 (309)
T ss_pred             -------CCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                   445666777766543221   1234678999999998764 57899999999999999999999999988888


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.+..+.++...+............    ..+....               .........++.++.+||.+||+.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------------~~~~~~~~~~~~~~~~li~~~L~~d  273 (309)
T cd07872         213 ELHLIFRLLGTPTEETWPGISSNDEFKNY----NFPKYKP---------------QPLINHAPRLDTEGIELLTKFLQYE  273 (309)
T ss_pred             HHHHHHHHhCCCCHHHHhhhcchhhhhhh----hcCccCC---------------CchhhhccCCCHHHHHHHHHhccCC
Confidence            88888888888777666554332111000    0000000               0001122356778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCc
Q 047395          409 PSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~  428 (432)
                      |.+|||+.|+|+||||+...
T Consensus       274 p~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         274 SKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             hhhCCCHHHHhcChhhhhcc
Confidence            99999999999999998643

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-47  Score=371.99  Aligned_cols=282  Identities=24%  Similarity=0.397  Sum_probs=213.7

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||+||+|++..+++.||||+++...    .....+.+|+.++..+.|     +||+++++++..++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-----~~iv~~~~~~~~~~~   75 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN-----PWVVKLYYSFQDENY   75 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-----CCCcceEEEEEcCCe
Confidence            46999999999999999999999999999999997532    233456789999988876     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++++|||++.....
T Consensus        76 ~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  153 (364)
T cd05599          76 LYLIMEYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK  153 (364)
T ss_pred             EEEEECCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence            99999999 999999998754  699999999999999999999999999999999999999988888888888754322


Q ss_pred             Cccc--cccCCCCCCeEEeecCCccccc------------CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHH
Q 047395          250 DVNY--YKRLPKSSAIKVIDFGSTAYEH------------QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       250 ~~~~--~~~~~~~~~~kl~Dfg~a~~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ell  315 (432)
                      ....  ..........-..++.......            ......+||+.|+|||++.+..++.++|||||||++|||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~  233 (364)
T cd05599         154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML  233 (364)
T ss_pred             cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence            1100  0000000000001111000000            0112347999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchH
Q 047395          316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG  395 (432)
Q Consensus       316 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (432)
                      +|..||...+..+....+......+                     ..|                        ....+++
T Consensus       234 ~G~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~~------------------------~~~~~s~  268 (364)
T cd05599         234 VGYPPFCSDNPQETYRKIINWKETL---------------------QFP------------------------DEVPLSP  268 (364)
T ss_pred             cCCCCCCCCCHHHHHHHHHcCCCcc---------------------CCC------------------------CCCCCCH
Confidence            9999998776655443332211000                     000                        0113466


Q ss_pred             HHHHHHHHccccCCCCCCC---HHHHhcCCCCCCCcc
Q 047395          396 YLIDLLQGLLRYDPSSRLT---AHDALKHPFFTRDYY  429 (432)
Q Consensus       396 ~l~~li~~~L~~dP~~R~t---a~elL~hp~f~~~~~  429 (432)
                      .+.+||.+||. +|.+|++   ++|+++||||+...+
T Consensus       269 ~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~~  304 (364)
T cd05599         269 EAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDW  304 (364)
T ss_pred             HHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCCH
Confidence            78899999997 9999998   999999999987543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=5.6e-47  Score=366.86  Aligned_cols=291  Identities=27%  Similarity=0.455  Sum_probs=223.5

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC-
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR-  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~-  168 (432)
                      +.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.+.|     +||+++++++... 
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~ii~~~~~~~~~~   96 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-----KNIIGLLNVFTPQK   96 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCC-----CCccccceeecccc
Confidence            468999999999999999999999999999999998642   2334567789988888877     9999999877543 


Q ss_pred             -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          169 -----NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       169 -----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                           ..+|+||||++++|.+.+..    .+++..+..++.||+.||.|||++||+||||||+|||++.           
T Consensus        97 ~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-----------  161 (364)
T cd07875          97 SLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-----------  161 (364)
T ss_pred             cccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECC-----------
Confidence                 46899999998899988854    4889999999999999999999999999999999999654           


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                      ++.+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus       162 ----------------~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf  225 (364)
T cd07875         162 ----------------DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF  225 (364)
T ss_pred             ----------------CCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCC
Confidence                            456777777777654332  23357899999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+..+....+....+.++..+.+........+...... +...  .   ...... ..............+..+++||
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~---~~~~~~-~~~~~~~~~~~~~~~~~~~dll  298 (364)
T cd07875         226 PGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK-YAGY--S---FEKLFP-DVLFPADSEHNKLKASQARDLL  298 (364)
T ss_pred             CCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCC-cCCC--C---hHhhCc-cccccccccccccccHHHHHHH
Confidence            9998888888888888877776666554443333221110 0000  0   000000 0000001111223456789999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      .+||+.||.+|||++|+|+||||..
T Consensus       299 ~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         299 SKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HHhcCcCcccCCCHHHHhcCccccc
Confidence            9999999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=6.2e-47  Score=354.73  Aligned_cols=278  Identities=30%  Similarity=0.501  Sum_probs=212.9

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-----
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-----  167 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-----  167 (432)
                      +|++.+.||+|+||+||+|++..+++.||+|.++...   .......+|+.+++.+.+.  .|+||+++++++..     
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~h~ni~~~~~~~~~~~~~~   78 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAF--DHPNIVRLMDVCATSRTDR   78 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhc--CCCCeeeeeeeeccccCCC
Confidence            5899999999999999999999999999999986432   1223456788888877643  35999999998753     


Q ss_pred             CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          168 RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       168 ~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      ...+++|||++.++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.+              
T Consensus        79 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~--------------  144 (288)
T cd07863          79 ETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG--------------  144 (288)
T ss_pred             CceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--------------
Confidence            356899999998899999987654569999999999999999999999999999999999996544              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                   +.+||+|||++......  .....||..|+|||++.+..++.++|||||||++|+|++|.+||.+..
T Consensus       145 -------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~  211 (288)
T cd07863         145 -------------GQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS  211 (288)
T ss_pred             -------------CCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC
Confidence                         45666666666543322  223468999999999999899999999999999999999999999888


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+.+..+....+......+.........       .+..               ..........+.++..+.+||.+||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---------------~~~~~~~~~~~~~~~~~~~li~~~L  269 (288)
T cd07863         212 EADQLGKIFDLIGLPPEDDWPRDVTLPRG-------AFSP---------------RGPRPVQSVVPEIEESGAQLLLEML  269 (288)
T ss_pred             HHHHHHHHHHHhCCCChhhCccccccccc-------ccCC---------------CCCCchHHhCcCcCHHHHHHHHHHh
Confidence            87777777776655443222111000000       0000               0000011222356677899999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f  424 (432)
                      +.||++|||+.|+++||||
T Consensus       270 ~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         270 TFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             ccCcccCCCHHHHhcCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.7e-47  Score=371.08  Aligned_cols=282  Identities=25%  Similarity=0.385  Sum_probs=210.9

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .|++++.||+|+||+||+|++..+++.||||+++...    .....+.+|+.++..+.|     +||+++++++.+.+.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h-----~~iv~l~~~~~~~~~~   76 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN-----EWVVKLYYSFQDKDNL   76 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC-----CCeeeeEEEEecCCEE
Confidence            6899999999999999999999999999999997532    233467789999988877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++|||++......
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~  154 (381)
T cd05626          77 YFVMDYIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT  154 (381)
T ss_pred             EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence            9999999 999999998764  6899999999999999999999999999999999999999999999999986432111


Q ss_pred             cc--cccc---C--CC-C-----CCeEEeecCCc-------cc---ccCCccccccCCCcchhHHHhCCCCCccchHHHH
Q 047395          251 VN--YYKR---L--PK-S-----SAIKVIDFGST-------AY---EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSV  307 (432)
Q Consensus       251 ~~--~~~~---~--~~-~-----~~~kl~Dfg~a-------~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSl  307 (432)
                      ..  ....   .  .. .     .....+.++..       ..   ........+||+.|+|||++.+..++.++|||||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl  234 (381)
T cd05626         155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV  234 (381)
T ss_pred             cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence            00  0000   0  00 0     00000111100       00   0001134579999999999999899999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhh
Q 047395          308 GCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM  387 (432)
Q Consensus       308 Gvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (432)
                      ||++|||++|..||...+..+....+.......                     .+|                       
T Consensus       235 G~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~~-----------------------  270 (381)
T cd05626         235 GVILFEMLVGQPPFLAPTPTETQLKVINWENTL---------------------HIP-----------------------  270 (381)
T ss_pred             hhHHHHHHhCCCCCcCCCHHHHHHHHHcccccc---------------------CCC-----------------------
Confidence            999999999999998766544433332111000                     000                       


Q ss_pred             hhcccchHHHHHHHHHccc--cCCCCCCCHHHHhcCCCCCCCcc
Q 047395          388 QHVDHSAGYLIDLLQGLLR--YDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       388 ~~~~~~~~~l~~li~~~L~--~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                       ....+++++.+||.+||.  .+|..|++++|+++||||++..+
T Consensus       271 -~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~  313 (381)
T cd05626         271 -PQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVDF  313 (381)
T ss_pred             -CCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCCh
Confidence             012356778999999664  45556999999999999987543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=3.3e-47  Score=369.45  Aligned_cols=281  Identities=27%  Similarity=0.483  Sum_probs=219.9

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC---
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN---  169 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~---  169 (432)
                      +|++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.++..++|     +||+++++++...+   
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~~~~~   75 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKH-----DNVLSALDILQPPHIDP   75 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCC-----CCcCCHhheecCCCccc
Confidence            478899999999999999999999999999998642   2233567789999998877     99999999988766   


Q ss_pred             --eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          170 --HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       170 --~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                        ..|+||||++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.+              
T Consensus        76 ~~~~~lv~e~~~~~l~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~--------------  139 (372)
T cd07853          76 FEEIYVVTELMQSDLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN--------------  139 (372)
T ss_pred             cceEEEEeeccccCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCC--------------
Confidence              899999999889999887654  69999999999999999999999999999999999997654              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                   +.+||+|||++......    .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus       140 -------------~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  206 (372)
T cd07853         140 -------------CVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQ  206 (372)
T ss_pred             -------------CCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCC
Confidence                         45666666655432211    1234678999999999875 47899999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.+..+.+..+.+.++..+...+..........+.......+                . ...........++.+.+||.
T Consensus       207 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-~~~~~~~~~~~~~~~~~li~  269 (372)
T cd07853         207 AQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPP----------------S-LPVLYTLSSQATHEAVHLLC  269 (372)
T ss_pred             CCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCC----------------c-hHHhcccCCCCCHHHHHHHH
Confidence            999999999999988877765444332222221111111000                0 00011122345777999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +||+.||++|||+.|+|+||||.+.
T Consensus       270 ~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         270 RMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             HhCCCChhhCcCHHHHhcCHhhCCC
Confidence            9999999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-47  Score=362.17  Aligned_cols=243  Identities=29%  Similarity=0.469  Sum_probs=200.5

Q ss_pred             eecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          103 IGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       103 lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      ||+|+||.||+|++..+++.||+|+++...    .....+.+|+.++..+.|     +||+++++++...+..|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~~lv~e~~   75 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNC-----PFIVPLKFSFQSPEKLYLVLAFI   75 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-----CcEeceeeEEecCCeEEEEEcCC
Confidence            799999999999999999999999997432    233456778888888876     99999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccC
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL  257 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  257 (432)
                       +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.                         
T Consensus        76 ~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~-------------------------  128 (312)
T cd05585          76 NGGELFHHLQREG--RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDY-------------------------  128 (312)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECC-------------------------
Confidence             999999998754  6999999999999999999999999999999999999654                         


Q ss_pred             CCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 047395          258 PKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME  334 (432)
Q Consensus       258 ~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~  334 (432)
                        ++.++|+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.
T Consensus       129 --~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~  206 (312)
T cd05585         129 --QGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL  206 (312)
T ss_pred             --CCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHH
Confidence              45677777777654221   2234579999999999999999999999999999999999999998766544433322


Q ss_pred             HHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCC-
Q 047395          335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRL-  413 (432)
Q Consensus       335 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-  413 (432)
                      ....                       .                          .+..+++.+.+||.+||+.||.+|| 
T Consensus       207 ~~~~-----------------------~--------------------------~~~~~~~~~~~li~~~L~~dp~~R~~  237 (312)
T cd05585         207 QEPL-----------------------R--------------------------FPDGFDRDAKDLLIGLLSRDPTRRLG  237 (312)
T ss_pred             cCCC-----------------------C--------------------------CCCcCCHHHHHHHHHHcCCCHHHcCC
Confidence            1100                       0                          1124556688999999999999997 


Q ss_pred             --CHHHHhcCCCCCCCc
Q 047395          414 --TAHDALKHPFFTRDY  428 (432)
Q Consensus       414 --ta~elL~hp~f~~~~  428 (432)
                        ++.|+|+||||.+..
T Consensus       238 ~~~~~e~l~hp~~~~~~  254 (312)
T cd05585         238 YNGAQEIKNHPFFSQLS  254 (312)
T ss_pred             CCCHHHHHcCCCcCCCC
Confidence              589999999998754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-48  Score=341.29  Aligned_cols=264  Identities=28%  Similarity=0.497  Sum_probs=217.9

Q ss_pred             eecCceEEE-eeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc---
Q 047395           92 NLTSRYKIL-RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY---  167 (432)
Q Consensus        92 ~~~~~y~i~-~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~---  167 (432)
                      .++++|.+- ++||-|-.|.|-.|.++.|++.+|+|++....    ...+|+++.-...    .|+|||.++++|++   
T Consensus        58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~----KARrEVeLHw~~s----~h~~iV~IidVyeNs~~  129 (400)
T KOG0604|consen   58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP----KARREVELHWMAS----GHPHIVSIIDVYENSYQ  129 (400)
T ss_pred             cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH----HHHhHhhhhhhhc----CCCceEEeehhhhhhcc
Confidence            467788886 58999999999999999999999999986433    3556776544433    46999999999874   


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          168 -RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       168 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                       ...+.+|||.+ ||.|++.+..++...+++.++..|++||..|+.|||+.+|.||||||+|+|+..             
T Consensus       130 ~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~-------------  196 (400)
T KOG0604|consen  130 GRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTT-------------  196 (400)
T ss_pred             CceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeec-------------
Confidence             36788999999 999999999998888999999999999999999999999999999999999876             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                 ...+..+||+|||+|+....  ...+.|-||.|.|||++...+|+..+|+||+||++|-|++|.+||..
T Consensus       197 -----------t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS  265 (400)
T KOG0604|consen  197 -----------TSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS  265 (400)
T ss_pred             -----------CCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccc
Confidence                       34677899999999988663  34557889999999999999999999999999999999999999986


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .....           ++..        ...-+..+...+|+                      +.++.+|..+.|+|++
T Consensus       266 ~hg~a-----------ispg--------Mk~rI~~gqy~FP~----------------------pEWs~VSe~aKdlIR~  304 (400)
T KOG0604|consen  266 NHGLA-----------ISPG--------MKRRIRTGQYEFPE----------------------PEWSCVSEAAKDLIRK  304 (400)
T ss_pred             cCCcc-----------CChh--------HHhHhhccCccCCC----------------------hhHhHHHHHHHHHHHH
Confidence            54321           1111        12223333334443                      2345678889999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +|..+|.+|+|++|+++|||+++..
T Consensus       305 LLkt~PteRlTI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  305 LLKTEPTERLTIEEVMDHPWINQYE  329 (400)
T ss_pred             HhcCCchhheeHHHhhcCchhcccc
Confidence            9999999999999999999998753

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-47  Score=372.32  Aligned_cols=279  Identities=25%  Similarity=0.402  Sum_probs=211.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++++.||+|+||+||+|.+..+++.||||++....    .....+.+|++++..+.|     +||+++++++...++
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-----p~iv~~~~~~~~~~~   75 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS-----PWVVSLYYSFQDAQY   75 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCC-----CCcceEEEEEEcCCe
Confidence            46999999999999999999999999999999986532    223456778888888776     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++++|||++.....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~  153 (377)
T cd05629          76 LYLIMEFLPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK  153 (377)
T ss_pred             eEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence            99999999 999999998754  699999999999999999999999999999999999999999999999998753221


Q ss_pred             Ccc--ccccC----------CCCCC-------------eEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchH
Q 047395          250 DVN--YYKRL----------PKSSA-------------IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDM  304 (432)
Q Consensus       250 ~~~--~~~~~----------~~~~~-------------~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDi  304 (432)
                      ...  ...+.          +....             .++.+++.+...  .....+||+.|+|||++.+..++.++||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di  231 (377)
T cd05629         154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRL--MAYSTVGTPDYIAPEIFLQQGYGQECDW  231 (377)
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc--cccccCCCccccCHHHHccCCCCCceee
Confidence            100  00000          00000             001111110000  0113579999999999999899999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhh
Q 047395          305 WSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN  384 (432)
Q Consensus       305 wSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (432)
                      |||||++|||++|..||.+.+..+....+......                     ..+|.                   
T Consensus       232 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------------~~~p~-------------------  271 (377)
T cd05629         232 WSLGAIMFECLIGWPPFCSENSHETYRKIINWRET---------------------LYFPD-------------------  271 (377)
T ss_pred             EecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCc---------------------cCCCC-------------------
Confidence            99999999999999999877665544443221100                     00110                   


Q ss_pred             hhhhhcccchHHHHHHHHHccccCCCCC---CCHHHHhcCCCCCCCc
Q 047395          385 LVMQHVDHSAGYLIDLLQGLLRYDPSSR---LTAHDALKHPFFTRDY  428 (432)
Q Consensus       385 ~~~~~~~~~~~~l~~li~~~L~~dP~~R---~ta~elL~hp~f~~~~  428 (432)
                           ...++..+.+||.+||. +|.+|   +|+.|+++||||++..
T Consensus       272 -----~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~  312 (377)
T cd05629         272 -----DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVD  312 (377)
T ss_pred             -----CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence                 11345668899999998 77775   5999999999998654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=4.5e-47  Score=361.67  Aligned_cols=251  Identities=25%  Similarity=0.400  Sum_probs=203.6

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      |++++.||+|+||.||+|.+..+++.||||+++...    ...+.+.+|++++..+..  ..|+||+++++++...+..|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~--l~hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANS--ERHPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccc--cCCCChhceeeEEEcCCEEE
Confidence            788999999999999999999999999999997532    223456677777665543  24599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|..++...   .+++..++.++.||+.||.|||++||+||||||+|||++.+                  
T Consensus        79 lv~E~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~------------------  137 (324)
T cd05589          79 FVMEYAAGGDLMMHIHTD---VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTE------------------  137 (324)
T ss_pred             EEEcCCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCC------------------
Confidence            999999 99999888653   59999999999999999999999999999999999997654                  


Q ss_pred             cccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                               +.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       138 ---------~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~  208 (324)
T cd05589         138 ---------GFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE  208 (324)
T ss_pred             ---------CcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH
Confidence                     456666666554321   12234578999999999999899999999999999999999999998876655


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.......                                                 +..++..+.+||.+||+.|
T Consensus       209 ~~~~i~~~~~~~-------------------------------------------------p~~~~~~~~~li~~~L~~d  239 (324)
T cd05589         209 VFDSIVNDEVRY-------------------------------------------------PRFLSREAISIMRRLLRRN  239 (324)
T ss_pred             HHHHHHhCCCCC-------------------------------------------------CCCCCHHHHHHHHHHhhcC
Confidence            444332211111                                                 1234566889999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCCc
Q 047395          409 PSSRL-----TAHDALKHPFFTRDY  428 (432)
Q Consensus       409 P~~R~-----ta~elL~hp~f~~~~  428 (432)
                      |.+||     ++.++++||||++..
T Consensus       240 P~~R~~~~~~~~~~l~~~~~f~~~~  264 (324)
T cd05589         240 PERRLGSGEKDAEDVKKQPFFRDIN  264 (324)
T ss_pred             HhHcCCCCCCCHHHHhhCCCcCCCC
Confidence            99999     799999999998754

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=2.6e-47  Score=371.47  Aligned_cols=282  Identities=26%  Similarity=0.394  Sum_probs=213.0

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|+++++||+|+||+||+|++..+++.||+|++....    .....+.+|+.++..+.|     +||+++++.+...+.
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h-----~~iv~~~~~~~~~~~   75 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADN-----EWVVRLYYSFQDKDN   75 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCC-----CcCCeEEEEEEeCCE
Confidence            36999999999999999999999999999999997532    234567789999988877     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~  153 (382)
T cd05625          76 LYFVMDYIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  153 (382)
T ss_pred             EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccc
Confidence            99999999 899999998754  689999999999999999999999999999999999999999999999998653221


Q ss_pred             Cccc-cccCCCCCCeEEeecCC---------------------ccc-ccCCccccccCCCcchhHHHhCCCCCccchHHH
Q 047395          250 DVNY-YKRLPKSSAIKVIDFGS---------------------TAY-EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS  306 (432)
Q Consensus       250 ~~~~-~~~~~~~~~~kl~Dfg~---------------------a~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwS  306 (432)
                      .... .............+|..                     ... ........+||+.|+|||++.+..++.++||||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS  233 (382)
T cd05625         154 THDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS  233 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence            1000 00000000000001100                     000 000112357999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhh
Q 047395          307 VGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV  386 (432)
Q Consensus       307 lGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (432)
                      |||++|||++|..||.+.+..+....+.......                     ..|                      
T Consensus       234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~p----------------------  270 (382)
T cd05625         234 VGVILYEMLVGQPPFLAQTPLETQMKVINWQTSL---------------------HIP----------------------  270 (382)
T ss_pred             chHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCc---------------------CCC----------------------
Confidence            9999999999999998776554443332211100                     000                      


Q ss_pred             hhhcccchHHHHHHHHHccccCCCCCCC---HHHHhcCCCCCCCcc
Q 047395          387 MQHVDHSAGYLIDLLQGLLRYDPSSRLT---AHDALKHPFFTRDYY  429 (432)
Q Consensus       387 ~~~~~~~~~~l~~li~~~L~~dP~~R~t---a~elL~hp~f~~~~~  429 (432)
                        ....+++++.+||.+|+ .||.+|++   ++++++||||+...+
T Consensus       271 --~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~  313 (382)
T cd05625         271 --PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDF  313 (382)
T ss_pred             --CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcCh
Confidence              01235667889999986 59999997   999999999987543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-47  Score=369.31  Aligned_cols=282  Identities=27%  Similarity=0.419  Sum_probs=212.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||+||+|++..+++.||||+++...    .....+..|+.++..+.|     +||+++++++..++.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~~~~~   75 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS-----PWIVKLYYSFQDEEH   75 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCC-----CCccchhhheecCCe
Confidence            47999999999999999999999999999999997532    234567788888888876     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++++|||++.....
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  153 (350)
T cd05573          76 LYLVMEYMPGGDLMNLLIRKD--VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK  153 (350)
T ss_pred             EEEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence            99999999 999999998763  699999999999999999999999999999999999988877777777776654322


Q ss_pred             CccccccCCCCCC-eEEeec----CCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          250 DVNYYKRLPKSSA-IKVIDF----GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       250 ~~~~~~~~~~~~~-~kl~Df----g~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                      ............. ......    ..............||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~  233 (350)
T cd05573         154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD  233 (350)
T ss_pred             cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence            2100000000000 000000    00000001123357899999999999999999999999999999999999999887


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +.......+.......                     ..|                        ....+++.+.+||.+|
T Consensus       234 ~~~~~~~~i~~~~~~~---------------------~~p------------------------~~~~~~~~~~~li~~l  268 (350)
T cd05573         234 TLQETYNKIINWKESL---------------------RFP------------------------PDPPVSPEAIDLICRL  268 (350)
T ss_pred             CHHHHHHHHhccCCcc---------------------cCC------------------------CCCCCCHHHHHHHHHH
Confidence            7555444332211100                     000                        0112466789999999


Q ss_pred             cccCCCCCCC-HHHHhcCCCCCCCcc
Q 047395          405 LRYDPSSRLT-AHDALKHPFFTRDYY  429 (432)
Q Consensus       405 L~~dP~~R~t-a~elL~hp~f~~~~~  429 (432)
                      |. ||.+|++ ++++++||||++..+
T Consensus       269 l~-dp~~R~~s~~~ll~hp~~~~~~~  293 (350)
T cd05573         269 LC-DPEDRLGSFEEIKSHPFFKGIDW  293 (350)
T ss_pred             cc-ChhhcCCCHHHHhcCCCcCCCCH
Confidence            98 9999999 999999999987554

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=4.3e-47  Score=366.02  Aligned_cols=253  Identities=26%  Similarity=0.415  Sum_probs=197.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .++|+++++||+|+||.||+|++..+++.||||++...  ......+.+|++++..++|     +||+++++++...+.+
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~  147 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNH-----PNVVKCHDMFDHNGEI  147 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCC-----CCcceeeeEeccCCeE
Confidence            35688899999999999999999999999999998642  3345678899999999877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      ++||||+ +++|.+.      ...++..+..++.||+.||.|||++||+||||||+|||++.                  
T Consensus       148 ~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~------------------  203 (353)
T PLN00034        148 QVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINS------------------  203 (353)
T ss_pred             EEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC------------------
Confidence            9999999 8888643      23678888999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhC-----CCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                               ++.+||+|||++......   ....+||..|+|||++..     ...+.++|||||||++|||++|+.||.
T Consensus       204 ---------~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~  274 (353)
T PLN00034        204 ---------AKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG  274 (353)
T ss_pred             ---------CCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence                     445666666666543322   234578999999998843     224568999999999999999999997


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      .....+....+.......                                             .......++..+.+||.
T Consensus       275 ~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~l~~li~  309 (353)
T PLN00034        275 VGRQGDWASLMCAICMSQ---------------------------------------------PPEAPATASREFRHFIS  309 (353)
T ss_pred             CCCCccHHHHHHHHhccC---------------------------------------------CCCCCCccCHHHHHHHH
Confidence            433222211111110000                                             00011245667899999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      +||+.||++|||+.|+|+||||.+...
T Consensus       310 ~~l~~~P~~Rpt~~ell~hp~~~~~~~  336 (353)
T PLN00034        310 CCLQREPAKRWSAMQLLQHPFILRAQP  336 (353)
T ss_pred             HHccCChhhCcCHHHHhcCcccccCCc
Confidence            999999999999999999999988743

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=5.5e-47  Score=360.89  Aligned_cols=252  Identities=25%  Similarity=0.373  Sum_probs=204.4

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      +|++.+.||+|+||.||+|++..+++.||||++++...    .......|..++..+.+    |++|+.+++++...+.+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~----~~~i~~~~~~~~~~~~~   76 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGK----PPFLTQLHSCFQTMDRL   76 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccC----CCeEeeEEEEEecCCEE
Confidence            48899999999999999999999999999999975322    22334556666655533    48999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.                  
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~------------------  136 (323)
T cd05616          77 YFVMEYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS------------------  136 (323)
T ss_pred             EEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECC------------------
Confidence            9999999 999999997754  6999999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                               ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..
T Consensus       137 ---------~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~  207 (323)
T cd05616         137 ---------EGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED  207 (323)
T ss_pred             ---------CCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH
Confidence                     4456667777665322   1223457899999999999999999999999999999999999999887766


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+.......|                                                 ...+..+.+||.+||+.
T Consensus       208 ~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~l~~  238 (323)
T cd05616         208 ELFQSIMEHNVAYP-------------------------------------------------KSMSKEAVAICKGLMTK  238 (323)
T ss_pred             HHHHHHHhCCCCCC-------------------------------------------------CcCCHHHHHHHHHHccc
Confidence            55544433211111                                                 23456688999999999


Q ss_pred             CCCCCCC-----HHHHhcCCCCCCCcc
Q 047395          408 DPSSRLT-----AHDALKHPFFTRDYY  429 (432)
Q Consensus       408 dP~~R~t-----a~elL~hp~f~~~~~  429 (432)
                      ||++|++     ..++++||||....+
T Consensus       239 ~p~~R~~~~~~~~~~i~~h~~~~~~~~  265 (323)
T cd05616         239 HPGKRLGCGPEGERDIKEHAFFRYIDW  265 (323)
T ss_pred             CHHhcCCCCCCCHHHHhcCCCcCCCCH
Confidence            9999997     489999999987554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=2.9e-48  Score=360.87  Aligned_cols=322  Identities=32%  Similarity=0.579  Sum_probs=260.0

Q ss_pred             CCCCCCceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCC-CCc
Q 047395           79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS-GSR  157 (432)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~-~~~  157 (432)
                      ++..|+|.+.+|+.+.++|.+....|+|-|++|.+|.+...|+.|||||++........-+.|+++|+.|...+.. ..+
T Consensus       416 dDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~H  495 (752)
T KOG0670|consen  416 DDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFH  495 (752)
T ss_pred             ccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhH
Confidence            3456899999999999999999999999999999999999999999999998887788889999999999876543 357


Q ss_pred             eeEeecccccCCeEEEEEccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcc
Q 047395          158 CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNY-RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYL  236 (432)
Q Consensus       158 iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  236 (432)
                      |++++..|...+|+|||+|.+..+|.++|++.+. ..|....++.++.|++.||..|-.+||+|.||||+||||+.    
T Consensus       496 clrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE----  571 (752)
T KOG0670|consen  496 CLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNE----  571 (752)
T ss_pred             HHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEecc----
Confidence            9999999999999999999999999999998653 35889999999999999999999999999999999999865    


Q ss_pred             ccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHH
Q 047395          237 KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       237 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ell  315 (432)
                                            ....+||||||.|...... .+.+.-+..|.|||++.|.+|+...|+||.||+||||.
T Consensus       572 ----------------------~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElY  629 (752)
T KOG0670|consen  572 ----------------------SKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELY  629 (752)
T ss_pred             ----------------------CcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEee
Confidence                                  4567999999998875543 34455677899999999999999999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHH-HHHH---hhcC-chhhhhhhh--
Q 047395          316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRE-SIKA---VLKL-PRLQNLVMQ--  388 (432)
Q Consensus       316 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~-~~~~~~~~~--  388 (432)
                      ||+..|.+.++.+++.....+.|++|..++....-..+-|.....+.+-+.....+ ....   .++. ..+...+..  
T Consensus       630 tGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q  709 (752)
T KOG0670|consen  630 TGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQ  709 (752)
T ss_pred             ccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccC
Confidence            99999999999999999999999999998887655444443333221111100000 0000   0000 011111111  


Q ss_pred             ----hcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          389 ----HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       389 ----~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                          .....-.++++||.+||..||++|+|..|+|+||||+.
T Consensus       710 ~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  710 RLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             CCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence                11123456899999999999999999999999999985

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=3.4e-47  Score=362.82  Aligned_cols=246  Identities=25%  Similarity=0.442  Sum_probs=201.1

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||.||+|++..+++.||+|+++...    .....+.+|+.+++.+.|     +||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~~~~~~~lv~E   75 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRH-----PFLTSLKYSFQTKDRLCFVME   75 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-----CCCcceEEEEEcCCEEEEEEe
Confidence            46999999999999999999999999997532    233456778888888876     999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.                       
T Consensus        76 y~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~-----------------------  130 (328)
T cd05593          76 YVNGGELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDK-----------------------  130 (328)
T ss_pred             CCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECC-----------------------
Confidence            99 999999987754  6999999999999999999999999999999999999654                       


Q ss_pred             cCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 047395          256 RLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM  332 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~  332 (432)
                          ++.+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....
T Consensus       131 ----~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~  206 (328)
T cd05593         131 ----DGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL  206 (328)
T ss_pred             ----CCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHH
Confidence                44567777776654221   12335799999999999998999999999999999999999999987655443332


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      +......                                                 .+..++..+.+||.+||+.||++|
T Consensus       207 ~~~~~~~-------------------------------------------------~p~~~~~~~~~li~~~L~~dP~~R  237 (328)
T cd05593         207 ILMEDIK-------------------------------------------------FPRTLSADAKSLLSGLLIKDPNKR  237 (328)
T ss_pred             hccCCcc-------------------------------------------------CCCCCCHHHHHHHHHHcCCCHHHc
Confidence            2111000                                                 112456668899999999999999


Q ss_pred             C-----CHHHHhcCCCCCCCcc
Q 047395          413 L-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       413 ~-----ta~elL~hp~f~~~~~  429 (432)
                      +     ++.|+++||||....+
T Consensus       238 ~~~~~~~~~~il~h~~~~~~~~  259 (328)
T cd05593         238 LGGGPDDAKEIMRHSFFTGVNW  259 (328)
T ss_pred             CCCCCCCHHHHhcCCCcCCCCH
Confidence            7     8999999999987543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2.4e-47  Score=371.07  Aligned_cols=280  Identities=24%  Similarity=0.368  Sum_probs=210.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++++.||+|+||.||+|++..+++.||||++....    .....+.+|+.++..+.|     +||+++++.+..++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h-----~~iv~~~~~~~~~~~   75 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADN-----EWVVKLYYSFQDKDN   75 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCC-----CCcceEEEEEEcCCE
Confidence            46999999999999999999999999999999986432    233557789999998877     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        76 ~~lv~E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~  153 (376)
T cd05598          76 LYFVMDYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  153 (376)
T ss_pred             EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence            99999999 999999998764  689999999999999999999999999999999999999888888888887642211


Q ss_pred             Cc--cccccCCCCCCeEE-------eecCC--------cc---cccCCccccccCCCcchhHHHhCCCCCccchHHHHHH
Q 047395          250 DV--NYYKRLPKSSAIKV-------IDFGS--------TA---YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC  309 (432)
Q Consensus       250 ~~--~~~~~~~~~~~~kl-------~Dfg~--------a~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv  309 (432)
                      ..  ..... ........       .+...        ..   .........+||+.|+|||++.+..++.++|||||||
T Consensus       154 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv  232 (376)
T cd05598         154 THDSKYYQK-GDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV  232 (376)
T ss_pred             ccccccccc-ccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccc
Confidence            00  00000 00000000       00000        00   0000112357999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhh
Q 047395          310 ILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH  389 (432)
Q Consensus       310 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (432)
                      ++|||++|+.||.+.+..+....+.......                     .                        ...
T Consensus       233 ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~---------------------~------------------------~~~  267 (376)
T cd05598         233 ILYEMLVGQPPFLADTPAETQLKVINWETTL---------------------H------------------------IPS  267 (376)
T ss_pred             eeeehhhCCCCCCCCCHHHHHHHHhccCccc---------------------c------------------------CCC
Confidence            9999999999998776554433322110000                     0                        001


Q ss_pred             cccchHHHHHHHHHccccCCCCCC---CHHHHhcCCCCCCCc
Q 047395          390 VDHSAGYLIDLLQGLLRYDPSSRL---TAHDALKHPFFTRDY  428 (432)
Q Consensus       390 ~~~~~~~l~~li~~~L~~dP~~R~---ta~elL~hp~f~~~~  428 (432)
                      ...++..+.+||.+|+ .+|.+|+   |+.|+++||||+...
T Consensus       268 ~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~  308 (376)
T cd05598         268 QAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGID  308 (376)
T ss_pred             CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCC
Confidence            1235666889999976 5999999   999999999998743

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=5.7e-47  Score=366.91  Aligned_cols=256  Identities=23%  Similarity=0.408  Sum_probs=207.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++.+.||+|+||.||+|++..+++.||+|+++...    .....+..|+.+++.+.|     +||+++++++..++
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h-----~~iv~~~~~~~~~~  116 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS-----EWIVQLHYAFQDDK  116 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC-----CCcceEEEEEecCC
Confidence            468999999999999999999999999999999997532    223346678888888876     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ +++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||++.                
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~----------------  177 (370)
T cd05596         117 YLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK----------------  177 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcC----------------
Confidence            999999999 99999999764   4899999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCC----CCCccchHHHHHHHHHHHHhCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGL----GWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~----~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                 ++.+||+|||++......    ....+||+.|+|||++.+.    .++.++|||||||++|||++|..|
T Consensus       178 -----------~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~P  246 (370)
T cd05596         178 -----------SGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP  246 (370)
T ss_pred             -----------CCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCC
Confidence                       456777777766543221    2345799999999999754    378899999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+.......+......                     ..+|.                        ...++..+.+|
T Consensus       247 f~~~~~~~~~~~i~~~~~~---------------------~~~~~------------------------~~~~s~~~~~l  281 (370)
T cd05596         247 FYADSLVGTYSKIMDHKNS---------------------LTFPD------------------------DIEISKQAKDL  281 (370)
T ss_pred             cCCCCHHHHHHHHHcCCCc---------------------CCCCC------------------------cCCCCHHHHHH
Confidence            9887665544443221110                     01111                        12356678999


Q ss_pred             HHHccccCCCC--CCCHHHHhcCCCCCCCcc
Q 047395          401 LQGLLRYDPSS--RLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       401 i~~~L~~dP~~--R~ta~elL~hp~f~~~~~  429 (432)
                      |.+||+.+|.+  |+|++|+++||||++..+
T Consensus       282 i~~~L~~~p~r~~R~s~~ell~h~~~~~~~~  312 (370)
T cd05596         282 ICAFLTDREVRLGRNGVDEIKSHPFFKNDQW  312 (370)
T ss_pred             HHHHccChhhccCCCCHHHHhcCcccCCCCh
Confidence            99999999998  999999999999987543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.3e-46  Score=359.38  Aligned_cols=298  Identities=22%  Similarity=0.302  Sum_probs=211.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .++|++++.||+|+||.||+|++..++..||+|+++..  ......+.+|++++..++|     +||+++++++..++.+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~   78 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS-----PYIVGFYGAFYSDGEI   78 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC-----CCCCeEEEEEEECCEE
Confidence            46899999999999999999999999999999998743  2345678899999999877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      ++||||+ +++|.+++....  .+++..+..++.|++.||.|||+. +|+||||||+|||++.++               
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~---------------  141 (331)
T cd06649          79 SICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG---------------  141 (331)
T ss_pred             EEEeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC---------------
Confidence            9999999 899999998754  689999999999999999999985 699999999999976544               


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                  .++|+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+
T Consensus       142 ------------~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~  209 (331)
T cd06649         142 ------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE  209 (331)
T ss_pred             ------------cEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                        466666665543322 2233578999999999999889999999999999999999999998766544


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCC-CCC--HHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEG-ATS--RESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+.+...................    .......... ...  ..........-............+++++++||.+||
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  285 (331)
T cd06649         210 LEAIFGRPVVDGEEGEPHSISPRP----RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCL  285 (331)
T ss_pred             HHHHhcccccccccCCccccCccc----ccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHc
Confidence            332221100000000000000000    0000000000 000  000000000000000000011245778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          406 RYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ++||++|||++|+++||||+....
T Consensus       286 ~~~P~~Rpt~~ell~h~~~~~~~~  309 (331)
T cd06649         286 IKNPAERADLKMLMNHTFIKRSEV  309 (331)
T ss_pred             cCCcccCCCHHHHhcChHHhhccc
Confidence            999999999999999999987543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=8.2e-47  Score=359.05  Aligned_cols=247  Identities=25%  Similarity=0.411  Sum_probs=200.5

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||+||+|++..+++.||||+++...    ........|..++..+.    .|+||+++++++...+.+|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~----~h~~iv~~~~~~~~~~~~~iv~E   76 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR----NHPFLTQLYCCFQTPDRLFFVME   76 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc----CCCchhceeeEEEcCCEEEEEEc
Confidence            46999999999999999999999999997532    22344566777776553    24999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.                       
T Consensus        77 y~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~-----------------------  131 (320)
T cd05590          77 FVNGGDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDH-----------------------  131 (320)
T ss_pred             CCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC-----------------------
Confidence            99 899999998764  6999999999999999999999999999999999999654                       


Q ss_pred             cCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 047395          256 RLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM  332 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~  332 (432)
                          ++.++|+|||++....   .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....
T Consensus       132 ----~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~  207 (320)
T cd05590         132 ----EGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA  207 (320)
T ss_pred             ----CCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence                4456677777655321   122345789999999999998999999999999999999999999988776555444


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      +.......                                                 +..++..+.+||.+||+.||++|
T Consensus       208 i~~~~~~~-------------------------------------------------~~~~~~~~~~li~~~L~~dP~~R  238 (320)
T cd05590         208 ILNDEVVY-------------------------------------------------PTWLSQDAVDILKAFMTKNPTMR  238 (320)
T ss_pred             HhcCCCCC-------------------------------------------------CCCCCHHHHHHHHHHcccCHHHC
Confidence            42211111                                                 12345668899999999999999


Q ss_pred             CCH------HHHhcCCCCCCCcc
Q 047395          413 LTA------HDALKHPFFTRDYY  429 (432)
Q Consensus       413 ~ta------~elL~hp~f~~~~~  429 (432)
                      +++      +++++||||+...+
T Consensus       239 ~~~~~~~~~~~~~~h~~f~~~~~  261 (320)
T cd05590         239 LGSLTLGGEEAILRHPFFKELDW  261 (320)
T ss_pred             CCCCCCCCHHHHHcCCCcCCCCH
Confidence            998      99999999987543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-47  Score=357.81  Aligned_cols=246  Identities=26%  Similarity=0.359  Sum_probs=200.7

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcE-EEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC-
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN-  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~-vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~-  169 (432)
                      ....+.+.||.|+||+||+|.++  |.. ||||++....   .....+.+|+.+|..++|     ||||++++++.... 
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~H-----pNIV~f~G~~~~~~~  113 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRH-----PNIVQFYGACTSPPG  113 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCC-----CCeeeEEEEEcCCCC
Confidence            34556677999999999999887  555 9999997533   225689999999999988     99999999999887 


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      .++|||||+ +|+|.+++.......++...+..++.||+.||.|||+++ ||||||||+|||++.++             
T Consensus       114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~-------------  180 (362)
T KOG0192|consen  114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG-------------  180 (362)
T ss_pred             ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC-------------
Confidence            799999999 999999998853457999999999999999999999999 99999999999965432             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHh--CCCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVIL--GLGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~--~~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                   .++||+|||+++....   ..+...||+.|||||++.  ...|+.|+||||||+++|||+||+.||.
T Consensus       181 -------------~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~  247 (362)
T KOG0192|consen  181 -------------KTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFE  247 (362)
T ss_pred             -------------CEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCC
Confidence                         2678888887766543   334468999999999999  5689999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ..........+..... .|                                              ..+..+++.+..||.
T Consensus       248 ~~~~~~~~~~v~~~~~-Rp----------------------------------------------~~p~~~~~~l~~l~~  280 (362)
T KOG0192|consen  248 DLAPVQVASAVVVGGL-RP----------------------------------------------PIPKECPPHLSSLME  280 (362)
T ss_pred             CCCHHHHHHHHHhcCC-CC----------------------------------------------CCCccCCHHHHHHHH
Confidence            8877443333322111 11                                              111235667889999


Q ss_pred             HccccCCCCCCCHHHHhc
Q 047395          403 GLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~  420 (432)
                      .||..||.+||+..+++.
T Consensus       281 ~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  281 RCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             HhCCCCCCcCCCHHHHHH
Confidence            999999999999988763

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=8.2e-47  Score=358.41  Aligned_cols=247  Identities=26%  Similarity=0.378  Sum_probs=197.8

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||.||+|++..+++.||||+++....    ..+....|..++..+.    .|+||+++++++..++.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~----~hp~i~~~~~~~~~~~~~~lv~e   76 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAW----EHPFLTHLFCTFQTKEHLFFVME   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhcc----CCCCccceeeEEEcCCEEEEEEc
Confidence            469999999999999999999999999975432    2233445555554432    35999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ |++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.                       
T Consensus        77 ~~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~-----------------------  131 (316)
T cd05592          77 YLNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDK-----------------------  131 (316)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECC-----------------------
Confidence            99 999999998754  6999999999999999999999999999999999999654                       


Q ss_pred             cCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 047395          256 RLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM  332 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~  332 (432)
                          ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....
T Consensus       132 ----~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~  207 (316)
T cd05592         132 ----DGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS  207 (316)
T ss_pred             ----CCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                4556777777665422   122345789999999999998999999999999999999999999988776554443


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      +.......                                                 +..++..+.+||.+||+.||++|
T Consensus       208 i~~~~~~~-------------------------------------------------~~~~~~~~~~ll~~~l~~~P~~R  238 (316)
T cd05592         208 ILNDRPHF-------------------------------------------------PRWISKEAKDCLSKLFERDPTKR  238 (316)
T ss_pred             HHcCCCCC-------------------------------------------------CCCCCHHHHHHHHHHccCCHHHc
Confidence            32211111                                                 12345568899999999999999


Q ss_pred             CCH-HHHhcCCCCCCCcc
Q 047395          413 LTA-HDALKHPFFTRDYY  429 (432)
Q Consensus       413 ~ta-~elL~hp~f~~~~~  429 (432)
                      |++ .++++||||....+
T Consensus       239 ~~~~~~l~~h~~~~~~~~  256 (316)
T cd05592         239 LGVDGDIRQHPFFRGIDW  256 (316)
T ss_pred             CCChHHHHcCcccCCCCH
Confidence            986 58889999987554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=5.4e-47  Score=360.77  Aligned_cols=246  Identities=24%  Similarity=0.422  Sum_probs=200.5

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||.||+|++..+|+.||+|+++...    .....+.+|+.+++.+.|     +||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~i~~~~~~~~~~~~~~lv~E   75 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-----PFLTALKYAFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC-----CCCcceeeEEecCCEEEEEEe
Confidence            46999999999999999999999999997532    223456678888888877     999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++                     
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~---------------------  132 (323)
T cd05595          76 YANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG---------------------  132 (323)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC---------------------
Confidence            99 999999987754  689999999999999999999999999999999999976544                     


Q ss_pred             cCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 047395          256 RLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM  332 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~  332 (432)
                            .+||+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......
T Consensus       133 ------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~  206 (323)
T cd05595         133 ------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL  206 (323)
T ss_pred             ------CEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                  456666665543211   12235689999999999998999999999999999999999999987665544433


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      +......                                                 .+..+++.+.+||.+||+.||.+|
T Consensus       207 ~~~~~~~-------------------------------------------------~p~~~~~~~~~li~~~L~~dP~~R  237 (323)
T cd05595         207 ILMEEIR-------------------------------------------------FPRTLSPEAKSLLAGLLKKDPKQR  237 (323)
T ss_pred             HhcCCCC-------------------------------------------------CCCCCCHHHHHHHHHHccCCHHHh
Confidence            3211110                                                 112456678899999999999999


Q ss_pred             C-----CHHHHhcCCCCCCCcc
Q 047395          413 L-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       413 ~-----ta~elL~hp~f~~~~~  429 (432)
                      +     ++.++++||||.+..+
T Consensus       238 ~~~~~~~~~~~l~h~~~~~~~~  259 (323)
T cd05595         238 LGGGPSDAKEVMEHRFFLSINW  259 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCCCCH
Confidence            8     8999999999987543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=1.6e-46  Score=356.40  Aligned_cols=247  Identities=26%  Similarity=0.410  Sum_probs=197.2

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||.||+|++..+++.||+|+++...    ........|..++..+.    .|++|+++++++...+++|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~----~~~~i~~~~~~~~~~~~~~lv~E   76 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAW----ENPFLTHLYCTFQTKEHLFFVME   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhcc----CCCCccCeeEEEEeCCEEEEEEC
Confidence            47999999999999999999999999997542    22334555666665432    34999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.+                      
T Consensus        77 ~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~----------------------  132 (316)
T cd05620          77 FLNGGDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD----------------------  132 (316)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC----------------------
Confidence            99 899999998754  68999999999999999999999999999999999997554                      


Q ss_pred             cCCCCCCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 047395          256 RLPKSSAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM  332 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~  332 (432)
                           +.++|+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....
T Consensus       133 -----~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~  207 (316)
T cd05620         133 -----GHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFES  207 (316)
T ss_pred             -----CCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                 45666666655431   1223345789999999999999999999999999999999999999987765544433


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      +.......                                                 +..++..+.+||.+||+.||++|
T Consensus       208 ~~~~~~~~-------------------------------------------------~~~~~~~~~~li~~~l~~dP~~R  238 (316)
T cd05620         208 IRVDTPHY-------------------------------------------------PRWITKESKDILEKLFERDPTRR  238 (316)
T ss_pred             HHhCCCCC-------------------------------------------------CCCCCHHHHHHHHHHccCCHHHc
Confidence            32111111                                                 11345568899999999999999


Q ss_pred             CCH-HHHhcCCCCCCCcc
Q 047395          413 LTA-HDALKHPFFTRDYY  429 (432)
Q Consensus       413 ~ta-~elL~hp~f~~~~~  429 (432)
                      +++ +++++||||....+
T Consensus       239 ~~~~~~~~~h~~f~~~~~  256 (316)
T cd05620         239 LGVVGNIRGHPFFKTINW  256 (316)
T ss_pred             CCChHHHHcCCCcCCCCH
Confidence            997 58999999987543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=9.9e-47  Score=364.86  Aligned_cols=256  Identities=23%  Similarity=0.419  Sum_probs=206.1

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ..++|++.+.||+|+||.||+|++..+++.||+|++.+..    .....+.+|+.++..+.|     +||+++++++..+
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~h-----p~iv~~~~~~~~~  115 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS-----PWVVQLFCAFQDD  115 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC-----CCEeeEEEEEEcC
Confidence            3578999999999999999999999999999999986432    223456778888888877     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ +++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.               
T Consensus       116 ~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~---------------  177 (370)
T cd05621         116 KYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK---------------  177 (370)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC---------------
Confidence            9999999999 99999999764   4899999999999999999999999999999999999654               


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCC----CCccchHHHHHHHHHHHHhCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlGvil~elltg~~  319 (432)
                                  .+.+||+|||++......    ....+||+.|+|||++.+..    ++.++|||||||++|+|++|..
T Consensus       178 ------------~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~  245 (370)
T cd05621         178 ------------HGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDT  245 (370)
T ss_pred             ------------CCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCC
Confidence                        456777777777654321    23457999999999997643    7889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.+.......+......                     ..+|.                        ...++..+.+
T Consensus       246 Pf~~~~~~~~~~~i~~~~~~---------------------~~~p~------------------------~~~~s~~~~~  280 (370)
T cd05621         246 PFYADSLVGTYSKIMDHKNS---------------------LNFPE------------------------DVEISKHAKN  280 (370)
T ss_pred             CCCCCCHHHHHHHHHhCCcc---------------------cCCCC------------------------cccCCHHHHH
Confidence            99877665554443321110                     01111                        1134666889


Q ss_pred             HHHHccccCCCC--CCCHHHHhcCCCCCCCc
Q 047395          400 LLQGLLRYDPSS--RLTAHDALKHPFFTRDY  428 (432)
Q Consensus       400 li~~~L~~dP~~--R~ta~elL~hp~f~~~~  428 (432)
                      +|.+||..++.+  |+|+.|+++||||+...
T Consensus       281 li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~  311 (370)
T cd05621         281 LICAFLTDREVRLGRNGVEEIKQHPFFKNDQ  311 (370)
T ss_pred             HHHHHccCchhccCCCCHHHHhcCcccCCCC
Confidence            999999865544  88999999999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=4.5e-47  Score=362.69  Aligned_cols=256  Identities=26%  Similarity=0.430  Sum_probs=205.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||+||+|++..+++.||+|+++....    ....+..|+.++..+.|     ++|+++++++...+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~-----~~i~~~~~~~~~~~~   75 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS-----PWIPQLQYAFQDKDN   75 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-----CCCcceeeEEecCCe
Confidence            469999999999999999999999999999999975432    34556778888877766     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.                 
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~-----------------  137 (330)
T cd05601          76 LYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR-----------------  137 (330)
T ss_pred             EEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC-----------------
Confidence            99999999 999999998763 36999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHh------CCCCCccchHHHHHHHHHHHHhCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVIL------GLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~------~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                .+.+||+|||++.......    ....||+.|+|||++.      +..++.++|||||||++|+|++|..
T Consensus       138 ----------~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~  207 (330)
T cd05601         138 ----------TGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRS  207 (330)
T ss_pred             ----------CCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCC
Confidence                      4456667777665433221    2246899999999997      4567899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||...+....+..+......                     ..+|                        ....++..+.+
T Consensus       208 Pf~~~~~~~~~~~i~~~~~~---------------------~~~~------------------------~~~~~~~~~~~  242 (330)
T cd05601         208 PFHEGTSAKTYNNIMNFQRF---------------------LKFP------------------------EDPKVSSDFLD  242 (330)
T ss_pred             CCCCCCHHHHHHHHHcCCCc---------------------cCCC------------------------CCCCCCHHHHH
Confidence            99876655544433221100                     0011                        01235667899


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ||.+||+ ||.+|||++++++||||....+
T Consensus       243 li~~ll~-~p~~R~t~~~l~~h~~~~~~~~  271 (330)
T cd05601         243 LIQSLLC-GQKERLGYEGLCCHPFFSKIDW  271 (330)
T ss_pred             HHHHHcc-ChhhCCCHHHHhCCCCcCCCCH
Confidence            9999998 9999999999999999987543

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=2.5e-46  Score=355.56  Aligned_cols=284  Identities=25%  Similarity=0.455  Sum_probs=207.8

Q ss_pred             EeeeecccceEEEEEEec--CCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--CCeEEEEE
Q 047395          100 LRKIGEGTFGQVLDCLDR--ETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--RNHICIVF  175 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~--~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--~~~~~lv~  175 (432)
                      .++||+|+||+||+|++.  .+++.||+|.++... ......+|+.+++.++|     +||+++++++..  ...+|+||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKH-----PNVISLQKVFLSHADRKVWLLF   79 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCC-----CCCcceeeeEecCCCcEEEEEE
Confidence            468999999999999965  467899999986532 23456789999999987     999999998753  46789999


Q ss_pred             ccCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          176 EMLGPSLYDFLRKNN-------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       176 e~~~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ||++++|.+++....       ...+++..++.++.||+.||.|||++||+||||||+|||+...               
T Consensus        80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~---------------  144 (317)
T cd07868          80 DYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGE---------------  144 (317)
T ss_pred             eccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecC---------------
Confidence            999889999886431       1258999999999999999999999999999999999998532               


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                              .+..+.+||+|||++......      ....+||+.|+|||++.+. .++.++|||||||++|+|++|++||
T Consensus       145 --------~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f  216 (317)
T cd07868         145 --------GPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF  216 (317)
T ss_pred             --------CCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCc
Confidence                    134567899999988654322      2335789999999999874 5889999999999999999999999


Q ss_pred             CCCCc---------HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHH-hhcCchhhhhhhhhcc
Q 047395          322 QTHEN---------LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA-VLKLPRLQNLVMQHVD  391 (432)
Q Consensus       322 ~~~~~---------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  391 (432)
                      .....         ...+..+...++.++...+...........            ....... ................
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~  284 (317)
T cd07868         217 HCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHST------------LMKDFRRNTYTNCSLIKYMEKHKV  284 (317)
T ss_pred             cCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhh------------hhhhhhccccCcccccchHHhcCC
Confidence            75432         345666677777666555444322111000            0000000 0000000011111122


Q ss_pred             cchHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      ..+..+.+||.+||++||.+|||++|+|+||||
T Consensus       285 ~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         285 KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             CCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            334568899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-46  Score=351.03  Aligned_cols=259  Identities=25%  Similarity=0.411  Sum_probs=208.5

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .|++.+.||+|+||+||++.+..+++.||||++....    .....+.+|+.+++.+.|     +||+++++.+..++.+
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~   75 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS-----RFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCC-----CCEeeeeeeecCCCeE
Confidence            4899999999999999999999999999999986432    122446679999988877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+||++++                  
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~------------------  137 (285)
T cd05605          76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDD------------------  137 (285)
T ss_pred             EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC------------------
Confidence            9999999 899999887654456999999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                               ++.++|+|||++......  ....+||..|+|||++.+..++.++||||+||++|+|++|..||.+.+...
T Consensus       138 ---------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~  208 (285)
T cd05605         138 ---------YGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV  208 (285)
T ss_pred             ---------CCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh
Confidence                     455677777766543221  123478999999999998889999999999999999999999998765433


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.......+                                             ......++..+.+||.+||+.|
T Consensus       209 ~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~li~~~l~~~  243 (285)
T cd05605         209 KREEVERRVKEDQ---------------------------------------------EEYSEKFSEAARSICRQLLTKD  243 (285)
T ss_pred             HHHHHHHHhhhcc---------------------------------------------cccCcccCHHHHHHHHHHccCC
Confidence            3222221111000                                             0011235666889999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCCccCC
Q 047395          409 PSSRL-----TAHDALKHPFFTRDYYRR  431 (432)
Q Consensus       409 P~~R~-----ta~elL~hp~f~~~~~~~  431 (432)
                      |++||     +++++++||||....+++
T Consensus       244 P~~R~~~~~~~~~~l~~~~~~~~~~~~~  271 (285)
T cd05605         244 PGFRLGCRGEGAEEVKAHPFFRTANFKR  271 (285)
T ss_pred             HHHhcCCCCCCHHHHhcCcCccCCCHHH
Confidence            99999     999999999999865543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=5.4e-46  Score=358.49  Aligned_cols=304  Identities=28%  Similarity=0.469  Sum_probs=231.5

Q ss_pred             CceeecCc---eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCc
Q 047395           84 HYLFALGE---NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSR  157 (432)
Q Consensus        84 ~~~~~~~~---~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~  157 (432)
                      ++++..|+   .+.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.+.|     +|
T Consensus         2 ~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~   76 (353)
T cd07850           2 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNH-----KN   76 (353)
T ss_pred             ceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCC-----CC
Confidence            46666666   4578999999999999999999999999999999998632   2233456789999998877     99


Q ss_pred             eeEeecccccC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEee
Q 047395          158 CVQIRNWFDYR------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFV  231 (432)
Q Consensus       158 iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  231 (432)
                      ++++++++...      ...|+||||++++|.+.+...    +++..+..++.||+.||+|||++||+||||||+||+++
T Consensus        77 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~  152 (353)
T cd07850          77 IIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  152 (353)
T ss_pred             CcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC
Confidence            99999987543      357999999988999988652    89999999999999999999999999999999999965


Q ss_pred             cCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhCCCCCccchHHHHHH
Q 047395          232 SPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGC  309 (432)
Q Consensus       232 ~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv  309 (432)
                      .                           ++.++|+|||++.......  ....+|..|+|||++.+..++.++|||||||
T Consensus       153 ~---------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~  205 (353)
T cd07850         153 S---------------------------DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC  205 (353)
T ss_pred             C---------------------------CCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHH
Confidence            4                           4456666666665433221  2346788999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhh
Q 047395          310 ILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH  389 (432)
Q Consensus       310 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (432)
                      ++|+|++|+.||...+.......+...++.++..+..........+.......-.      ..+................
T Consensus       206 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~  279 (353)
T cd07850         206 IMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAG------YSFEELFPDVLFPPDSESH  279 (353)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCC------cchhhhCcccccCcccccc
Confidence            9999999999999888888888888888888887776655544433322110000      0000000000000000111


Q ss_pred             cccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       390 ~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ....++.+++||.+||+.||++|||+.|+|+||||+..+.
T Consensus       280 ~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~  319 (353)
T cd07850         280 NKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD  319 (353)
T ss_pred             cccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence            2345667899999999999999999999999999986544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.1e-46  Score=364.22  Aligned_cols=279  Identities=23%  Similarity=0.398  Sum_probs=211.7

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||+||+|++..+++.||||+++...    .....+..|+.++..+.|     ++|+++++.+...+.
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~iv~~~~~~~~~~~   75 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG-----AWVVKMFYSFQDKRN   75 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC-----CCEeeEEEEEEcCCE
Confidence            36999999999999999999999999999999997532    233456778888888766     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ |++|.+++.+..  .+++..++.++.||+.||+|||++||+||||||+|||++.+|.++++|||++.....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~  153 (360)
T cd05627          76 LYLIMEFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK  153 (360)
T ss_pred             EEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence            99999999 999999998754  699999999999999999999999999999999999999888888888888754321


Q ss_pred             Ccc--ccccCCCCCCeEEeecCCccc------------ccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHH
Q 047395          250 DVN--YYKRLPKSSAIKVIDFGSTAY------------EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       250 ~~~--~~~~~~~~~~~kl~Dfg~a~~------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ell  315 (432)
                      ...  ........   .-.++.+...            ........+||+.|+|||++.+..++.++|||||||++|||+
T Consensus       154 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~  230 (360)
T cd05627         154 AHRTEFYRNLTHN---PPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML  230 (360)
T ss_pred             ccccccccccccC---CcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecc
Confidence            100  00000000   0001110000            001112357999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchH
Q 047395          316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG  395 (432)
Q Consensus       316 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (432)
                      +|..||.+.+.......+......+                     .+|.                        ...+++
T Consensus       231 tG~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~p~------------------------~~~~s~  265 (360)
T cd05627         231 IGYPPFCSETPQETYRKVMNWKETL---------------------VFPP------------------------EVPISE  265 (360)
T ss_pred             cCCCCCCCCCHHHHHHHHHcCCCce---------------------ecCC------------------------CCCCCH
Confidence            9999998776655444332211000                     0010                        012456


Q ss_pred             HHHHHHHHccccCCCCCC---CHHHHhcCCCCCCCcc
Q 047395          396 YLIDLLQGLLRYDPSSRL---TAHDALKHPFFTRDYY  429 (432)
Q Consensus       396 ~l~~li~~~L~~dP~~R~---ta~elL~hp~f~~~~~  429 (432)
                      .+.+||.+|+. ||.+|+   +++++++||||++..+
T Consensus       266 ~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~~  301 (360)
T cd05627         266 KAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGVDW  301 (360)
T ss_pred             HHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCCCH
Confidence            68899999874 999999   4899999999998654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=1.3e-46  Score=359.91  Aligned_cols=256  Identities=27%  Similarity=0.436  Sum_probs=199.7

Q ss_pred             ceEEEeeeecccceEEEEEEec---CCCcEEEEEEeechh-----hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           96 RYKILRKIGEGTFGQVLDCLDR---ETGETVAIKVVRSIK-----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      +|++++.||+|+||.||+|++.   .+++.||+|+++...     ...+....|+.++..+.+    |++|+++++++..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~----~~~i~~~~~~~~~   76 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQ----SPFLVTLHYAFQT   76 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccC----CCCcccEEEEEec
Confidence            4899999999999999999864   478999999997532     223456778888887753    4999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .+.+++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.              
T Consensus        77 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~--------------  140 (332)
T cd05614          77 EAKLHLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDS--------------  140 (332)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECC--------------
Confidence            99999999999 999999998754  6999999999999999999999999999999999999654              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccC----CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ----EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                   ++.+||+|||++.....    .....+||+.|+|||++.+. .++.++|||||||++|||++|..||
T Consensus       141 -------------~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf  207 (332)
T cd05614         141 -------------EGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPF  207 (332)
T ss_pred             -------------CCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCC
Confidence                         44567777776654221    12235789999999999875 4788999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ...........+.....                   .                          ........++..+.+||
T Consensus       208 ~~~~~~~~~~~~~~~~~-------------------~--------------------------~~~~~~~~~~~~~~~li  242 (332)
T cd05614         208 TLEGERNTQSEVSRRIL-------------------K--------------------------CDPPFPSFIGPEAQDLL  242 (332)
T ss_pred             CCCCCCCCHHHHHHHHh-------------------c--------------------------CCCCCCCCCCHHHHHHH
Confidence            75332111111110000                   0                          00011124566789999


Q ss_pred             HHccccCCCCCC-----CHHHHhcCCCCCCCcc
Q 047395          402 QGLLRYDPSSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       402 ~~~L~~dP~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      .+||+.||++||     +++++++||||++..+
T Consensus       243 ~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~  275 (332)
T cd05614         243 HKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDW  275 (332)
T ss_pred             HHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence            999999999999     8899999999987543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=6.5e-46  Score=350.12  Aligned_cols=281  Identities=28%  Similarity=0.477  Sum_probs=219.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++.++||.|+||.||+|.+..+++.||+|.++...  .....+.+|+.++..+.|     +||+++++++...+..|
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~nI~~~~~~~~~~~~~~   80 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH-----ANIVTLHDIIHTEKSLT   80 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCC-----CCcceEEEEEecCCeEE
Confidence            57999999999999999999999999999999986432  233456789999999877     99999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+|||++.+                   
T Consensus        81 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~-------------------  140 (301)
T cd07873          81 LVFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINER-------------------  140 (301)
T ss_pred             EEEeccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCC-------------------
Confidence            999999889999987654 368999999999999999999999999999999999997554                   


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              +.++|+|||++......   .....+++.|+|||++.+. .++.++|||||||++|+|++|++||...+..+
T Consensus       141 --------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~  212 (301)
T cd07873         141 --------GELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE  212 (301)
T ss_pred             --------CcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                    45666666665432211   1223568899999998764 47889999999999999999999999888888


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+....+.++...+........ +.   ...++..               ...........+++.+.+||.+||+.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~ml~~d  273 (301)
T cd07873         213 QLHFIFRILGTPTEETWPGILSNEE-FK---SYNYPKY---------------RADCLHNHAPRLDSDGAELLSKLLQFE  273 (301)
T ss_pred             HHHHHHHHcCCCChhhchhhhcccc-cc---ccccCcc---------------ccccHHhhcCCCCHHHHHHHHHHhcCC
Confidence            8777877777666554433211110 00   0001100               001111223456778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~  427 (432)
                      |.+|||++|+|+||||+.-
T Consensus       274 p~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         274 GRKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             cccCcCHHHHhcCcccccc
Confidence            9999999999999999753

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=6.9e-47  Score=360.54  Aligned_cols=246  Identities=25%  Similarity=0.430  Sum_probs=199.8

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||.||+|.+..+++.||+|+++...    ........|++++..+.|     +||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~h-----p~i~~~~~~~~~~~~~~lv~E   75 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-----PFLTALKYSFQTHDRLCFVME   75 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-----CCCCceEEEEEcCCEEEEEEe
Confidence            46999999999999999999999999997532    223455677887777766     999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      |+ +++|.+++....  .+++..++.++.||+.||.|||+ +||+||||||+|||++.                      
T Consensus        76 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~----------------------  131 (325)
T cd05594          76 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK----------------------  131 (325)
T ss_pred             CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC----------------------
Confidence            99 999999987654  69999999999999999999997 89999999999999654                      


Q ss_pred             ccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA  331 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~  331 (432)
                           ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+......
T Consensus       132 -----~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~  206 (325)
T cd05594         132 -----DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE  206 (325)
T ss_pred             -----CCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHH
Confidence                 4557777777665321   11233579999999999999899999999999999999999999998766544433


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+......                                                 .+..+++.+.+||.+||+.||++
T Consensus       207 ~i~~~~~~-------------------------------------------------~p~~~~~~~~~li~~~L~~dP~~  237 (325)
T cd05594         207 LILMEEIR-------------------------------------------------FPRTLSPEAKSLLSGLLKKDPKQ  237 (325)
T ss_pred             HHhcCCCC-------------------------------------------------CCCCCCHHHHHHHHHHhhcCHHH
Confidence            32111100                                                 11234566889999999999999


Q ss_pred             CC-----CHHHHhcCCCCCCCcc
Q 047395          412 RL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       412 R~-----ta~elL~hp~f~~~~~  429 (432)
                      |+     ++.++++||||.+..+
T Consensus       238 R~~~~~~~~~~il~h~~~~~~~~  260 (325)
T cd05594         238 RLGGGPDDAKEIMQHKFFAGIVW  260 (325)
T ss_pred             hCCCCCCCHHHHhcCCCcCCCCH
Confidence            97     9999999999987543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.6e-46  Score=357.43  Aligned_cols=247  Identities=23%  Similarity=0.360  Sum_probs=200.8

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||.||+|++..+++.||||+++...    ........|.+++..+.    .|++|+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~----~hp~i~~~~~~~~~~~~~~lv~E   76 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA----KHPFLTALHCCFQTKDRLFFVME   76 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc----CCCCccceeeEEEcCCeEEEEEe
Confidence            36999999999999999999999999997532    22334566777776553    24999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.                       
T Consensus        77 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~-----------------------  131 (321)
T cd05591          77 YVNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDA-----------------------  131 (321)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC-----------------------
Confidence            99 899999997754  6899999999999999999999999999999999999654                       


Q ss_pred             cCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 047395          256 RLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM  332 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~  332 (432)
                          ++.++|+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....
T Consensus       132 ----~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~  207 (321)
T cd05591         132 ----EGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFES  207 (321)
T ss_pred             ----CCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHH
Confidence                4567777777665421   122345789999999999998999999999999999999999999988776655544


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      +.......                                                 +..++.++.+||.+||+.||++|
T Consensus       208 i~~~~~~~-------------------------------------------------p~~~~~~~~~ll~~~L~~dp~~R  238 (321)
T cd05591         208 ILHDDVLY-------------------------------------------------PVWLSKEAVSILKAFMTKNPNKR  238 (321)
T ss_pred             HHcCCCCC-------------------------------------------------CCCCCHHHHHHHHHHhccCHHHc
Confidence            43211111                                                 11245568899999999999999


Q ss_pred             C-------CHHHHhcCCCCCCCcc
Q 047395          413 L-------TAHDALKHPFFTRDYY  429 (432)
Q Consensus       413 ~-------ta~elL~hp~f~~~~~  429 (432)
                      +       +++++++||||....+
T Consensus       239 ~~~~~~~~~~~~~~~hp~~~~~~~  262 (321)
T cd05591         239 LGCVASQGGEDAIKQHPFFKEIDW  262 (321)
T ss_pred             CCCCCCCCCHHHHhcCCccCCCCH
Confidence            9       9999999999977543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=3.1e-47  Score=333.91  Aligned_cols=294  Identities=30%  Similarity=0.496  Sum_probs=229.5

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCc----EEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGE----TVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~----~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ..|++++.||+|.||.||+|....++.    .+|||.++..+   .......+|+.+++.|+|     +|++.+..+|..
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h-----~nvi~Lv~Vfl~   98 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKH-----PNVISLVKVFLS   98 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcC-----CcchhHHHHHhc
Confidence            469999999999999999997665543    78999987543   234567899999999998     999999999876


Q ss_pred             -CCeEEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          168 -RNHICIVFEMLGPSLYDFLRKNN---YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       168 -~~~~~lv~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                       +..+++++||...+|.++|+-+.   .+.++...++.|+.||+.|+.|||++-|+||||||+||||..+|         
T Consensus        99 ~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdg---------  169 (438)
T KOG0666|consen   99 HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDG---------  169 (438)
T ss_pred             cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccC---------
Confidence             78999999999999999998532   24689999999999999999999999999999999999987653         


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCCc------cccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHh
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH------NYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~ellt  316 (432)
                                    +..+.|||+|||+++.....-      ...+-|.+|+|||++.|.. |+.+.||||+|||+.||+|
T Consensus       170 --------------perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLt  235 (438)
T KOG0666|consen  170 --------------PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLT  235 (438)
T ss_pred             --------------CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHc
Confidence                          457889999999998765443      2346799999999999875 8999999999999999999


Q ss_pred             CCCCCCCCC---------cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhc-Cchhhhhh
Q 047395          317 GEALFQTHE---------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK-LPRLQNLV  386 (432)
Q Consensus       317 g~~pf~~~~---------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  386 (432)
                      -++.|.+..         ..+++..|.+++|.+.+..|+.+.+..+.            ...-..++...- ...+..+.
T Consensus       236 l~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~------------q~~ls~f~~~~~~n~sL~~~~  303 (438)
T KOG0666|consen  236 LEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEY------------QTLLSDFRRHYYDNVSLHKYY  303 (438)
T ss_pred             cCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcch------------HHHHHHhHHhhcCcchHHHHH
Confidence            999997642         35688889999998887666554433221            111111111111 11122222


Q ss_pred             hhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       387 ~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      .. ...-++...+||.+||++||.+|+|++|+|+|+||+++..
T Consensus       304 ~~-~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~l  345 (438)
T KOG0666|consen  304 HK-HKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPL  345 (438)
T ss_pred             HH-hcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCC
Confidence            11 1223344789999999999999999999999999998754

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=5.7e-46  Score=353.76  Aligned_cols=252  Identities=25%  Similarity=0.370  Sum_probs=204.4

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      +|++.+.||+|+||+||+|++..+++.||+|++++...    .......|..++..+.|    +++|+++++++...+.+
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~----~~~i~~~~~~~~~~~~~   76 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDK----PPFLTQLHSCFQTVDRL   76 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccC----CCchhheeeEEecCCEE
Confidence            47889999999999999999999999999999975322    22345667777766654    47788899999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.                  
T Consensus        77 ~lv~Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~------------------  136 (323)
T cd05615          77 YFVMEYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDS------------------  136 (323)
T ss_pred             EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC------------------
Confidence            9999999 999999998754  6999999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                               ++.++|+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       137 ---------~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~  207 (323)
T cd05615         137 ---------EGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED  207 (323)
T ss_pred             ---------CCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence                     44567777776654221   123456899999999999988999999999999999999999999887665


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .....+.......                                                 +...+..+.+|+.+||+.
T Consensus       208 ~~~~~i~~~~~~~-------------------------------------------------p~~~~~~~~~li~~~l~~  238 (323)
T cd05615         208 ELFQSIMEHNVSY-------------------------------------------------PKSLSKEAVSICKGLMTK  238 (323)
T ss_pred             HHHHHHHhCCCCC-------------------------------------------------CccCCHHHHHHHHHHccc
Confidence            5544443221111                                                 123455688999999999


Q ss_pred             CCCCCCC-----HHHHhcCCCCCCCcc
Q 047395          408 DPSSRLT-----AHDALKHPFFTRDYY  429 (432)
Q Consensus       408 dP~~R~t-----a~elL~hp~f~~~~~  429 (432)
                      ||.+|++     .+++++||||....+
T Consensus       239 ~p~~R~~~~~~~~~~i~~h~~f~~~~~  265 (323)
T cd05615         239 HPSKRLGCGPEGERDIREHAFFRRIDW  265 (323)
T ss_pred             CHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence            9999997     579999999998654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=3.7e-46  Score=353.81  Aligned_cols=247  Identities=26%  Similarity=0.385  Sum_probs=197.6

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||+||+|++..+++.||||+++...    ........|..++..+    ..||||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~hp~iv~~~~~~~~~~~~~lv~e   76 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA----WEHPFLTHLYCTFQTKENLFFVME   76 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc----cCCCcCcceEEEEEeCCEEEEEEe
Confidence            46999999999999999999999999997542    2233455566666543    134999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.                       
T Consensus        77 y~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~-----------------------  131 (316)
T cd05619          77 YLNGGDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDT-----------------------  131 (316)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC-----------------------
Confidence            99 999999998753  6899999999999999999999999999999999999654                       


Q ss_pred             cCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 047395          256 RLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM  332 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~  332 (432)
                          ++.++|+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....
T Consensus       132 ----~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~  207 (316)
T cd05619         132 ----DGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS  207 (316)
T ss_pred             ----CCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                4456667777655321   122345789999999999998999999999999999999999999987765544433


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      +.......                                                 +..++..+.+||.+||+.||++|
T Consensus       208 i~~~~~~~-------------------------------------------------~~~~~~~~~~li~~~l~~~P~~R  238 (316)
T cd05619         208 IRMDNPCY-------------------------------------------------PRWLTREAKDILVKLFVREPERR  238 (316)
T ss_pred             HHhCCCCC-------------------------------------------------CccCCHHHHHHHHHHhccCHhhc
Confidence            32111000                                                 11245568899999999999999


Q ss_pred             CCHH-HHhcCCCCCCCcc
Q 047395          413 LTAH-DALKHPFFTRDYY  429 (432)
Q Consensus       413 ~ta~-elL~hp~f~~~~~  429 (432)
                      |++. ++++||||....+
T Consensus       239 ~~~~~~l~~h~~~~~~~~  256 (316)
T cd05619         239 LGVKGDIRQHPFFREIDW  256 (316)
T ss_pred             CCChHHHHcCcccCCCCH
Confidence            9996 9999999988654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2.7e-46  Score=355.30  Aligned_cols=247  Identities=26%  Similarity=0.380  Sum_probs=199.9

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||+||+|++..+++.||||+++...    ........|+.++..+.    .|+||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~----~h~~i~~~~~~~~~~~~~~lv~e   76 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG----KHPFLTQLHSCFQTKDRLFFVME   76 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc----CCCCccceeeEEEcCCEEEEEEc
Confidence            46999999999999999999999999997542    22345567777777664    34999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.+                      
T Consensus        77 ~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~----------------------  132 (318)
T cd05570          77 YVNGGDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSE----------------------  132 (318)
T ss_pred             CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCC----------------------
Confidence            99 999999988764  69999999999999999999999999999999999996554                      


Q ss_pred             cCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 047395          256 RLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM  332 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~  332 (432)
                           +.++|+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......
T Consensus       133 -----~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~  207 (318)
T cd05570         133 -----GHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS  207 (318)
T ss_pred             -----CcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence                 456666666654321   122335689999999999999999999999999999999999999987665544433


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      +......                                                 .+..++..+.+||.+||+.||++|
T Consensus       208 i~~~~~~-------------------------------------------------~~~~~~~~~~~li~~~l~~dP~~R  238 (318)
T cd05570         208 ILEDEVR-------------------------------------------------YPRWLSKEAKSILKSFLTKNPEKR  238 (318)
T ss_pred             HHcCCCC-------------------------------------------------CCCcCCHHHHHHHHHHccCCHHHc
Confidence            3211100                                                 012345668899999999999999


Q ss_pred             CCH-----HHHhcCCCCCCCcc
Q 047395          413 LTA-----HDALKHPFFTRDYY  429 (432)
Q Consensus       413 ~ta-----~elL~hp~f~~~~~  429 (432)
                      ||+     .++++||||+...+
T Consensus       239 ~s~~~~~~~~ll~~~~~~~~~~  260 (318)
T cd05570         239 LGCLPTGEQDIKGHPFFREIDW  260 (318)
T ss_pred             CCCCCCCHHHHhcCCCcCCCCH
Confidence            999     99999999987544

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=8.7e-46  Score=361.53  Aligned_cols=285  Identities=22%  Similarity=0.369  Sum_probs=210.7

Q ss_pred             CceecCceEEEeeeecccceEEEEEEec--CCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDR--ETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~--~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      +..+..+|++++.||+|+||.||+|...  .+++.||+|.+...    ....+|+++++.++|     +||+++++++..
T Consensus        87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h-----~~iv~~~~~~~~  157 (392)
T PHA03207         87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISH-----RAIINLIHAYRW  157 (392)
T ss_pred             chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCC-----CCccceeeeEee
Confidence            3445678999999999999999999754  35678999987643    234679999999987     999999999999


Q ss_pred             CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          168 RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       168 ~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      ...+|+|||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+              
T Consensus       158 ~~~~~lv~e~~~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~--------------  221 (392)
T PHA03207        158 KSTVCMVMPKYKCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEP--------------  221 (392)
T ss_pred             CCEEEEEehhcCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCC--------------
Confidence            9999999999988999999554  369999999999999999999999999999999999997654              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                   +.++|+|||++......     .....||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus       222 -------------~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~  288 (392)
T PHA03207        222 -------------ENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLF  288 (392)
T ss_pred             -------------CCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence                         45566666655432221     123578999999999999899999999999999999999999997


Q ss_pred             CCC---cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhh--hhhcccchHHH
Q 047395          323 THE---NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV--MQHVDHSAGYL  397 (432)
Q Consensus       323 ~~~---~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l  397 (432)
                      +..   ....+..+.+.++..|..+..........                 .+.......+.....  .......+.++
T Consensus       289 ~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (392)
T PHA03207        289 GKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK-----------------HFKQYAIVLRPPYTIPPVIRKYGMHMDV  351 (392)
T ss_pred             CCCCCCcHHHHHHHHHHhccCccccCCccchhHHH-----------------HHHhhcccccCCccccchhhccCcchhH
Confidence            654   34455556555554443221110000000                 000000000000000  00011345568


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      .+||.+||+.||++|||+.|+|+||||++.-.
T Consensus       352 ~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~  383 (392)
T PHA03207        352 EYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI  383 (392)
T ss_pred             HHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence            89999999999999999999999999987543

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-47  Score=333.64  Aligned_cols=260  Identities=27%  Similarity=0.451  Sum_probs=211.2

Q ss_pred             cCceEEE-eeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           94 TSRYKIL-RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        94 ~~~y~i~-~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+-|++. +.||+|+|+.|--++...+|..||||++.+.. -.+....+|++++...+    .|+||++++++|+++..+
T Consensus        76 ~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq----gh~nilqLiefFEdd~~F  151 (463)
T KOG0607|consen   76 EDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ----GHKNILQLIEFFEDDTRF  151 (463)
T ss_pred             HHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc----CCccHHHHHHHhcccceE
Confidence            3446665 57999999999999999999999999997654 34567888998887765    469999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |||||-+ ||+|...|.++.  .|++.++..++++|+.||+|||.+||.||||||+|||...++                
T Consensus       152 YLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn----------------  213 (463)
T KOG0607|consen  152 YLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPN----------------  213 (463)
T ss_pred             EEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCC----------------
Confidence            9999999 999999998875  699999999999999999999999999999999999987644                


Q ss_pred             ccccccCCCCCCeEEeecCCcccc----------cCCccccccCCCcchhHHHh---C--CCCCccchHHHHHHHHHHHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYE----------HQEHNYIVSTRHYRAPEVIL---G--LGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~----------~~~~~~~~gt~~y~aPE~~~---~--~~~~~~sDiwSlGvil~ell  315 (432)
                              .-..+|||||.+..-.          ...-.+.+|+..|||||+..   +  ..|+.++|.||||||+|-|+
T Consensus       214 --------~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImL  285 (463)
T KOG0607|consen  214 --------KVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIML  285 (463)
T ss_pred             --------CcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHH
Confidence                    3345788888765321          11223468999999999874   2  24889999999999999999


Q ss_pred             hCCCCCCCCCcH---------------HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCc
Q 047395          316 SGEALFQTHENL---------------EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP  380 (432)
Q Consensus       316 tg~~pf~~~~~~---------------~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (432)
                      +|.+||.+....               ..+..|.+....+|+.-                                    
T Consensus       286 sGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkd------------------------------------  329 (463)
T KOG0607|consen  286 SGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKD------------------------------------  329 (463)
T ss_pred             hCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhh------------------------------------
Confidence            999999875421               23333444444444332                                    


Q ss_pred             hhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       381 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                               +..+|.+..|||.++|..|+.+|.+|.++++|||++...
T Consensus       330 ---------WahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  330 ---------WAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             ---------hHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence                     335677789999999999999999999999999998754

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.6e-46  Score=356.14  Aligned_cols=246  Identities=26%  Similarity=0.426  Sum_probs=200.5

Q ss_pred             eeeecccceEEEEEEec---CCCcEEEEEEeechh-----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395          101 RKIGEGTFGQVLDCLDR---ETGETVAIKVVRSIK-----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +.||+|+||.||+|++.   .+++.||||+++...     .....+..|+.+++.+.|     +||+++++++..++.+|
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~h-----p~iv~~~~~~~~~~~~~   76 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKH-----PFIVDLIYAFQTGGKLY   76 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCC-----CchhceeeEEecCCeEE
Confidence            68999999999999864   468899999997532     223456789999998877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++...+  .+++..+..++.||+.||.|||++||+||||||+|||++.                   
T Consensus        77 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~-------------------  135 (323)
T cd05584          77 LILEYLSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDA-------------------  135 (323)
T ss_pred             EEEeCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC-------------------
Confidence            999999 899999998764  6899999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              ++.+||+|||++....   .......||+.|+|||++.+..++.++|||||||++|||++|..||...+...
T Consensus       136 --------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~  207 (323)
T cd05584         136 --------QGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK  207 (323)
T ss_pred             --------CCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH
Confidence                    4557777777665321   11233578999999999999889999999999999999999999998766554


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+......+                                                 +..+++.+.+||.+||+.|
T Consensus       208 ~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~li~~~l~~~  238 (323)
T cd05584         208 TIDKILKGKLNL-------------------------------------------------PPYLTPEARDLLKKLLKRN  238 (323)
T ss_pred             HHHHHHcCCCCC-------------------------------------------------CCCCCHHHHHHHHHHcccC
Confidence            443332211111                                                 1234566889999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCCcc
Q 047395          409 PSSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       409 P~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      |++||     +++++++||||....+
T Consensus       239 p~~R~~~~~~~~~~l~~h~~~~~~~~  264 (323)
T cd05584         239 PSSRLGAGPGDAAEVQSHPFFRHVNW  264 (323)
T ss_pred             HhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            99999     8999999999987543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=5.4e-46  Score=354.81  Aligned_cols=250  Identities=24%  Similarity=0.393  Sum_probs=195.7

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||.||+|++..+++.||||+++...    .....+..|..++..+.+    |+||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~----hp~Iv~~~~~~~~~~~~~lv~e   76 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASN----HPFLVGLHSCFQTESRLFFVIE   76 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccC----CCCCCceEEEEEcCCEEEEEEe
Confidence            46999999999999999999999999997532    223446678888877742    4999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||++.+                      
T Consensus        77 ~~~~g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~----------------------  132 (329)
T cd05588          77 FVSGGDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAE----------------------  132 (329)
T ss_pred             CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC----------------------
Confidence            99 999999987654  69999999999999999999999999999999999996544                      


Q ss_pred             cCCCCCCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH----
Q 047395          256 RLPKSSAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE----  328 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~----  328 (432)
                           +.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||......+    
T Consensus       133 -----~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~  207 (329)
T cd05588         133 -----GHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQ  207 (329)
T ss_pred             -----CCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccc
Confidence                 45666666665431   122234579999999999999999999999999999999999999996321100    


Q ss_pred             -HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          329 -HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       329 -~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                       ....+.+.                   +....                          ...+..++..+.+||.+||+.
T Consensus       208 ~~~~~~~~~-------------------~~~~~--------------------------~~~p~~~~~~~~~li~~~L~~  242 (329)
T cd05588         208 NTEDYLFQV-------------------ILEKQ--------------------------IRIPRSLSVKASSVLKGFLNK  242 (329)
T ss_pred             cchHHHHHH-------------------HHcCC--------------------------CCCCCCCCHHHHHHHHHHhcc
Confidence             00000000                   00000                          011234566789999999999


Q ss_pred             CCCCCCC------HHHHhcCCCCCCCc
Q 047395          408 DPSSRLT------AHDALKHPFFTRDY  428 (432)
Q Consensus       408 dP~~R~t------a~elL~hp~f~~~~  428 (432)
                      ||.+|+|      ++++++||||....
T Consensus       243 dP~~R~~~~~~~~~~~i~~hp~~~~~~  269 (329)
T cd05588         243 DPKERLGCHPQTGFRDIKSHPFFRNID  269 (329)
T ss_pred             CHHHcCCCCCCCCHHHHhcCCCCCCCC
Confidence            9999997      78999999998643

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=6.2e-46  Score=359.61  Aligned_cols=257  Identities=23%  Similarity=0.418  Sum_probs=205.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ..++|++.+.||+|+||.||+|++..+++.||+|++....    .....+.+|+.++..+.|     +||+++++.+..+
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~h-----p~iv~~~~~~~~~  115 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS-----PWVVQLFYAFQDD  115 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC-----CCCCeEEEEEEcC
Confidence            3578999999999999999999999999999999986422    223446678888888776     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ +++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.               
T Consensus       116 ~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~---------------  177 (371)
T cd05622         116 RYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK---------------  177 (371)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECC---------------
Confidence            9999999999 99999999765   4899999999999999999999999999999999999654               


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCC----CCccchHHHHHHHHHHHHhCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlGvil~elltg~~  319 (432)
                                  ++.+||+|||++......    ....+||+.|+|||++.+..    ++.++|||||||++|||++|..
T Consensus       178 ------------~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~  245 (371)
T cd05622         178 ------------SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT  245 (371)
T ss_pred             ------------CCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCC
Confidence                        456777777777653321    23457999999999997643    7889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.+.......+......+                     .+|                        ....++..+.+
T Consensus       246 Pf~~~~~~~~~~~i~~~~~~~---------------------~~~------------------------~~~~~s~~~~~  280 (371)
T cd05622         246 PFYADSLVGTYSKIMNHKNSL---------------------TFP------------------------DDNDISKEAKN  280 (371)
T ss_pred             CCCCCCHHHHHHHHHcCCCcc---------------------cCC------------------------CcCCCCHHHHH
Confidence            998876655444433211110                     011                        11245667899


Q ss_pred             HHHHccccCCCC--CCCHHHHhcCCCCCCCcc
Q 047395          400 LLQGLLRYDPSS--RLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       400 li~~~L~~dP~~--R~ta~elL~hp~f~~~~~  429 (432)
                      ||.+||..++.+  |++++|+++||||++..+
T Consensus       281 li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~~  312 (371)
T cd05622         281 LICAFLTDREVRLGRNGVEEIKRHLFFKNDQW  312 (371)
T ss_pred             HHHHHcCChhhhcCCCCHHHHhcCcccCCCCh
Confidence            999999844433  789999999999988654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=7.1e-47  Score=355.12  Aligned_cols=250  Identities=28%  Similarity=0.534  Sum_probs=221.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeec---hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe-
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH-  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~-  170 (432)
                      ++|.+++++|+|+||.+++++++..+..+++|.+.-   ....+.....|+.++.+++|     ||||.+.+.|..++. 
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~h-----P~iv~y~ds~~~~~~~   78 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLH-----PNIVEYKDSFEEDGQL   78 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccC-----CCeeeeccchhcCCce
Confidence            579999999999999999999999999999999863   33445578899999999988     999999999998887 


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +||||+|| ||+|.+.|.+.+..-++++.+..++.||+.|+.|||+++|+|||||+.|||                    
T Consensus        79 l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nif--------------------  138 (426)
T KOG0589|consen   79 LCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIF--------------------  138 (426)
T ss_pred             EEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhh--------------------
Confidence            99999999 999999999887677999999999999999999999999999999999999                    


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                             +..+..|+|+|||+|+......   .+.+||+.||.||++.+.+|+.|+|||||||++|||++-+++|.+.+.
T Consensus       139 -------ltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m  211 (426)
T KOG0589|consen  139 -------LTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM  211 (426)
T ss_pred             -------ccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch
Confidence                   4556677888888888765543   457899999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHh-CCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          327 LEHLAMMERVL-GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       327 ~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ......|.+.. .++|                                                 ..++.+++.||..||
T Consensus       212 ~~Li~ki~~~~~~Plp-------------------------------------------------~~ys~el~~lv~~~l  242 (426)
T KOG0589|consen  212 SELILKINRGLYSPLP-------------------------------------------------SMYSSELRSLVKSML  242 (426)
T ss_pred             HHHHHHHhhccCCCCC-------------------------------------------------ccccHHHHHHHHHHh
Confidence            87777766554 2222                                                 356777999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~  425 (432)
                      ..+|..||+|.++|.+|.+.
T Consensus       243 ~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  243 RKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             hcCCccCCCHHHHhhChhhh
Confidence            99999999999999998765

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-46  Score=306.26  Aligned_cols=279  Identities=32%  Similarity=0.504  Sum_probs=225.5

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|.-.++||+|.||+||+|+++.+++.||+|.++...   .......+|+.+++.|+|     .|||++++....++.+-
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkh-----knivrl~dvlhsdkklt   77 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-----KNIVRLHDVLHSDKKLT   77 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhh-----cceeehhhhhccCceeE
Confidence            4667789999999999999999999999999987432   345678899999999999     99999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +|+|||..+|..+..... +.++.+.++.++.|++.||.|+|++++.||||||.|.||+.+|.                 
T Consensus        78 lvfe~cdqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~nge-----------------  139 (292)
T KOG0662|consen   78 LVFEFCDQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGE-----------------  139 (292)
T ss_pred             EeHHHhhHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCc-----------------
Confidence            999999999999998765 46999999999999999999999999999999999999766555                 


Q ss_pred             ccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                                +||+|||+++..+-+.   +..+-|.+|++|.++.+.+ |++..|+||.|||+.|+.. |.+.|.+.+..
T Consensus       140 ----------lkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd  209 (292)
T KOG0662|consen  140 ----------LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  209 (292)
T ss_pred             ----------EEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH
Confidence                      4555555554433222   2235689999999999876 7899999999999999986 99999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +++..|.+.+|.+.++.|+.+..-.++.      .+|......             .+ .+..+..+..-+||++++|.-
T Consensus       210 dqlkrif~~lg~p~ed~wps~t~lpdyk------~yp~ypatt-------------sw-sqivp~lns~grdllqkll~c  269 (292)
T KOG0662|consen  210 DQLKRIFRLLGTPTEDQWPSMTKLPDYK------PYPIYPATT-------------SW-SQIVPKLNSTGRDLLQKLLKC  269 (292)
T ss_pred             HHHHHHHHHhCCCccccCCccccCCCCc------ccCCccccc-------------hH-HHHhhhhcchhHHHHHHHhcc
Confidence            9999999999998877666554433221      111111100             00 111233444468999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~  427 (432)
                      +|.+|++|+++|+||||.+.
T Consensus       270 np~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  270 NPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             CcccccCHHHHhcCcccccc
Confidence            99999999999999999863

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=5.3e-46  Score=354.11  Aligned_cols=246  Identities=27%  Similarity=0.416  Sum_probs=195.4

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHH-HHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDV-LELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~-l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      +.||+|+||+||+|++..+++.||||++.....    ....+..|... ++.++|     +||+++++++...+..|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~h-----p~iv~~~~~~~~~~~~~lv~   75 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKH-----PFLVGLHYSFQTADKLYFVL   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCC-----CCCCCeeEEEEeCCEEEEEE
Confidence            469999999999999999999999999975321    12233444433 344544     99999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          176 EML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.                      
T Consensus        76 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~----------------------  131 (323)
T cd05575          76 DYVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDS----------------------  131 (323)
T ss_pred             cCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC----------------------
Confidence            999 999999998754  6999999999999999999999999999999999999654                      


Q ss_pred             ccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA  331 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~  331 (432)
                           ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+...
T Consensus       132 -----~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~  206 (323)
T cd05575         132 -----QGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYD  206 (323)
T ss_pred             -----CCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHH
Confidence                 4456777777665321   12234578999999999999899999999999999999999999998766554443


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+......                                                 .....+..+.+||.+||+.||.+
T Consensus       207 ~i~~~~~~-------------------------------------------------~~~~~~~~~~~li~~~l~~~p~~  237 (323)
T cd05575         207 NILNKPLR-------------------------------------------------LKPNISVSARHLLEGLLQKDRTK  237 (323)
T ss_pred             HHHcCCCC-------------------------------------------------CCCCCCHHHHHHHHHHhhcCHHh
Confidence            33221000                                                 01234566889999999999999


Q ss_pred             CCCH----HHHhcCCCCCCCcc
Q 047395          412 RLTA----HDALKHPFFTRDYY  429 (432)
Q Consensus       412 R~ta----~elL~hp~f~~~~~  429 (432)
                      ||++    .++++||||....+
T Consensus       238 R~~~~~~~~~il~~~~~~~~~~  259 (323)
T cd05575         238 RLGAKDDFLEIKNHVFFSSINW  259 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCCCCH
Confidence            9997    69999999987543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=1.2e-45  Score=352.99  Aligned_cols=296  Identities=22%  Similarity=0.352  Sum_probs=210.8

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .++|++.++||.|+||.||+|.+..++..+|+|+++..  ......+.+|++++..+.|     +||+++++++...+.+
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~   78 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS-----PYIVGFYGAFYSDGEI   78 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC-----CcccceeEEEEECCEE
Confidence            47899999999999999999999999999999998643  2344678899999999877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||.|||+. +|+||||||+|||++.                 
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~-----------------  139 (333)
T cd06650          79 SICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS-----------------  139 (333)
T ss_pred             EEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC-----------------
Confidence            9999999 999999998754  689999999999999999999974 7999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                ++.+||+|||++..... ......||..|+|||++.+..++.++|||||||++|+|++|+.||......+
T Consensus       140 ----------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~  209 (333)
T cd06650         140 ----------RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKE  209 (333)
T ss_pred             ----------CCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhH
Confidence                      44567777776654322 2234578999999999998889999999999999999999999998665433


Q ss_pred             HHHHHHHHh-CCCCHHHHHhcCCcchhhhccCCcCC-CCCCCCHHHHHHhhcCchhhhhhhh-hcccchHHHHHHHHHcc
Q 047395          329 HLAMMERVL-GPIPQHMLKRVDKPAEKFVRRGRLDW-PEGATSRESIKAVLKLPRLQNLVMQ-HVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       329 ~~~~i~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~L  405 (432)
                      ....+.... +.......    .............+ |....... ....... ........ .....+.++.+||.+||
T Consensus       210 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L  283 (333)
T cd06650         210 LELMFGCPVEGDPAESET----SPRPRPPGRPLSSYGPDSRPPMA-IFELLDY-IVNEPPPKLPSGVFGAEFQDFVNKCL  283 (333)
T ss_pred             HHHHhcCcccCCcccccc----CcccCCccchhhhhccccccccc-HHHHHHH-HhcCCCccCCCCCcCHHHHHHHHHhc
Confidence            222111100 10000000    00000000000000 00000000 0000000 00000000 01235677999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          406 RYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      +.||++|||+.|+++||||+....
T Consensus       284 ~~~P~~Rpt~~ell~h~~~~~~~~  307 (333)
T cd06650         284 IKNPAERADLKQLMVHAFIKRSEA  307 (333)
T ss_pred             cCCcccCcCHHHHhhCHHHhcCcc
Confidence            999999999999999999987643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-46  Score=354.78  Aligned_cols=244  Identities=25%  Similarity=0.357  Sum_probs=208.0

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      ..+++++.||+|.||.||+|.+.. ...||+|.++......+.+.+|+++|+.|+|     ++||++++++..++.+|||
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H-----~~lV~l~gV~~~~~piyIV  279 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKLRH-----EKLVKLYGVCTKQEPIYIV  279 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhCcc-----cCeEEEEEEEecCCceEEE
Confidence            456778999999999999999874 3479999998877777889999999999999     9999999999998899999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+ .|+|.++|+......+...+.+.++.||++|++||+++++|||||-..||||++                     
T Consensus       280 tE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~---------------------  338 (468)
T KOG0197|consen  280 TEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDE---------------------  338 (468)
T ss_pred             EEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeecc---------------------
Confidence            9999 999999999855567999999999999999999999999999999999999655                     


Q ss_pred             cccCCCCCCeEEeecCCcccccCCcc-ccc---cCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQEHN-YIV---STRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE  328 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~---gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~  328 (432)
                            +..+||+|||+|+....... ...   -...|.|||.+....++.+||||||||+||||+| |+.||.+.+..+
T Consensus       339 ------~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e  412 (468)
T KOG0197|consen  339 ------DLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE  412 (468)
T ss_pred             ------CceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH
Confidence                  44566666666664332221 111   2457999999999999999999999999999999 999999999988


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .+..+.+...                                                ...++.+++++.+++..||..+
T Consensus       413 v~~~le~GyR------------------------------------------------lp~P~~CP~~vY~lM~~CW~~~  444 (468)
T KOG0197|consen  413 VLELLERGYR------------------------------------------------LPRPEGCPDEVYELMKSCWHED  444 (468)
T ss_pred             HHHHHhccCc------------------------------------------------CCCCCCCCHHHHHHHHHHhhCC
Confidence            8887765432                                                2234578899999999999999


Q ss_pred             CCCCCCHHHHh
Q 047395          409 PSSRLTAHDAL  419 (432)
Q Consensus       409 P~~R~ta~elL  419 (432)
                      |++|||.+.+.
T Consensus       445 P~~RPtF~~L~  455 (468)
T KOG0197|consen  445 PEDRPTFETLR  455 (468)
T ss_pred             cccCCCHHHHH
Confidence            99999998765

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-45  Score=351.82  Aligned_cols=258  Identities=26%  Similarity=0.421  Sum_probs=202.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||+||+|++..+++.||+|++.+..    .....+.+|+.++..+.|     ++|+.+++++..+++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~~~~~   75 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR-----RWITNLHYAFQDENN   75 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC-----CCCCceEEEEecCCe
Confidence            47999999999999999999999999999999997532    223446778888877766     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.                 
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~-----------------  137 (331)
T cd05597          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK-----------------  137 (331)
T ss_pred             EEEEEecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC-----------------
Confidence            99999999 999999997643 36899999999999999999999999999999999999644                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhC-----CCCCccchHHHHHHHHHHHHhCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                ++.++|+|||++.......    ...+||+.|+|||++.+     ..++.++|||||||++|+|++|..|
T Consensus       138 ----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~P  207 (331)
T cd05597         138 ----------NGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETP  207 (331)
T ss_pred             ----------CCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCC
Confidence                      4567778887765432211    22468999999999973     3478899999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...+..+....+.......                     ..+                       .....++..+++|
T Consensus       208 f~~~~~~~~~~~i~~~~~~~---------------------~~~-----------------------~~~~~~~~~~~~l  243 (331)
T cd05597         208 FYAESLVETYGKIMNHKEHF---------------------QFP-----------------------PDVTDVSEEAKDL  243 (331)
T ss_pred             CCCCCHHHHHHHHHcCCCcc---------------------cCC-----------------------CccCCCCHHHHHH
Confidence            98766555443332211000                     000                       0112356678999


Q ss_pred             HHHccccCCCC--CCCHHHHhcCCCCCCCcc
Q 047395          401 LQGLLRYDPSS--RLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       401 i~~~L~~dP~~--R~ta~elL~hp~f~~~~~  429 (432)
                      |++||..++++  |++++++++||||.+..+
T Consensus       244 i~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~  274 (331)
T cd05597         244 IRRLICSPETRLGRNGLQDFKDHPFFEGIDW  274 (331)
T ss_pred             HHHHccCcccccCCCCHHHHhcCCCCCCCCH
Confidence            99999765444  789999999999987543

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=9.4e-46  Score=353.06  Aligned_cols=251  Identities=24%  Similarity=0.391  Sum_probs=195.3

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||+||+|++..+++.||+|++++..    .....+..|+.++..+.    .|+||+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~----~hp~iv~~~~~~~~~~~~~lv~E   76 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS----NHPFLVGLHSCFQTESRLFFVIE   76 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcC----CCCcCCceeeEEEeCCEEEEEEe
Confidence            46999999999999999999999999997532    22344667777776553    24999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.                       
T Consensus        77 ~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~-----------------------  131 (329)
T cd05618          77 YVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS-----------------------  131 (329)
T ss_pred             CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC-----------------------
Confidence            99 999999887654  6999999999999999999999999999999999999654                       


Q ss_pred             cCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH----
Q 047395          256 RLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE----  328 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~----  328 (432)
                          ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.......    
T Consensus       132 ----~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~  207 (329)
T cd05618         132 ----EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ  207 (329)
T ss_pred             ----CCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCccc
Confidence                4557777777665421   12234578999999999999999999999999999999999999995321100    


Q ss_pred             -HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          329 -HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       329 -~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                       ....+...                   +....                          ...+...+..+.+||.+||+.
T Consensus       208 ~~~~~~~~~-------------------i~~~~--------------------------~~~p~~~~~~~~~ll~~~L~~  242 (329)
T cd05618         208 NTEDYLFQV-------------------ILEKQ--------------------------IRIPRSLSVKAASVLKSFLNK  242 (329)
T ss_pred             ccHHHHHHH-------------------HhcCC--------------------------CCCCCCCCHHHHHHHHHHhcC
Confidence             00000000                   00000                          011234566788999999999


Q ss_pred             CCCCCCC------HHHHhcCCCCCCCcc
Q 047395          408 DPSSRLT------AHDALKHPFFTRDYY  429 (432)
Q Consensus       408 dP~~R~t------a~elL~hp~f~~~~~  429 (432)
                      ||++|+|      +.++++||||++..+
T Consensus       243 dP~~R~~~~~~~~~~~i~~hp~f~~~~~  270 (329)
T cd05618         243 DPKERLGCHPQTGFADIQGHPFFRNVDW  270 (329)
T ss_pred             CHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence            9999998      579999999987543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.5e-45  Score=344.81  Aligned_cols=257  Identities=25%  Similarity=0.414  Sum_probs=204.9

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+....    .....+..|+.++..+.|     ++++.+++.+...+..
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~-----~~i~~~~~~~~~~~~~   75 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNS-----RFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCC-----CCeeeeeEEEecCCEE
Confidence            4788899999999999999999999999999986432    223446679999888877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.                  
T Consensus        76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~------------------  137 (285)
T cd05630          76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDD------------------  137 (285)
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC------------------
Confidence            9999999 899999997655456999999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                               .+.++|+|||++......  .....||..|+|||++.+..++.++|||||||++|+|++|..||.......
T Consensus       138 ---------~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~  208 (285)
T cd05630         138 ---------HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI  208 (285)
T ss_pred             ---------CCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc
Confidence                     445677777766543222  123478999999999999899999999999999999999999997643321


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ............                                             .......+++.+.+||.+||+.|
T Consensus       209 ~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~li~~~l~~~  243 (285)
T cd05630         209 KREEVERLVKEV---------------------------------------------QEEYSEKFSPDARSLCKMLLCKD  243 (285)
T ss_pred             hHHHHHhhhhhh---------------------------------------------hhhcCccCCHHHHHHHHHHhhcC
Confidence            111111100000                                             00112345666889999999999


Q ss_pred             CCCCCC-----HHHHhcCCCCCCCcc
Q 047395          409 PSSRLT-----AHDALKHPFFTRDYY  429 (432)
Q Consensus       409 P~~R~t-----a~elL~hp~f~~~~~  429 (432)
                      |++|||     ++|+++||||++..+
T Consensus       244 p~~R~s~~~~~~~~~~~h~~~~~~~~  269 (285)
T cd05630         244 PKERLGCQGGGAREVKEHPLFKQINF  269 (285)
T ss_pred             HHHccCCCCCchHHHHcChhhhccCH
Confidence            999999     999999999987544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.8e-45  Score=343.51  Aligned_cols=250  Identities=23%  Similarity=0.367  Sum_probs=197.6

Q ss_pred             eecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       103 lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      ||+|+||+||+|.+..+++.||+|++.....    ..+.+..|+.+++.+.|     +||+++.+++......|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~-----~~i~~~~~~~~~~~~~~lv~e~~   75 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHS-----RFIVSLAYAFQTKTDLCLVMTIM   75 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCC-----CcEeeeeEEEcCCCeEEEEEeCC
Confidence            6999999999999999999999999864321    22456778999988876     99999999999999999999999


Q ss_pred             -CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          179 -GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       179 -~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                       +++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+||+++.                       
T Consensus        76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~-----------------------  132 (280)
T cd05608          76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN-----------------------  132 (280)
T ss_pred             CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-----------------------
Confidence             99999887542  2246899999999999999999999999999999999999654                       


Q ss_pred             cCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 047395          256 RLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM  332 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~  332 (432)
                          ++.++|+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...........
T Consensus       133 ----~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~  208 (280)
T cd05608         133 ----DGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE  208 (280)
T ss_pred             ----CCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHH
Confidence                455777777776543221   2234789999999999999999999999999999999999999976543211111


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      +.......+                                             ......++..+.+|+.+||+.||++|
T Consensus       209 ~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~li~~~l~~~P~~R  243 (280)
T cd05608         209 LKQRILNDS---------------------------------------------VTYPDKFSPASKSFCEALLAKDPEKR  243 (280)
T ss_pred             HHHhhcccC---------------------------------------------CCCcccCCHHHHHHHHHHhcCCHHHh
Confidence            111000000                                             00112456678999999999999999


Q ss_pred             C-----CHHHHhcCCCCCCCcc
Q 047395          413 L-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       413 ~-----ta~elL~hp~f~~~~~  429 (432)
                      |     |++++++||||++..+
T Consensus       244 ~~~~~~~~~~~l~h~~~~~~~~  265 (280)
T cd05608         244 LGFRDGNCDGLRTHPLFRDLNW  265 (280)
T ss_pred             cCCCCCCHHHHhcChhhhcCCH
Confidence            9     8899999999987544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=4.6e-45  Score=341.33  Aligned_cols=276  Identities=32%  Similarity=0.493  Sum_probs=211.3

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.+.||+|+||.||+|++..+|+.||+|.++...   .....+.+|+.+++.++|     +|++++++++...+..+
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h-----~~i~~~~~~~~~~~~~~   75 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-----KNIVRLYDVLHSDKKLT   75 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCC-----CCeeeHHHHhccCCceE
Confidence            5899999999999999999999999999999986432   223456789999999877     99999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +|+||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++                  
T Consensus        76 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~------------------  136 (284)
T cd07839          76 LVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG------------------  136 (284)
T ss_pred             EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC------------------
Confidence            999999889999887643 3699999999999999999999999999999999999976544                  


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCCCC-CCCCcH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALF-QTHENL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~pf-~~~~~~  327 (432)
                               .++|+|||++......   .....++..|+|||++.+.. ++.++|||||||++|+|++|..|| .+.+..
T Consensus       137 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~  207 (284)
T cd07839         137 ---------ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  207 (284)
T ss_pred             ---------cEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH
Confidence                     4555566555432221   12235688999999987754 689999999999999999988875 555556


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +.+..+.+..+..+...+.........      ..++.....              ....+....+++.+.+||.+||+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~--------------~~~~~~~~~~~~~~~~li~~~l~~  267 (284)
T cd07839         208 DQLKRIFRLLGTPTEESWPGVSKLPDY------KPYPMYPAT--------------TSLVNVVPKLNSTGRDLLQNLLVC  267 (284)
T ss_pred             HHHHHHHHHhCCCChHHhHHhhhcccc------cccCCCCCc--------------chhhhhcccCCHHHHHHHHHHhcC
Confidence            666667776666655443332211110      000000000              000122345678899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 047395          408 DPSSRLTAHDALKHPFF  424 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f  424 (432)
                      ||.+|||++++++||||
T Consensus       268 ~P~~R~t~~~il~h~~f  284 (284)
T cd07839         268 NPVQRISAEEALQHPYF  284 (284)
T ss_pred             ChhhcCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-47  Score=352.82  Aligned_cols=259  Identities=27%  Similarity=0.477  Sum_probs=220.7

Q ss_pred             ecCceEEE--eeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           93 LTSRYKIL--RKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        93 ~~~~y~i~--~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      +..-|+|.  +.||+|.||+||-|.++.+|+.||||++.+.   .+..+.+.+|+.||+.+.|     |.||.+...|+.
T Consensus       560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~H-----PGiV~le~M~ET  634 (888)
T KOG4236|consen  560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHH-----PGIVNLECMFET  634 (888)
T ss_pred             HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCC-----CCeeEEEEeecC
Confidence            34457765  7899999999999999999999999999753   3445788899999999988     999999999999


Q ss_pred             CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          168 RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       168 ~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      .+.+++|||-+.|++.+.|-....+++++...+.++.||+.||.|||.+||+|+||||+|||+.+               
T Consensus       635 ~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas---------------  699 (888)
T KOG4236|consen  635 PERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLAS---------------  699 (888)
T ss_pred             CceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeecc---------------
Confidence            99999999999888877777665678999999999999999999999999999999999999876               


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                               .+.-.++||||||+|+.....  ....+|||.|+|||++.++.|+..-|+||.|||+|--++|..||....
T Consensus       700 ---------~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE  770 (888)
T KOG4236|consen  700 ---------ASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE  770 (888)
T ss_pred             ---------CCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc
Confidence                     456678999999999987754  466799999999999999999999999999999999999999997544


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      +.  ..+|...                       ...+|..                      -+.++++.+.|||+++|
T Consensus       771 dI--ndQIQNA-----------------------aFMyPp~----------------------PW~eis~~AidlIn~LL  803 (888)
T KOG4236|consen  771 DI--NDQIQNA-----------------------AFMYPPN----------------------PWSEISPEAIDLINNLL  803 (888)
T ss_pred             ch--hHHhhcc-----------------------ccccCCC----------------------chhhcCHHHHHHHHHHH
Confidence            32  2223222                       1222211                      12467778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +..-.+|.|.++.|.|||+++.
T Consensus       804 qVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  804 QVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHHHHHhcchHhhccchhhhcc
Confidence            9999999999999999999874

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.4e-45  Score=355.73  Aligned_cols=278  Identities=22%  Similarity=0.378  Sum_probs=203.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      .+|++++.||+|+||.||+|++..+++.||+|+....     ....|+.++..+.|     +||+++++++...+..|+|
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~~lv  135 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNH-----PSVIRMKDTLVSGAITCMV  135 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCC-----CCCcChhheEEeCCeeEEE
Confidence            4799999999999999999999999999999985432     23468888888877     9999999999999999999


Q ss_pred             EccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          175 FEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       175 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ||++.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.                      
T Consensus       136 ~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~----------------------  192 (357)
T PHA03209        136 LPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND----------------------  192 (357)
T ss_pred             EEccCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC----------------------
Confidence            9999889999987654 46999999999999999999999999999999999999654                      


Q ss_pred             ccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCC-CCCCCCCc-----
Q 047395          255 KRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE-ALFQTHEN-----  326 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~-~pf~~~~~-----  326 (432)
                           .+.++|+|||.+.....  ......||+.|+|||++.+..++.++|||||||++|||+++. .+|.....     
T Consensus       193 -----~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~  267 (357)
T PHA03209        193 -----VDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEY  267 (357)
T ss_pred             -----CCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHH
Confidence                 45577777777654322  223357899999999999989999999999999999999854 44443221     


Q ss_pred             ----HHHHHHHHHHhCCCCHHHHHhcCC-cchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          327 ----LEHLAMMERVLGPIPQHMLKRVDK-PAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       327 ----~~~~~~i~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                          ...+..+...++..|..+...... ....++.....               .+.+ ...........++..+.+||
T Consensus       268 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~-~~~~~~~~~~~~~~~~~~li  331 (357)
T PHA03209        268 VKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASL---------------ERQP-YTRYPCFQRVNLPIDGEFLV  331 (357)
T ss_pred             HHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhccc---------------CCCc-ccccHHHhccCCCchHHHHH
Confidence                122333333334333222100000 00000000000               0000 00000111124556678999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      .+||+.||.+||||.|+|+||||++
T Consensus       332 ~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        332 HKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             HHHHcCCcccCcCHHHHhcCchhcc
Confidence            9999999999999999999999986

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.4e-46  Score=353.96  Aligned_cols=245  Identities=27%  Similarity=0.446  Sum_probs=200.3

Q ss_pred             eeeecccceEEEEEEec---CCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395          101 RKIGEGTFGQVLDCLDR---ETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~---~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      +.||+|+||.||++++.   .+|+.||+|+++...   ........|++++..+.|     +||+++++++..++.+|+|
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~~~~~lv   76 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNH-----PFIVKLHYAFQTEGKLYLI   76 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCC-----CCcccEEEEEEcCCEEEEE
Confidence            57999999999999863   578999999997533   223456678888888877     9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+ +++|.+++.+..  .+++..++.++.||+.||.|||++||+||||||+|||++.                     
T Consensus        77 ~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~---------------------  133 (318)
T cd05582          77 LDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE---------------------  133 (318)
T ss_pred             EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECC---------------------
Confidence            9999 899999997654  6999999999999999999999999999999999999654                     


Q ss_pred             cccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL  330 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~  330 (432)
                            ++.++|+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+..
T Consensus       134 ------~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~  207 (318)
T cd05582         134 ------EGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETM  207 (318)
T ss_pred             ------CCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHH
Confidence                  455777777776543222   23357899999999999988999999999999999999999999877655544


Q ss_pred             HHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCC
Q 047395          331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPS  410 (432)
Q Consensus       331 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  410 (432)
                      ..+......+                                                 +..++..+.+||++||+.||+
T Consensus       208 ~~i~~~~~~~-------------------------------------------------p~~~~~~~~~li~~~l~~~P~  238 (318)
T cd05582         208 TMILKAKLGM-------------------------------------------------PQFLSPEAQSLLRALFKRNPA  238 (318)
T ss_pred             HHHHcCCCCC-------------------------------------------------CCCCCHHHHHHHHHHhhcCHh
Confidence            4332211111                                                 123456688999999999999


Q ss_pred             CCCC-----HHHHhcCCCCCCCc
Q 047395          411 SRLT-----AHDALKHPFFTRDY  428 (432)
Q Consensus       411 ~R~t-----a~elL~hp~f~~~~  428 (432)
                      +|||     ++++++||||....
T Consensus       239 ~R~~a~~~~~~~~~~~~~~~~~~  261 (318)
T cd05582         239 NRLGAGPDGVEEIKRHPFFSTID  261 (318)
T ss_pred             HcCCCCCCCHHHHhCCCCcCCCC
Confidence            9999     77899999998753

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=9.6e-45  Score=344.68  Aligned_cols=284  Identities=26%  Similarity=0.478  Sum_probs=204.8

Q ss_pred             EeeeecccceEEEEEEecC--CCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc--cCCeEEEEE
Q 047395          100 LRKIGEGTFGQVLDCLDRE--TGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD--YRNHICIVF  175 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~--~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~--~~~~~~lv~  175 (432)
                      ..+||+|+||+||+|++..  ++..||+|.++... ....+.+|+.++..++|     +||+++++++.  .+..+|+||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKH-----PNVIALQKVFLSHSDRKVWLLF   79 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCC-----CCeeeEEEEEeccCCCeEEEEE
Confidence            3689999999999999654  56899999986532 23457789999999887     99999999874  456889999


Q ss_pred             ccCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          176 EMLGPSLYDFLRKNN-------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       176 e~~~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ||++++|.+++....       ...+++..++.++.||+.||.|||++||+||||||+|||+..+               
T Consensus        80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~---------------  144 (317)
T cd07867          80 DYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGE---------------  144 (317)
T ss_pred             eeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccC---------------
Confidence            999889999886321       1248899999999999999999999999999999999998432               


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                              .+..+.+||+|||++......      .....||+.|+|||++.+. .++.++|||||||++|||+||.+||
T Consensus       145 --------~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f  216 (317)
T cd07867         145 --------GPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF  216 (317)
T ss_pred             --------CCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCc
Confidence                    134567888888888654322      2235689999999999774 5789999999999999999999999


Q ss_pred             CCCCc---------HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHH-hhcCchhhhhhhhhcc
Q 047395          322 QTHEN---------LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA-VLKLPRLQNLVMQHVD  391 (432)
Q Consensus       322 ~~~~~---------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  391 (432)
                      .....         ......+...++......+.........         +   ........ ................
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~---~~~~~~~~~~~~~~~~~~~~~~~~~  284 (317)
T cd07867         217 HCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEY---------P---TLQKDFRRTTYANSSLIKYMEKHKV  284 (317)
T ss_pred             ccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccc---------h---hhhhhhcccccCCchhhhhhhcccC
Confidence            75432         2345555566665554444332211100         0   00000000 0000011111111122


Q ss_pred             cchHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      ..+..+.+||.+||+.||.+|||+.|+|+||||
T Consensus       285 ~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         285 KPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             CCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            345668999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=2.3e-45  Score=350.02  Aligned_cols=245  Identities=26%  Similarity=0.396  Sum_probs=194.4

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHH-HHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDV-LELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~-l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      +.||+|+||+||+|++..+|+.||+|++.....    ....+..|..+ ++.+.|     +||+++++++...+..|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-----p~iv~~~~~~~~~~~~~lv~   75 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKH-----PFLVGLHYSFQTTEKLYFVL   75 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCC-----CCCccEEEEEecCCEEEEEE
Confidence            469999999999999999999999999975321    22334444433 344444     99999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          176 EML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ||+ +++|..++....  .+++..++.++.||+.||+|||++||+||||||+|||++.                      
T Consensus        76 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~----------------------  131 (325)
T cd05604          76 DFVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDS----------------------  131 (325)
T ss_pred             cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC----------------------
Confidence            999 999999987654  6999999999999999999999999999999999999654                      


Q ss_pred             ccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA  331 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~  331 (432)
                           ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+...
T Consensus       132 -----~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~  206 (325)
T cd05604         132 -----QGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYD  206 (325)
T ss_pred             -----CCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHH
Confidence                 4456777777665321   12234579999999999999999999999999999999999999998766554433


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+.....                                                 ...+..+..+.++|.+||+.||.+
T Consensus       207 ~~~~~~~-------------------------------------------------~~~~~~~~~~~~ll~~ll~~~p~~  237 (325)
T cd05604         207 NILHKPL-------------------------------------------------VLRPGASLTAWSILEELLEKDRQR  237 (325)
T ss_pred             HHHcCCc-------------------------------------------------cCCCCCCHHHHHHHHHHhccCHHh
Confidence            3321100                                                 001234556889999999999999


Q ss_pred             CCCH----HHHhcCCCCCCCc
Q 047395          412 RLTA----HDALKHPFFTRDY  428 (432)
Q Consensus       412 R~ta----~elL~hp~f~~~~  428 (432)
                      ||++    .++++||||....
T Consensus       238 R~~~~~~~~~i~~h~~f~~~~  258 (325)
T cd05604         238 RLGAKEDFLEIQEHPFFESLS  258 (325)
T ss_pred             cCCCCCCHHHHhcCCCcCCCC
Confidence            9976    5999999998743

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.3e-44  Score=338.34  Aligned_cols=277  Identities=31%  Similarity=0.513  Sum_probs=211.8

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.+.||+|++|.||+|++..+++.||||+++...   .....+.+|+.++..+.|     +|++++++++..++.+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~   75 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH-----PNIVCLQDVLMQESRLY   75 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC-----CCEeeeEEEEeeCCeEE
Confidence            4889999999999999999999999999999986432   223567789999998876     99999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEMLGPSLYDFLRKNNY-RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+.++|.+++..... ..+++..++.++.||+.||.|||++||+|+||||+|||++.++                 
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~-----------------  138 (285)
T cd07861          76 LIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG-----------------  138 (285)
T ss_pred             EEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC-----------------
Confidence            9999998899999875432 4689999999999999999999999999999999999976554                 


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                                .++|+|||++......   .....+++.|+|||++.+. .++.++|||||||++|+|+||.+||.+....
T Consensus       139 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~  208 (285)
T cd07861         139 ----------VIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI  208 (285)
T ss_pred             ----------cEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence                      4555555554432211   1223568899999998764 4788999999999999999999999988777


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+.+..+......+........                   ....... ............+++++.+||.+||+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~  268 (285)
T cd07861         209 DQLFRIFRILGTPTEDVWPGVTSLPD-------------------YKNTFPK-WKKGSLRSAVKNLDEDGLDLLEKMLIY  268 (285)
T ss_pred             HHHHHHHHHhCCCChhhhhcchhhHH-------------------HHhhccc-cCcchhHHhcCCCCHHHHHHHHHHhcC
Confidence            66666666665554443322211100                   0000000 000011112345778899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 047395          408 DPSSRLTAHDALKHPFF  424 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f  424 (432)
                      ||++|||+.++++||||
T Consensus       269 dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         269 DPAKRISAKKALNHPYF  285 (285)
T ss_pred             ChhhCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=3.3e-45  Score=349.92  Aligned_cols=258  Identities=25%  Similarity=0.404  Sum_probs=202.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.++||+|+||+||++++..+++.||+|++.+..    .....+..|+.++..+.|     ++|+.+++.+...+.
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~~~~~   75 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN-----QWITTLHYAFQDENN   75 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCC-----CCEeeEEEEEecCCE
Confidence            46999999999999999999999999999999986422    222346667777776655     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++.+.. ..+++..++.++.||+.||.|||++||+||||||+|||++.                 
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~-----------------  137 (332)
T cd05623          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM-----------------  137 (332)
T ss_pred             EEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC-----------------
Confidence            99999999 999999998743 36899999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhC-----CCCCccchHHHHHHHHHHHHhCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                ++.++|+|||++......    ....+||+.|+|||++.+     ..++.++|||||||++|||++|+.|
T Consensus       138 ----------~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~P  207 (332)
T cd05623         138 ----------NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETP  207 (332)
T ss_pred             ----------CCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCC
Confidence                      455777777766542211    123579999999999963     4578999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...+..+....+.......                     .+|                       .....++..+.+|
T Consensus       208 f~~~~~~~~~~~i~~~~~~~---------------------~~p-----------------------~~~~~~s~~~~~l  243 (332)
T cd05623         208 FYAESLVETYGKIMNHKERF---------------------QFP-----------------------AQVTDVSEDAKDL  243 (332)
T ss_pred             CCCCCHHHHHHHHhCCCccc---------------------cCC-----------------------CccccCCHHHHHH
Confidence            98776655544432211000                     011                       0112456778999


Q ss_pred             HHHccccCCCC--CCCHHHHhcCCCCCCCcc
Q 047395          401 LQGLLRYDPSS--RLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       401 i~~~L~~dP~~--R~ta~elL~hp~f~~~~~  429 (432)
                      |.+||..++.+  |++++|+++||||++..+
T Consensus       244 i~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~  274 (332)
T cd05623         244 IRRLICSREHRLGQNGIEDFKQHPFFTGIDW  274 (332)
T ss_pred             HHHHccChhhhcCCCCHHHHhCCCCcCCCCH
Confidence            99999765554  689999999999987554

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=4.1e-45  Score=348.34  Aligned_cols=246  Identities=26%  Similarity=0.394  Sum_probs=194.8

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHH-HHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEID-VLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      +.||+|+||+||+|++..+++.||+|++.....    ....+..|.. +++.+.|     +||+++++++...+.+|+||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-----~~Iv~~~~~~~~~~~~~lv~   75 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH-----PFLVGLHFSFQTADKLYFVL   75 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCC-----CCCCceeEEEEcCCeEEEEE
Confidence            469999999999999999999999999975322    1122333333 2344444     99999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          176 EML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.                      
T Consensus        76 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~----------------------  131 (325)
T cd05602          76 DYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS----------------------  131 (325)
T ss_pred             eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC----------------------
Confidence            999 899999998754  6889999999999999999999999999999999999654                      


Q ss_pred             ccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA  331 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~  331 (432)
                           ++.++|+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...
T Consensus       132 -----~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  206 (325)
T cd05602         132 -----QGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD  206 (325)
T ss_pred             -----CCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHH
Confidence                 4456667777664321   12234579999999999999999999999999999999999999998776655444


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+.....                                                 .....++..+.++|.+||+.||.+
T Consensus       207 ~i~~~~~-------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~  237 (325)
T cd05602         207 NILNKPL-------------------------------------------------QLKPNITNSARHLLEGLLQKDRTK  237 (325)
T ss_pred             HHHhCCc-------------------------------------------------CCCCCCCHHHHHHHHHHcccCHHH
Confidence            3322100                                                 011245666889999999999999


Q ss_pred             CCCHH----HHhcCCCCCCCcc
Q 047395          412 RLTAH----DALKHPFFTRDYY  429 (432)
Q Consensus       412 R~ta~----elL~hp~f~~~~~  429 (432)
                      |+++.    ++++|+||....+
T Consensus       238 R~~~~~~~~~i~~~~~~~~~~~  259 (325)
T cd05602         238 RLGAKDDFMEIKNHIFFSPINW  259 (325)
T ss_pred             CCCCCCCHHHHhcCcccCCCCH
Confidence            99876    8999999976543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=4.3e-45  Score=348.94  Aligned_cols=258  Identities=24%  Similarity=0.391  Sum_probs=203.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||+||++++..+++.||+|++.+..    .....+..|+.++..+.|     ++|+.+++++...+.
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~l~~~~~~~~~   75 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDC-----QWITTLHYAFQDENY   75 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEEcCCE
Confidence            47999999999999999999999999999999987532    223346667777777665     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .|+||||+ |++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.                 
T Consensus        76 ~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~-----------------  137 (331)
T cd05624          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM-----------------  137 (331)
T ss_pred             EEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC-----------------
Confidence            99999999 999999998743 36899999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhC-----CCCCccchHHHHHHHHHHHHhCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                ++.+||+|||++.......    ...+||+.|+|||++.+     ..++.++|||||||++|+|++|+.|
T Consensus       138 ----------~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~P  207 (331)
T cd05624         138 ----------NGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP  207 (331)
T ss_pred             ----------CCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCC
Confidence                      4557777777765433221    22468999999999976     4578899999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...+..+....+......+                     .+|                       .....+++.+.+|
T Consensus       208 f~~~~~~~~~~~i~~~~~~~---------------------~~p-----------------------~~~~~~~~~~~~l  243 (331)
T cd05624         208 FYAESLVETYGKIMNHEERF---------------------QFP-----------------------SHITDVSEEAKDL  243 (331)
T ss_pred             ccCCCHHHHHHHHHcCCCcc---------------------cCC-----------------------CccccCCHHHHHH
Confidence            98766554443332211000                     000                       0112356678999


Q ss_pred             HHHccccCCCC--CCCHHHHhcCCCCCCCcc
Q 047395          401 LQGLLRYDPSS--RLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       401 i~~~L~~dP~~--R~ta~elL~hp~f~~~~~  429 (432)
                      |.+||..++.+  |++++++++||||+...+
T Consensus       244 i~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~  274 (331)
T cd05624         244 IQRLICSRERRLGQNGIEDFKKHAFFEGIDW  274 (331)
T ss_pred             HHHHccCchhhcCCCCHHHHhcCCCcCCCCH
Confidence            99999976654  569999999999987544

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-46  Score=343.14  Aligned_cols=261  Identities=27%  Similarity=0.451  Sum_probs=221.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +.|..-++||+||||.||-++-+.||+.+|+|.+.+.    .......++|..+|+++..     +.||.+--.|++.+.
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s-----~FiVslaYAfeTkd~  259 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSS-----PFIVSLAYAFETKDA  259 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc-----CcEEEEeeeecCCCc
Confidence            5688999999999999999999999999999988532    2344567889999999987     899999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||..| ||+|.-.|.+.+...|++..++.++.+|+.||++||+.+||.|||||+|||                    
T Consensus       260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNIL--------------------  319 (591)
T KOG0986|consen  260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENIL--------------------  319 (591)
T ss_pred             eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhhee--------------------
Confidence            99999999 999999998887778999999999999999999999999999999999999                    


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                             +|+.++++|+|+|+|.....  .....+||.+|||||++.+..|+...|.|||||+||||+.|+.||......
T Consensus       320 -------LDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK  392 (591)
T KOG0986|consen  320 -------LDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK  392 (591)
T ss_pred             -------eccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh
Confidence                   45566778888888776443  334458999999999999999999999999999999999999999876554


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .....+.+..-..+                                             ...++..|+++++|.+.+|+.
T Consensus       393 vk~eEvdrr~~~~~---------------------------------------------~ey~~kFS~eakslc~~LL~K  427 (591)
T KOG0986|consen  393 VKREEVDRRTLEDP---------------------------------------------EEYSDKFSEEAKSLCEGLLTK  427 (591)
T ss_pred             hhHHHHHHHHhcch---------------------------------------------hhcccccCHHHHHHHHHHHcc
Confidence            44333333222111                                             223456788899999999999


Q ss_pred             CCCCCC-----CHHHHhcCCCCCCCccCCC
Q 047395          408 DPSSRL-----TAHDALKHPFFTRDYYRRF  432 (432)
Q Consensus       408 dP~~R~-----ta~elL~hp~f~~~~~~~~  432 (432)
                      ||++|+     +++++.+||||+..+|+|+
T Consensus       428 dp~~RLGcrg~ga~evk~HpfFk~lnw~rl  457 (591)
T KOG0986|consen  428 DPEKRLGCRGEGAQEVKEHPFFKDLNWRRL  457 (591)
T ss_pred             CHHHhccCCCcCcchhhhCcccccCCHhHH
Confidence            999999     5889999999999998874

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=7.6e-45  Score=346.63  Aligned_cols=251  Identities=23%  Similarity=0.382  Sum_probs=196.8

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||+||+|++..+++.||+|+++...    .....+..|+.++..+.+    |++|+.+++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~----~~~i~~~~~~~~~~~~~~lv~e   76 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASS----NPFLVGLHSCFQTTSRLFLVIE   76 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcC----CCCEeeEEEEEEeCCEEEEEEe
Confidence            47999999999999999999999999997532    223456778888777743    4999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+                      
T Consensus        77 ~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~----------------------  132 (327)
T cd05617          77 YVNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDAD----------------------  132 (327)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCC----------------------
Confidence            99 999999987654  69999999999999999999999999999999999997554                      


Q ss_pred             cCCCCCCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH---H
Q 047395          256 RLPKSSAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE---H  329 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~---~  329 (432)
                           +.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.......   .
T Consensus       133 -----~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~  207 (327)
T cd05617         133 -----GHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNT  207 (327)
T ss_pred             -----CCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccccc
Confidence                 45677777766532   122234579999999999999999999999999999999999999996432110   0


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+.....                   ...                          ...+...+..+.++|.+||+.||
T Consensus       208 ~~~~~~~~~-------------------~~~--------------------------~~~p~~~~~~~~~li~~~L~~dP  242 (327)
T cd05617         208 EDYLFQVIL-------------------EKP--------------------------IRIPRFLSVKASHVLKGFLNKDP  242 (327)
T ss_pred             HHHHHHHHH-------------------hCC--------------------------CCCCCCCCHHHHHHHHHHhccCH
Confidence            000000000                   000                          01122355668899999999999


Q ss_pred             CCCCC------HHHHhcCCCCCCCcc
Q 047395          410 SSRLT------AHDALKHPFFTRDYY  429 (432)
Q Consensus       410 ~~R~t------a~elL~hp~f~~~~~  429 (432)
                      .+|++      ++++++||||+...+
T Consensus       243 ~~R~~~~~~~~~~~i~~h~~f~~~~~  268 (327)
T cd05617         243 KERLGCQPQTGFSDIKSHTFFRSIDW  268 (327)
T ss_pred             HHcCCCCCCCCHHHHHcCCCCCCCCH
Confidence            99998      469999999987654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.7e-45  Score=358.41  Aligned_cols=276  Identities=23%  Similarity=0.346  Sum_probs=201.0

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      ...|.+.+.||+|+||.||+|.+..+++.||||....     ....+|+++++.|.|     +||+++++++..++..|+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~H-----pnIv~l~~~~~~~~~~~l  237 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSH-----PAVLALLDVRVVGGLTCL  237 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCC-----CCCCcEEEEEEECCEEEE
Confidence            4579999999999999999999999999999996432     235689999999987     999999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          174 VFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       174 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||++.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+                    
T Consensus       238 v~e~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~--------------------  296 (461)
T PHA03211        238 VLPKYRSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGP--------------------  296 (461)
T ss_pred             EEEccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCC--------------------
Confidence            99999889999987653 369999999999999999999999999999999999997554                    


Q ss_pred             cccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC---
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE---  325 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~---  325 (432)
                             +.++|+|||+++.....     ....+||..|+|||++.+..++.++|||||||+||||++|..|+....   
T Consensus       297 -------~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~  369 (461)
T PHA03211        297 -------EDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGD  369 (461)
T ss_pred             -------CCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCccc
Confidence                   45666666665543211     123569999999999999999999999999999999999876553221   


Q ss_pred             ----cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCH--HHHHHh---hcCchhhhhhhhhcccchHH
Q 047395          326 ----NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSR--ESIKAV---LKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       326 ----~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~  396 (432)
                          ....+..+.+........                   ++......  ......   ...+......+......+..
T Consensus       370 ~~~~~~~~l~~~i~~~~~~~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (461)
T PHA03211        370 ERRPYDAQILRIIRQAQVHVDE-------------------FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLD  430 (461)
T ss_pred             ccCCcHHHHHHHHHhhcccccc-------------------CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccch
Confidence                112233332222111100                   00000000  000000   00000000000111134556


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      +.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       431 ~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        431 VEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            889999999999999999999999999975

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.1e-44  Score=338.99  Aligned_cols=257  Identities=24%  Similarity=0.390  Sum_probs=207.8

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .|++.+.||+|+||+||+|.+..+++.||+|++....    .....+.+|++++..+.|     ++++.+.+.+..++..
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~-----~~i~~~~~~~~~~~~~   75 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNS-----QFVVNLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCC-----cCceeEEEEEecCCEE
Confidence            3788899999999999999999999999999986432    223446779999998877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.                  
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~------------------  137 (285)
T cd05632          76 CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDD------------------  137 (285)
T ss_pred             EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECC------------------
Confidence            9999999 899999887655456999999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                               ++.++|+|||++......  .....|+..|+|||++.+..++.++|||||||++|+|++|..||.......
T Consensus       138 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~  208 (285)
T cd05632         138 ---------YGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV  208 (285)
T ss_pred             ---------CCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                     456777777776543221  223568999999999998889999999999999999999999998765543


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.........                                             .....++..+.+|+.+||+.|
T Consensus       209 ~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~li~~~l~~~  243 (285)
T cd05632         209 KREEVDRRVLETEE---------------------------------------------VYSAKFSEEAKSICKMLLTKD  243 (285)
T ss_pred             HHHHHHHhhhcccc---------------------------------------------ccCccCCHHHHHHHHHHccCC
Confidence            33332221111000                                             011234566889999999999


Q ss_pred             CCCCCC-----HHHHhcCCCCCCCcc
Q 047395          409 PSSRLT-----AHDALKHPFFTRDYY  429 (432)
Q Consensus       409 P~~R~t-----a~elL~hp~f~~~~~  429 (432)
                      |++|||     +.++++|+||++..+
T Consensus       244 P~~R~~~~~~~~~~l~~~~~~~~~~~  269 (285)
T cd05632         244 PKQRLGCQEEGAGEVKRHPFFRNMNF  269 (285)
T ss_pred             HhHcCCCcccChHHHHcChhhhcCCH
Confidence            999999     899999999988654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=6.7e-45  Score=346.33  Aligned_cols=246  Identities=27%  Similarity=0.391  Sum_probs=194.0

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHH-HHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEID-VLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      +.||+|+||.||+|++..+++.||+|++.+...    ....+..|.. +++.+.|     +||+++++++...+..|+||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-----~~iv~~~~~~~~~~~~~lv~   75 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKH-----PFLVGLHYSFQTAEKLYFVL   75 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCC-----CCccceeeEEEcCCEEEEEE
Confidence            469999999999999999999999999975322    2223444443 3455555     99999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          176 EML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ||+ +++|.+.+....  .+++..++.++.||+.||.|||++||+||||||+|||++.                      
T Consensus        76 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~----------------------  131 (321)
T cd05603          76 DYVNGGELFFHLQRER--CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDS----------------------  131 (321)
T ss_pred             cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC----------------------
Confidence            999 899999887654  6899999999999999999999999999999999999654                      


Q ss_pred             ccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA  331 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~  331 (432)
                           ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||...+......
T Consensus       132 -----~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  206 (321)
T cd05603         132 -----QGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYD  206 (321)
T ss_pred             -----CCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHH
Confidence                 4456677777655321   12233578999999999999889999999999999999999999998766544433


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+.....                                                 ..+...+..+.++|.+||+.||.+
T Consensus       207 ~i~~~~~-------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~  237 (321)
T cd05603         207 NILHKPL-------------------------------------------------QLPGGKTVAACDLLVGLLHKDQRR  237 (321)
T ss_pred             HHhcCCC-------------------------------------------------CCCCCCCHHHHHHHHHHccCCHhh
Confidence            3221100                                                 011234556889999999999999


Q ss_pred             CCCH----HHHhcCCCCCCCcc
Q 047395          412 RLTA----HDALKHPFFTRDYY  429 (432)
Q Consensus       412 R~ta----~elL~hp~f~~~~~  429 (432)
                      |+++    .++++|+||....+
T Consensus       238 R~~~~~~~~~~~~~~~~~~~~~  259 (321)
T cd05603         238 RLGAKADFLEIKNHVFFSPINW  259 (321)
T ss_pred             cCCCCCCHHHHhCCCCcCCCCH
Confidence            9975    59999999986443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=3.4e-45  Score=337.44  Aligned_cols=252  Identities=35%  Similarity=0.627  Sum_probs=203.4

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhH---hHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE---AAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~---~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      |++.+.||+|+||+||+|.+..+++.||+|++........   ...+|+.+++.++|     +||+++++++......++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~-----~~i~~~~~~~~~~~~~~~   75 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRH-----PNIVQILDVFQDDNYLYI   75 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTB-----TTBCHEEEEEEESSEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccc-----cccccccccccccccccc
Confidence            8899999999999999999999999999999986543332   33458999999976     999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      |||++ +++|.+++....  .+++..+..++.||+.||.+||++||+|+||||+||+++                     
T Consensus        76 v~~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~---------------------  132 (260)
T PF00069_consen   76 VMEYCPGGSLQDYLQKNK--PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD---------------------  132 (260)
T ss_dssp             EEEEETTEBHHHHHHHHS--SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES---------------------
T ss_pred             cccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccc---------------------
Confidence            99999 669999998443  699999999999999999999999999999999999965                     


Q ss_pred             ccccCCCCCCeEEeecCCccc---ccCCccccccCCCcchhHHHh-CCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAY---EHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                            .++.++|+|||.+..   .........+|..|+|||++. +..++.++||||||+++|+|++|..||......+
T Consensus       133 ------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~  206 (260)
T PF00069_consen  133 ------ENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD  206 (260)
T ss_dssp             ------TTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH
T ss_pred             ------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence                  455667777777653   222334457899999999998 7788999999999999999999999998774444


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.+........                                          ...........+.++|.+||+.|
T Consensus       207 ~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~l~~li~~~l~~~  244 (260)
T PF00069_consen  207 QLEIIEKILKRPLPS------------------------------------------SSQQSREKSEELRDLIKKMLSKD  244 (260)
T ss_dssp             HHHHHHHHHHTHHHH------------------------------------------HTTSHTTSHHHHHHHHHHHSSSS
T ss_pred             hhhhhhhcccccccc------------------------------------------cccccchhHHHHHHHHHHHccCC
Confidence            444333322111100                                          00001122366899999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 047395          409 PSSRLTAHDALKHPFF  424 (432)
Q Consensus       409 P~~R~ta~elL~hp~f  424 (432)
                      |++|||+.++++||||
T Consensus       245 p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  245 PEQRPSAEELLKHPWF  260 (260)
T ss_dssp             GGGSTTHHHHHTSGGG
T ss_pred             hhHCcCHHHHhcCCCC
Confidence            9999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-45  Score=350.74  Aligned_cols=246  Identities=27%  Similarity=0.427  Sum_probs=192.9

Q ss_pred             eecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       103 lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      ||+|+||+||+|++..+++.||||++.....    .......|..++..+.  ...|++|+.+++++...+.+|+||||+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~~p~i~~~~~~~~~~~~~~lv~e~~   78 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTL--LDESPFIVGLKFSFQTDSDLYLVTDYM   78 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhc--cCCCCcCcceEEEEecCCeEEEEEcCC
Confidence            7999999999999999999999999864322    1122334555554442  123599999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccC
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL  257 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  257 (432)
                       +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.                         
T Consensus        79 ~~g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~-------------------------  131 (330)
T cd05586          79 SGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA-------------------------  131 (330)
T ss_pred             CCChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC-------------------------
Confidence             999999998754  6999999999999999999999999999999999999654                         


Q ss_pred             CCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 047395          258 PKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM  333 (432)
Q Consensus       258 ~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i  333 (432)
                        ++.++|+|||++....   ......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+
T Consensus       132 --~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i  209 (330)
T cd05586         132 --TGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNI  209 (330)
T ss_pred             --CCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHH
Confidence              4456777777665421   122345799999999999765 4789999999999999999999999876655444333


Q ss_pred             HHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCC
Q 047395          334 ERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRL  413 (432)
Q Consensus       334 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~  413 (432)
                      ......+                       +                         ...+++.+.+||.+||+.||.+||
T Consensus       210 ~~~~~~~-----------------------~-------------------------~~~~~~~~~~li~~~L~~~P~~R~  241 (330)
T cd05586         210 AFGKVRF-----------------------P-------------------------KNVLSDEGRQFVKGLLNRNPQHRL  241 (330)
T ss_pred             HcCCCCC-----------------------C-------------------------CccCCHHHHHHHHHHcCCCHHHCC
Confidence            2111111                       0                         012456688999999999999998


Q ss_pred             ----CHHHHhcCCCCCCC
Q 047395          414 ----TAHDALKHPFFTRD  427 (432)
Q Consensus       414 ----ta~elL~hp~f~~~  427 (432)
                          ++.++++||||...
T Consensus       242 ~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         242 GAHRDAVELKEHPFFADI  259 (330)
T ss_pred             CCCCCHHHHhcCccccCC
Confidence                79999999999764

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=9.6e-45  Score=337.99  Aligned_cols=251  Identities=24%  Similarity=0.405  Sum_probs=197.7

Q ss_pred             eecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          103 IGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       103 lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      ||+|+||.||++++..+|+.||+|.+....    ........|+++++.+.|     +||++++++++.+.++|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~h-----p~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS-----PFIVNLAYAFESKTHLCLVMSLM   75 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCC-----CcEEEEEEEEecCCeEEEEEecC
Confidence            799999999999999999999999986422    123345568899988877     99999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccC
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL  257 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  257 (432)
                       |++|.+++.......+++..+..++.||+.||+|||+.||+||||||+|||++.                         
T Consensus        76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~-------------------------  130 (277)
T cd05607          76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDD-------------------------  130 (277)
T ss_pred             CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcC-------------------------
Confidence             999999987665556899999999999999999999999999999999999654                         


Q ss_pred             CCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Q 047395          258 PKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER  335 (432)
Q Consensus       258 ~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~  335 (432)
                        ++.++|+|||++.......  ....||..|+|||++.+..++.++|||||||++|+|++|..||...........+..
T Consensus       131 --~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~  208 (277)
T cd05607         131 --QGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR  208 (277)
T ss_pred             --CCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH
Confidence              4456777777665433221  234689999999999998899999999999999999999999976433211111110


Q ss_pred             -HhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCC
Q 047395          336 -VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLT  414 (432)
Q Consensus       336 -~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~t  414 (432)
                       .....                    .                         ......+++++.+||.+||+.||++||+
T Consensus       209 ~~~~~~--------------------~-------------------------~~~~~~~~~~~~~li~~~L~~~P~~R~~  243 (277)
T cd05607         209 RTLEDE--------------------V-------------------------KFEHQNFTEESKDICRLFLAKKPEDRLG  243 (277)
T ss_pred             Hhhccc--------------------c-------------------------ccccccCCHHHHHHHHHHhccCHhhCCC
Confidence             00000                    0                         0001235667899999999999999999


Q ss_pred             H----HHHhcCCCCCCCccC
Q 047395          415 A----HDALKHPFFTRDYYR  430 (432)
Q Consensus       415 a----~elL~hp~f~~~~~~  430 (432)
                      +    +++++||||+...++
T Consensus       244 ~~~~~~~~~~h~~f~~~~~~  263 (277)
T cd05607         244 SREKNDDPRKHEFFKTINFP  263 (277)
T ss_pred             CccchhhhhcChhhcCCCHH
Confidence            9    778899999886554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.4e-44  Score=361.32  Aligned_cols=255  Identities=24%  Similarity=0.276  Sum_probs=203.2

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ...++|++.+.||+|+||+||+|++..+++.||||+++..   ......+.+|+.++..+.|     +|++++++.+...
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h-----~~iv~~~~~~~~~  103 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDF-----FSIVKCHEDFAKK  103 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCC-----CcEEEeecceecc
Confidence            3457999999999999999999999999999999998643   2334456778887777665     9999988776432


Q ss_pred             C--------eEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccc
Q 047395          169 N--------HICIVFEML-GPSLYDFLRKNN--YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLK  237 (432)
Q Consensus       169 ~--------~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  237 (432)
                      .        .+++||||+ +|+|.+++....  ...+++..+..++.||+.||.|||++||+||||||+|||++.     
T Consensus       104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~-----  178 (496)
T PTZ00283        104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS-----  178 (496)
T ss_pred             cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC-----
Confidence            1        478999999 999999997532  246899999999999999999999999999999999999654     


Q ss_pred             cCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCCCCccchHHHHHHHHH
Q 047395          238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI  312 (432)
Q Consensus       238 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~  312 (432)
                                            ++.+||+|||+++....     .....+||+.|+|||++.+..++.++|||||||++|
T Consensus       179 ----------------------~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvily  236 (496)
T PTZ00283        179 ----------------------NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLY  236 (496)
T ss_pred             ----------------------CCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHH
Confidence                                  44577777776654321     123457999999999999989999999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhccc
Q 047395          313 ELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH  392 (432)
Q Consensus       313 elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (432)
                      ||++|+.||.+.+..+....+.....                                                ...+..
T Consensus       237 eLltG~~Pf~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~  268 (496)
T PTZ00283        237 ELLTLKRPFDGENMEEVMHKTLAGRY------------------------------------------------DPLPPS  268 (496)
T ss_pred             HHHHCCCCCCCCCHHHHHHHHhcCCC------------------------------------------------CCCCCC
Confidence            99999999987665444333211100                                                001124


Q ss_pred             chHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       393 ~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      +++.+.+||.+||+.||.+|||+.++++|||++.
T Consensus       269 ~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        269 ISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            5667899999999999999999999999999764

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=6.7e-45  Score=347.22  Aligned_cols=302  Identities=20%  Similarity=0.273  Sum_probs=206.0

Q ss_pred             EEeeeecc--cceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           99 ILRKIGEG--TFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        99 i~~~lg~G--~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      ++++||+|  +|++||++.+..+|+.||+|.++..   ......+.+|+.+++.++|     +||+++++++..++..|+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h-----pniv~~~~~~~~~~~~~l   76 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNH-----PNIVPYRATFIADNELWV   76 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCC-----CCeeeEEEEEEECCEEEE
Confidence            56789999  7899999999999999999998743   2334567789999988877     999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+++.||+...       
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~-------  149 (327)
T cd08227          77 VTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL-------  149 (327)
T ss_pred             EEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhh-------
Confidence            99999 8999999976544469999999999999999999999999999999999999887777777765432       


Q ss_pred             ccccCCCCCCeEEeecCCccc-ccCCccccccCCCcchhHHHhC--CCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAY-EHQEHNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~-~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                                 .+.++|.... .........++..|+|||++.+  ..++.++|||||||++|||++|..||........
T Consensus       150 -----------~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  218 (327)
T cd08227         150 -----------SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM  218 (327)
T ss_pred             -----------ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH
Confidence                       1122221111 0111122356788999999976  3588999999999999999999999986554332


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhc-cCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVR-RGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....  ..+..+... .......+.... .....+........... .................+++.+.+||.+||+.|
T Consensus       219 ~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  294 (327)
T cd08227         219 LLEK--LNGTVPCLL-DTTTIPAEELTMKPSRSGANSGLGESTTVS-TPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRN  294 (327)
T ss_pred             HHHH--hcCCccccc-cccchhhhhcccCCcccCCcCCCCcccccC-CcCccccCCcccccccccCHHHHHHHHHHHhhC
Confidence            2221  222222110 000000000000 00000000000000000 000000000111122345778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~  427 (432)
                      |++|||++|+++||||++-
T Consensus       295 P~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         295 PDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             chhcCCHHHHhcChhhhhc
Confidence            9999999999999999763

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-48  Score=335.75  Aligned_cols=253  Identities=26%  Similarity=0.448  Sum_probs=209.3

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      +-|.++++||+|+||.||+|.++++|+.+|||.+.-. .....+.+|+.++++.+.     +++|++++.|-....+|+|
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-sDLQEIIKEISIMQQC~S-----~yVVKYYGSYFK~sDLWIV  106 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-TDLQEIIKEISIMQQCKS-----KYVVKYYGSYFKHSDLWIV  106 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-chHHHHHHHHHHHHHcCC-----chhhhhhhhhccCCceEee
Confidence            4588999999999999999999999999999998643 344567889999999887     9999999998888899999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||| .|+..++++..+ +++++.++..+++.-+.||+|||...-||||||..|||++.+|+.|++|||++         
T Consensus       107 MEYCGAGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVA---------  176 (502)
T KOG0574|consen  107 MEYCGAGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVA---------  176 (502)
T ss_pred             hhhcCCCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhcccc---------
Confidence            9999 799999998765 58999999999999999999999999999999999999777666555555554         


Q ss_pred             cccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL  330 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~  330 (432)
                                        ....   ...++.+|||.|||||++..-.|+.++||||||++..||..|++||........+
T Consensus       177 ------------------GQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI  238 (502)
T KOG0574|consen  177 ------------------GQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI  238 (502)
T ss_pred             ------------------chhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee
Confidence                              3322   2345678999999999999999999999999999999999999999765443221


Q ss_pred             HHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCC
Q 047395          331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPS  410 (432)
Q Consensus       331 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  410 (432)
                      .+|   .-.+|+.                                           ...+..+++++.|||++||..+|+
T Consensus       239 FMI---PT~PPPT-------------------------------------------F~KPE~WS~~F~DFi~~CLiK~PE  272 (502)
T KOG0574|consen  239 FMI---PTKPPPT-------------------------------------------FKKPEEWSSEFNDFIRSCLIKKPE  272 (502)
T ss_pred             Eec---cCCCCCC-------------------------------------------CCChHhhhhHHHHHHHHHhcCCHH
Confidence            111   1111110                                           111345678899999999999999


Q ss_pred             CCCCHHHHhcCCCCCCC
Q 047395          411 SRLTAHDALKHPFFTRD  427 (432)
Q Consensus       411 ~R~ta~elL~hp~f~~~  427 (432)
                      +|-||.++++|||+++.
T Consensus       273 ~R~TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  273 ERKTALRLCEHTFIKNA  289 (502)
T ss_pred             HHHHHHHHhhhhhhcCC
Confidence            99999999999999864

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.5e-44  Score=371.18  Aligned_cols=276  Identities=27%  Similarity=0.434  Sum_probs=213.7

Q ss_pred             ecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc
Q 047395           88 ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW  164 (432)
Q Consensus        88 ~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~  164 (432)
                      ..++...++|++++.||.|+||+||+|.+..+++.||+|++...   ......+..|+.++..|.|     +||++++++
T Consensus         6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~H-----PNIVrl~d~   80 (1021)
T PTZ00266          6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKH-----KNIVRYIDR   80 (1021)
T ss_pred             cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCC-----CCcCeEEEE
Confidence            44667778999999999999999999999999999999998642   3345678889999999987     999999998


Q ss_pred             ccc--CCeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC-------CcEeccCCCCcEEeec
Q 047395          165 FDY--RNHICIVFEML-GPSLYDFLRKNN--YRPFPVDLVREIGRQLLECVAFMHDL-------RLIHTDLKPENILFVS  232 (432)
Q Consensus       165 ~~~--~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-------~ivHrDlkp~NIli~~  232 (432)
                      |..  ...+||||||+ +++|.++|....  ...+++..++.|+.||+.||.|||+.       +||||||||+||||..
T Consensus        81 f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s  160 (1021)
T PTZ00266         81 FLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST  160 (1021)
T ss_pred             EEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence            743  46799999999 899999997531  23699999999999999999999984       4999999999999975


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCC--CCCccchHHHHH
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGL--GWSYPCDMWSVG  308 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlG  308 (432)
                      ... .+.+....         ....+....+||+|||++......  ....+||+.|+|||++.+.  .++.++||||||
T Consensus       161 ~~~-~lg~i~~~---------~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG  230 (1021)
T PTZ00266        161 GIR-HIGKITAQ---------ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALG  230 (1021)
T ss_pred             Ccc-cccccccc---------ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHH
Confidence            321 11100000         001234567999999998764332  2345799999999999653  488999999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhh
Q 047395          309 CILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ  388 (432)
Q Consensus       309 vil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (432)
                      ||||+|++|..||...+....+.........+|                                               
T Consensus       231 ~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp-----------------------------------------------  263 (1021)
T PTZ00266        231 CIIYELCSGKTPFHKANNFSQLISELKRGPDLP-----------------------------------------------  263 (1021)
T ss_pred             HHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC-----------------------------------------------
Confidence            999999999999986655443322211110000                                               


Q ss_pred             hcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       389 ~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                       ....+..+.+||..||+.+|.+|||+.|+|.||||+.
T Consensus       264 -i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~  300 (1021)
T PTZ00266        264 -IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN  300 (1021)
T ss_pred             -cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence             0123556889999999999999999999999999974

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2e-44  Score=360.05  Aligned_cols=253  Identities=22%  Similarity=0.255  Sum_probs=205.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCC-CcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRET-GETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~-~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ...|.+.+.||+|+||.||+|.+..+ ++.||+|.+... ......+.+|+.++..+.|     +||+++++++...+.+
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~H-----pniv~~~~~~~~~~~~  140 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDH-----FGIVKHFDDFKSDDKL  140 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCC-----CCEeEEEEEEEECCEE
Confidence            34599999999999999999998877 788999976532 2334466789999998877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          172 CIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ||||||+ +++|.+++...  ...++++..+..++.||+.||.|||++||+||||||+|||++.                
T Consensus       141 ~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~----------------  204 (478)
T PTZ00267        141 LLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMP----------------  204 (478)
T ss_pred             EEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECC----------------
Confidence            9999999 99999988642  2246899999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                 .+.+||+|||++......     ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus       205 -----------~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~  273 (478)
T PTZ00267        205 -----------TGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKG  273 (478)
T ss_pred             -----------CCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence                       456777777776653322     2345799999999999998999999999999999999999999987


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+..+.+..+......                                                ..+..++..+.+||.+
T Consensus       274 ~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~s~~~~~li~~  305 (478)
T PTZ00267        274 PSQREIMQQVLYGKYD------------------------------------------------PFPCPVSSGMKALLDP  305 (478)
T ss_pred             CCHHHHHHHHHhCCCC------------------------------------------------CCCccCCHHHHHHHHH
Confidence            6655444333221100                                                0012345668899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCC
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ||..||++|||+.+++.|||++.
T Consensus       306 ~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        306 LLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             HhccChhhCcCHHHHHhCHHHHH
Confidence            99999999999999999999863

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-46  Score=356.38  Aligned_cols=255  Identities=26%  Similarity=0.468  Sum_probs=212.8

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEee-chhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .+-|.|+..||.|+||.||+|..+.++-..|.|++. +.....+.++.||+||..+.|     |+||++++.|...+.++
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdH-----P~ivkLl~ayy~enkLw  105 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDH-----PVIVKLLSAYYFENKLW  105 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCC-----hHHHHHHHHHhccCceE
Confidence            456899999999999999999999999999999986 344556789999999998877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |+.||| ||-...++-..+ +.+++.++..+++|++.||.|||+++|||||||..|||++-+                  
T Consensus       106 iliEFC~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld------------------  166 (1187)
T KOG0579|consen  106 ILIEFCGGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD------------------  166 (1187)
T ss_pred             EEEeecCCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec------------------
Confidence            999999 777877777665 579999999999999999999999999999999999997654                  


Q ss_pred             cccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhC-----CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                               +.++|+|||.+....   .....++|||+|||||+...     .+|+.++||||||++|.||..+.+|-..
T Consensus       167 ---------GdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe  237 (1187)
T KOG0579|consen  167 ---------GDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE  237 (1187)
T ss_pred             ---------CcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc
Confidence                     456666776654322   23456899999999999863     5799999999999999999999999988


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+.+.++..|.+.-+  | .+                                           ..+..++..+.|||.+
T Consensus       238 lnpMRVllKiaKSeP--P-TL-------------------------------------------lqPS~Ws~~F~DfLk~  271 (1187)
T KOG0579|consen  238 LNPMRVLLKIAKSEP--P-TL-------------------------------------------LQPSHWSRSFSDFLKR  271 (1187)
T ss_pred             cchHHHHHHHhhcCC--C-cc-------------------------------------------cCcchhhhHHHHHHHH
Confidence            777766655533211  1 10                                           1123456668999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||..||..||++.|+|+||||++.
T Consensus       272 cL~Knp~~Rp~aaqll~Hpfv~~~  295 (1187)
T KOG0579|consen  272 CLVKNPRNRPPAAQLLKHPFVQNA  295 (1187)
T ss_pred             HHhcCCccCCCHHHHhhCcccccC
Confidence            999999999999999999999864

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=4.1e-44  Score=336.04  Aligned_cols=251  Identities=26%  Similarity=0.469  Sum_probs=210.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....    ...+.+.+|+++++.+.|     +||+++++++..++.
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~   75 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH-----PFLVNLYGSFQDDSN   75 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-----CCccceeeEEEcCCe
Confidence            46999999999999999999999999999999986532    334567789999988876     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+|+||+|+|||++.                 
T Consensus        76 ~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~-----------------  136 (290)
T cd05580          76 LYLVMEYVPGGELFSHLRKSG--RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDS-----------------  136 (290)
T ss_pred             EEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC-----------------
Confidence            99999999 999999998764  6999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                                ++.++|+|||++...........|++.|+|||.+.+..++.++||||||+++|+|++|..||...+....
T Consensus       137 ----------~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  206 (290)
T cd05580         137 ----------DGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI  206 (290)
T ss_pred             ----------CCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                      4567778888776655555556789999999999888889999999999999999999999987664433


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+.....++                                                 +...+..+.++|.+||+.||
T Consensus       207 ~~~~~~~~~~~-------------------------------------------------~~~~~~~l~~li~~~l~~~p  237 (290)
T cd05580         207 YEKILEGKVRF-------------------------------------------------PSFFSPDAKDLIRNLLQVDL  237 (290)
T ss_pred             HHHHhcCCccC-------------------------------------------------CccCCHHHHHHHHHHccCCH
Confidence            33332111111                                                 11235568899999999999


Q ss_pred             CCCC-----CHHHHhcCCCCCCCc
Q 047395          410 SSRL-----TAHDALKHPFFTRDY  428 (432)
Q Consensus       410 ~~R~-----ta~elL~hp~f~~~~  428 (432)
                      .+|+     +++|+++||||+...
T Consensus       238 ~~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         238 TKRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             HHccCcccCCHHHHHcCcccccCC
Confidence            9999     999999999998754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-44  Score=334.73  Aligned_cols=278  Identities=30%  Similarity=0.483  Sum_probs=210.7

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++.+.||.|++|.||+|.+..+++.||||.+....  .....+.+|+++++.++|     +||+++++++...+..|
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~~~   79 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKH-----ANIVTLHDIIHTKKTLT   79 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCC-----cceeeEEEEEecCCeEE
Confidence            67999999999999999999999899999999986432  223446679999999987     99999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++                  
T Consensus        80 lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~------------------  140 (291)
T cd07844          80 LVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG------------------  140 (291)
T ss_pred             EEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC------------------
Confidence            999999779999988754 3689999999999999999999999999999999999976544                  


Q ss_pred             ccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCC-cH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE-NL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~-~~  327 (432)
                               .++|+|||.+.....   ......++..|+|||++.+ ..++.++|||||||++|+|++|..||.... ..
T Consensus       141 ---------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~  211 (291)
T cd07844         141 ---------ELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE  211 (291)
T ss_pred             ---------CEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence                     456666665543221   1122346788999999876 457899999999999999999999997665 45


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch--HHHHHHHHHcc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA--GYLIDLLQGLL  405 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~li~~~L  405 (432)
                      +....+.+..+.+....+..............    +.  .....+             .......+  ..+.++|.+||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~-------------~~~~~~~~~~~~~~~li~~~L  272 (291)
T cd07844         212 DQLHKIFRVLGTPTEETWPGVSSNPEFKPYSF----PF--YPPRPL-------------INHAPRLDRIPHGEELALKFL  272 (291)
T ss_pred             HHHHHHHHhcCCCChhhhhhhhhccccccccc----cc--cCChhH-------------HHhCcCCCCchhHHHHHHHHh
Confidence            55666666666655544443332211111000    00  000000             01111222  56889999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f  424 (432)
                      +.||++|||+.++++||||
T Consensus       273 ~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         273 QYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ccCcccccCHHHHhcCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.2e-45  Score=343.41  Aligned_cols=253  Identities=27%  Similarity=0.457  Sum_probs=200.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEee---chhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ..|+++++||+||.+.||++... +.+.||+|.+.   .+......+..|+..|.+|+.    +.+||++++|-..++.+
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg----~~~IIqL~DYEv~d~~l  435 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKG----HDKIIQLYDYEVTDGYL  435 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcC----CceEEEEeeeeccCceE
Confidence            46999999999999999999854 34566777654   233445678999999999986    48999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |+||||-..+|..+|++... .++.-.++.+..||+.|+.++|.+||||.||||+|+|+.                    
T Consensus       436 YmvmE~Gd~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV--------------------  494 (677)
T KOG0596|consen  436 YMVMECGDIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV--------------------  494 (677)
T ss_pred             EEEeecccccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE--------------------
Confidence            99999999999999998763 344348999999999999999999999999999999975                    


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCccc-----cccCCCcchhHHHhCCC-----------CCccchHHHHHHHHHHHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEHNY-----IVSTRHYRAPEVILGLG-----------WSYPCDMWSVGCILIELC  315 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~-----------~~~~sDiwSlGvil~ell  315 (432)
                              .+.+||+|||+|.......+.     -+||+.||+||.+....           .+.+|||||||||||+|+
T Consensus       495 --------kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv  566 (677)
T KOG0596|consen  495 --------KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMV  566 (677)
T ss_pred             --------eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHH
Confidence                    367999999999876655443     48999999999996432           568899999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchH
Q 047395          316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG  395 (432)
Q Consensus       316 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (432)
                      .|+.||....  ..++.+..+..+                  .....+|....                         ..
T Consensus       567 YgktPf~~~~--n~~aKl~aI~~P------------------~~~Iefp~~~~-------------------------~~  601 (677)
T KOG0596|consen  567 YGKTPFGQII--NQIAKLHAITDP------------------NHEIEFPDIPE-------------------------ND  601 (677)
T ss_pred             hcCCchHHHH--HHHHHHHhhcCC------------------CccccccCCCC-------------------------ch
Confidence            9999997432  122222222111                  01112222111                         11


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          396 YLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       396 ~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ++.++++.||++||.+|||+.++|+|||++-
T Consensus       602 ~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  602 ELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             HHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            2789999999999999999999999999975

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=7.1e-44  Score=333.53  Aligned_cols=278  Identities=37%  Similarity=0.630  Sum_probs=217.9

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.+.||.|+||.||+|.+..+|+.||+|++....   .....+.+|+.+++.+.|     +|++++++++..+...+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~~~~~~~   75 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQH-----PYVVKLLDVFPHGSGFV   75 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCC-----CCCcceeeEEecCCeeE
Confidence            5899999999999999999999999999999987432   234568889999888876     99999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +||||++++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.                    
T Consensus        76 ~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~--------------------  134 (286)
T cd07832          76 LVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA--------------------  134 (286)
T ss_pred             EEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC--------------------
Confidence            999999999999997654 46999999999999999999999999999999999999654                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                             ++.++|+|||.+......    .....|+..|+|||++.+. .++.++|||||||++|+|++|.+||.+.++.
T Consensus       135 -------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~  207 (286)
T cd07832         135 -------DGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI  207 (286)
T ss_pred             -------CCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH
Confidence                   445667777766543322    2335688999999998754 4689999999999999999999999888887


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      ..+..+....+.+....+.........    ....++......               .....+..+..+.+||++||..
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---------------~~~~~~~~~~~~~~li~~~l~~  268 (286)
T cd07832         208 EQLAIVFRTLGTPNEETWPGLTSLPDY----NKITFPESKPIP---------------LEEIFPDASPEALDLLKGLLVY  268 (286)
T ss_pred             HHHHHHHHHcCCCChHHHhhccCcchh----hcccCCCCCcch---------------HHHhCCCccHHHHHHHHHHhcc
Confidence            777777777766555443332211100    011111110000               0112234567799999999999


Q ss_pred             CCCCCCCHHHHhcCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~  425 (432)
                      ||++|||++++|+||||.
T Consensus       269 ~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         269 DPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             ChhhCCCHHHHhhCcCcC
Confidence            999999999999999995

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2.2e-44  Score=334.61  Aligned_cols=254  Identities=24%  Similarity=0.409  Sum_probs=200.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-----
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-----  167 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-----  167 (432)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++.........+..|+.++..+.+    |+|++++++++..     
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~----h~~i~~~~~~~~~~~~~~   79 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH----HRNIATYYGAFIKKNPPG   79 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcC----CCCeeeEeeEEeecCCCC
Confidence            4578999999999999999999999999999999997655555677889988888742    3999999998764     


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          168 -RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       168 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                       ...+|+||||+ +++|.+++.......+++..+..++.|++.||+|||+++|+|+||||+||+++.             
T Consensus        80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~-------------  146 (272)
T cd06637          80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE-------------  146 (272)
T ss_pred             CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC-------------
Confidence             24689999999 889999998755456899999999999999999999999999999999999654             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhC-----CCCCccchHHHHHHHHHHHHhC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvil~elltg  317 (432)
                                    ++.++|+|||++.....   ......|+..|+|||++.+     ..++.++|||||||++|+|++|
T Consensus       147 --------------~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g  212 (272)
T cd06637         147 --------------NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG  212 (272)
T ss_pred             --------------CCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhC
Confidence                          44566777776654321   2233568999999999863     3578899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ..||...........+.....                                               .......++..+
T Consensus       213 ~~p~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~  245 (272)
T cd06637         213 APPLCDMHPMRALFLIPRNPA-----------------------------------------------PRLKSKKWSKKF  245 (272)
T ss_pred             CCCccccCHHHHHHHHhcCCC-----------------------------------------------CCCCCCCcCHHH
Confidence            999975443322211100000                                               000012345568


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      .+||.+||..||.+|||+.++++||||
T Consensus       246 ~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         246 QSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            899999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-46  Score=329.12  Aligned_cols=253  Identities=27%  Similarity=0.481  Sum_probs=214.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      -++|..+++||+|.||+|.+++.+.+++.+|+|++++.    +.....-..|-++|+..+|     |.+..+.-.|+..+
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~H-----PFLt~LKYsFQt~d  241 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRH-----PFLTSLKYSFQTQD  241 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccC-----cHHHHhhhhhccCc
Confidence            46799999999999999999999999999999999753    2233345678888888877     99988888899999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ++|+||||. ||.|+-.|.+..  .+++..++.+...|+.||.|||+++||.||||.+|+|+                  
T Consensus       242 rlCFVMeyanGGeLf~HLsrer--~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL------------------  301 (516)
T KOG0690|consen  242 RLCFVMEYANGGELFFHLSRER--VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL------------------  301 (516)
T ss_pred             eEEEEEEEccCceEeeehhhhh--cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee------------------
Confidence            999999999 999998887754  79999999999999999999999999999999999995                  


Q ss_pred             CCccccccCCCCCCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                               +.++++||+|||+++..   +....++||||.|+|||++....|+.++|.|.+||++|||++|+.||...+
T Consensus       302 ---------DkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d  372 (516)
T KOG0690|consen  302 ---------DKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD  372 (516)
T ss_pred             ---------ccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc
Confidence                     45556666666666542   334567899999999999999999999999999999999999999999877


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .......|.-.--.+                                                 +..++++++.||..+|
T Consensus       373 h~kLFeLIl~ed~kF-------------------------------------------------Pr~ls~eAktLLsGLL  403 (516)
T KOG0690|consen  373 HEKLFELILMEDLKF-------------------------------------------------PRTLSPEAKTLLSGLL  403 (516)
T ss_pred             hhHHHHHHHhhhccC-------------------------------------------------CccCCHHHHHHHHHHh
Confidence            766555543321111                                                 2356778999999999


Q ss_pred             ccCCCCCC-----CHHHHhcCCCCCCCcc
Q 047395          406 RYDPSSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       406 ~~dP~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      ..||.+|+     .|.|+.+|+||....|
T Consensus       404 ~kdP~kRLGgGpdDakEi~~h~FF~~v~W  432 (516)
T KOG0690|consen  404 KKDPKKRLGGGPDDAKEIMRHRFFASVDW  432 (516)
T ss_pred             hcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence            99999999     4899999999998766

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=8.9e-44  Score=335.05  Aligned_cols=280  Identities=29%  Similarity=0.470  Sum_probs=215.0

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh------hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK------YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      +|++.+.||.|+||.||+|.+..+++.||||.++....      ....+..|+.++..++|     +||+++++++...+
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-----~~i~~~~~~~~~~~   75 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH-----PNIIGLLDVFGHKS   75 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCC-----CCChhhhheeecCC
Confidence            58899999999999999999999999999999974322      23456678888888876     99999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          170 HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       170 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      ..++||||++++|.+++.... ..+++..+..++.||++||.|||++||+|+||||+|||++.+                
T Consensus        76 ~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~----------------  138 (298)
T cd07841          76 NINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASD----------------  138 (298)
T ss_pred             EEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCC----------------
Confidence            999999999999999997654 369999999999999999999999999999999999997654                


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                 +.++|+|||++......   .....+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+
T Consensus       139 -----------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~  207 (298)
T cd07841         139 -----------GVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS  207 (298)
T ss_pred             -----------CCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc
Confidence                       45666666655443221   122356788999999865 357899999999999999999999998888


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+.+..+....+.+....+.................                     ..........+..+.+||.+||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~li~~~l  266 (298)
T cd07841         208 DIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPP---------------------TPLKQIFPAASDDALDLLQRLL  266 (298)
T ss_pred             cHHHHHHHHHHcCCCchhhhhhcccccccccccccCC---------------------cchhhhcccccHHHHHHHHHHh
Confidence            7777777666655544433332211110000000000                     0001112345677899999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          406 RYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ++||++|||+.|+++||||++..-
T Consensus       267 ~~~P~~R~s~~e~l~~~~~~~~~~  290 (298)
T cd07841         267 TLNPNKRITARQALEHPYFSNDPA  290 (298)
T ss_pred             cCCcccCcCHHHHhhCccccCCCC
Confidence            999999999999999999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=7.5e-44  Score=337.34  Aligned_cols=284  Identities=29%  Similarity=0.466  Sum_probs=216.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh---hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC--
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR--  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~--  168 (432)
                      .++|++.+.||.|+||.||+|.+..+|+.||+|+++....   ......+|+.+++.++|     +|++++++++...  
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~   80 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRH-----PNIVELKEVVVGKHL   80 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCC-----CCCcceEEEEecCCC
Confidence            4679999999999999999999999999999999864322   12345679999999887     9999999988654  


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          169 NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       169 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      +.+++||||++++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||+++.++              
T Consensus        81 ~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--------------  145 (309)
T cd07845          81 DSIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG--------------  145 (309)
T ss_pred             CeEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--------------
Confidence            5789999999889999988653 4699999999999999999999999999999999999976544              


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                   .++|+|||.+......   .....++..|+|||++.+ ..++.++|||||||++|+|++|.+||...
T Consensus       146 -------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~  212 (309)
T cd07845         146 -------------CLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK  212 (309)
T ss_pred             -------------CEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence                         5566666655443321   122345788999999876 45789999999999999999999999998


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+.+..+....+..+..+++.......    ......+....              . .........++.+.+||.+|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--------------~-~~~~~~~~~~~~~~~li~~m  273 (309)
T cd07845         213 SEIEQLDLIIQLLGTPNESIWPGFSDLPL----VGKFTLPKQPY--------------N-NLKHKFPWLSEAGLRLLNFL  273 (309)
T ss_pred             CHHHHHHHHHHhcCCCChhhchhhhcccc----cccccccCCCC--------------C-chHHhccccCHHHHHHHHHH
Confidence            88888888888877665554433221110    00000000000              0 00011223467789999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          405 LRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      |++||++|||++|+++||||++...
T Consensus       274 l~~dp~~R~t~~~il~h~~f~~~~~  298 (309)
T cd07845         274 LMYDPKKRATAEEALESSYFKEKPL  298 (309)
T ss_pred             hcCChhhCcCHHHHhcChhhccCCC
Confidence            9999999999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5e-44  Score=339.64  Aligned_cols=283  Identities=24%  Similarity=0.394  Sum_probs=215.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||.|+||.||+|.+..+++.||+|.+....    .....+..|++++..+.|     ++|+++++.+...+.
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~   75 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH-----PFLPTLYASFQTETY   75 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCC-----CCchhheeeeecCCE
Confidence            36999999999999999999999999999999986432    233467788888888876     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .|+||||+ +++|.+++.......+++..++.++.||+.||+|||+.|++|+||||+||+++.++.+++.|||++.....
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  155 (316)
T cd05574          76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV  155 (316)
T ss_pred             EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence            99999999 99999999876545799999999999999999999999999999999999999888888888887654322


Q ss_pred             CccccccCCCCCC-----eE-EeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          250 DVNYYKRLPKSSA-----IK-VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       250 ~~~~~~~~~~~~~-----~k-l~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                      .............     .+ ...+ ............+||..|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~  234 (316)
T cd05574         156 EPPPVSKALRKGSRRSSVNSIPSET-FSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKG  234 (316)
T ss_pred             cccccccccccccccccccccchhh-hcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCC
Confidence            2110000000000     00 0000 000011112335789999999999998899999999999999999999999987


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+....+..+......                       ++                        .....+..+.++|.+
T Consensus       235 ~~~~~~~~~~~~~~~~-----------------------~~------------------------~~~~~~~~~~~li~~  267 (316)
T cd05574         235 SNRDETFSNILKKEVT-----------------------FP------------------------GSPPVSSSARDLIRK  267 (316)
T ss_pred             CchHHHHHHHhcCCcc-----------------------CC------------------------CccccCHHHHHHHHH
Confidence            6655443332211000                       00                        011245668999999


Q ss_pred             ccccCCCCCCC----HHHHhcCCCCCCCccC
Q 047395          404 LLRYDPSSRLT----AHDALKHPFFTRDYYR  430 (432)
Q Consensus       404 ~L~~dP~~R~t----a~elL~hp~f~~~~~~  430 (432)
                      ||+.||++|||    ++|+|+||||++-.+.
T Consensus       268 ~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~  298 (316)
T cd05574         268 LLVKDPSKRLGSKRGAAEIKQHPFFRGVNWA  298 (316)
T ss_pred             HccCCHhHCCCchhhHHHHHcCchhhcCChh
Confidence            99999999999    9999999999886543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.7e-44  Score=360.32  Aligned_cols=294  Identities=21%  Similarity=0.302  Sum_probs=202.2

Q ss_pred             eecCceecCceEEEeeeecccceEEEEEEecCCC-cEEEEE------------------EeechhhhhHhHHHHHHHHHH
Q 047395           87 FALGENLTSRYKILRKIGEGTFGQVLDCLDRETG-ETVAIK------------------VVRSIKKYREAAMTEIDVLEL  147 (432)
Q Consensus        87 ~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~-~~vaiK------------------~~~~~~~~~~~~~~E~~~l~~  147 (432)
                      +..++.+.++|+++++||+|+||+||+|..+... ..+++|                  .++........+.+|+.++..
T Consensus       140 ~~~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~  219 (501)
T PHA03210        140 LKHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGR  219 (501)
T ss_pred             cccchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHh
Confidence            3445667789999999999999999998764322 222222                  222222334567889999999


Q ss_pred             HHhcCCCCCceeEeecccccCCeEEEEEccCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCC
Q 047395          148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNY---RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLK  224 (432)
Q Consensus       148 l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  224 (432)
                      +.|     +||+++++++...+..|+|+|+++++|.+++.....   .......++.++.||+.||.|||++||+|||||
T Consensus       220 l~H-----pnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLK  294 (501)
T PHA03210        220 LNH-----ENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIK  294 (501)
T ss_pred             CCC-----CCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            887     999999999999999999999998899998865321   123466788899999999999999999999999


Q ss_pred             CCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCc
Q 047395          225 PENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSY  300 (432)
Q Consensus       225 p~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~  300 (432)
                      |+|||++.                           ++.+||+|||++......    ....+||..|+|||++.+..++.
T Consensus       295 P~NILl~~---------------------------~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  347 (501)
T PHA03210        295 LENIFLNC---------------------------DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCE  347 (501)
T ss_pred             HHHEEECC---------------------------CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCc
Confidence            99999654                           456777777777654322    12357999999999999999999


Q ss_pred             cchHHHHHHHHHHHHhCCCC-CCCC--CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhh
Q 047395          301 PCDMWSVGCILIELCSGEAL-FQTH--ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL  377 (432)
Q Consensus       301 ~sDiwSlGvil~elltg~~p-f~~~--~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (432)
                      ++|||||||++|||++|..+ |...  .....+..+....+.....+.... .....++...  .+....          
T Consensus       348 ~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~i~~~--~~~~~~----------  414 (501)
T PHA03210        348 ITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPP-CKLFDYIDSA--EIDHAG----------  414 (501)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcH-HHHHHHhhhh--hcccCc----------
Confidence            99999999999999998764 4322  223334444333332221110000 0000000000  000000          


Q ss_pred             cCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          378 KLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                        .....+..  ....+..+.++|.+||++||.+||||.|+|+||||.....
T Consensus       415 --~~~~~~~~--~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~  462 (501)
T PHA03210        415 --HSVPPLIR--NLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEE  462 (501)
T ss_pred             --cchhhHHH--hcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCc
Confidence              00000100  1134566889999999999999999999999999987543

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-44  Score=341.78  Aligned_cols=282  Identities=29%  Similarity=0.514  Sum_probs=213.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC--
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR--  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~--  168 (432)
                      +.++|++.+.||+|+||.||+|++..+|+.||||+++..  ......+.+|+.+++.++|     +||+++++++...  
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~~~   77 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKH-----ENIIGILDIIRPPSF   77 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCC-----CCcCchhheeecccc
Confidence            457899999999999999999999999999999998632  2334567789999998876     9999999876533  


Q ss_pred             ---CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          169 ---NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       169 ---~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                         ...|+|+||++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.++.+         
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~---------  145 (336)
T cd07849          78 ESFNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDL---------  145 (336)
T ss_pred             cccceEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCE---------
Confidence               468999999988999888654   49999999999999999999999999999999999997665554         


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC------CccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ------EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~  318 (432)
                                        +|+|||++.....      ......||..|+|||++.+ ..++.++|||||||++|+|++|+
T Consensus       146 ------------------kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~  207 (336)
T cd07849         146 ------------------KICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR  207 (336)
T ss_pred             ------------------EECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                              5555554433211      1122468899999998765 46889999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcch-hhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAE-KFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      .||.+.+.......+...++..+............ .+....    +.              ...... ....+..+..+
T Consensus       208 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--------------~~~~~~-~~~~~~~~~~~  268 (336)
T cd07849         208 PLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSL----PF--------------KPKVPW-NKLFPNADPKA  268 (336)
T ss_pred             CCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhc----Cc--------------CCcccH-HHHhcccCcHH
Confidence            99998887777777777777665544333221111 010000    00              000000 01123456779


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .+||.+||+.||++|||+.|+++||||.+..
T Consensus       269 ~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         269 LDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             HHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            9999999999999999999999999998643

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=7.2e-44  Score=333.29  Aligned_cols=277  Identities=33%  Similarity=0.529  Sum_probs=214.5

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.+.||.|++|.||+|++..+++.||||.++...   .....+.+|+++++.++|     +||+++++++...+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~~~   75 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH-----PNIVKLLDVIHTENKLY   75 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCC-----CCCcchhhhcccCCcEE
Confidence            4899999999999999999999999999999886432   223467789999999987     99999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +||||+.++|.+++.......+++..++.++.||+.||+|||++|++|+||+|+||+++.                    
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~--------------------  135 (284)
T cd07860          76 LVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--------------------  135 (284)
T ss_pred             EEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--------------------
Confidence            999999779999998765557899999999999999999999999999999999999654                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                             ++.++|+|||.+......   .....++..|+|||++.+.. ++.++|||||||++|+|+||+.||.+.+..+
T Consensus       136 -------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~  208 (284)
T cd07860         136 -------EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID  208 (284)
T ss_pred             -------CCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                   445666677665443221   12235688899999887654 5889999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.+..+..+...+...........     .++..              . ..........++..++++|.+||+.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--------------~-~~~~~~~~~~~~~~~~~li~~~l~~~  268 (284)
T cd07860         209 QLFRIFRTLGTPDEVVWPGVTSLPDYKP-----SFPKW--------------A-RQDFSKVVPPLDEDGRDLLSQMLHYD  268 (284)
T ss_pred             HHHHHHHHhCCCChhhhhhhhHHHHHHh-----hcccc--------------c-ccCHHHHcccCCHHHHHHHHHhcCCC
Confidence            7777777777665543332111100000     00000              0 00001112345677899999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 047395          409 PSSRLTAHDALKHPFF  424 (432)
Q Consensus       409 P~~R~ta~elL~hp~f  424 (432)
                      |++|||++++++||||
T Consensus       269 P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         269 PNKRISAKAALAHPFF  284 (284)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.8e-43  Score=329.48  Aligned_cols=278  Identities=32%  Similarity=0.583  Sum_probs=210.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|++.+.||+|+||.||+|++..+++.||+|++....   .....+.+|+.++..+.|     +|++++++++......
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h-----~~i~~~~~~~~~~~~~   75 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKH-----PNLVNLIEVFRRKRKL   75 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCC-----CCEeeeeeEEeeCCEE
Confidence            47999999999999999999999999999999986432   223456789999998877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      ++||||+ +++|..++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.+                 
T Consensus        76 ~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~-----------------  136 (286)
T cd07847          76 HLVFEYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQ-----------------  136 (286)
T ss_pred             EEEEeccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCC-----------------
Confidence            9999999 66666665443  358999999999999999999999999999999999997554                 


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                +.++|+|||++.......   ....++..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.
T Consensus       137 ----------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~  206 (286)
T cd07847         137 ----------GQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSD  206 (286)
T ss_pred             ----------CcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCCh
Confidence                      456666666655433221   23457888999999876 4578999999999999999999999998887


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+....+....+.............  .+...-....+....                ......+..+..+.+||.+||+
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~li~~~l~  268 (286)
T cd07847         207 VDQLYLIRKTLGDLIPRHQQIFSTN--QFFKGLSIPEPETRE----------------PLESKFPNISSPALSFLKGCLQ  268 (286)
T ss_pred             HHHHHHHHHHhCCCChHHhhhcccc--cccccccCCCccccc----------------CHHHHhccCCHHHHHHHHHHhc
Confidence            7777777766665544322111100  000000000000000                0011123457779999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 047395          407 YDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f  424 (432)
                      .||++|||+.|++.||||
T Consensus       269 ~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         269 MDPTERLSCEELLEHPYF  286 (286)
T ss_pred             CCccccCCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.9e-43  Score=339.19  Aligned_cols=281  Identities=30%  Similarity=0.567  Sum_probs=222.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      +.++|++.+.||+|+||.||+|.+..++..||||++...   ......+.+|+.+++.+.|     +||+++++++....
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~   87 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKH-----ENVIGLLDVFTPDL   87 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCC-----CCccceeeeecCCc
Confidence            567899999999999999999999999999999998532   2234567789999999987     99999999887543


Q ss_pred             ------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          170 ------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       170 ------~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                            .+++||||++++|.+++...   .+++..++.++.||+.||.|||+.||+||||||+||+++            
T Consensus        88 ~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~------------  152 (343)
T cd07880          88 SLDRFHDFYLVMPFMGTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN------------  152 (343)
T ss_pred             cccccceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc------------
Confidence                  46999999999999988753   599999999999999999999999999999999999964            


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                     .++.++|+|||++...........+++.|+|||++.+ ..++.++|+|||||++|+|++|..||.
T Consensus       153 ---------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~  217 (343)
T cd07880         153 ---------------EDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFK  217 (343)
T ss_pred             ---------------CCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence                           3456788888877665554455577899999999976 357899999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhh-hhhhhhcccchHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ-NLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li  401 (432)
                      ..+.......+....+..+..+...+.........                .   ..+... .........++..+.++|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~---~~~~~~~~~~~~~~~~~~~~~~~li  278 (343)
T cd07880         218 GHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYV----------------K---KLPRFRKKDFRSLLPNANPLAVNVL  278 (343)
T ss_pred             CCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHH----------------H---hccccCcchHHHhccCCChHHHHHH
Confidence            88877777777777777776665554332111000                0   000000 011122345677899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .+||+.||++|||+.++++||||+..
T Consensus       279 ~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         279 EKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             HHHcCCChhhCCCHHHHhcCccHhhh
Confidence            99999999999999999999999764

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=2.7e-43  Score=331.28  Aligned_cols=280  Identities=34%  Similarity=0.554  Sum_probs=210.7

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh---hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe-
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH-  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~-  170 (432)
                      ++|++.+.||+|+||.||+|.+..+++.||||+++....   ....+.+|+.++..+.+    |+|++++++++..... 
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~----~~~i~~~~~~~~~~~~~   76 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSE----SIYIVRLLDVEHVEEKN   76 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccC----CCCccceeeeEeecCCC
Confidence            469999999999999999999999999999998864322   23467789999988864    3899999998876554 


Q ss_pred             ----EEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          171 ----ICIVFEMLGPSLYDFLRKNN---YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       171 ----~~lv~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                          .|+||||+.++|.+++....   ...+++..++.++.||+.||.|||++||+||||||+||+++.           
T Consensus        77 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~-----------  145 (295)
T cd07837          77 GKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK-----------  145 (295)
T ss_pred             CCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec-----------
Confidence                89999999779999987643   235899999999999999999999999999999999999754           


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~  319 (432)
                                     .++.++|+|||.+......   .....+++.|+|||++.+. .++.++|||||||++|+|++|..
T Consensus       146 ---------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~  210 (295)
T cd07837         146 ---------------QKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQP  210 (295)
T ss_pred             ---------------CCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCC
Confidence                           1456777777776543221   1223568889999998764 57899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.+.......+....+..+...+..........      ..+..               .........+.++..+.+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---------------~~~~~~~~~~~~~~~~~~  269 (295)
T cd07837         211 LFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWH------EFPQW---------------KPQDLSRAVPDLSPEGLD  269 (295)
T ss_pred             CCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchh------hcCcc---------------cchhHHHhccccCHHHHH
Confidence            999887777666666555444332221111100000      00000               000111122456778999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~  425 (432)
                      ||.+||..||.+|||++|+++||||+
T Consensus       270 ~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         270 LLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HHHHHccCChhhcCCHHHHhcCCCcC
Confidence            99999999999999999999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=1.1e-43  Score=335.85  Aligned_cols=288  Identities=25%  Similarity=0.380  Sum_probs=207.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++.+.||+|+||.||+|.+..++..+|+|.++..  ......+.+|++++..++|     +||+++++.+..++.+|
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~~   75 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNS-----PYIVGFYGAFYSDGEIS   75 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCC-----CCCCeEEEEEeeCCEEE
Confidence            3699999999999999999999999999999998643  2334567889999998877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +||||+ +++|.+++....  .+++..+..++.||+.||.|||+ .+|+|+||||+|||++.++                
T Consensus        76 lv~ey~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~----------------  137 (308)
T cd06615          76 ICMEHMDGGSLDQVLKKAG--RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG----------------  137 (308)
T ss_pred             EEeeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC----------------
Confidence            999999 899999998764  68999999999999999999997 6999999999999976544                


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                                 .++|+|||++..... .....+|+..|+|||++.+..++.++|||||||++|+|++|..||...+....
T Consensus       138 -----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~  206 (308)
T cd06615         138 -----------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL  206 (308)
T ss_pred             -----------cEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH
Confidence                       456666665543221 12345789999999999888899999999999999999999999976553332


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+    ...+.........   .-......+.+......+..........    .......++.++.+||.+||..||
T Consensus       207 ~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~P  275 (308)
T cd06615         207 EAMF----GRPVSEGEAKESH---RPVSGHPPDSPRPMAIFELLDYIVNEPP----PKLPSGAFSDEFQDFVDKCLKKNP  275 (308)
T ss_pred             HHhh----cCccccccccCCc---ccccCCCCCccchhhHHHHHHHHhcCCC----ccCcCcccCHHHHHHHHHHccCCh
Confidence            2221    1111100000000   0000000000000000000000000000    000012356779999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 047395          410 SSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       410 ~~R~ta~elL~hp~f~~~  427 (432)
                      ++|||+.|+++||||.+.
T Consensus       276 ~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         276 KERADLKELTKHPFIKRA  293 (308)
T ss_pred             hhCcCHHHHhcChhhhhc
Confidence            999999999999999874

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-43  Score=327.64  Aligned_cols=249  Identities=27%  Similarity=0.426  Sum_probs=201.3

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh------hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      +.|++.+.||+|++|.||+|.+..+++.||+|.+....      .....+.+|+.++..+.|     +||+++++++...
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~   76 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH-----ERIVQYYGCLRDD   76 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCC-----CCeeeeEEEEccC
Confidence            46899999999999999999999999999999986321      123457788888888876     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      ...++|+||+ +++|.+++....  .+++..+..++.|++.||.|||+.||+||||||+||+++.+              
T Consensus        77 ~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~--------------  140 (263)
T cd06625          77 ETLSIFMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSA--------------  140 (263)
T ss_pred             CeEEEEEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--------------
Confidence            9999999999 899999998764  68999999999999999999999999999999999996544              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                   +.++|+|||.+......      .....|+..|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus       141 -------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~  207 (263)
T cd06625         141 -------------GNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPW  207 (263)
T ss_pred             -------------CCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCc
Confidence                         45666666665432211      12345788999999999988999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ...+.......+......                                               ......++..+.++|
T Consensus       208 ~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~li  240 (263)
T cd06625         208 AEFEAMAAIFKIATQPTN-----------------------------------------------PQLPSHVSPDARNFL  240 (263)
T ss_pred             cccchHHHHHHHhccCCC-----------------------------------------------CCCCccCCHHHHHHH
Confidence            765443332221110000                                               011123456688999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      .+||..+|.+|||+.|+++||||
T Consensus       241 ~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         241 RRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHhhcCcccCCCHHHHhhCCCC
Confidence            99999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=8e-44  Score=341.46  Aligned_cols=248  Identities=21%  Similarity=0.340  Sum_probs=190.4

Q ss_pred             cCceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeeccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~  165 (432)
                      .++|++.++||+|+||.||+|.+.     .+++.||||+++..  ......+.+|+.++..+ .|     +||+++++++
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~niv~~~~~~   80 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNH-----LNVVNLLGAC   80 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccC-----cceeeEEeEe
Confidence            468999999999999999999752     44578999998643  23345688899999988 45     9999999987


Q ss_pred             ccC-CeEEEEEccC-CCCHHHHHHhcC-----------------------------------------------------
Q 047395          166 DYR-NHICIVFEML-GPSLYDFLRKNN-----------------------------------------------------  190 (432)
Q Consensus       166 ~~~-~~~~lv~e~~-~~~L~~~l~~~~-----------------------------------------------------  190 (432)
                      ... ..+++||||+ +|+|.+++....                                                     
T Consensus        81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T cd05102          81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP  160 (338)
T ss_pred             cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence            654 5689999999 999999997532                                                     


Q ss_pred             -------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCe
Q 047395          191 -------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI  263 (432)
Q Consensus       191 -------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~  263 (432)
                             ..++++..+..++.||+.||.|||++||+||||||+|||++.+                           +.+
T Consensus       161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~---------------------------~~~  213 (338)
T cd05102         161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSEN---------------------------NVV  213 (338)
T ss_pred             hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCC---------------------------CcE
Confidence                   1247788999999999999999999999999999999997554                           456


Q ss_pred             EEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHh
Q 047395          264 KVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMERVL  337 (432)
Q Consensus       264 kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~  337 (432)
                      ||+|||+++.....     .....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+........ 
T Consensus       214 kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-  292 (338)
T cd05102         214 KICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-  292 (338)
T ss_pred             EEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-
Confidence            66666665532211     112345678999999999899999999999999999997 99999865433222111000 


Q ss_pred             CCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHH
Q 047395          338 GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHD  417 (432)
Q Consensus       338 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~e  417 (432)
                      +..                                              ...+..+++.+.+||.+||+.||++|||+.|
T Consensus       293 ~~~----------------------------------------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~e  326 (338)
T cd05102         293 GTR----------------------------------------------MRAPENATPEIYRIMLACWQGDPKERPTFSA  326 (338)
T ss_pred             CCC----------------------------------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence            000                                              0011234566889999999999999999999


Q ss_pred             Hhc
Q 047395          418 ALK  420 (432)
Q Consensus       418 lL~  420 (432)
                      +++
T Consensus       327 l~~  329 (338)
T cd05102         327 LVE  329 (338)
T ss_pred             HHH
Confidence            985

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.9e-43  Score=339.37  Aligned_cols=284  Identities=27%  Similarity=0.508  Sum_probs=223.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.++|++.+.||+|++|.||+|++..+++.||||++...   ......+.+|+.+++.+.|     +|++++++++...
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~   86 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDH-----ENVIGLLDVFTPA   86 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccC-----CCHHHHHHHhhcc
Confidence            3567899999999999999999999999999999998642   2334556789999998877     9999999887655


Q ss_pred             Ce------EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          169 NH------ICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       169 ~~------~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      +.      .|+|+||++++|.+++...   .+++..++.++.||+.||.|||+.||+||||||+||+++.          
T Consensus        87 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~----------  153 (343)
T cd07851          87 SSLEDFQDVYLVTHLMGADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE----------  153 (343)
T ss_pred             ccccccccEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC----------
Confidence            44      8999999999999999764   5999999999999999999999999999999999999654          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                       ++.++|+|||.+...........+|..|+|||.+.+. .++.++|||||||++|+|++|+.||
T Consensus       154 -----------------~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf  216 (343)
T cd07851         154 -----------------DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLF  216 (343)
T ss_pred             -----------------CCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence                             4567777777776554444556788999999998763 5789999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcch-hhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAE-KFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      .+.+....+..+....+.+++.+......... .+....                  ...... .........+..+.+|
T Consensus       217 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~-~~~~~~~~~s~~l~dl  277 (343)
T cd07851         217 PGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSL------------------PQMPKK-DFKEVFSGANPLAIDL  277 (343)
T ss_pred             CCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhc------------------cccCCC-CHHHHhccCCHHHHHH
Confidence            98888888888888777777666554432111 000000                  000000 0011112347789999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      |.+||+.||++|||+.++++||||.+...
T Consensus       278 i~~~l~~~P~~Rpt~~ell~h~~~~~~~~  306 (343)
T cd07851         278 LEKMLVLDPDKRITAAEALAHPYLAEYHD  306 (343)
T ss_pred             HHHhCCCChhhCCCHHHHhcCCCccccCC
Confidence            99999999999999999999999987543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=3.8e-43  Score=323.40  Aligned_cols=249  Identities=24%  Similarity=0.417  Sum_probs=200.2

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-CCeE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-RNHI  171 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-~~~~  171 (432)
                      .|++.+.||.|++|.||++.+..+++.||+|.+....   ...+.+.+|+++++.++|     +|++++++.+.. ...+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~   75 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKH-----PNIVAYRESWEGEDGLL   75 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCC-----CCeeeeeeeecCCCCEE
Confidence            4899999999999999999999999999999986432   334467788888888877     999999988764 4578


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|.+++.......+++.+++.++.|++.||.+||++||+|+||||+||+++.+                 
T Consensus        76 ~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~-----------------  138 (257)
T cd08223          76 YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRT-----------------  138 (257)
T ss_pred             EEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecC-----------------
Confidence            9999999 8999999987554568999999999999999999999999999999999997554                 


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                                +.++|+|||++.....   ......+++.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus       139 ----------~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~  208 (257)
T cd08223         139 ----------NIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN  208 (257)
T ss_pred             ----------CcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH
Confidence                      4566666666543321   122346789999999999988999999999999999999999999866544


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .....+...  ..+                                              ......++.+.++|.+||+.
T Consensus       209 ~~~~~~~~~--~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~  240 (257)
T cd08223         209 SLVYRIIEG--KLP----------------------------------------------PMPKDYSPELGELIATMLSK  240 (257)
T ss_pred             HHHHHHHhc--CCC----------------------------------------------CCccccCHHHHHHHHHHhcc
Confidence            333222111  000                                              00123456688999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 047395          408 DPSSRLTAHDALKHPFF  424 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f  424 (432)
                      ||++|||+.++++||||
T Consensus       241 ~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         241 RPEKRPSVKSILRQPYI  257 (257)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-45  Score=348.30  Aligned_cols=254  Identities=26%  Similarity=0.401  Sum_probs=215.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec----hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ...|.-++.||.|+||.||-|++..+.+.||||.+.-    ......++..|+..|..|+|     ||++.+.++|-.+.
T Consensus        25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~H-----PntieYkgCyLre~   99 (948)
T KOG0577|consen   25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRH-----PNTIEYKGCYLREH   99 (948)
T ss_pred             HHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccC-----CCcccccceeeccc
Confidence            4568889999999999999999999999999999852    22334578899999999998     99999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          170 HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       170 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      ..|||||||-|+-.|++.... +++.+.++..|..+.+.||.|||+++.||||||..|||+.                  
T Consensus       100 TaWLVMEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs------------------  160 (948)
T KOG0577|consen  100 TAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS------------------  160 (948)
T ss_pred             hHHHHHHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec------------------
Confidence            999999999888888887665 5799999999999999999999999999999999999954                  


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC---CCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                               ..+.|||+|||.|.... +...++|||+|||||++..   +.|+-++||||||+++.||.-.++|+-..+.
T Consensus       161 ---------e~g~VKLaDFGSAsi~~-PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA  230 (948)
T KOG0577|consen  161 ---------EPGLVKLADFGSASIMA-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  230 (948)
T ss_pred             ---------CCCeeeeccccchhhcC-chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH
Confidence                     55678888888776543 3456899999999999974   4699999999999999999999999987776


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      +..+..|...-.|.-                                               ....+++.+++|+..||+
T Consensus       231 MSALYHIAQNesPtL-----------------------------------------------qs~eWS~~F~~Fvd~CLq  263 (948)
T KOG0577|consen  231 MSALYHIAQNESPTL-----------------------------------------------QSNEWSDYFRNFVDSCLQ  263 (948)
T ss_pred             HHHHHHHHhcCCCCC-----------------------------------------------CCchhHHHHHHHHHHHHh
Confidence            666555533211110                                               124678889999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCc
Q 047395          407 YDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .-|.+|||.+++|.|+|.....
T Consensus       264 KipqeRptse~ll~H~fv~R~R  285 (948)
T KOG0577|consen  264 KIPQERPTSEELLKHRFVLRER  285 (948)
T ss_pred             hCcccCCcHHHHhhcchhccCC
Confidence            9999999999999999997653

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.4e-43  Score=330.99  Aligned_cols=254  Identities=26%  Similarity=0.448  Sum_probs=201.6

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc------
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD------  166 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~------  166 (432)
                      ..+.|++.+.||.|+||.||+|.+..+++.||+|++.........+..|+.++..+.+    |+|++++++++.      
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~----h~~i~~~~~~~~~~~~~~   89 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSH----HRNIATYYGAFIKKSPPG   89 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcC----CCcEEEEeeehhcccccC
Confidence            3568999999999999999999999999999999987655555667788888888742    399999999875      


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      ....+|++|||+ +++|.+++.......+++..+..++.||+.||.|||+.||+|+||||+||+++.             
T Consensus        90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~-------------  156 (282)
T cd06636          90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTE-------------  156 (282)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-------------
Confidence            346899999999 889999998765556899999999999999999999999999999999999654             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHh-----CCCCCccchHHHHHHHHHHHHhC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvil~elltg  317 (432)
                                    .+.++|+|||++.....   ......|+..|+|||++.     +..++.++|||||||++|+|++|
T Consensus       157 --------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g  222 (282)
T cd06636         157 --------------NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG  222 (282)
T ss_pred             --------------CCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhC
Confidence                          44577777776654322   223356899999999986     34578899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ..||...........+...   .+.                   .                         .....++..+
T Consensus       223 ~~p~~~~~~~~~~~~~~~~---~~~-------------------~-------------------------~~~~~~~~~~  255 (282)
T cd06636         223 APPLCDMHPMRALFLIPRN---PPP-------------------K-------------------------LKSKKWSKKF  255 (282)
T ss_pred             CCCccccCHHhhhhhHhhC---CCC-------------------C-------------------------CcccccCHHH
Confidence            9999765433222111100   000                   0                         0012345668


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      .+||.+||..||.+|||+.|+|+||||
T Consensus       256 ~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         256 IDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=3.9e-43  Score=329.55  Aligned_cols=281  Identities=29%  Similarity=0.442  Sum_probs=209.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .++|++.+.||+|+||.||+|.+..+++.||+|+++...  .....+.+|+.+++.+.|     +||+++++++..++..
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~ni~~~~~~~~~~~~~   78 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH-----ANIVLLHDIIHTKETL   78 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCC-----CCEeEEEEEEecCCeE
Confidence            467999999999999999999999999999999986432  222356789999998877     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |+||||++++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+|||++.                   
T Consensus        79 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~-------------------  138 (291)
T cd07870          79 TFVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY-------------------  138 (291)
T ss_pred             EEEEecccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC-------------------
Confidence            9999999888888876543 35788999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCc-
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN-  326 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~-  326 (432)
                              ++.++|+|||++......   .....++..|+|||++.+. .++.++|||||||++|+|++|..||...+. 
T Consensus       139 --------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~  210 (291)
T cd07870         139 --------LGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV  210 (291)
T ss_pred             --------CCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH
Confidence                    445677777766542221   2234578899999998764 478899999999999999999999986554 


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+.+..+....+.++......................+.               ... ..... -..+..+.++|.+||+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-~~~~~-~~~~~~~~~ll~~~l~  273 (291)
T cd07870         211 FEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQ---------------QLR-VVWKR-LSRPPKAEDLASQMLM  273 (291)
T ss_pred             HHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCc---------------chh-hhccc-cCCChHHHHHHHHHhC
Confidence            355555555566555444333221111000000000000               000 00000 1124568899999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 047395          407 YDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f  424 (432)
                      .||++|||++|++.||||
T Consensus       274 ~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         274 MFPKDRISAQDALLHPYF  291 (291)
T ss_pred             cCcccCcCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.6e-43  Score=337.63  Aligned_cols=282  Identities=29%  Similarity=0.544  Sum_probs=217.1

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC-
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR-  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~-  168 (432)
                      +..+|++.+.||+|+||+||+|++..+++.||||.++..   ......+.+|+.++..+.|     +||+++++++... 
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~ni~~~~~~~~~~~   77 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDH-----ENVIAIKDIMPPPH   77 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCC-----CCccchHHheeccc
Confidence            456899999999999999999999999999999998642   2233456678888888876     9999999987643 


Q ss_pred             ----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          169 ----NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       169 ----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                          ...|+|+||++++|.+++....  .+++..+..++.||+.||.|||+++++||||||+||+++.+           
T Consensus        78 ~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~-----------  144 (337)
T cd07858          78 REAFNDVYIVYELMDTDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-----------  144 (337)
T ss_pred             ccccCcEEEEEeCCCCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC-----------
Confidence                3589999999889999997654  69999999999999999999999999999999999997554           


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                      +.++|+|||++......   .....++..|+|||.+.+ ..++.++|||||||++|+|++|..|
T Consensus       145 ----------------~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p  208 (337)
T cd07858         145 ----------------CDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPL  208 (337)
T ss_pred             ----------------CCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCC
Confidence                            45666666665543221   123467889999999875 4588999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcc-hhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPA-EKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      |.+.+.......+....+.++...+....... .++.                 +....... . ......+.++..+.+
T Consensus       209 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~-~-~~~~~~~~~~~~~~~  269 (337)
T cd07858         209 FPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYI-----------------RSLPYTPR-Q-SFARLFPHANPLAID  269 (337)
T ss_pred             CCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHH-----------------HhcCcccc-c-CHHHHcccCCHHHHH
Confidence            99888777888888888777655432221110 0000                 00000000 0 001122456788999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||++||+.||++|||++++++||||...
T Consensus       270 li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         270 LLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             HHHHHhcCChhhccCHHHHHcCcchhhh
Confidence            9999999999999999999999999763

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=4e-43  Score=332.33  Aligned_cols=281  Identities=30%  Similarity=0.530  Sum_probs=211.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC--
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR--  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~--  168 (432)
                      .++|++.++||+|+||.||+|.+..+++.||||.+....   .......+|+.+++.++|     +||+++++++...  
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~~~   85 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKH-----ENVVNLIEICRTKAT   85 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCC-----CCccceEEEEecccc
Confidence            357999999999999999999999999999999886422   223345679999998887     9999999887543  


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          169 ------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       169 ------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                            ...++||||++++|.+++.... ..+++.+++.++.||+.||.|||++||+|+||||+||+++.++.+      
T Consensus        86 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~------  158 (310)
T cd07865          86 PYNRYKGSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGIL------  158 (310)
T ss_pred             cccCCCceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcE------
Confidence                  3569999999889999887653 358999999999999999999999999999999999997665544      


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccC-------CccccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHH
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-------EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIEL  314 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~el  314 (432)
                                           +|+|||.+.....       ......++..|+|||++.+.. ++.++||||||+++|+|
T Consensus       159 ---------------------kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el  217 (310)
T cd07865         159 ---------------------KLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEM  217 (310)
T ss_pred             ---------------------EECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHH
Confidence                                 5555554432211       112245788899999987653 68899999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          315 CSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       315 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      ++|..||.+.+.......+....+.++....+....... +   .....+....  .....           .......+
T Consensus       218 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~--~~~~~-----------~l~~~~~~  280 (310)
T cd07865         218 WTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLEL-F---KKMELPQGQK--RKVKE-----------RLKPYVKD  280 (310)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhh-h---hhccCCCccc--hhhHH-----------hcccccCC
Confidence            999999998888888888888888877765444321110 0   0001111000  00000           00011234


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      ..+.+||.+||..||++|||++|+|+||||
T Consensus       281 ~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         281 PHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             HHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            567899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.4e-43  Score=336.97  Aligned_cols=282  Identities=27%  Similarity=0.527  Sum_probs=219.9

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|+++...   ...+.+.+|+.++..++|     +||+++++++...
T Consensus        14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h-----~~iv~~~~~~~~~   88 (345)
T cd07877          14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH-----ENVIGLLDVFTPA   88 (345)
T ss_pred             hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCC-----Ccccceeeeeeec
Confidence            45689999999999999999999999999999999986422   234567789999998877     9999999887532


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          169 ------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       169 ------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                            ...|+++++++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+||+++.          
T Consensus        89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~----------  155 (345)
T cd07877          89 RSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE----------  155 (345)
T ss_pred             ccccccccEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC----------
Confidence                  457899999999999988654   4899999999999999999999999999999999999654          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                       ++.++|+|||++...........+|..|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus       156 -----------------~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf  218 (345)
T cd07877         156 -----------------DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF  218 (345)
T ss_pred             -----------------CCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                             455777777776655544445678899999999876 46789999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ...+.......+.+..+..+..+.............                ......+..  .........++.+.+||
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~--~~~~~~~~~~~~~~~li  280 (345)
T cd07877         219 PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI----------------QSLTQMPKM--NFANVFIGANPLAVDLL  280 (345)
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHH----------------HHhcccCCc--chhhhcCCCCHHHHHHH
Confidence            888777777778777777776665544322111000                000000000  00001123566789999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      .+||+.||.+|||+.++++||||++
T Consensus       281 ~~~L~~dp~~R~t~~e~l~h~~f~~  305 (345)
T cd07877         281 EKMLVLDSDKRITAAQALAHAYFAQ  305 (345)
T ss_pred             HHHcCCChhhcCCHHHHhcChhhhh
Confidence            9999999999999999999999986

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=5.9e-43  Score=328.82  Aligned_cols=282  Identities=32%  Similarity=0.506  Sum_probs=217.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|++.+.||.|++|+||+|.+..+++.||+|.+....   .....+.+|+++++.+.|     +|++++++++......
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~   76 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH-----GNIVRLQDVVHSEKRL   76 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccC-----CCEeeEEEEEecCCeE
Confidence            57999999999999999999999999999999886432   223467789999999877     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |+||||++++|.+++.......+++..++.++.||+.||+|||++||+|+||||+||+++.                   
T Consensus        77 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~-------------------  137 (294)
T PLN00009         77 YLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR-------------------  137 (294)
T ss_pred             EEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC-------------------
Confidence            9999999889999987655445788999999999999999999999999999999999753                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                             .+..+||+|||++......   .....+++.|+|||++.+. .++.++|||||||++|+|+||.+||...+..
T Consensus       138 -------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~  210 (294)
T PLN00009        138 -------RTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI  210 (294)
T ss_pred             -------CCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                   2345778888877543222   1234578899999998764 5789999999999999999999999887777


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+....+.+....+............  ...|+                  ........+..++.+.++|.+||+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------~~~~~~~~~~~~~~~~~~i~~~l~~  270 (294)
T PLN00009        211 DELFKIFRILGTPNEETWPGVTSLPDYKSA--FPKWP------------------PKDLATVVPTLEPAGVDLLSKMLRL  270 (294)
T ss_pred             HHHHHHHHHhCCCChhhccccccchhhhhh--cccCC------------------CCCHHHhCcCCChHHHHHHHHHccC
Confidence            766666666665544433321111000000  00000                  0001111345677799999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||++||++.++++||||.+-
T Consensus       271 ~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        271 DPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             ChhhCcCHHHHhcCchHhHH
Confidence            99999999999999999763

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=2.9e-43  Score=331.21  Aligned_cols=253  Identities=28%  Similarity=0.446  Sum_probs=203.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ..+|++.+.||.|+||.||+|++..+++.||+|.+.... ...+.+.+|+.+++.+.|     +|++++++.+..+...|
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h-----~~v~~~~~~~~~~~~~~   93 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN-----PNIVNYLDSYLVGDELW   93 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCC-----CCEeeEEEEEEeCCEEE
Confidence            468999999999999999999999999999999986432 334567789998888876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++...   .+++.++..++.|++.||.|||+.||+||||||+|||++.+                  
T Consensus        94 lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~------------------  152 (296)
T cd06654          94 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD------------------  152 (296)
T ss_pred             EeecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC------------------
Confidence            999999 99999999764   48999999999999999999999999999999999997544                  


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                               +.++|+|||.+......   .....|++.|+|||.+.+..++.++|||||||++|+|++|+.||.......
T Consensus       153 ---------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~  223 (296)
T cd06654         153 ---------GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR  223 (296)
T ss_pred             ---------CCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                     45666666665432221   223468899999999998888999999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+... +..+                                             ......++..+.+||.+||..|
T Consensus       224 ~~~~~~~~-~~~~---------------------------------------------~~~~~~~~~~l~~li~~~l~~~  257 (296)
T cd06654         224 ALYLIATN-GTPE---------------------------------------------LQNPEKLSAIFRDFLNRCLDMD  257 (296)
T ss_pred             hHHHHhcC-CCCC---------------------------------------------CCCccccCHHHHHHHHHHCcCC
Confidence            22211110 0000                                             0001234556889999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~  427 (432)
                      |++|||+.++++||||...
T Consensus       258 p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         258 VEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             cccCcCHHHHhhChhhhcc
Confidence            9999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.7e-43  Score=332.39  Aligned_cols=279  Identities=32%  Similarity=0.518  Sum_probs=214.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh---hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC--C
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR--N  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~--~  169 (432)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|.++....   ....+.+|+.++..+.|     +||+++++++...  +
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~ni~~~~~~~~~~~~~   79 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQH-----PNIVTVKEVVVGSNLD   79 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCC-----CCEEEEEEEEEecCCC
Confidence            479999999999999999999999999999999974322   22345679999988877     9999999988766  8


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          170 HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       170 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      ..|+||||++++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+|||++.                 
T Consensus        80 ~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~-----------------  141 (293)
T cd07843          80 KIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN-----------------  141 (293)
T ss_pred             cEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC-----------------
Confidence            999999999889999988754 36899999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                ++.++|+|||.+......   .....+++.|+|||.+.+.. ++.++|||||||++|+|++|.+||...+
T Consensus       142 ----------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~  211 (293)
T cd07843         142 ----------RGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS  211 (293)
T ss_pred             ----------CCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                      445677777766543322   12345788899999987654 6889999999999999999999999888


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhccc-chHHHHHHHHHc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH-SAGYLIDLLQGL  404 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~  404 (432)
                      ..+....+....+.++...+..........    ...+..              .....+....... +++.+.+||++|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~li~~~  273 (293)
T cd07843         212 EIDQLNKIFKLLGTPTEKIWPGFSELPGAK----KKTFTK--------------YPYNQLRKKFPALSLSDNGFDLLNRL  273 (293)
T ss_pred             hHHHHHHHHHHhCCCchHHHHHhhccchhc----cccccc--------------ccchhhhccccccCCChHHHHHHHHH
Confidence            888777777777766554443322110000    000000              0000111111112 477789999999


Q ss_pred             cccCCCCCCCHHHHhcCCCC
Q 047395          405 LRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f  424 (432)
                      |+.||++|||+.|+|+||||
T Consensus       274 l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         274 LTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             hccCccccCCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=6.7e-43  Score=321.48  Aligned_cols=249  Identities=26%  Similarity=0.416  Sum_probs=203.5

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.+.||+|++|.||+|.+..+++.|++|.+...   ......+.+|++++..++|     +|++++++++...+..|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~   75 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS-----SYIIRYYESFLDKGKLN   75 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCC-----CCeehheeeeccCCEEE
Confidence            488999999999999999999999999999998642   3445677889998888877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++.......+++..+..++.||+.||.|||+.||+|+||||+||+++.+                  
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~------------------  137 (256)
T cd08529          76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAY------------------  137 (256)
T ss_pred             EEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCC------------------
Confidence            999999 9999999987644579999999999999999999999999999999999997654                  


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                               +.++|+|||++......   .....|++.|+|||++.+..++.++|||||||++|+|++|..||...+...
T Consensus       138 ---------~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  208 (256)
T cd08529         138 ---------DNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA  208 (256)
T ss_pred             ---------CCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                     45566666655443221   123467889999999999889999999999999999999999998766444


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+....  .+                                              .....++..+.++|.+||+.+
T Consensus       209 ~~~~~~~~~--~~----------------------------------------------~~~~~~~~~~~~~i~~~l~~~  240 (256)
T cd08529         209 LILKIIRGV--FP----------------------------------------------PVSQMYSQQLAQLIDQCLTKD  240 (256)
T ss_pred             HHHHHHcCC--CC----------------------------------------------CCccccCHHHHHHHHHHccCC
Confidence            333221110  00                                              001134556889999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 047395          409 PSSRLTAHDALKHPFF  424 (432)
Q Consensus       409 P~~R~ta~elL~hp~f  424 (432)
                      |++||++.++++|||+
T Consensus       241 p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         241 YRQRPDTFQLLRNPSL  256 (256)
T ss_pred             cccCcCHHHHhhCCCC
Confidence            9999999999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-44  Score=345.69  Aligned_cols=247  Identities=26%  Similarity=0.433  Sum_probs=207.7

Q ss_pred             eeecccceEEEEEEecCCCcEEEEEEee-chhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-C
Q 047395          102 KIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-G  179 (432)
Q Consensus       102 ~lg~G~~g~V~~a~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~  179 (432)
                      +||+|.||+||-|+|..+....|||-+. +......-+..||.+.+.|+|     .|||++++.+..++++-|.||-+ |
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrH-----kNIVrYLGs~senGf~kIFMEqVPG  656 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRH-----KNIVRYLGSVSENGFFKIFMEQVPG  656 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhh-----HhHHHHhhccCCCCeEEEEeecCCC
Confidence            7999999999999999999999999885 344555678889999999999     99999999999999999999988 9


Q ss_pred             CCHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccC
Q 047395          180 PSLYDFLRKNNYRPF--PVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL  257 (432)
Q Consensus       180 ~~L~~~l~~~~~~~l--~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  257 (432)
                      |+|.++|+.+- +++  ++..+-.+.+||++||.|||++.|||||||-+|+||+.                         
T Consensus       657 GSLSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT-------------------------  710 (1226)
T KOG4279|consen  657 GSLSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT-------------------------  710 (1226)
T ss_pred             CcHHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee-------------------------
Confidence            99999999865 567  88999999999999999999999999999999999864                         


Q ss_pred             CCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCC--CCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHH-
Q 047395          258 PKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA-  331 (432)
Q Consensus       258 ~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~-  331 (432)
                       -.+.+||+|||.++...   .-..++.||..|||||++-.+  .|+.++|||||||++.||.||++||.......... 
T Consensus       711 -ySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF  789 (1226)
T KOG4279|consen  711 -YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF  789 (1226)
T ss_pred             -ccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh
Confidence             45778999999887643   334567899999999999765  48999999999999999999999997543322110 


Q ss_pred             --HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          332 --MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       332 --~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                        -+.+..+++|                                                 ...+.++++||.+|+.+||
T Consensus       790 kVGmyKvHP~iP-------------------------------------------------eelsaeak~FilrcFepd~  820 (1226)
T KOG4279|consen  790 KVGMYKVHPPIP-------------------------------------------------EELSAEAKNFILRCFEPDP  820 (1226)
T ss_pred             hhcceecCCCCc-------------------------------------------------HHHHHHHHHHHHHHcCCCc
Confidence              0111222222                                                 3456778999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCcc
Q 047395          410 SSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       410 ~~R~ta~elL~hp~f~~~~~  429 (432)
                      .+||+|.++|..||++.+..
T Consensus       821 ~~R~sA~~LL~DpFlq~~~k  840 (1226)
T KOG4279|consen  821 CDRPSAKDLLQDPFLQHNNK  840 (1226)
T ss_pred             ccCccHHHhccCcccccCCC
Confidence            99999999999999988743

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=7.6e-43  Score=325.91  Aligned_cols=275  Identities=35%  Similarity=0.573  Sum_probs=212.3

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh--hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC--CeEE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR--NHIC  172 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~--~~~~  172 (432)
                      |++.++||+|+||.||+|.+..+++.||+|+++....  ......+|+.++..+.    .|+|++++++++.+.  +.++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~~~~~~~~~~~~~~~   76 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS----PHPNILRLIEVLFDRKTGRLA   76 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC----CCCCccceEEEEecCCCCcEE
Confidence            6789999999999999999999999999999864321  1223346777777664    149999999998877  8999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.                    
T Consensus        77 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~--------------------  135 (282)
T cd07831          77 LVFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD--------------------  135 (282)
T ss_pred             EEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC--------------------
Confidence            999999889999987653 36899999999999999999999999999999999999643                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                              +.++|+|||.+.......  ....++..|+|||++.. ..++.++|||||||++|||++|..||.+.+..+.
T Consensus       136 --------~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~  207 (282)
T cd07831         136 --------DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ  207 (282)
T ss_pred             --------CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH
Confidence                    567777777765443221  23457889999998754 4568899999999999999999999999888888


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+....+..+..+.........     ....++....               ..........+..+.+||.+||+.||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---------------~~~~~~~~~~~~~~~~li~~~l~~~P  267 (282)
T cd07831         208 IAKIHDVLGTPDAEVLKKFRKSRH-----MNYNFPSKKG---------------TGLRKLLPNASAEGLDLLKKLLAYDP  267 (282)
T ss_pred             HHHHHHHcCCCCHHHHHhhccccc-----ccccCccccc---------------ccHHHHcccccHHHHHHHHHHhccCc
Confidence            888888888777765333221110     0111111100               00111123457889999999999999


Q ss_pred             CCCCCHHHHhcCCCC
Q 047395          410 SSRLTAHDALKHPFF  424 (432)
Q Consensus       410 ~~R~ta~elL~hp~f  424 (432)
                      ++|||++++++||||
T Consensus       268 ~~R~~~~~~l~~~~~  282 (282)
T cd07831         268 DERITAKQALRHPYF  282 (282)
T ss_pred             ccccCHHHHhhCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=6.2e-43  Score=332.03  Aligned_cols=286  Identities=30%  Similarity=0.516  Sum_probs=210.5

Q ss_pred             ceEEEeeeecccceEEEEEEecC--CCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC-
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRE--TGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR-  168 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~--~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~-  168 (432)
                      +|++.++||+|+||.||+|.+..  +++.||+|.+....    .......+|+.++..+.|     +||+++++++... 
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~   75 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH-----ENVVSLVEVFLEHA   75 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCC-----CCccceEEEEeCCC
Confidence            58999999999999999999988  89999999987532    234567789999998877     9999999999887 


Q ss_pred             -CeEEEEEccCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          169 -NHICIVFEMLGPSLYDFLRKNNY---RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       169 -~~~~lv~e~~~~~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                       ..+|+||||++++|.+++.....   ..+++..++.++.||+.||.|||+++|+||||||+|||++.++          
T Consensus        76 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~----------  145 (316)
T cd07842          76 DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEG----------  145 (316)
T ss_pred             CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCC----------
Confidence             88999999998889888764321   2689999999999999999999999999999999999986621          


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg  317 (432)
                                   +..+.+||+|||++......      ....++|..|+|||++.+. .++.++|||||||++|+|++|
T Consensus       146 -------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~  212 (316)
T cd07842         146 -------------PERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTL  212 (316)
T ss_pred             -------------CccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhc
Confidence                         12456777777766543221      1234678899999998764 578999999999999999999


Q ss_pred             CCCCCCCCcH---------HHHHHHHHHhCCCCHHHHHhcCCcchhhh---ccCCcCCCCCCCCHHHHHHhhcCchhhhh
Q 047395          318 EALFQTHENL---------EHLAMMERVLGPIPQHMLKRVDKPAEKFV---RRGRLDWPEGATSRESIKAVLKLPRLQNL  385 (432)
Q Consensus       318 ~~pf~~~~~~---------~~~~~i~~~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (432)
                      .+||.+....         ..+..+...++..+...+....+..+...   ......++.              ..+...
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~  278 (316)
T cd07842         213 EPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPS--------------NSLAKW  278 (316)
T ss_pred             CCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCC--------------ccHHHH
Confidence            9999865432         23444555555544443332222111100   000000000              000000


Q ss_pred             hhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       386 ~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                       .......+..+.++|.+||+.||++|||+.|+++||||
T Consensus       279 -~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         279 -MEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             -HHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence             01113567779999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=2.2e-43  Score=337.78  Aligned_cols=281  Identities=28%  Similarity=0.537  Sum_probs=217.8

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc---
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY---  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~---  167 (432)
                      .++|++.+.||.|+||.||+|.+..+++.||+|++....   .....+.+|+.+++.+.|     +||+++++++..   
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~~~   78 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKH-----DNIIAIRDILRPPGA   78 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCC-----CCccCHHHhccccCC
Confidence            478999999999999999999999999999999986432   234456779999998877     999999998763   


Q ss_pred             -CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 -RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 -~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                       ...+|+||||++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+||+++.++            
T Consensus        79 ~~~~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~------------  144 (334)
T cd07855          79 DFKDVYVVMDLMESDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC------------  144 (334)
T ss_pred             CCceEEEEEehhhhhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC------------
Confidence             35789999999889999987654  599999999999999999999999999999999999976544            


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC-------ccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-------HNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~  318 (432)
                                     .++|+|||++......       .....|+..|+|||.+.+ ..++.++|||||||++|+|++|+
T Consensus       145 ---------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~  209 (334)
T cd07855         145 ---------------ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRR  209 (334)
T ss_pred             ---------------cEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCC
Confidence                           4555555555432111       123468889999999876 45889999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcc-hhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPA-EKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      .||.+.+....+..+....+.++........... .+....    ++.....               ......+..+..+
T Consensus       210 ~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------------~~~~~~~~~~~~~  270 (334)
T cd07855         210 QLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQN----LPRKQPV---------------PWSKIFPKASPEA  270 (334)
T ss_pred             CccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhh----cccCCCC---------------CHHHHcccCCHHH
Confidence            9999988888888888888888776654432211 000000    0000000               0011123457789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .++|.+||+.||++|||+.++++||||.+.
T Consensus       271 ~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~  300 (334)
T cd07855         271 LDLLSQMLQFDPEERITVEQALQHPFLAQY  300 (334)
T ss_pred             HHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence            999999999999999999999999999753

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.6e-43  Score=336.54  Aligned_cols=281  Identities=30%  Similarity=0.545  Sum_probs=218.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC-
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR-  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~-  168 (432)
                      +.++|.+.+.||+|+||.||+|++..+++.||||+++..   ......+.+|+.++..+.|     +||+++++++... 
T Consensus        13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~niv~~~~~~~~~~   87 (342)
T cd07879          13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQH-----ENVIGLLDVFTSAV   87 (342)
T ss_pred             cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCC-----CCccchhheecccc
Confidence            457899999999999999999999999999999998642   2223457789999988877     9999999988643 


Q ss_pred             -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          169 -----NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       169 -----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                           ..+|+|+||+..+|.+++.    ..+++..+..++.|++.||.|||++||+||||||+|||++            
T Consensus        88 ~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~------------  151 (342)
T cd07879          88 SGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN------------  151 (342)
T ss_pred             cCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC------------
Confidence                 3579999999878887653    2589999999999999999999999999999999999964            


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                     .++.++|+|||++...........+|..|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus       152 ---------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~  216 (342)
T cd07879         152 ---------------EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK  216 (342)
T ss_pred             ---------------CCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCC
Confidence                           4556788888877665444445577889999999876 458899999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.+....+..+....+..+..+.+.................+                  ........+..+..+.+||.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~li~  278 (342)
T cd07879         217 GKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYP------------------RKDFSTLFPKASPQAVDLLE  278 (342)
T ss_pred             CCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcc------------------cchHHHHhcCCCHHHHHHHH
Confidence            888777777788877777666655543322111000000000                  00001112345667899999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +||+.||++|||+++++.||||...
T Consensus       279 ~~l~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         279 KMLELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             HHcCCChhhCcCHHHHhcCcchhhc
Confidence            9999999999999999999999763

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=9.5e-43  Score=326.27  Aligned_cols=280  Identities=33%  Similarity=0.637  Sum_probs=217.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.++..   ....+.+.+|+++++.+.|     +||+++++++..++..
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~   75 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRH-----ENIVNLKEAFRRKGRL   75 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCC-----CCeeehhheEEECCEE
Confidence            4799999999999999999999999999999988643   2334678889999999987     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      ++||||+++++.+.+.... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.                   
T Consensus        76 ~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~-------------------  135 (288)
T cd07833          76 YLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE-------------------  135 (288)
T ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC-------------------
Confidence            9999999555555544433 35899999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                              ++.++|+|||.+.......    ....++..|+|||++.+. .++.++||||||+++|+|++|..||.+.+.
T Consensus       136 --------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~  207 (288)
T cd07833         136 --------SGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD  207 (288)
T ss_pred             --------CCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence                    5567777777765543322    235678899999999888 789999999999999999999999998888


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+.+..+....+..+..............    ....+....             ...........++..+.+||++||.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~li~~~l~  270 (288)
T cd07833         208 IDQLYLIQKCLGPLPPSHQELFSSNPRFA----GVAFPEPSQ-------------PESLERRYPGKVSSPALDFLKACLR  270 (288)
T ss_pred             HHHHHHHHHHhCCCCHHHhhhcccCcccc----ccccCCCCC-------------cHHHHHhcCCccchHHHHHHHHHhc
Confidence            77777777777777765544332211100    000000000             0011111223447789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 047395          407 YDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f  424 (432)
                      .||++|||++++++||||
T Consensus       271 ~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         271 MDPKERLTCDELLQHPYF  288 (288)
T ss_pred             cCchhcccHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=2.4e-43  Score=331.86  Aligned_cols=253  Identities=28%  Similarity=0.456  Sum_probs=202.7

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ...+|++.+.||.|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.++..+.|     +|++++++++..++..
T Consensus        17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h-----~~i~~~~~~~~~~~~~   91 (297)
T cd06656          17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN-----PNIVNYLDSYLVGDEL   91 (297)
T ss_pred             hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCC-----CCEeeEEEEEecCCEE
Confidence            3478999999999999999999999999999999986432 334567788888888777     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|.+++.+.   .+++..+..++.|++.||.|||+.||+||||||+|||++.+                 
T Consensus        92 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~-----------------  151 (297)
T cd06656          92 WVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMD-----------------  151 (297)
T ss_pred             EEeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC-----------------
Confidence            9999999 99999999764   48999999999999999999999999999999999997554                 


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                                +.++|+|||.+......   .....+++.|+|||.+.+..++.++|||||||++|+|++|..||...+..
T Consensus       152 ----------~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~  221 (297)
T cd06656         152 ----------GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL  221 (297)
T ss_pred             ----------CCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence                      45666666655432221   12346788999999999988999999999999999999999999765432


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .....+... +..+                                             .......+..+.+||.+||..
T Consensus       222 ~~~~~~~~~-~~~~---------------------------------------------~~~~~~~~~~~~~li~~~l~~  255 (297)
T cd06656         222 RALYLIATN-GTPE---------------------------------------------LQNPERLSAVFRDFLNRCLEM  255 (297)
T ss_pred             hheeeeccC-CCCC---------------------------------------------CCCccccCHHHHHHHHHHccC
Confidence            221111000 0000                                             001123455688999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~  426 (432)
                      ||++|||+.++++||||..
T Consensus       256 ~p~~Rps~~~il~~~~~~~  274 (297)
T cd06656         256 DVDRRGSAKELLQHPFLKL  274 (297)
T ss_pred             ChhhCcCHHHHhcCchhcc
Confidence            9999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-43  Score=330.02  Aligned_cols=255  Identities=30%  Similarity=0.490  Sum_probs=203.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .++|++.+.||.|+||.||+|.+..++..||+|+++.. ....+.+..|+.+++.++|     +|++++++.+..+...|
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~   78 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH-----PNIVGLYEAYFYENKLW   78 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCC-----CceeEEEEEEecCCeEE
Confidence            46799999999999999999999889999999998643 2334567789999998877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++.+                  
T Consensus        79 lv~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~------------------  139 (280)
T cd06611          79 ILIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLD------------------  139 (280)
T ss_pred             EEeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCC------------------
Confidence            999999 889999987654 369999999999999999999999999999999999997554                  


Q ss_pred             cccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhC-----CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                               +.++|+|||.+.....   ......+|+.|+|||++..     ..++.++|||||||++|+|++|..||..
T Consensus       140 ---------~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~  210 (280)
T cd06611         140 ---------GDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHE  210 (280)
T ss_pred             ---------CCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCccc
Confidence                     4556666665443221   1223468899999999853     3467899999999999999999999987


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+.......+....  .+.                                            ......++..+.++|.+
T Consensus       211 ~~~~~~~~~~~~~~--~~~--------------------------------------------~~~~~~~~~~~~~li~~  244 (280)
T cd06611         211 LNPMRVLLKILKSE--PPT--------------------------------------------LDQPSKWSSSFNDFLKS  244 (280)
T ss_pred             CCHHHHHHHHhcCC--CCC--------------------------------------------cCCcccCCHHHHHHHHH
Confidence            65444332221110  000                                            00012345668899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||+.||.+|||+.++++||||.+.
T Consensus       245 ~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         245 CLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HhccChhhCcCHHHHhcChhhccc
Confidence            999999999999999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=4.4e-43  Score=329.88  Aligned_cols=252  Identities=30%  Similarity=0.491  Sum_probs=204.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ..+|++.+.||.|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.++|     +|++++++++...+.+|
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~~~~~   92 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKN-----PNIVNFLDSFLVGDELF   92 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCC-----CceeeeeeeEecCceEE
Confidence            357999999999999999999999999999999986432 334567789999988877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +|+||+ +++|.+++...   .+++.++..++.|++.||.|||++|++|+||||+||+++.+                  
T Consensus        93 lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~------------------  151 (296)
T cd06655          93 VVMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMD------------------  151 (296)
T ss_pred             EEEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC------------------
Confidence            999999 99999998764   48999999999999999999999999999999999997554                  


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                               +.++|+|||++......   .....++..|+|||.+.+..++.++|||||||++|+|++|..||...+...
T Consensus       152 ---------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~  222 (296)
T cd06655         152 ---------GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR  222 (296)
T ss_pred             ---------CCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                     45666666655433221   123467889999999998889999999999999999999999998766544


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+... . .+.                                            ......+++.+.+||.+||..|
T Consensus       223 ~~~~~~~~-~-~~~--------------------------------------------~~~~~~~~~~~~~li~~~l~~d  256 (296)
T cd06655         223 ALYLIATN-G-TPE--------------------------------------------LQNPEKLSPIFRDFLNRCLEMD  256 (296)
T ss_pred             HHHHHHhc-C-Ccc--------------------------------------------cCCcccCCHHHHHHHHHHhhcC
Confidence            33222111 0 000                                            0011235566889999999999


Q ss_pred             CCCCCCHHHHhcCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~  426 (432)
                      |++|||+.++++||||+.
T Consensus       257 p~~Rpt~~~il~~~~~~~  274 (296)
T cd06655         257 VEKRGSAKELLQHPFLKL  274 (296)
T ss_pred             hhhCCCHHHHhhChHhhh
Confidence            999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-45  Score=366.15  Aligned_cols=258  Identities=26%  Similarity=0.441  Sum_probs=211.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|.|++.||+|+||.|.+++++.+++.||+|++++-.    .....|..|-.+|..-..     +.|+.++-.|++++
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns-----~Wiv~LhyAFQD~~  148 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNS-----EWIVQLHYAFQDER  148 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCc-----HHHHHHHHHhcCcc
Confidence            478999999999999999999999999999999997622    233456667777665444     88999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ++|+||||+ ||+|..+|.+..  ++++..++.++..|+.||+-||+.|+|||||||+|||++.                
T Consensus       149 ~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~----------------  210 (1317)
T KOG0612|consen  149 YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK----------------  210 (1317)
T ss_pred             ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc----------------
Confidence            999999999 999999999876  7999999999999999999999999999999999999554                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccC----CccccccCCCcchhHHHhC-----CCCCccchHHHHHHHHHHHHhCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQ----EHNYIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                 .|++||+|||.+.....    .....+|||.|.+||++..     +.|+..+|+||+||++|||+.|..
T Consensus       211 -----------~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~T  279 (1317)
T KOG0612|consen  211 -----------SGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGET  279 (1317)
T ss_pred             -----------cCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCC
Confidence                       55566666665543322    1244689999999999963     358999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||...+-.+.+..|.....                     .+.+|.                        ...+|.++++
T Consensus       280 PFYadslveTY~KIm~hk~---------------------~l~FP~------------------------~~~VSeeakd  314 (1317)
T KOG0612|consen  280 PFYADSLVETYGKIMNHKE---------------------SLSFPD------------------------ETDVSEEAKD  314 (1317)
T ss_pred             cchHHHHHHHHHHHhchhh---------------------hcCCCc------------------------ccccCHHHHH
Confidence            9998887777777655411                     111110                        1246788999


Q ss_pred             HHHHccccCCCCCCC---HHHHhcCCCCCCCccCC
Q 047395          400 LLQGLLRYDPSSRLT---AHDALKHPFFTRDYYRR  431 (432)
Q Consensus       400 li~~~L~~dP~~R~t---a~elL~hp~f~~~~~~~  431 (432)
                      ||.+++. +|+.|+.   ++++.+||||.+..|..
T Consensus       315 LI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~  348 (1317)
T KOG0612|consen  315 LIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDN  348 (1317)
T ss_pred             HHHHHhc-ChhhhcccccHHHHHhCccccCCChhh
Confidence            9998876 6889998   99999999999988753

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=1.4e-42  Score=324.53  Aligned_cols=277  Identities=32%  Similarity=0.551  Sum_probs=214.1

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      +|++.++||.|++|.||+|++..+++.||||+++...  .....+.+|+.+++.++|     +|++++++++...+..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~~~l   75 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH-----ENIVRLHDVIHTENKLML   75 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcC-----CCEeeeeeeEeeCCcEEE
Confidence            5899999999999999999999999999999986432  234566789999999877     999999999999999999


Q ss_pred             EEccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEMLGPSLYDFLRKNN-YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+.++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||++++                    
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~--------------------  135 (284)
T cd07836          76 VFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINK--------------------  135 (284)
T ss_pred             EEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--------------------
Confidence            99999779999987643 235899999999999999999999999999999999999654                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                             ++.++|+|||.+......   .....++..|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+
T Consensus       136 -------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~  208 (284)
T cd07836         136 -------RGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED  208 (284)
T ss_pred             -------CCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence                   445666666665433221   1224568899999998764 46889999999999999999999999888877


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.+....+....+..+.... .+.    ...+...  ..             ......+..+..+.++|.+||+.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~--~~-------------~~~~~~~~~~~~~~~~i~~~l~~~  268 (284)
T cd07836         209 QLLKIFRIMGTPTESTWPGISQLP-EYK----PTFPRYP--PQ-------------DLQQLFPHADPLGIDLLHRLLQLN  268 (284)
T ss_pred             HHHHHHHHhCCCChhhHHHHhcCc-hhc----ccccCCC--hH-------------HHHHHhhhcCcHHHHHHHHHhcCC
Confidence            777777666655544443332110 000    0000000  00             001112345677899999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 047395          409 PSSRLTAHDALKHPFF  424 (432)
Q Consensus       409 P~~R~ta~elL~hp~f  424 (432)
                      |.+||++.|+++||||
T Consensus       269 p~~R~~~~~~l~~~~f  284 (284)
T cd07836         269 PELRISAHDALQHPWF  284 (284)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=4.3e-43  Score=329.47  Aligned_cols=257  Identities=26%  Similarity=0.472  Sum_probs=203.1

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ..+.|+++++||.|+||.||+|.+..+++.||+|++... ......+.+|+.+++.+.|     +|++++++.+..++..
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~   84 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNH-----PYIVKLLGAFYWDGKL   84 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCC-----CcEeeeEEEEEeCCeE
Confidence            346799999999999999999999999999999998643 2345567789988888877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|..++.+.. ..+++..+..++.||+.||.|||++||+||||||+||+++.+                 
T Consensus        85 ~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~-----------------  146 (292)
T cd06644          85 WIMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLD-----------------  146 (292)
T ss_pred             EEEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCC-----------------
Confidence            9999999 889988876543 468999999999999999999999999999999999996544                 


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHh-----CCCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                +.++|+|||++.....   ......++..|+|||++.     ...++.++|||||||++|+|++|..||.
T Consensus       147 ----------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~  216 (292)
T cd06644         147 ----------GDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH  216 (292)
T ss_pred             ----------CCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCc
Confidence                      4566666665543221   123346788999999985     3346789999999999999999999997


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ..+.......+...  ..+.                                            ......++..+.++|.
T Consensus       217 ~~~~~~~~~~~~~~--~~~~--------------------------------------------~~~~~~~~~~~~~li~  250 (292)
T cd06644         217 ELNPMRVLLKIAKS--EPPT--------------------------------------------LSQPSKWSMEFRDFLK  250 (292)
T ss_pred             cccHHHHHHHHhcC--CCcc--------------------------------------------CCCCcccCHHHHHHHH
Confidence            65543332222111  0000                                            0011234556889999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +||..||++||+++++++||||..-.
T Consensus       251 ~~l~~~p~~Rp~~~~il~~~~~~~~~  276 (292)
T cd06644         251 TALDKHPETRPSAAQLLEHPFVSSVT  276 (292)
T ss_pred             HHhcCCcccCcCHHHHhcCccccccc
Confidence            99999999999999999999997643

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=1e-42  Score=334.06  Aligned_cols=281  Identities=26%  Similarity=0.458  Sum_probs=207.7

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC---
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR---  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~---  168 (432)
                      +..+|++.+.||.|+||.||+|.+..+++.||+|++.... .....+.+|+++++.++|     +||+++++.+...   
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h-----~~i~~~~~~~~~~~~~   77 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDH-----DNIVKVYEVLGPSGSD   77 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCC-----CcchhhHhhhcccccc
Confidence            3578999999999999999999999999999999986432 334567789999999877     9999998776543   


Q ss_pred             -----------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccc
Q 047395          169 -----------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLK  237 (432)
Q Consensus       169 -----------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  237 (432)
                                 ...|+||||++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+||+++.     
T Consensus        78 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~-----  149 (342)
T cd07854          78 LTEDVGSLTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT-----  149 (342)
T ss_pred             cccccccccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-----
Confidence                       358999999988999988654   4899999999999999999999999999999999999753     


Q ss_pred             cCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhC-CCCCccchHHHHHHH
Q 047395          238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCI  310 (432)
Q Consensus       238 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvi  310 (432)
                                           .+..++|+|||.+......      .....++..|+|||++.+ ..++.++|||||||+
T Consensus       150 ---------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvi  208 (342)
T cd07854         150 ---------------------EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCI  208 (342)
T ss_pred             ---------------------CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHH
Confidence                                 2334667777766543211      122357889999998765 457889999999999


Q ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhc
Q 047395          311 LIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV  390 (432)
Q Consensus       311 l~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (432)
                      +|+|++|..||.+.+..+....+..........................  .+.                 .........
T Consensus       209 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------------~~~~~~~~~  269 (342)
T cd07854         209 FAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRND--GGE-----------------PRRPLRDLL  269 (342)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhc--ccc-----------------cCCCHHHHc
Confidence            9999999999988777665555544433222211111100000000000  000                 000001112


Q ss_pred             ccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       391 ~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ...+.++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       270 ~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         270 PGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             cCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence            356777999999999999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=1.3e-42  Score=326.04  Aligned_cols=257  Identities=26%  Similarity=0.440  Sum_probs=201.1

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC---
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR---  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~---  168 (432)
                      ...++|++.+.||+|+||.||+|.+..+++.+|+|++.........+.+|+.++..+..    |+|++++++++...   
T Consensus        19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~----h~ni~~~~~~~~~~~~~   94 (291)
T cd06639          19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPN----HPNVVKFYGMFYKADKL   94 (291)
T ss_pred             CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcC----CCCeEEEEEEEEecccc
Confidence            35688999999999999999999999999999999987654455667788888888732    39999999987643   


Q ss_pred             --CeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          169 --NHICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       169 --~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                        +..|+||||+ +++|.+++...  ....+++..++.++.|++.||.|||++||+||||||+||+++.           
T Consensus        95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~-----------  163 (291)
T cd06639          95 VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT-----------  163 (291)
T ss_pred             CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC-----------
Confidence              4689999999 89999988642  2246899999999999999999999999999999999999654           


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-----CCCccchHHHHHHHHHHHH
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-----GWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~sDiwSlGvil~ell  315 (432)
                                      ++.++|+|||++......   .....|+..|+|||++...     .++.++|||||||++|+|+
T Consensus       164 ----------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~  227 (291)
T cd06639         164 ----------------EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELG  227 (291)
T ss_pred             ----------------CCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHh
Confidence                            445777777766543221   2234688899999998643     3678999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchH
Q 047395          316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG  395 (432)
Q Consensus       316 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (432)
                      +|+.||........+..+.+.  ..+ .                                           .......+.
T Consensus       228 ~g~~p~~~~~~~~~~~~~~~~--~~~-~-------------------------------------------~~~~~~~~~  261 (291)
T cd06639         228 DGDPPLFDMHPVKTLFKIPRN--PPP-T-------------------------------------------LLHPEKWCR  261 (291)
T ss_pred             hCCCCCCCCcHHHHHHHHhcC--CCC-C-------------------------------------------CCcccccCH
Confidence            999999865543333222111  000 0                                           000122345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q 047395          396 YLIDLLQGLLRYDPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       396 ~l~~li~~~L~~dP~~R~ta~elL~hp~f~  425 (432)
                      .+.+||.+||+.||++||++.|+++||||+
T Consensus       262 ~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         262 SFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            588999999999999999999999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=8.5e-43  Score=325.87  Aligned_cols=276  Identities=32%  Similarity=0.536  Sum_probs=213.6

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      |++.+.||.|++|.||+|.+..+|..||+|++....   .....+.+|+.+++.++|     +|++++++++..++..|+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~iv~~~~~~~~~~~~~i   75 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNH-----PNIVRLLDVVHSENKLYL   75 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCC-----CCccCHhheeccCCeEEE
Confidence            678899999999999999999999999999986432   223467789999998877     999999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          174 VFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       174 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      +|||++++|.+++.......+++..+..++.||+.||+|||+++++||||+|+||+++.                     
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~---------------------  134 (283)
T cd07835          76 VFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR---------------------  134 (283)
T ss_pred             EEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC---------------------
Confidence            99999889999998765446899999999999999999999999999999999999654                     


Q ss_pred             cccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                            ++.++|+|||.+......   .....++..|+|||++.+. .++.++|||||||++|+|++|++||...+....
T Consensus       135 ------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~  208 (283)
T cd07835         135 ------EGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ  208 (283)
T ss_pred             ------CCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                  445677777766543211   1223568889999988764 468899999999999999999999998887777


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+.+..+.+....+...........     ..+..             .  ..........++..+.++|.+||+.||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-------------~--~~~~~~~~~~~~~~~~~li~~~l~~~P  268 (283)
T cd07835         209 LFRIFRTLGTPDEDVWPGVTSLPDYKP-----TFPKW-------------A--RQDLSKVVPNLDEDGLDLLSKMLVYDP  268 (283)
T ss_pred             HHHHHHHhCCCChHHhhhhhhchhhhh-----hcccc-------------c--ccchhhhcCCCCHHHHHHHHHHhcCCh
Confidence            666666666555544333211111000     00000             0  000011234566779999999999999


Q ss_pred             CCCCCHHHHhcCCCC
Q 047395          410 SSRLTAHDALKHPFF  424 (432)
Q Consensus       410 ~~R~ta~elL~hp~f  424 (432)
                      ++|||++|+++||||
T Consensus       269 ~~Rpt~~~il~~~~~  283 (283)
T cd07835         269 AKRISAKAALQHPYF  283 (283)
T ss_pred             hhCcCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.1e-42  Score=325.57  Aligned_cols=256  Identities=26%  Similarity=0.455  Sum_probs=200.0

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHH-hcCCCCCceeEeecccc---
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGSRCVQIRNWFD---  166 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~~~~~~~iv~~~~~~~---  166 (432)
                      ....++|++.+.||+|+||.||+|.+..+++.+|+|+++........+.+|+.++..+. |     +|++++++++.   
T Consensus        14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h-----~~i~~~~~~~~~~~   88 (286)
T cd06638          14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDH-----PNVVKFYGMYYKKD   88 (286)
T ss_pred             CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcC-----CCeeeeeeeeeecc
Confidence            44578999999999999999999999999999999998765444566788999998885 5     99999999863   


Q ss_pred             --cCCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCc
Q 047395          167 --YRNHICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       167 --~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                        .++..++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+++|+||||||+||+++.         
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~---------  159 (286)
T cd06638          89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT---------  159 (286)
T ss_pred             cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECC---------
Confidence              456799999999 99999988642  2246889999999999999999999999999999999999654         


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhC-----CCCCccchHHHHHHHHHH
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILIE  313 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvil~e  313 (432)
                                        .+.++|+|||++.....   ......|++.|+|||++..     ..++.++|||||||++|+
T Consensus       160 ------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~e  221 (286)
T cd06638         160 ------------------EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIE  221 (286)
T ss_pred             ------------------CCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHH
Confidence                              34567777776654322   1223468999999999853     347889999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccc
Q 047395          314 LCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS  393 (432)
Q Consensus       314 lltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (432)
                      |++|..||...........+...  ..+                    .                        ......+
T Consensus       222 l~~g~~p~~~~~~~~~~~~~~~~--~~~--------------------~------------------------~~~~~~~  255 (286)
T cd06638         222 LGDGDPPLADLHPMRALFKIPRN--PPP--------------------T------------------------LHQPELW  255 (286)
T ss_pred             HhcCCCCCCCCchhHHHhhcccc--CCC--------------------c------------------------ccCCCCc
Confidence            99999999765433222111000  000                    0                        0001123


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       394 ~~~l~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      +..+.+||.+||+.||++|||+.|+++|+||
T Consensus       256 ~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         256 SNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            4568899999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.6e-45  Score=314.33  Aligned_cols=297  Identities=28%  Similarity=0.497  Sum_probs=226.6

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec---hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--  167 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--  167 (432)
                      ..+.|+-..+||+|.||.||+|+...+|+.||+|++--   .........+|+++|+.|+|     +|++.+++.+..  
T Consensus        15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkH-----env~nliEic~tk~   89 (376)
T KOG0669|consen   15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKH-----ENVVNLIEICRTKA   89 (376)
T ss_pred             cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcc-----hhHHHHHHHHhhcc
Confidence            45678889999999999999999999999999997532   23345678899999999998     999888887753  


Q ss_pred             ------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCc
Q 047395          168 ------RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       168 ------~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                            ...+|+||.+|..+|.-+|.... ..++..+++.++.+++.||.|+|+..|+|||+||+|+||+.+|.+|++||
T Consensus        90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADF  168 (376)
T KOG0669|consen   90 TPTNRDRATFYLVFDFCEHDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADF  168 (376)
T ss_pred             CCcccccceeeeeHHHhhhhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecc
Confidence                  24599999999999999997653 46999999999999999999999999999999999999776665555555


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCC
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~p  320 (432)
                      |+++......+.                    .....+..+-|.+|++||.+.|. .|+++.|||..|||+.||+||.+.
T Consensus       169 Glar~fs~~~n~--------------------~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspi  228 (376)
T KOG0669|consen  169 GLARAFSTSKNV--------------------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPI  228 (376)
T ss_pred             ccccceeccccc--------------------CCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcc
Confidence            554322111100                    11122334669999999999986 589999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |++.++..++..|...+|.+..+.|+.+++-.-.-... ..+.|.+.  ...++..++         .  -.-.+++.||
T Consensus       229 mqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie-~ePl~~~~--~rkv~n~~k---------p--~~kd~~a~dL  294 (376)
T KOG0669|consen  229 MQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIE-LEPLPKGQ--KRKVKNRLK---------P--YVKDDEALDL  294 (376)
T ss_pred             ccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhcc-CCCCCcch--hhhhhhhcc---------c--ccCChhHHHH
Confidence            99999999999999999999888777665532211000 00011111  011111111         0  1124567899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      |.+||..||.+|++++++|+|.||..+-.
T Consensus       295 le~ll~~DP~kR~~ad~alnh~~F~kdp~  323 (376)
T KOG0669|consen  295 LEKLLKLDPTKRIDADQALNHDFFWKDPM  323 (376)
T ss_pred             HHHHhccCcccCcchHhhhchhhhhcCCc
Confidence            99999999999999999999999987643

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-43  Score=327.00  Aligned_cols=252  Identities=28%  Similarity=0.424  Sum_probs=205.0

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++.+.||.|+||.||+|.+..+++.||+|++....  .....+.+|+.+++.++|     +|++++++++..+...|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~   75 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRS-----PYITKYYGSFLKGSKLW   75 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCC-----CCeeeeeEEEEECCeEE
Confidence            47899999999999999999999999999999986432  334567789998888876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +|+||+ +++|.+++...   .+++..++.++.|++.||.|||+++|+|+||+|+||+++.                   
T Consensus        76 ~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~-------------------  133 (274)
T cd06609          76 IIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE-------------------  133 (274)
T ss_pred             EEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC-------------------
Confidence            999999 89999999865   5899999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              ++.++|+|||.+......   .....++..|+|||.+.+..++.++|||||||++|+|++|..||...+...
T Consensus       134 --------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~  205 (274)
T cd06609         134 --------EGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR  205 (274)
T ss_pred             --------CCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH
Confidence                    445667777766544322   233568889999999998889999999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.....+.                      .+                         ...++..+.++|.+||..|
T Consensus       206 ~~~~~~~~~~~~----------------------~~-------------------------~~~~~~~~~~~l~~~l~~~  238 (274)
T cd06609         206 VLFLIPKNNPPS----------------------LE-------------------------GNKFSKPFKDFVSLCLNKD  238 (274)
T ss_pred             HHHHhhhcCCCC----------------------Cc-------------------------ccccCHHHHHHHHHHhhCC
Confidence            322221110000                      00                         0014556889999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCc
Q 047395          409 PSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~  428 (432)
                      |++|||++++++||||++..
T Consensus       239 p~~Rpt~~~il~~~~~~~~~  258 (274)
T cd06609         239 PKERPSAKELLKHKFIKKAK  258 (274)
T ss_pred             hhhCcCHHHHhhChhhcCCC
Confidence            99999999999999998753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=1.9e-43  Score=329.71  Aligned_cols=255  Identities=22%  Similarity=0.371  Sum_probs=198.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++.+.||+|+||.||+|++..+++.||+|++...  ......+.+|++++..+.|     +||+++++.+...+..+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~~   75 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS-----PYIIGFYGAFFVENRIS   75 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCC-----CCeeeEEEEEEECCEEE
Confidence            3688999999999999999999999999999998643  2334567889999988877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|..+.      .+++..+..++.|++.||.|||+.||+|+||||+|||++.                   
T Consensus        76 lv~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~-------------------  130 (279)
T cd06619          76 ICTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT-------------------  130 (279)
T ss_pred             EEEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC-------------------
Confidence            999999 88886542      4789999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL  330 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~  330 (432)
                              ++.++|+|||++..... .....+||..|+|||++.+..++.++|||||||++|+|++|+.||.........
T Consensus       131 --------~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~  202 (279)
T cd06619         131 --------RGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS  202 (279)
T ss_pred             --------CCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc
Confidence                    45567777776654322 233457899999999999888999999999999999999999999653211100


Q ss_pred             HHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCC
Q 047395          331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPS  410 (432)
Q Consensus       331 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  410 (432)
                      .        .+.........       .....                         ......+..+.++|.+||+.||+
T Consensus       203 ~--------~~~~~~~~~~~-------~~~~~-------------------------~~~~~~~~~~~~li~~~l~~~P~  242 (279)
T cd06619         203 L--------MPLQLLQCIVD-------EDPPV-------------------------LPVGQFSEKFVHFITQCMRKQPK  242 (279)
T ss_pred             c--------chHHHHHHHhc-------cCCCC-------------------------CCCCcCCHHHHHHHHHHhhCChh
Confidence            0        00000000000       00000                         00123456688999999999999


Q ss_pred             CCCCHHHHhcCCCCCCC
Q 047395          411 SRLTAHDALKHPFFTRD  427 (432)
Q Consensus       411 ~R~ta~elL~hp~f~~~  427 (432)
                      +||+++|+++||||.+.
T Consensus       243 ~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         243 ERPAPENLMDHPFIVQY  259 (279)
T ss_pred             hCCCHHHHhcCcccccc
Confidence            99999999999999764

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=5.2e-43  Score=327.18  Aligned_cols=254  Identities=29%  Similarity=0.499  Sum_probs=201.7

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      -|++.+.||.|+||.||+|.+..++..+++|.+... ......+.+|+.++..+.|     +|++++++++...+..|+|
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h-----~~ii~~~~~~~~~~~~~~v   80 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDH-----PNIVKLLDAFYYENNLWIL   80 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCC-----CCeeeEEEEEeeCCEEEEE
Confidence            378899999999999999999999999999998643 3344567789998888877     9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+ +++|..++.... .++++..+..++.||+.||.|||+.||+||||||+|||++.++                   
T Consensus        81 ~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~-------------------  140 (282)
T cd06643          81 IEFCAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG-------------------  140 (282)
T ss_pred             EEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC-------------------
Confidence            9999 889988876543 4699999999999999999999999999999999999976544                   


Q ss_pred             cccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHh-----CCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                              .++|+|||++.....   ......+|..|+|||++.     +..++.++|||||||++|+|++|.+||...+
T Consensus       141 --------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~  212 (282)
T cd06643         141 --------DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN  212 (282)
T ss_pred             --------CEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC
Confidence                    456666665543221   122346889999999984     3457789999999999999999999998766


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .......+.....+.                                              ......++..+.+||.+||
T Consensus       213 ~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l  246 (282)
T cd06643         213 PMRVLLKIAKSEPPT----------------------------------------------LAQPSRWSSEFKDFLKKCL  246 (282)
T ss_pred             HHHHHHHHhhcCCCC----------------------------------------------CCCccccCHHHHHHHHHHc
Confidence            544433332211100                                              0011234566889999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCc
Q 047395          406 RYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +.||.+|||+.++++||||+...
T Consensus       247 ~~~p~~Rp~~~~il~~~~~~~~~  269 (282)
T cd06643         247 EKNVDARWTTTQLLQHPFVTVNS  269 (282)
T ss_pred             cCChhhCcCHHHHhcCCCEeccC
Confidence            99999999999999999998654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=2.3e-43  Score=326.83  Aligned_cols=252  Identities=26%  Similarity=0.413  Sum_probs=197.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .++|++.+.||+|+||.||+|++..+++.||+|+++... .....+.+|+.+++.++|     +||+++++.+...+.+|
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h-----~~ii~~~~~~~~~~~~~   82 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH-----SNIVAYFGSYLRRDKLW   82 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCC-----CCeeeEEEEEEeCCEEE
Confidence            357999999999999999999999999999999987432 233456778888888877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++...+  .+++.+++.++.|++.||.|||++||+|+||||+||+++.++                 
T Consensus        83 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~-----------------  143 (267)
T cd06645          83 ICMEFCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG-----------------  143 (267)
T ss_pred             EEEeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-----------------
Confidence            999999 889999997764  699999999999999999999999999999999999975544                 


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHh---CCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                .++|+|||++......   .....|+..|+|||++.   ...++.++|||||||++|+|++|..||....
T Consensus       144 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~  213 (267)
T cd06645         144 ----------HVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH  213 (267)
T ss_pred             ----------CEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccccc
Confidence                      4566666655432211   22346899999999985   4457889999999999999999999996544


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .......+.......+                       .                     ......++..+.++|.+||
T Consensus       214 ~~~~~~~~~~~~~~~~-----------------------~---------------------~~~~~~~~~~~~~li~~~l  249 (267)
T cd06645         214 PMRALFLMTKSNFQPP-----------------------K---------------------LKDKMKWSNSFHHFVKMAL  249 (267)
T ss_pred             chhhHHhhhccCCCCC-----------------------c---------------------ccccCCCCHHHHHHHHHHc
Confidence            3322211111000000                       0                     0001124556889999999


Q ss_pred             ccCCCCCCCHHHHhcCCC
Q 047395          406 RYDPSSRLTAHDALKHPF  423 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~  423 (432)
                      +.||++|||++++++|||
T Consensus       250 ~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         250 TKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             cCCchhCcCHHHHhcCCC
Confidence            999999999999999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=6e-43  Score=321.80  Aligned_cols=250  Identities=28%  Similarity=0.473  Sum_probs=203.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|.++.... .+.+.+|+++++.++|     +||+++++++......|++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~-----~~i~~~~~~~~~~~~~~l~   76 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDS-----PYIVKYYGSYFKNTDLWIV   76 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCC-----CcEeeeeeeeecCCcEEEE
Confidence            579999999999999999999998899999999976544 6778899999998866     9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      +||+ +++|.+++.... ..+++..++.++.|++.||.|||+.||+|+||+|+||+++.+                    
T Consensus        77 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~--------------------  135 (256)
T cd06612          77 MEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEE--------------------  135 (256)
T ss_pred             EecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCC--------------------
Confidence            9999 889999997644 468999999999999999999999999999999999996554                    


Q ss_pred             cccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL  330 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~  330 (432)
                             +.++|+|||++......   .....++..|+|||++.+..++.++|||||||++|+|++|+.||.........
T Consensus       136 -------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~  208 (256)
T cd06612         136 -------GQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI  208 (256)
T ss_pred             -------CcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh
Confidence                   45666666665543322   22345788999999999988999999999999999999999999765443222


Q ss_pred             HHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCC
Q 047395          331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPS  410 (432)
Q Consensus       331 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  410 (432)
                      ..+...   .+                       .                    .......++..+.++|.+||+.||+
T Consensus       209 ~~~~~~---~~-----------------------~--------------------~~~~~~~~~~~~~~~i~~~l~~~P~  242 (256)
T cd06612         209 FMIPNK---PP-----------------------P--------------------TLSDPEKWSPEFNDFVKKCLVKDPE  242 (256)
T ss_pred             hhhccC---CC-----------------------C--------------------CCCchhhcCHHHHHHHHHHHhcChh
Confidence            111000   00                       0                    0001123455688999999999999


Q ss_pred             CCCCHHHHhcCCCC
Q 047395          411 SRLTAHDALKHPFF  424 (432)
Q Consensus       411 ~R~ta~elL~hp~f  424 (432)
                      +|||+.|+|+||||
T Consensus       243 ~Rps~~~il~~~~~  256 (256)
T cd06612         243 ERPSAIQLLQHPFI  256 (256)
T ss_pred             hCcCHHHHhcCCCC
Confidence            99999999999998

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=9.4e-43  Score=322.38  Aligned_cols=257  Identities=26%  Similarity=0.413  Sum_probs=198.0

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-------hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-------KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-------~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      +|++.+.||.|+||.||+|.+ .+++.+|+|+++..       ......+.+|+++++.++|     +||+++++++...
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~   74 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH-----VNIVQYLGTCLDD   74 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCC-----CCEeeEeeEeecC
Confidence            478899999999999999986 47889999988632       1223457789999888877     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +..++|+||+ +++|.+++.+..  .+++..+..++.|++.||+|||+.||+|+||||+||++++++.++++|||++...
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          75 NTISIFMEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             CeEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            9999999999 999999998754  6899999999999999999999999999999999999766555555555443211


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                      ....                  .............|+..|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus       153 ~~~~------------------~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~  214 (265)
T cd06631         153 AWVG------------------LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL  214 (265)
T ss_pred             hhcc------------------ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH
Confidence            0000                  0000001112345889999999999888999999999999999999999999765543


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .....+....+..|                                              .....++..+.++|++||..
T Consensus       215 ~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~i~~~l~~  248 (265)
T cd06631         215 AAMFYIGAHRGLMP----------------------------------------------RLPDSFSAAAIDFVTSCLTR  248 (265)
T ss_pred             HHHHHhhhccCCCC----------------------------------------------CCCCCCCHHHHHHHHHHhcC
Confidence            33222211111111                                              01124566688999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 047395          408 DPSSRLTAHDALKHPFF  424 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f  424 (432)
                      ||++|||+.|+++||||
T Consensus       249 ~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         249 DQHERPSALQLLRHDFL  265 (265)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.4e-42  Score=319.46  Aligned_cols=249  Identities=27%  Similarity=0.467  Sum_probs=204.4

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.+.||+|+||.||++.+..+++.||+|.+...   ......+.+|+.+++.++|     +||+++++++...++.|
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~   75 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH-----PNIVQYQESFEENGNLY   75 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCC-----CCeeeeEeeecCCCeEE
Confidence            589999999999999999999999999999998642   2334567889999998877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+|||++.                   
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~-------------------  136 (256)
T cd08218          76 IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK-------------------  136 (256)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC-------------------
Confidence            999999 899999998754446899999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              ++.++|+|||.+.......   ....|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+
T Consensus       137 --------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~  208 (256)
T cd08218         137 --------DGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN  208 (256)
T ss_pred             --------CCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH
Confidence                    4457777777665433221   23457889999999998889999999999999999999999997655444


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+..  +..+                                              ......+..+.++|.+||+.+
T Consensus       209 ~~~~~~~--~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~~  240 (256)
T cd08218         209 LVLKIIR--GSYP----------------------------------------------PVSSHYSYDLRNLVSQLFKRN  240 (256)
T ss_pred             HHHHHhc--CCCC----------------------------------------------CCcccCCHHHHHHHHHHhhCC
Confidence            3332211  1110                                              011234566889999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 047395          409 PSSRLTAHDALKHPFF  424 (432)
Q Consensus       409 P~~R~ta~elL~hp~f  424 (432)
                      |++||++.++++||||
T Consensus       241 p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         241 PRDRPSVNSILEKNFI  256 (256)
T ss_pred             hhhCcCHHHHhhCcCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.9e-43  Score=328.68  Aligned_cols=257  Identities=23%  Similarity=0.382  Sum_probs=203.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++++.||+|+||.||+|.+..+++.||+|.++..  ......+.+|+.++..+.|     +||+++++.+...+..|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~~~~~~~   75 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVS-----PYIVDFYGAFFIEGAVY   75 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCC-----CcHHhhhhheecCCeEE
Confidence            3689999999999999999999999999999988642  2334567789999988877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          173 IVFEML-GPSLYDFLRKNN-YRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +||||+ +++|.+++.... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.                 
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~-----------------  138 (286)
T cd06622          76 MCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG-----------------  138 (286)
T ss_pred             EEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC-----------------
Confidence            999999 899999987641 1258999999999999999999996 59999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhCCC------CCccchHHHHHHHHHHHHhCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILGLG------WSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~------~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                ++.++|+|||.+..... ......+++.|+|||++.+..      ++.++|||||||++|+|++|..||.
T Consensus       139 ----------~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  208 (286)
T cd06622         139 ----------NGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYP  208 (286)
T ss_pred             ----------CCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence                      45677777777654322 223346788999999986543      5789999999999999999999997


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ..........+.......+.                                             .....++..+.+||.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~li~  243 (286)
T cd06622         209 PETYANIFAQLSAIVDGDPP---------------------------------------------TLPSGYSDDAQDFVA  243 (286)
T ss_pred             CcchhhHHHHHHHHhhcCCC---------------------------------------------CCCcccCHHHHHHHH
Confidence            65443333332222111110                                             011235666889999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +||+.+|++||+++++++||||....
T Consensus       244 ~~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         244 KCLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             HHcccCcccCCCHHHHhcChhhhhcc
Confidence            99999999999999999999997654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=1.8e-42  Score=330.39  Aligned_cols=282  Identities=29%  Similarity=0.528  Sum_probs=222.5

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-C
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-R  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-~  168 (432)
                      +.++|++.+.||.|+||.||+|.+..+++.||||.+...   ......+..|+.++..++|     |||+++++++.. .
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~~~~~~~~~~   82 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRH-----ENIISLSDIFISPL   82 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCC-----CCeeeEeeeEecCC
Confidence            578899999999999999999999999999999987532   2234567789999999887     999999998865 5


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          169 NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       169 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ...|+|+||++++|.+++...   .+++..+..++.||+.||.|||++||+||||||+|||++.                
T Consensus        83 ~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~----------------  143 (328)
T cd07856          83 EDIYFVTELLGTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINE----------------  143 (328)
T ss_pred             CcEEEEeehhccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECC----------------
Confidence            688999999988999988754   4889999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                                 ++.++|+|||.+...........++..|+|||++.+ ..++.++|||||||++|+|++|..||......
T Consensus       144 -----------~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~  212 (328)
T cd07856         144 -----------NCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV  212 (328)
T ss_pred             -----------CCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                       455777777766654444444567889999998866 56889999999999999999999999988887


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcc-hhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPA-EKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .....+.+.++.+|..+........ ..+........+                   .......+.++..+.++|.+||+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~li~~~l~  273 (328)
T cd07856         213 NQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREP-------------------VPFSEKFKNADPSAIDLLEKMLV  273 (328)
T ss_pred             HHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCC-------------------CcHHHHcCCCCHHHHHHHHHHcC
Confidence            7888888888888877655432211 011000000000                   00011223466789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCc
Q 047395          407 YDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .+|++|||+++++.||||....
T Consensus       274 ~~P~~R~t~~ell~~~~~~~~~  295 (328)
T cd07856         274 FDPQKRISAAEALAHPYLAPYH  295 (328)
T ss_pred             CChhhCCCHHHHhcCCcccccc
Confidence            9999999999999999996543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.5e-42  Score=327.83  Aligned_cols=272  Identities=25%  Similarity=0.401  Sum_probs=206.0

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+....    .....+.+|++++..+.|     +||+++++.+..+++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~~~~~   75 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN-----PFVVSMFCSFETKRH   75 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCC-----CCeeeeEEEEecCCE
Confidence            36999999999999999999999999999999987532    233466788888888776     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ |++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||+++.++.+++.|||++.....
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~  153 (305)
T cd05609          76 LCMVMEYVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM  153 (305)
T ss_pred             EEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence            99999999 899999998764  689999999999999999999999999999999999987766666666665431100


Q ss_pred             CccccccCCCCCCeEEeecCCcccc-cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                      ..          ...+.+....... ........++..|+|||.+.+..++.++|||||||++|+|++|..||.+....+
T Consensus       154 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~  223 (305)
T cd05609         154 SL----------TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE  223 (305)
T ss_pred             Cc----------cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            00          0000000000000 001112357889999999988889999999999999999999999998765544


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.......|                       .                       ....++..+.++|.+||+.|
T Consensus       224 ~~~~~~~~~~~~~-----------------------~-----------------------~~~~~~~~~~~li~~~l~~~  257 (305)
T cd05609         224 LFGQVISDDIEWP-----------------------E-----------------------GDEALPADAQDLISRLLRQN  257 (305)
T ss_pred             HHHHHHhcccCCC-----------------------C-----------------------ccccCCHHHHHHHHHHhccC
Confidence            3333222111111                       0                       01134666889999999999


Q ss_pred             CCCCCC---HHHHhcCCCCCCCcc
Q 047395          409 PSSRLT---AHDALKHPFFTRDYY  429 (432)
Q Consensus       409 P~~R~t---a~elL~hp~f~~~~~  429 (432)
                      |++||+   +.++|+||||....+
T Consensus       258 P~~R~~~~~~~~ll~~~~~~~~~~  281 (305)
T cd05609         258 PLERLGTGGAFEVKQHRFFLGLDW  281 (305)
T ss_pred             hhhccCccCHHHHHhCccccCCCH
Confidence            999997   899999999976543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=7.2e-43  Score=323.48  Aligned_cols=256  Identities=26%  Similarity=0.421  Sum_probs=198.9

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----------hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      +|.+...||.|+||.||+|.+..+++.||+|.+....          ...+.+.+|+.++..+.|     +||+++++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~   75 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH-----ENIVQYLGSS   75 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC-----CCeeeEEEEE
Confidence            4788899999999999999999899999999885321          123567789999998877     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ...+..++||||+ +++|.+++....  .+++..+..++.|++.||.|||++|++||||+|+||+++.++.++++|||++
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~  153 (267)
T cd06628          76 LDADHLNIFLEYVPGGSVAALLNNYG--AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGIS  153 (267)
T ss_pred             EeCCccEEEEEecCCCCHHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCC
Confidence            9999999999999 889999998754  6899999999999999999999999999999999999766555555555543


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                      .....+..                  ............|+..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus       154 ~~~~~~~~------------------~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  215 (267)
T cd06628         154 KKLEANSL------------------STKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDC  215 (267)
T ss_pred             cccccccc------------------cCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCc
Confidence            22111000                  000001112345788999999999888999999999999999999999999865


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +.......+....  .                                              ......++..+.++|++|
T Consensus       216 ~~~~~~~~~~~~~--~----------------------------------------------~~~~~~~~~~~~~li~~~  247 (267)
T cd06628         216 TQLQAIFKIGENA--S----------------------------------------------PEIPSNISSEAIDFLEKT  247 (267)
T ss_pred             cHHHHHHHHhccC--C----------------------------------------------CcCCcccCHHHHHHHHHH
Confidence            5433222211100  0                                              001123456688999999


Q ss_pred             cccCCCCCCCHHHHhcCCCC
Q 047395          405 LRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f  424 (432)
                      |+.||.+||++.|+++||||
T Consensus       248 l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         248 FEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             ccCCchhCcCHHHHhhCCCC
Confidence            99999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-42  Score=320.88  Aligned_cols=250  Identities=27%  Similarity=0.464  Sum_probs=194.1

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhhhh----HhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||.|+||.||+|.+..+++.||+|+++......    .....|..++.    ....|+|++++++++..++.+|+|+|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~----~~~~~~~i~~~~~~~~~~~~~~lv~e   77 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMM----IQGESPYVAKLYYSFQSKDYLYLVME   77 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHh----hcCCCCCeeeeeeeEEcCCeEEEEEe
Confidence            57999999999999999999999999986532211    12223332222    22345999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||+.||+|+||+|+||+++.                       
T Consensus        78 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~-----------------------  132 (260)
T cd05611          78 YLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ-----------------------  132 (260)
T ss_pred             ccCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC-----------------------
Confidence            99 999999998754  6899999999999999999999999999999999999654                       


Q ss_pred             cCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Q 047395          256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER  335 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~  335 (432)
                          ++.++|+|||++..... .....++..|+|||.+.+..++.++||||||+++|+|++|..||...+.......+..
T Consensus       133 ----~~~~~l~dfg~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  207 (260)
T cd05611         133 ----TGHLKLTDFGLSRNGLE-NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILS  207 (260)
T ss_pred             ----CCcEEEeecccceeccc-cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence                45577777776654332 2334688899999999988889999999999999999999999987665444333221


Q ss_pred             HhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCH
Q 047395          336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTA  415 (432)
Q Consensus       336 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta  415 (432)
                      ...                       .++.                      .....++..+.++|.+||+.||++|||+
T Consensus       208 ~~~-----------------------~~~~----------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~  242 (260)
T cd05611         208 RRI-----------------------NWPE----------------------EVKEFCSPEAVDLINRLLCMDPAKRLGA  242 (260)
T ss_pred             ccc-----------------------CCCC----------------------cccccCCHHHHHHHHHHccCCHHHccCC
Confidence            110                       0100                      0012356668999999999999999954


Q ss_pred             ---HHHhcCCCCCCCcc
Q 047395          416 ---HDALKHPFFTRDYY  429 (432)
Q Consensus       416 ---~elL~hp~f~~~~~  429 (432)
                         +|+++||||++..+
T Consensus       243 ~~~~~~l~~~~~~~~~~  259 (260)
T cd05611         243 NGYQEIKSHPFFKSINW  259 (260)
T ss_pred             CcHHHHHcChHhhcCCC
Confidence               79999999987654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=6.8e-43  Score=334.60  Aligned_cols=300  Identities=27%  Similarity=0.421  Sum_probs=219.1

Q ss_pred             eecCceEE-EeeeecccceEEEEEEecCCCcEEEEEEeechhhhh---------------HhHHHHHHHHHHHHhcCCCC
Q 047395           92 NLTSRYKI-LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR---------------EAAMTEIDVLELLKRYDRSG  155 (432)
Q Consensus        92 ~~~~~y~i-~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~---------------~~~~~E~~~l~~l~~~~~~~  155 (432)
                      .+.++|.. .+.||.|+||+||+|++..+++.||||+++......               ..+.+|+.++..+.|     
T Consensus         5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----   79 (335)
T PTZ00024          5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH-----   79 (335)
T ss_pred             ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC-----
Confidence            34677875 467999999999999999999999999986432211               146789999998877     


Q ss_pred             CceeEeecccccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCc
Q 047395          156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEY  235 (432)
Q Consensus       156 ~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~  235 (432)
                      +||+++++++...+..|+||||+.++|.+++....  .+++..+..++.||+.||.|||++||+|+||||+||+++.++.
T Consensus        80 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~  157 (335)
T PTZ00024         80 ENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI  157 (335)
T ss_pred             cceeeeeEEEecCCcEEEEEeccccCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCC
Confidence            99999999999999999999999889999997654  5899999999999999999999999999999999999887777


Q ss_pred             cccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHH
Q 047395          236 LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       236 ~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~el  314 (432)
                      ++++|||++...........        .-.+.+.  ..........++..|+|||.+.+. .++.++|||||||++|+|
T Consensus       158 ~kl~dfg~~~~~~~~~~~~~--------~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el  227 (335)
T PTZ00024        158 CKIADFGLARRYGYPPYSDT--------LSKDETM--QRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAEL  227 (335)
T ss_pred             EEECCccceeeccccccccc--------ccccccc--cccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHH
Confidence            77777776543221100000        0000000  000111223568889999998764 468999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          315 CSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       315 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      ++|.+||.+.+..+.+..+....+.++...+.........        .+......             ..........+
T Consensus       228 ~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-------------~~~~~~~~~~~  286 (335)
T PTZ00024        228 LTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLY--------TEFTPRKP-------------KDLKTIFPNAS  286 (335)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccc--------cccCcCCc-------------ccHHHhCcCCC
Confidence            9999999988888877777777665554322211100000        00000000             00011123456


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ..+.++|.+||+.||++|||++|+|.||||++...
T Consensus       287 ~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~  321 (335)
T PTZ00024        287 DDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPL  321 (335)
T ss_pred             hHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCC
Confidence            77899999999999999999999999999998765

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=9.1e-44  Score=307.03  Aligned_cols=254  Identities=24%  Similarity=0.396  Sum_probs=204.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +..+++..||.|+.|.||+++.+.+|...|||.+.+..  .....++..+.++..-    +..|+||+.+++|..+..++
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s----~dcpyIV~c~GyFi~n~dV~  167 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKS----HDCPYIVQCFGYFITNTDVF  167 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhc----cCCCeeeeeeeEEeeCchHH
Confidence            45677889999999999999999999999999997532  3344555566554432    23499999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +.||.+...+..+++.-. .+++|..+-++...++.||.||-+ +||+|||+||+|||                      
T Consensus       168 IcMelMs~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNIL----------------------  224 (391)
T KOG0983|consen  168 ICMELMSTCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNIL----------------------  224 (391)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceE----------------------
Confidence            999999777777777654 579999999999999999999985 69999999999999                      


Q ss_pred             cccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhC---CCCCccchHHHHHHHHHHHHhCCCCCCCCC-
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILIELCSGEALFQTHE-  325 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvil~elltg~~pf~~~~-  325 (432)
                           ++..+.+||||||++.....  ..+...|-+.|||||.+.-   ..|+-.+||||||++++||+||..||.+.+ 
T Consensus       225 -----lDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t  299 (391)
T KOG0983|consen  225 -----LDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT  299 (391)
T ss_pred             -----EccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc
Confidence                 45667888888888876433  3445689999999999853   368999999999999999999999998854 


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      +.+.+..+.....  | .+                                           ......|+.+++|+..||
T Consensus       300 dFe~ltkvln~eP--P-~L-------------------------------------------~~~~gFSp~F~~fv~~CL  333 (391)
T KOG0983|consen  300 DFEVLTKVLNEEP--P-LL-------------------------------------------PGHMGFSPDFQSFVKDCL  333 (391)
T ss_pred             cHHHHHHHHhcCC--C-CC-------------------------------------------CcccCcCHHHHHHHHHHh
Confidence            4555555544211  1 00                                           001236778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ++|+.+||.-.++|+|||+..
T Consensus       334 ~kd~r~RP~Y~~Ll~h~Fi~~  354 (391)
T KOG0983|consen  334 TKDHRKRPKYNKLLEHPFIKR  354 (391)
T ss_pred             hcCcccCcchHHHhcCcceee
Confidence            999999999999999999865

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=1e-42  Score=325.69  Aligned_cols=278  Identities=31%  Similarity=0.533  Sum_probs=212.0

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|++.++||+|+||.||+|.+..+++.||+|++....   ...+.+.+|++++..+.|     +||+++++++..++..
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~   75 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH-----ENLVNLIEVFRRKKRL   75 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCC-----cchhhHHHhcccCCeE
Confidence            46999999999999999999999899999999875322   234567789998888877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|..+.....  .+++..++.++.||+.||.|||+.||+|+||+|+||++++                  
T Consensus        76 ~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~------------------  135 (286)
T cd07846          76 YLVFEFVDHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ------------------  135 (286)
T ss_pred             EEEEecCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC------------------
Confidence            9999999 777777665443  5899999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                               ++.++|+|||++......   .....++..|+|||++.+. .++.++|||||||++|+|++|.+||.....
T Consensus       136 ---------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~  206 (286)
T cd07846         136 ---------SGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD  206 (286)
T ss_pred             ---------CCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch
Confidence                     456777777766543221   1234578899999998764 467899999999999999999999988777


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+....+....+..+............  ...  ...+....              ........+.++..+.+||.+||+
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~--------------~~~~~~~~~~~~~~~~~li~~~l~  268 (286)
T cd07846         207 IDQLYHIIKCLGNLIPRHQEIFQKNPL--FAG--MRLPEVKE--------------IEPLEKRFPKLSGLVLDLAKQCLR  268 (286)
T ss_pred             HHHHHHHHHHhCCCchhhHHHhccchH--hhc--cccccccC--------------cchHHHhCCCcCHHHHHHHHHHhc
Confidence            777777777666654432221111100  000  00000000              000111234567889999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 047395          407 YDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f  424 (432)
                      .||++|||+.++++||||
T Consensus       269 ~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         269 IDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             CCcccchhHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.1e-42  Score=322.41  Aligned_cols=253  Identities=26%  Similarity=0.467  Sum_probs=202.5

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-------hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      +|+..+.||+|+||.||+|.+..+++.||+|+++...       .....+.+|+.+++.++|     +|++++++++...
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~   75 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNH-----PHIIRMLGATCED   75 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCC-----CceehhhceeccC
Confidence            4788899999999999999999999999999986322       234678889999999887     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +..++|+||+ +++|.+++.+..  ++++..+..++.||+.||.|||++|++|+||||+||+++.++             
T Consensus        76 ~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~-------------  140 (268)
T cd06630          76 SHFNLFVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG-------------  140 (268)
T ss_pred             CeEEEEEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-------------
Confidence            9999999999 899999998754  689999999999999999999999999999999999975432             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC-------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                   ..++|+|||.+......       .....||..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       141 -------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p  207 (268)
T cd06630         141 -------------QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPP  207 (268)
T ss_pred             -------------CEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCC
Confidence                         24677777766543221       1234678899999999888899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...........+.......                                            ......+..+..+.++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~  243 (268)
T cd06630         208 WNAEKHSNHLALIFKIASAT--------------------------------------------TAPSIPEHLSPGLRDV  243 (268)
T ss_pred             CCCCCCcchHHHHHHHhccC--------------------------------------------CCCCCchhhCHHHHHH
Confidence            97544322222221110000                                            0001112345668899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCC
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~  425 (432)
                      |.+||..||++|||+.++++||||+
T Consensus       244 i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         244 TLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHcCCCcccCcCHHHHhcCcccC
Confidence            9999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=1.6e-42  Score=323.40  Aligned_cols=252  Identities=26%  Similarity=0.436  Sum_probs=191.7

Q ss_pred             eeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEcc
Q 047395          102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEM  177 (432)
Q Consensus       102 ~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  177 (432)
                      .||+|+||.||+|.+..+++.+|+|.+....    .......+|..++..+..  ..|++++.+++++...+..++||||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~lv~e~   78 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMTYAFHTPDKLCFILDL   78 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhh--CCCCcEeEEEEEEecCCeEEEEEec
Confidence            4899999999999999999999999986432    112233445544444432  2459999999999988999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccccc
Q 047395          178 L-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR  256 (432)
Q Consensus       178 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  256 (432)
                      + +++|.+++..+.  .+++..+..++.||+.||.|||++||+||||||+|||++.+                       
T Consensus        79 ~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~-----------------------  133 (279)
T cd05633          79 MNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH-----------------------  133 (279)
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC-----------------------
Confidence            9 999999998764  69999999999999999999999999999999999996554                       


Q ss_pred             CCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 047395          257 LPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME  334 (432)
Q Consensus       257 ~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~  334 (432)
                          +.++|+|||++..... ......||..|+|||.+.+ ..++.++|||||||++|+|++|..||......... .+.
T Consensus       134 ----~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~  208 (279)
T cd05633         134 ----GHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EID  208 (279)
T ss_pred             ----CCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHH
Confidence                4566666666543222 1223468999999999874 56889999999999999999999999754321111 010


Q ss_pred             HHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCC-
Q 047395          335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRL-  413 (432)
Q Consensus       335 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-  413 (432)
                      ......                                             ....++.++..+.++|.+||..||++|+ 
T Consensus       209 ~~~~~~---------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~  243 (279)
T cd05633         209 RMTLTV---------------------------------------------NVELPDSFSPELKSLLEGLLQRDVSKRLG  243 (279)
T ss_pred             HHhhcC---------------------------------------------CcCCccccCHHHHHHHHHHhcCCHHHhcC
Confidence            000000                                             0011234566789999999999999999 


Q ss_pred             ----CHHHHhcCCCCCCCccC
Q 047395          414 ----TAHDALKHPFFTRDYYR  430 (432)
Q Consensus       414 ----ta~elL~hp~f~~~~~~  430 (432)
                          |++++++||||+...+.
T Consensus       244 ~~~~~~~~~~~h~~~~~~~~~  264 (279)
T cd05633         244 CLGRGAQEVKEHVFFKGIDWQ  264 (279)
T ss_pred             CCCCCHHHHHhCccccCCCHh
Confidence                69999999999986553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-43  Score=345.54  Aligned_cols=245  Identities=29%  Similarity=0.430  Sum_probs=198.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEee-chhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc-ccc----
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW-FDY----  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~-~~~----  167 (432)
                      ..+++|.+.|.+|||+.||+|.+...|..||+|.+- .+......+.+|+++++.|+.    |+|||.+++. ...    
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~g----h~nIV~yidss~~~~~~~  111 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSG----HKNIVSYIDSSAINRSSN  111 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcC----CCceeeEeccccccccCC
Confidence            347999999999999999999999988999999875 345566788999999999984    4999999993 321    


Q ss_pred             --CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cEeccCCCCcEEeecCCccccCCcc
Q 047395          168 --RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       168 --~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                        .-.+.|+|||| ||+|-|+|.......|++.++++|+.|+++|+.+||...  |||||||-+||||.           
T Consensus       112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls-----------  180 (738)
T KOG1989|consen  112 NGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS-----------  180 (738)
T ss_pred             CceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc-----------
Confidence              13689999999 799999999766667999999999999999999999987  99999999999954           


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCCcc------------ccccCCCcchhHHH---hCCCCCccchHHHH
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN------------YIVSTRHYRAPEVI---LGLGWSYPCDMWSV  307 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------------~~~gt~~y~aPE~~---~~~~~~~~sDiwSl  307 (432)
                                      .++..||||||.+........            ....|+.|+|||++   .+..++.|+|||||
T Consensus       181 ----------------~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWAL  244 (738)
T KOG1989|consen  181 ----------------ADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWAL  244 (738)
T ss_pred             ----------------CCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHH
Confidence                            556788888887754332221            12359999999988   46679999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhh
Q 047395          308 GCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM  387 (432)
Q Consensus       308 Gvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (432)
                      ||+||-|+....||.......                           +.++...+|.                      
T Consensus       245 GclLYkLCy~t~PFe~sg~la---------------------------Ilng~Y~~P~----------------------  275 (738)
T KOG1989|consen  245 GCLLYKLCYFTTPFEESGKLA---------------------------ILNGNYSFPP----------------------  275 (738)
T ss_pred             HHHHHHHHHhCCCcCcCccee---------------------------EEeccccCCC----------------------
Confidence            999999999999998643211                           2223333332                      


Q ss_pred             hhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       388 ~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                        .+.++..+.+||+.||+.||.+||++-|++.
T Consensus       276 --~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~  306 (738)
T KOG1989|consen  276 --FPNYSDRLKDLIRTMLQPNPDERPNIYQVLE  306 (738)
T ss_pred             --CccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence              2456777999999999999999999999884

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.6e-43  Score=323.71  Aligned_cols=255  Identities=26%  Similarity=0.432  Sum_probs=201.1

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC----
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR----  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~----  168 (432)
                      ..++|++.+.||.|++|.||+|.+..+++.+++|++.......+.+.+|+.++..+..    |+||+++++++...    
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~----h~~i~~~~~~~~~~~~~~   79 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSN----HPNIATFYGAFIKKNPPG   79 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcC----CCChheEEEEEEecCCCC
Confidence            3578999999999999999999999899999999998665556778899999998842    39999999998653    


Q ss_pred             --CeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          169 --NHICIVFEML-GPSLYDFLRKNN--YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       169 --~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                        ..+|+||||+ +++|.+++....  ...+++..+..++.|++.||.|||++||+|+||+|+||+++.           
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~-----------  148 (275)
T cd06608          80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTK-----------  148 (275)
T ss_pred             cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEcc-----------
Confidence              4589999999 889999987533  346899999999999999999999999999999999999654           


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCC-----CCCccchHHHHHHHHHHHH
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGL-----GWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-----~~~~~sDiwSlGvil~ell  315 (432)
                                      ++.++|+|||++.....   ......|+..|+|||++...     .++.++|||||||++|+|+
T Consensus       149 ----------------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~  212 (275)
T cd06608         149 ----------------NAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELA  212 (275)
T ss_pred             ----------------CCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHH
Confidence                            44566666666544322   12234688999999998642     4678899999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchH
Q 047395          316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG  395 (432)
Q Consensus       316 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (432)
                      +|..||...........+....  .+                    .                        ......++.
T Consensus       213 ~g~~p~~~~~~~~~~~~~~~~~--~~--------------------~------------------------~~~~~~~~~  246 (275)
T cd06608         213 DGKPPLCDMHPMRALFKIPRNP--PP--------------------T------------------------LKSPENWSK  246 (275)
T ss_pred             hCCCCccccchHHHHHHhhccC--CC--------------------C------------------------CCchhhcCH
Confidence            9999997654433332221110  00                    0                        000123456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          396 YLIDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       396 ~l~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      .+.+||.+||..||++|||+.|+++|||+
T Consensus       247 ~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         247 KFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            68899999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=5.1e-43  Score=324.53  Aligned_cols=252  Identities=25%  Similarity=0.397  Sum_probs=197.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.++..++|     +||+++++++..++..+
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h-----~~ii~~~~~~~~~~~~~   82 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKH-----CNIVAYFGSYLSREKLW   82 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCC-----CCeeeeeEEEEeCCEEE
Confidence            457999999999999999999999999999999986432 234457789999888877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++....  .+++..+..++.|++.||.|||+.||+||||||+||+++.+                  
T Consensus        83 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~------------------  142 (267)
T cd06646          83 ICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDN------------------  142 (267)
T ss_pred             EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC------------------
Confidence            999999 889999997654  68999999999999999999999999999999999997554                  


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHh---CCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                               +.++|+|||++......   .....|+..|+|||.+.   ...++.++|||||||++|+|++|..||....
T Consensus       143 ---------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~  213 (267)
T cd06646         143 ---------GDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH  213 (267)
T ss_pred             ---------CCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence                     44666666665543211   22346888999999985   3347889999999999999999999996443


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .......+....                       ...+.                     ......++..+.+||++||
T Consensus       214 ~~~~~~~~~~~~-----------------------~~~~~---------------------~~~~~~~~~~~~~li~~~l  249 (267)
T cd06646         214 PMRALFLMSKSN-----------------------FQPPK---------------------LKDKTKWSSTFHNFVKISL  249 (267)
T ss_pred             hhhhheeeecCC-----------------------CCCCC---------------------CccccccCHHHHHHHHHHh
Confidence            222111100000                       00000                     0001234567899999999


Q ss_pred             ccCCCCCCCHHHHhcCCC
Q 047395          406 RYDPSSRLTAHDALKHPF  423 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~  423 (432)
                      +.||++|||++++|+|+|
T Consensus       250 ~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         250 TKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             hCChhhCcCHHHHhcCCC
Confidence            999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7.1e-43  Score=333.79  Aligned_cols=279  Identities=30%  Similarity=0.527  Sum_probs=219.6

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC---
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN---  169 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~---  169 (432)
                      +|++.+.||.|+||.||+|++..+++.||||.+...   ......+.+|+.+++.++|     +|++++++++....   
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~   75 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRH-----ENIIGLLDILRPPSPED   75 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCC-----cchhhhhhhhcccCccc
Confidence            689999999999999999999989999999998643   2334567889999998876     99999999987764   


Q ss_pred             --eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          170 --HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       170 --~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                        .+|+||||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+              
T Consensus        76 ~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~--------------  139 (330)
T cd07834          76 FNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN--------------  139 (330)
T ss_pred             ccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--------------
Confidence              899999999889999997654  79999999999999999999999999999999999997654              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                   +.++|+|||.+......      .....+|..|+|||++.+. .++.++|||||||++|+|++|.+|
T Consensus       140 -------------~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~p  206 (330)
T cd07834         140 -------------CDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPL  206 (330)
T ss_pred             -------------CCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCC
Confidence                         45666666655543322      2234678899999999887 789999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCC-cchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDK-PAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      |.+.+..+....+....+.++...+..... ....++...                  ...... ......+..+..+.+
T Consensus       207 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~-~~~~~~~~~~~~~~~  267 (330)
T cd07834         207 FPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSL------------------PKKPKK-PLSKLFPGASPEAID  267 (330)
T ss_pred             cCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhc------------------ccCCcc-hhHHhcccCCHHHHH
Confidence            999988888888888887776654432111 111111100                  000000 011122346778999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||.+||++||++|||++++++||||++.
T Consensus       268 li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         268 LLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             HHHHHccCChhhCCCHHHHHhCccHHhh
Confidence            9999999999999999999999999764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=2.1e-42  Score=318.14  Aligned_cols=250  Identities=26%  Similarity=0.388  Sum_probs=205.4

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+...   ......+.+|+.+++.++|     +|++++++.+..++..+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~~~~~~~   75 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSH-----PNIIEYYENFLEDKALM   75 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCC-----CchhheeeeEecCCEEE
Confidence            589999999999999999999999999999998643   2334567889999998877     99999999999899999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++.......+++..+..++.|++.||+|||++||+|+||||+||+++.+                  
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~------------------  137 (256)
T cd08220          76 IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKH------------------  137 (256)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC------------------
Confidence            999999 8999999987654568999999999999999999999999999999999997532                  


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                              ...++|+|||.+.......  ....|+..|+|||.+.+..++.++||||||+++|+|++|..||...+....
T Consensus       138 --------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~  209 (256)
T cd08220         138 --------KMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL  209 (256)
T ss_pred             --------CCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH
Confidence                    3346778888776543322  234688899999999988889999999999999999999999987654443


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+.....                                                ....+.++..+.++|.+||..||
T Consensus       210 ~~~~~~~~~------------------------------------------------~~~~~~~~~~l~~li~~~l~~~p  241 (256)
T cd08220         210 VLKIMSGTF------------------------------------------------APISDRYSPDLRQLILSMLNLDP  241 (256)
T ss_pred             HHHHHhcCC------------------------------------------------CCCCCCcCHHHHHHHHHHccCCh
Confidence            322211100                                                00112345668899999999999


Q ss_pred             CCCCCHHHHhcCCCC
Q 047395          410 SSRLTAHDALKHPFF  424 (432)
Q Consensus       410 ~~R~ta~elL~hp~f  424 (432)
                      ++|||+.|+++||||
T Consensus       242 ~~Rpt~~~ll~~p~~  256 (256)
T cd08220         242 SKRPQLSQIMAQPIC  256 (256)
T ss_pred             hhCCCHHHHhhCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=9.7e-43  Score=321.01  Aligned_cols=249  Identities=25%  Similarity=0.403  Sum_probs=202.1

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      +|++.+.||.|+||.||+|.+..+++.||+|++....    .....+.+|+++++.++|     +||+++++.+..+...
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~   75 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNH-----PFLVNLWYSFQDEENM   75 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCC-----CChHHHHHhhcCCCeE
Confidence            5899999999999999999999999999999997432    334577889999988877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+|+||+ +++|.+++....  ++++..+..++.||++||.|||++||+|+||||+||+++++                 
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~-----------------  136 (258)
T cd05578          76 YLVVDLLLGGDLRYHLSQKV--KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQ-----------------  136 (258)
T ss_pred             EEEEeCCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCC-----------------
Confidence            9999999 999999998763  69999999999999999999999999999999999996554                 


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                +.++|+|||.+......  .....|+..|+|||++.+..++.++|+||||+++|+|++|..||...+...
T Consensus       137 ----------~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~  206 (258)
T cd05578         137 ----------GHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI  206 (258)
T ss_pred             ----------CCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH
Confidence                      45666777665543322  223467889999999998889999999999999999999999998765421


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ............                                              ...+...+..+.++|.+||+.|
T Consensus       207 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~i~~~l~~~  240 (258)
T cd05578         207 RDQIRAKQETAD----------------------------------------------VLYPATWSTEAIDAINKLLERD  240 (258)
T ss_pred             HHHHHHHhcccc----------------------------------------------ccCcccCcHHHHHHHHHHccCC
Confidence            111110000000                                              0111234566889999999999


Q ss_pred             CCCCCCH--HHHhcCCCC
Q 047395          409 PSSRLTA--HDALKHPFF  424 (432)
Q Consensus       409 P~~R~ta--~elL~hp~f  424 (432)
                      |.+||++  +|+++||||
T Consensus       241 p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         241 PQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             hhHcCCccHHHHhcCCCC
Confidence            9999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=2.8e-42  Score=326.74  Aligned_cols=294  Identities=27%  Similarity=0.418  Sum_probs=214.3

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh---hhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--  167 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--  167 (432)
                      ..++|++.++||.|+||.||+|.+..+++.||||++.....   ......+|+++++.++|     +||+++++++..  
T Consensus         6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~   80 (311)
T cd07866           6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKH-----PNVVPLIDMAVERP   80 (311)
T ss_pred             ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCC-----CCccchhhheeccc
Confidence            35789999999999999999999999999999999864221   22356789999998877     999999987643  


Q ss_pred             ------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCc
Q 047395          168 ------RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       168 ------~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                            ...+++||||++++|.+.+.... ..+++..++.++.||++||.|||++||+|+||||+||++++++.++++||
T Consensus        81 ~~~~~~~~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~df  159 (311)
T cd07866          81 DKSKRKRGSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADF  159 (311)
T ss_pred             ccccccCceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcC
Confidence                  33579999999888988887543 36999999999999999999999999999999999999887777777777


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCC
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~p  320 (432)
                      |++...........            .+. ...........+++.|+|||++.+. .++.++|||||||++|+|++|++|
T Consensus       160 g~~~~~~~~~~~~~------------~~~-~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~  226 (311)
T cd07866         160 GLARPYDGPPPNPK------------GGG-GGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPI  226 (311)
T ss_pred             ccchhccCCCcccc------------cCC-cccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCC
Confidence            66543221110000            000 0001112234678899999998764 578999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+.......+....+.++...+...........      +.......             ..........+..+.+|
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-------------~~~~~~~~~~~~~~~~~  287 (311)
T cd07866         227 LQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEG------VHSFTNYP-------------RTLEERFGKLGPEGLDL  287 (311)
T ss_pred             CCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccc------cccCCCCC-------------ccHHHHcccCChhHHHH
Confidence            999888888888777776655443322211110000      00000000             00011122344668999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCC
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      |.+||+.||++|||+.|++.||||
T Consensus       288 i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         288 LSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHHHcccCcccCcCHHHHhcCCCC
Confidence            999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=3.4e-42  Score=316.90  Aligned_cols=249  Identities=29%  Similarity=0.474  Sum_probs=204.4

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.+.||.|+||.||.+++..+++.+++|.+...   ......+.+|+.+++.+.|     +||+++++++...+..+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h-----~~i~~~~~~~~~~~~~~   75 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQH-----PNIIAYYNHFMDDNTLL   75 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCC-----CCeeEEEeEEecCCeEE
Confidence            599999999999999999999999999999987632   3444567889999998876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      ++|||+ +++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++.++                 
T Consensus        76 ~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~-----------------  138 (256)
T cd08221          76 IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG-----------------  138 (256)
T ss_pred             EEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC-----------------
Confidence            999999 89999999876445689999999999999999999999999999999999976544                 


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                .+||+|||.+......   .....|++.|+|||++.+..++.++|||||||++|+|++|..||...+..+
T Consensus       139 ----------~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~  208 (256)
T cd08221         139 ----------LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN  208 (256)
T ss_pred             ----------CEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                      4566666655433222   133468999999999998888999999999999999999999998766554


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+..  +..+.                                              ....++..+.++|.+||..|
T Consensus       209 ~~~~~~~--~~~~~----------------------------------------------~~~~~~~~~~~~i~~~l~~~  240 (256)
T cd08221         209 LVVKIVQ--GNYTP----------------------------------------------VVSVYSSELISLVHSLLQQD  240 (256)
T ss_pred             HHHHHHc--CCCCC----------------------------------------------CccccCHHHHHHHHHHcccC
Confidence            4433321  11000                                              01234566889999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 047395          409 PSSRLTAHDALKHPFF  424 (432)
Q Consensus       409 P~~R~ta~elL~hp~f  424 (432)
                      |.+|||+.++++|||+
T Consensus       241 p~~R~s~~~ll~~~~l  256 (256)
T cd08221         241 PEKRPTADEVLDQPLL  256 (256)
T ss_pred             cccCCCHHHHhhCcCC
Confidence            9999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-44  Score=324.23  Aligned_cols=256  Identities=25%  Similarity=0.405  Sum_probs=218.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ..+|.++.+||+|+||.|.+|..+.+.+.+|||++++.-    ...+--+.|.++|.....    .|.+++++..|+.-+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~k----ppFL~qlHScFQTmD  423 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK----PPFLVQLHSCFQTMD  423 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCC----CchHHHHHHHhhhhh
Confidence            467999999999999999999999999999999998642    223344566666665443    488999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ ||+|.-.|++-+  .+.+..+..++..|+-||-+||++|||.||||.+|||++                 
T Consensus       424 RLyFVMEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd-----------------  484 (683)
T KOG0696|consen  424 RLYFVMEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD-----------------  484 (683)
T ss_pred             heeeEEEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEec-----------------
Confidence            999999999 999998888865  799999999999999999999999999999999999954                 


Q ss_pred             CCccccccCCCCCCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                ..+.+||+|||+++..   .....++||||.|+|||++...+|+.++|+||+||+||||+.|++||.+.+
T Consensus       485 ----------~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD  554 (683)
T KOG0696|consen  485 ----------SEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED  554 (683)
T ss_pred             ----------cCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC
Confidence                      5566777777776642   334566899999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      +.+..+.|.+.....|.                                                 ..|.++.+++...|
T Consensus       555 E~elF~aI~ehnvsyPK-------------------------------------------------slSkEAv~ickg~l  585 (683)
T KOG0696|consen  555 EDELFQAIMEHNVSYPK-------------------------------------------------SLSKEAVAICKGLL  585 (683)
T ss_pred             HHHHHHHHHHccCcCcc-------------------------------------------------cccHHHHHHHHHHh
Confidence            99999888776554443                                                 44666889999999


Q ss_pred             ccCCCCCCC-----HHHHhcCCCCCCCccCC
Q 047395          406 RYDPSSRLT-----AHDALKHPFFTRDYYRR  431 (432)
Q Consensus       406 ~~dP~~R~t-----a~elL~hp~f~~~~~~~  431 (432)
                      ...|.+|+.     -.+|-.||||+...|++
T Consensus       586 tK~P~kRLGcg~~ge~di~~H~FFR~iDWek  616 (683)
T KOG0696|consen  586 TKHPGKRLGCGPEGERDIREHPFFRRIDWEK  616 (683)
T ss_pred             hcCCccccCCCCccccchhhCcchhhccHHH
Confidence            999999995     47899999999988765

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1.7e-42  Score=323.85  Aligned_cols=258  Identities=22%  Similarity=0.420  Sum_probs=197.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++.+.||+|+||.||+|++..+|+.||||.++...  .....+..|+.++.+..    .|+|++++++++...+..|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~----~~~~iv~~~~~~~~~~~~~   76 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSV----DCPYTVTFYGALFREGDVW   76 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHc----CCCCeeeeeEEEecCCcEE
Confidence            46999999999999999999999999999999987432  22334455655433322    3499999999999999999


Q ss_pred             EEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          173 IVFEMLGPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +||||+.++|.+++...  ....+++..++.++.||+.||.|||++ +++||||||+|||++.                 
T Consensus        77 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~-----------------  139 (283)
T cd06617          77 ICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR-----------------  139 (283)
T ss_pred             EEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC-----------------
Confidence            99999988999888753  224689999999999999999999997 9999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhC----CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILG----LGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~----~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                ++.+||+|||.+......  .....|+..|+|||++.+    ..++.++|||||||++|+|++|..||..
T Consensus       140 ----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  209 (283)
T cd06617         140 ----------NGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS  209 (283)
T ss_pred             ----------CCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence                      445677777766543222  122467889999999865    3468899999999999999999999964


Q ss_pred             CC-cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          324 HE-NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       324 ~~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      .. ..+.+..+..  +..+                    ..                         ....++..+.+||.
T Consensus       210 ~~~~~~~~~~~~~--~~~~--------------------~~-------------------------~~~~~~~~l~~li~  242 (283)
T cd06617         210 WKTPFQQLKQVVE--EPSP--------------------QL-------------------------PAEKFSPEFQDFVN  242 (283)
T ss_pred             cccCHHHHHHHHh--cCCC--------------------CC-------------------------CccccCHHHHHHHH
Confidence            32 2222211111  0000                    00                         01134567899999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCccC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRDYYR  430 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~~~~  430 (432)
                      +||..+|++|||++++++||||.+...+
T Consensus       243 ~~l~~~p~~Rp~~~~il~~~~~~~~~~~  270 (283)
T cd06617         243 KCLKKNYKERPNYPELLQHPFFELHLSK  270 (283)
T ss_pred             HHccCChhhCcCHHHHhcCchhhhcccc
Confidence            9999999999999999999999987654

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.3e-43  Score=334.35  Aligned_cols=253  Identities=26%  Similarity=0.396  Sum_probs=215.1

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      -...|.+.+.||+|.|++|.+|++..++..||||++.+..   .......+|+++++.|.|     ||||+++.+.+...
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~H-----PnIvkl~~v~~t~~  128 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNH-----PNIVKLFSVIETEA  128 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCC-----cceeeeeeeeeecc
Confidence            3567999999999999999999999999999999997643   333457889999999988     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ +|.+++++.+++  .+.+..++.++.|++.|++|||+++|||||||.+|||                   
T Consensus       129 ~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNil-------------------  187 (596)
T KOG0586|consen  129 TLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENIL-------------------  187 (596)
T ss_pred             eeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcc-------------------
Confidence            999999999 999999999986  6888999999999999999999999999999999999                   


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                              ++.+..+||+|||++.....  ...+.||++.|.|||++.+..| ++.+|+||+|++||-|+.|..||.+.+
T Consensus       188 --------L~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~  259 (596)
T KOG0586|consen  188 --------LDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN  259 (596)
T ss_pred             --------cccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc
Confidence                    55667799999998876543  3456899999999999999887 588999999999999999999999866


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      -.+........                       ....                          +-..+.++.+||+++|
T Consensus       260 lk~Lr~rvl~g-----------------------k~rI--------------------------p~~ms~dce~lLrk~l  290 (596)
T KOG0586|consen  260 LKELRPRVLRG-----------------------KYRI--------------------------PFYMSCDCEDLLRKFL  290 (596)
T ss_pred             cccccchheee-----------------------eecc--------------------------cceeechhHHHHHHhh
Confidence            43322221111                       1111                          1134555789999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCc
Q 047395          406 RYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ..||.+|++.+++..|.|....+
T Consensus       291 vl~Pskr~~~dqim~~~W~n~~~  313 (596)
T KOG0586|consen  291 VLNPSKRGPCDQIMKDRWRNDLL  313 (596)
T ss_pred             ccCccccCCHHHhhhhcccchhh
Confidence            99999999999999999987654

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-43  Score=299.56  Aligned_cols=251  Identities=24%  Similarity=0.308  Sum_probs=198.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC----
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR----  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~----  168 (432)
                      .+||+|.+.||+|||+.||+++...+++.+|+|.+... ....+..++|++..+++++     ||+++++++...+    
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s-----~~vl~l~dh~l~~~~D~   94 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNS-----PNVLRLVDHQLREEKDG   94 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCC-----cchHHHHHHHHHhhccC
Confidence            46999999999999999999999999999999998744 3667889999999999988     9999998876432    


Q ss_pred             -CeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC--cEeccCCCCcEEeecCCccccCCcc
Q 047395          169 -NHICIVFEML-GPSLYDFLRKNN--YRPFPVDLVREIGRQLLECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       169 -~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                       ...||+++|. .|+|.+.+....  +.-+++.++..|+.+|++||++||+..  ++||||||.|||+.           
T Consensus        95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls-----------  163 (302)
T KOG2345|consen   95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS-----------  163 (302)
T ss_pred             ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec-----------
Confidence             4599999998 999999988542  235899999999999999999999998  99999999999954           


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCCc------------cccccCCCcchhHHHhC---CCCCccchHHHH
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH------------NYIVSTRHYRAPEVILG---LGWSYPCDMWSV  307 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------------~~~~gt~~y~aPE~~~~---~~~~~~sDiwSl  307 (432)
                                      ..+.++|.|||.+....-..            ..-..|..|+|||++.-   ...+.++|||||
T Consensus       164 ----------------~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSL  227 (302)
T KOG2345|consen  164 ----------------DSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSL  227 (302)
T ss_pred             ----------------CCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhh
Confidence                            45678888888765422111            11235889999999964   357899999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhh
Q 047395          308 GCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM  387 (432)
Q Consensus       308 Gvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (432)
                      ||+||.|+.|..||...         ...            .....-.+.++...||+.                     
T Consensus       228 GCtLYa~mf~~sPfe~~---------~~~------------GgSlaLAv~n~q~s~P~~---------------------  265 (302)
T KOG2345|consen  228 GCTLYAMMFGESPFERI---------YQQ------------GGSLALAVQNAQISIPNS---------------------  265 (302)
T ss_pred             hHHHHHHHHcCCcchHH---------hhc------------CCeEEEeeeccccccCCC---------------------
Confidence            99999999999999521         110            111122233344444432                     


Q ss_pred             hhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       388 ~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                         ..++..+.+||+.||+.||.+||++.+++.+
T Consensus       266 ---~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  266 ---SRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             ---CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence               2366778999999999999999999999864

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=2.1e-42  Score=320.15  Aligned_cols=255  Identities=25%  Similarity=0.408  Sum_probs=201.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++.+.||.|+||+||+|....++..+|+|++...  ......+.+|+.+++.+.|     +|++++++.+...+..+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~   75 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNH-----PNVVKYYTSFVVGDELW   75 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCC-----CCEEEEEEEEeeCCEEE
Confidence            4699999999999999999999889999999998632  2345678889998888876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          173 IVFEML-GPSLYDFLRKNNY-RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +|||++ +++|.+++..... ..+++..+..++.||+.||.|||++||+|+||||+||++++++                
T Consensus        76 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~----------------  139 (267)
T cd06610          76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG----------------  139 (267)
T ss_pred             EEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC----------------
Confidence            999999 9999999986532 4589999999999999999999999999999999999976544                


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC-------CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ-------EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                 .++|+|||++.....       ......|+..|+|||++... .++.++|+|||||++|+|++|+.||.
T Consensus       140 -----------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~  208 (267)
T cd06610         140 -----------SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYS  208 (267)
T ss_pred             -----------CEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcc
Confidence                       455556655433221       11234688999999999877 68899999999999999999999997


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ..+...........   .+.                   .++..                     .....++..+.++|.
T Consensus       209 ~~~~~~~~~~~~~~---~~~-------------------~~~~~---------------------~~~~~~~~~~~~li~  245 (267)
T cd06610         209 KYPPMKVLMLTLQN---DPP-------------------SLETG---------------------ADYKKYSKSFRKMIS  245 (267)
T ss_pred             ccChhhhHHHHhcC---CCC-------------------CcCCc---------------------cccccccHHHHHHHH
Confidence            65543322221111   000                   00000                     001245667889999


Q ss_pred             HccccCCCCCCCHHHHhcCCCC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      +||+.||++|||+.++++||||
T Consensus       246 ~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         246 LCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHcCCChhhCcCHHHHhhCCCC
Confidence            9999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=1.2e-42  Score=323.80  Aligned_cols=252  Identities=26%  Similarity=0.437  Sum_probs=199.3

Q ss_pred             eecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          103 IGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       103 lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      ||+|+||+||+|.+..+|+.||+|++....    .....+..|++++..++|     +|++++++.+...+..|+||||+
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS-----RFIVSLAYAFETKDDLCLVMTLM   75 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC-----CCEeeeeeEEecCCeEEEEEecC
Confidence            689999999999999999999999986422    223455678999988876     99999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccC
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL  257 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  257 (432)
                       +++|.+++.......+++..+..++.|++.||.|||++||+||||+|+||+++.+                        
T Consensus        76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~------------------------  131 (277)
T cd05577          76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDH------------------------  131 (277)
T ss_pred             CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC------------------------
Confidence             8999999987654569999999999999999999999999999999999996544                        


Q ss_pred             CCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Q 047395          258 PKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER  335 (432)
Q Consensus       258 ~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~  335 (432)
                         +.++|+|||.+.....  ......++..|+|||++.+..++.++|||||||++|+|++|+.||...........+..
T Consensus       132 ---~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  208 (277)
T cd05577         132 ---GNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR  208 (277)
T ss_pred             ---CCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh
Confidence               4566666666544321  11234578899999999888899999999999999999999999976543211111111


Q ss_pred             HhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCC--
Q 047395          336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRL--  413 (432)
Q Consensus       336 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~--  413 (432)
                      ....                                             ......+..++.+.++|.+||+.||++||  
T Consensus       209 ~~~~---------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  243 (277)
T cd05577         209 RTLE---------------------------------------------MAVEYPDKFSPEAKDLCEALLQKDPEKRLGC  243 (277)
T ss_pred             cccc---------------------------------------------ccccCCccCCHHHHHHHHHHccCChhHccCC
Confidence            0000                                             00011234566789999999999999999  


Q ss_pred             ---CHHHHhcCCCCCCCccCC
Q 047395          414 ---TAHDALKHPFFTRDYYRR  431 (432)
Q Consensus       414 ---ta~elL~hp~f~~~~~~~  431 (432)
                         ++.++++||||.+..+++
T Consensus       244 ~~~~~~~ll~h~~~~~~~~~~  264 (277)
T cd05577         244 RGGSADEVREHPLFKDLNWRR  264 (277)
T ss_pred             CcccHHHHHhChhhhcCChhh
Confidence               899999999998877754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=3e-42  Score=321.93  Aligned_cols=276  Identities=35%  Similarity=0.620  Sum_probs=216.6

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      |++.+.||.|++|.||+|.+..+++.+|+|.++...   .....+.+|+.+++.++|     ++++++++++..+...++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~~   75 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH-----PNIIKLLDVFRHKGDLYL   75 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcC-----CCcchHHHhhccCCCEEE
Confidence            677899999999999999999999999999986432   234567789999998877     999999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          174 VFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       174 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |+||+.++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.                     
T Consensus        76 v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~---------------------  133 (283)
T cd05118          76 VFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINT---------------------  133 (283)
T ss_pred             EEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECC---------------------
Confidence            99999779999988754 46999999999999999999999999999999999999654                     


Q ss_pred             cccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                            ++.++|+|||.+.......   ....++..|+|||.+.+. .++.++|||||||++|+|++|+.||...+..+.
T Consensus       134 ------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~  207 (283)
T cd05118         134 ------EGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ  207 (283)
T ss_pred             ------CCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                  4557777777665443322   224578889999999877 688999999999999999999999998888777


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+....+......+..........    ....+.....              . .....+.++..+.++|.+||+.||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--------------~-~~~~~~~~~~~~~~~i~~~l~~~P  268 (283)
T cd05118         208 LFKIFRTLGTPDPEVWPKFTSLARNY----KFSFPKKAGM--------------P-LPKLFPNASPQALDLLSQMLHYDP  268 (283)
T ss_pred             HHHHHHHcCCCchHhcccchhhhhhh----hhhhcccccc--------------C-HHHhhhhhCHHHHHHHHHHhccCc
Confidence            77777666655544433332211110    0111110000              0 011223567789999999999999


Q ss_pred             CCCCCHHHHhcCCCC
Q 047395          410 SSRLTAHDALKHPFF  424 (432)
Q Consensus       410 ~~R~ta~elL~hp~f  424 (432)
                      .+||++.++++||||
T Consensus       269 ~~Rp~~~~ll~~~~~  283 (283)
T cd05118         269 HKRITAEQALAHPYF  283 (283)
T ss_pred             ccCcCHHHHhhCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-42  Score=317.88  Aligned_cols=253  Identities=29%  Similarity=0.458  Sum_probs=203.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .++|++.+.||.|+||.||+|.+..+++.+|+|++.... .....+.+|+.++..++|     +|++++++.+...+.+|
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h-----~~i~~~~~~~~~~~~~~   76 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRH-----PNIVAYFGSYLRRDKLW   76 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCC-----CChhceEEEEEeCCEEE
Confidence            367999999999999999999999999999999987432 244678889999998877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      ++|||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+||+++.+                  
T Consensus        77 l~~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~------------------  137 (262)
T cd06613          77 IVMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTED------------------  137 (262)
T ss_pred             EEEeCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCC------------------
Confidence            999999 889999988753 369999999999999999999999999999999999997554                  


Q ss_pred             cccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCC---CCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                               +.++|+|||.+.....   ......++..|+|||.+.+.   .++.++|||||||++|+|++|..||...+
T Consensus       138 ---------~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~  208 (262)
T cd06613         138 ---------GDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH  208 (262)
T ss_pred             ---------CCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence                     4566666666544322   12335688899999999877   78899999999999999999999998766


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .......+.......+.                                            .......+..+.+||.+||
T Consensus       209 ~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~li~~~l  244 (262)
T cd06613         209 PMRALFLISKSNFPPPK--------------------------------------------LKDKEKWSPVFHDFIKKCL  244 (262)
T ss_pred             HHHHHHHHHhccCCCcc--------------------------------------------ccchhhhhHHHHHHHHHHc
Confidence            54433322111000000                                            0001123456889999999


Q ss_pred             ccCCCCCCCHHHHhcCCC
Q 047395          406 RYDPSSRLTAHDALKHPF  423 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~  423 (432)
                      ..||.+|||+.+++.|+|
T Consensus       245 ~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         245 TKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             CCChhhCCCHHHHhcCCC
Confidence            999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=4.3e-42  Score=324.16  Aligned_cols=283  Identities=31%  Similarity=0.503  Sum_probs=213.7

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      |+...++|++.+.||+|+||.||+|.+..+++.||+|+++...   .....+.+|+.++..++|     +|++++++++.
T Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h-----~~i~~~~~~~~   76 (302)
T cd07864           2 GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNH-----RNIVNLKEIVT   76 (302)
T ss_pred             chhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCC-----CCeeeeeheec
Confidence            3455678999999999999999999999999999999986432   223456778998988877     99999999886


Q ss_pred             cCC----------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcc
Q 047395          167 YRN----------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYL  236 (432)
Q Consensus       167 ~~~----------~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  236 (432)
                      ...          .+|+|+||++++|.+++.... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.+   
T Consensus        77 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~---  152 (302)
T cd07864          77 DKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNK---  152 (302)
T ss_pred             CcchhhhccccCCcEEEEEcccCccHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC---
Confidence            544          899999999778988887653 468999999999999999999999999999999999996554   


Q ss_pred             ccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCC-CCCccchHHHHHHHH
Q 047395          237 KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCIL  311 (432)
Q Consensus       237 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil  311 (432)
                                              +.+||+|||.+.......    ....++..|+|||.+.+. .++.++|||||||++
T Consensus       153 ------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~  208 (302)
T cd07864         153 ------------------------GQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL  208 (302)
T ss_pred             ------------------------CcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHH
Confidence                                    455666666554332211    123457789999998754 478899999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcc
Q 047395          312 IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD  391 (432)
Q Consensus       312 ~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (432)
                      |+|++|++||...+..+.+..+.+..+..+...+...........    ....               ............
T Consensus       209 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------------~~~~~~~~~~~~  269 (302)
T cd07864         209 GELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNT----MKPK---------------KQYRRRLREEFS  269 (302)
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccc----cccc---------------cccccchhhhcC
Confidence            999999999998888888888877776655443332211110000    0000               000000111123


Q ss_pred             cchHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      .++..+.++|.+||+.||++|||+.+++.||||
T Consensus       270 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         270 FIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            456778999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=3.2e-42  Score=325.45  Aligned_cols=253  Identities=20%  Similarity=0.282  Sum_probs=192.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecC----------------CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE----------------TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSG  155 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~----------------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~  155 (432)
                      .++|++.++||+|+||.||+|.+..                ++..||+|+++..  ......+.+|+.++..+.|     
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----   78 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKD-----   78 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC-----
Confidence            4689999999999999999998542                3457999998752  3345568899999999877     


Q ss_pred             CceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCC-----------------CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 047395          156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNY-----------------RPFPVDLVREIGRQLLECVAFMHDLR  217 (432)
Q Consensus       156 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----------------~~l~~~~~~~i~~qi~~aL~~LH~~~  217 (432)
                      +||+++++++...+..|+||||+ +++|.+++.....                 ..+++..+..++.||+.||.|||++|
T Consensus        79 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  158 (304)
T cd05096          79 PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN  158 (304)
T ss_pred             CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999999999989999999999 9999999875321                 23677889999999999999999999


Q ss_pred             cEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHH
Q 047395          218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEV  292 (432)
Q Consensus       218 ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~  292 (432)
                      |+||||||+|||++.++                           .+||+|||++......     .....++..|+|||+
T Consensus       159 ivH~dlkp~Nill~~~~---------------------------~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~  211 (304)
T cd05096         159 FVHRDLATRNCLVGENL---------------------------TIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWEC  211 (304)
T ss_pred             ccccCcchhheEEcCCc---------------------------cEEECCCccceecccCceeEecCcCCCCccccCHHH
Confidence            99999999999976544                           4555666655432211     112345778999999


Q ss_pred             HhCCCCCccchHHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCH
Q 047395          293 ILGLGWSYPCDMWSVGCILIELCS--GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSR  370 (432)
Q Consensus       293 ~~~~~~~~~sDiwSlGvil~ellt--g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (432)
                      +.+..++.++|||||||++|||++  +..||...+..+....+.........                            
T Consensus       212 ~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------------------------  263 (304)
T cd05096         212 ILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGR----------------------------  263 (304)
T ss_pred             HhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccc----------------------------
Confidence            998889999999999999999986  66788776655444333221110000                            


Q ss_pred             HHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHh
Q 047395          371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL  419 (432)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL  419 (432)
                                   .........++..+.+||.+||+.||++|||+.|+.
T Consensus       264 -------------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         264 -------------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             -------------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence                         000001124556689999999999999999999995

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=2.1e-42  Score=322.98  Aligned_cols=237  Identities=13%  Similarity=0.129  Sum_probs=191.0

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhhh----hHhHHHHHHHHHHHHhcCCCCCceeEeeccccc----CCeEE
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY----REAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY----RNHIC  172 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~----~~~~~  172 (432)
                      ..||+|++|.||+|..  +|+.||||.++.....    .+.+.+|+.++..++|     +||+++++++.+    ...++
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~nIv~~~g~~~~~~~~~~~~~   98 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDS-----NNILKIYGFIIDIVDDLPRLS   98 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCC-----CCEEEEeeeEEecccCCCceE
Confidence            5789999999999986  5899999998754322    3566799999999987     999999998865    45789


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +||||+ +|+|.+++....  .+++.....++.|++.||.|||+ .+++||||||+|||++.                  
T Consensus        99 lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~------------------  158 (283)
T PHA02988         99 LILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE------------------  158 (283)
T ss_pred             EEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECC------------------
Confidence            999999 999999998754  68999999999999999999998 59999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC--CCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                               ++.+||+|||++...........||..|+|||++.+  ..++.++|||||||++|||++|..||.+.+..+
T Consensus       159 ---------~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~  229 (283)
T PHA02988        159 ---------NYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE  229 (283)
T ss_pred             ---------CCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH
Confidence                     455677777766654433344578899999999976  678999999999999999999999998776555


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+......++                                               .+..++..+.+||.+||+.|
T Consensus       230 ~~~~i~~~~~~~~-----------------------------------------------~~~~~~~~l~~li~~cl~~d  262 (283)
T PHA02988        230 IYDLIINKNNSLK-----------------------------------------------LPLDCPLEIKCIVEACTSHD  262 (283)
T ss_pred             HHHHHHhcCCCCC-----------------------------------------------CCCcCcHHHHHHHHHHhcCC
Confidence            4443322111110                                               01134566899999999999


Q ss_pred             CCCCCCHHHHhc
Q 047395          409 PSSRLTAHDALK  420 (432)
Q Consensus       409 P~~R~ta~elL~  420 (432)
                      |++|||++|+++
T Consensus       263 p~~Rps~~ell~  274 (283)
T PHA02988        263 SIKRPNIKEILY  274 (283)
T ss_pred             cccCcCHHHHHH
Confidence            999999999985

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=5.2e-42  Score=327.96  Aligned_cols=281  Identities=28%  Similarity=0.488  Sum_probs=213.7

Q ss_pred             ceEEEeeeecccceEEEEEEecCC--CcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc----
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRET--GETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD----  166 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~--~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~----  166 (432)
                      +|++.+.||+|+||.||+|++..+  +..||+|.+...   ......+.+|+.++..+.+    |+||+++++...    
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~----h~~iv~~~~~~~~~~~   76 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRG----HKNITCLYDMDIVFPG   76 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcC----CCChheeeeeeeeccc
Confidence            589999999999999999999888  899999998632   2234567789988888752    399999988643    


Q ss_pred             cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          167 YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       167 ~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ....+|+++|+++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.           
T Consensus        77 ~~~~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~-----------  143 (332)
T cd07857          77 NFNELYLYEELMEADLHQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCE-----------  143 (332)
T ss_pred             cCCcEEEEEecccCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCC-----------
Confidence            235689999999889999997654  6999999999999999999999999999999999999766554           


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccC-------CccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-------EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~  318 (432)
                                      ++|+|||.+.....       ......||..|+|||++.+ ..++.++|||||||++|+|++|.
T Consensus       144 ----------------~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~  207 (332)
T cd07857         144 ----------------LKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRK  207 (332)
T ss_pred             ----------------EEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                            45555554432211       1123468999999998876 46889999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      +||...+....+..+...++.++......................+.                 . .........+..+.
T Consensus       208 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~-~~~~~~~~~~~~~~  269 (332)
T cd07857         208 PVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPK-----------------K-PFESIFPNANPLAL  269 (332)
T ss_pred             cCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCC-----------------c-chHhhCCCCCHHHH
Confidence            99999888888899999988887766554433211111000000000                 0 00011233467799


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +||.+||+.||++|||+.|++.||||.+.
T Consensus       270 ~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         270 DLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             HHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence            99999999999999999999999999643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=8.9e-43  Score=327.17  Aligned_cols=254  Identities=27%  Similarity=0.447  Sum_probs=202.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .+.|.....||.|+||.||++.+..++..||||.+... ....+.+.+|+.++..+.|     +|++++++.+...+..|
T Consensus        21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h-----~~ii~~~~~~~~~~~~~   95 (292)
T cd06658          21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHH-----ENVVDMYNSYLVGDELW   95 (292)
T ss_pred             HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCC-----CcHHHHHHheecCCeEE
Confidence            45566678899999999999999999999999998642 3345567889988888876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++...   .+++..+..++.||+.||.|||++||+||||||+||+++.++                 
T Consensus        96 lv~e~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~-----------------  155 (292)
T cd06658          96 VVMEFLEGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG-----------------  155 (292)
T ss_pred             EEEeCCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC-----------------
Confidence            999999 88999988653   489999999999999999999999999999999999976544                 


Q ss_pred             cccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                .++|+|||++.....   ......|+..|+|||.+.+..++.++|||||||++|||++|..||...+...
T Consensus       156 ----------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~  225 (292)
T cd06658         156 ----------RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ  225 (292)
T ss_pred             ----------CEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                      456666665543211   1123468899999999998889999999999999999999999998765544


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+........                                              ......+..+.++|.+||..|
T Consensus       226 ~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~~  259 (292)
T cd06658         226 AMRRIRDNLPPRV----------------------------------------------KDSHKVSSVLRGFLDLMLVRE  259 (292)
T ss_pred             HHHHHHhcCCCcc----------------------------------------------ccccccCHHHHHHHHHHccCC
Confidence            3333222111000                                              001134556889999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCc
Q 047395          409 PSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~  428 (432)
                      |.+|||++|+++||||....
T Consensus       260 P~~Rpt~~~il~~~~~~~~~  279 (292)
T cd06658         260 PSQRATAQELLQHPFLKLAG  279 (292)
T ss_pred             hhHCcCHHHHhhChhhhccC
Confidence            99999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=4e-43  Score=333.02  Aligned_cols=252  Identities=21%  Similarity=0.287  Sum_probs=199.8

Q ss_pred             ecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec---hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc
Q 047395           88 ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW  164 (432)
Q Consensus        88 ~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~  164 (432)
                      ...+...+...+...||+|.||+||+|++..   .||||+++-   .....+.|.+|+.++++-+|     .||+-+.++
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH-----~NIlLFMG~  456 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRH-----ENILLFMGA  456 (678)
T ss_pred             cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcch-----hhheeeehh
Confidence            4455666788899999999999999999864   499999973   34567889999999999998     999999999


Q ss_pred             cccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          165 FDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       165 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                      +..... .||+.+| |.+|+.+|+... ..|.....+.|++||++|+.|||.++|||||||..||++.+           
T Consensus       457 ~~~p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~-----------  523 (678)
T KOG0193|consen  457 CMNPPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHE-----------  523 (678)
T ss_pred             hcCCce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEcc-----------
Confidence            998877 8999999 889999998765 57999999999999999999999999999999999999654           


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCC---CCCccchHHHHHHHHHHHH
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlGvil~ell  315 (432)
                                      ++.|||+|||++.....     ......|...|||||++...   +|++.+|||||||++|||+
T Consensus       524 ----------------~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELl  587 (678)
T KOG0193|consen  524 ----------------DLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELL  587 (678)
T ss_pred             ----------------CCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHH
Confidence                            45666667766544221     22334578889999999743   6899999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchH
Q 047395          316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG  395 (432)
Q Consensus       316 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (432)
                      ||..||...+....+-++-+....+.                                            .......++.
T Consensus       588 tg~lPysi~~~dqIifmVGrG~l~pd--------------------------------------------~s~~~s~~pk  623 (678)
T KOG0193|consen  588 TGELPYSIQNRDQIIFMVGRGYLMPD--------------------------------------------LSKIRSNCPK  623 (678)
T ss_pred             hCcCCcCCCChhheEEEecccccCcc--------------------------------------------chhhhccCHH
Confidence            99999984433332222211111000                                            0111234566


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q 047395          396 YLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       396 ~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      ++.+|+..||.+++++||...+||.
T Consensus       624 ~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  624 AMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHHHHHHHhcCcccCccHHHHHH
Confidence            7899999999999999999998886

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=4.4e-42  Score=318.14  Aligned_cols=249  Identities=28%  Similarity=0.453  Sum_probs=194.8

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech------hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI------KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-  167 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-  167 (432)
                      .+|++.+.||+|+||.||+|.+..++..||+|+++..      ......+.+|+.++..++|     +||+++++++.. 
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~   76 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQH-----ERIVQYYGCLRDR   76 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCC-----CCeeeEEEEEEcC
Confidence            3689999999999999999999999999999988632      1233567789999998877     999999998764 


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          168 -RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       168 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                       ...+++++||+ +++|.+++....  .+++..++.++.||+.||+|||+++|+||||||+||+++.++           
T Consensus        77 ~~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~-----------  143 (266)
T cd06651          77 AEKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG-----------  143 (266)
T ss_pred             CCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC-----------
Confidence             46789999999 889999998754  589999999999999999999999999999999999975544           


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC------CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ------EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                      .++|+|||++.....      ......++..|+|||.+.+..++.++|||||||++|+|++|+.
T Consensus       144 ----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~  207 (266)
T cd06651         144 ----------------NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKP  207 (266)
T ss_pred             ----------------CEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCC
Confidence                            455666665543211      1122457889999999998889999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||...........+... ...|                                              ......++.+.+
T Consensus       208 pf~~~~~~~~~~~~~~~-~~~~----------------------------------------------~~~~~~~~~~~~  240 (266)
T cd06651         208 PWAEYEAMAAIFKIATQ-PTNP----------------------------------------------QLPSHISEHARD  240 (266)
T ss_pred             CccccchHHHHHHHhcC-CCCC----------------------------------------------CCchhcCHHHHH
Confidence            99765433322211100 0000                                              001123455778


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~  425 (432)
                      +| +||..+|++|||++|+++||||+
T Consensus       241 li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         241 FL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HH-HHhcCChhhCcCHHHHhcCcccc
Confidence            88 67778999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.9e-42  Score=335.68  Aligned_cols=248  Identities=21%  Similarity=0.318  Sum_probs=191.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCC-----CcEEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeeccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRET-----GETVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~-----~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~  165 (432)
                      .++|++.+.||+|+||.||+|++..+     +..||||+++..  ....+.+.+|+.+++.+ .|     +||+++++++
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h-----~nIv~~~~~~  111 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQH-----KNIVNLLGAC  111 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccC-----CceeeEeeEe
Confidence            35799999999999999999986543     357999998642  23345678899999988 55     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC------------------------------------------------------
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNN------------------------------------------------------  190 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~------------------------------------------------------  190 (432)
                      ...+.+|+||||+ +|+|.+++....                                                      
T Consensus       112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (374)
T cd05106         112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS  191 (374)
T ss_pred             cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence            9999999999999 999999986532                                                      


Q ss_pred             --------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccccc
Q 047395          191 --------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR  256 (432)
Q Consensus       191 --------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  256 (432)
                                    ..++++..++.++.||+.||.|||++||+||||||+|||++.++                      
T Consensus       192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~----------------------  249 (374)
T cd05106         192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR----------------------  249 (374)
T ss_pred             cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCC----------------------
Confidence                          12478889999999999999999999999999999999976544                      


Q ss_pred             CCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 047395          257 LPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHL  330 (432)
Q Consensus       257 ~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~  330 (432)
                           .++|+|||++.......     ....++..|+|||++.+..++.++|||||||++|+|++ |+.||.........
T Consensus       250 -----~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~  324 (374)
T cd05106         250 -----VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKF  324 (374)
T ss_pred             -----eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHH
Confidence                 45666666654322211     11234567999999998899999999999999999997 99999765432222


Q ss_pred             HHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCC
Q 047395          331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPS  410 (432)
Q Consensus       331 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  410 (432)
                      ..+.......                                               ......+.++.++|.+||+.||+
T Consensus       325 ~~~~~~~~~~-----------------------------------------------~~~~~~~~~l~~li~~cl~~dp~  357 (374)
T cd05106         325 YKMVKRGYQM-----------------------------------------------SRPDFAPPEIYSIMKMCWNLEPT  357 (374)
T ss_pred             HHHHHcccCc-----------------------------------------------cCCCCCCHHHHHHHHHHcCCChh
Confidence            1111110000                                               00122456688999999999999


Q ss_pred             CCCCHHHHhc
Q 047395          411 SRLTAHDALK  420 (432)
Q Consensus       411 ~R~ta~elL~  420 (432)
                      +|||+.++++
T Consensus       358 ~RPs~~~l~~  367 (374)
T cd05106         358 ERPTFSQISQ  367 (374)
T ss_pred             hCcCHHHHHH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-43  Score=334.80  Aligned_cols=246  Identities=27%  Similarity=0.444  Sum_probs=205.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +.+.|.+...+|.|+|+.|-.+.+..+++..++|++.+.   .....+|+.++.....    |+||+++.+.+.++.++|
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~----h~niv~~~~v~~~~~~~~  392 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRD----HPNIVKSHDVYEDGKEIY  392 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhcC----CCcceeecceecCCceee
Confidence            467899999999999999999999999999999999754   2334456666665543    599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +|||.+ |+-|.+.+....   .....+..|+.+|+.|+.|||++|||||||||+|||+.                    
T Consensus       393 ~v~e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--------------------  449 (612)
T KOG0603|consen  393 LVMELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--------------------  449 (612)
T ss_pred             eeehhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--------------------
Confidence            999999 887777777654   33378888999999999999999999999999999962                    


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA  331 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~  331 (432)
                            +..++++|+|||.++.......+.+-|..|.|||++....|+.++||||||++||+||+|+.||........  
T Consensus       450 ------~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~e--  521 (612)
T KOG0603|consen  450 ------GSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIE--  521 (612)
T ss_pred             ------CCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHH--
Confidence                  356789999999988777765566779999999999999999999999999999999999999987665511  


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                       +....+..+                                               ....+|+.++|||++||++||.+
T Consensus       522 -i~~~i~~~~-----------------------------------------------~s~~vS~~AKdLl~~LL~~dP~~  553 (612)
T KOG0603|consen  522 -IHTRIQMPK-----------------------------------------------FSECVSDEAKDLLQQLLQVDPAL  553 (612)
T ss_pred             -HHHhhcCCc-----------------------------------------------cccccCHHHHHHHHHhccCChhh
Confidence             111111111                                               11467888999999999999999


Q ss_pred             CCCHHHHhcCCCC
Q 047395          412 RLTAHDALKHPFF  424 (432)
Q Consensus       412 R~ta~elL~hp~f  424 (432)
                      |+++.+++.||||
T Consensus       554 Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  554 RLGADEIGAHPWF  566 (612)
T ss_pred             CcChhhhccCcch
Confidence            9999999999999

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=7.9e-42  Score=316.26  Aligned_cols=249  Identities=27%  Similarity=0.450  Sum_probs=195.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech------hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI------KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-  167 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-  167 (432)
                      .+|++.+.||+|+||.||+|.+..+++.||||.+...      ......+.+|+.+++.+.|     +||+++++++.. 
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~   76 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH-----ERIVQYYGCLRDP   76 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCC-----CCeeeEEeEeccC
Confidence            4699999999999999999999999999999988532      1234567789999999877     999999998765 


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          168 -RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       168 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                       ...+++||||+ +++|.+++....  .+++..+..++.|++.||.|||++||+|+||||+||+++.++.          
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~----------  144 (265)
T cd06652          77 MERTLSIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGN----------  144 (265)
T ss_pred             CCceEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCC----------
Confidence             35788999999 899999998754  5899999999999999999999999999999999999765554          


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCccccc------CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEH------QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                       ++|+|||.+....      .......|+..|+|||++.+..++.++|||||||++|+|++|+.
T Consensus       145 -----------------~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~  207 (265)
T cd06652         145 -----------------VKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKP  207 (265)
T ss_pred             -----------------EEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCC
Confidence                             4555555443221      11223458889999999998889999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||...........+   ......                                            ...+...+..+.+
T Consensus       208 p~~~~~~~~~~~~~---~~~~~~--------------------------------------------~~~~~~~~~~~~~  240 (265)
T cd06652         208 PWAEFEAMAAIFKI---ATQPTN--------------------------------------------PVLPPHVSDHCRD  240 (265)
T ss_pred             CCCccchHHHHHHH---hcCCCC--------------------------------------------CCCchhhCHHHHH
Confidence            99765433322211   110000                                            0011234556789


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~  425 (432)
                      +|.+||. +|++||+++|+++|||+.
T Consensus       241 ~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         241 FLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            9999995 999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=5.4e-42  Score=320.78  Aligned_cols=276  Identities=31%  Similarity=0.513  Sum_probs=211.9

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC--CeE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR--NHI  171 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~--~~~  171 (432)
                      |++.+.||.|+||.||+|.+..+++.+|+|.+...   ......+.+|+.+++.+.|     +|++++++++...  +..
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~~   75 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRH-----PNIVRLKEIVTSKGKGSI   75 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccC-----CCeeeheeeEecCCCCcE
Confidence            68899999999999999999999999999999754   2334567789999999877     9999999999877  899


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      ++||||++++|.+++.... ..+++..++.++.||+.||+|||+.|++|+||||+||+++++                  
T Consensus        76 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~------------------  136 (287)
T cd07840          76 YMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINND------------------  136 (287)
T ss_pred             EEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCC------------------
Confidence            9999999779999987653 369999999999999999999999999999999999997654                  


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                               +.++|+|||.+......    .....++..|+|||.+.+. .++.++|||||||++|+|++|+.||...+.
T Consensus       137 ---------~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~  207 (287)
T cd07840         137 ---------GVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE  207 (287)
T ss_pred             ---------CCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence                     45566666655443322    2234567889999987653 578999999999999999999999998887


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhccc-chHHHHHHHHHcc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH-SAGYLIDLLQGLL  405 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~L  405 (432)
                      ......+.+..+.++...+........  ...                 ................. ++..+.++|.+||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  268 (287)
T cd07840         208 LEQLEKIFELCGSPTDENWPGVSKLPW--FEN-----------------LKPKKPYKRRLREFFKHLIDPSALDLLDKLL  268 (287)
T ss_pred             HHHHHHHHHHhCCCchhhccccccchh--hhh-----------------ccccccchhHHHHHhcccCCHHHHHHHHHHc
Confidence            777777777666555433322211100  000                 00000000111111122 4778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f  424 (432)
                      ..||.+|||+.++++||||
T Consensus       269 ~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         269 TLDPKKRISADQALQHEYF  287 (287)
T ss_pred             CCChhhCcCHHHHhhCcCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-44  Score=335.41  Aligned_cols=258  Identities=25%  Similarity=0.398  Sum_probs=221.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ..+++++..||-||||.|=++........+|+|++++.    .+..+.+..|-+++.....     +.||+++..|.+.+
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s-----~fIvrLYrTfrd~k  493 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRS-----DFIVRLYRTFRDSK  493 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCc-----hHHHHHHHHhccch
Confidence            35688889999999999999987766666999999753    3556778889999988876     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ++|++||-| ||.|+..|+..+  .|++..++.++..+++|++|||++|||.|||||+|.|+                  
T Consensus       494 yvYmLmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL------------------  553 (732)
T KOG0614|consen  494 YVYMLMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL------------------  553 (732)
T ss_pred             hhhhhHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee------------------
Confidence            999999999 999999999876  69999999999999999999999999999999999995                  


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                               +.++-+||.|||+|+.....  ..++||||.|.|||++.++..+.++|.||||+++|||++|.+||.+.+.
T Consensus       554 ---------d~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp  624 (732)
T KOG0614|consen  554 ---------DNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP  624 (732)
T ss_pred             ---------ccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence                     45566777888888765543  4558999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      +..+..|.+....+                     .|                          +..++..+.+||+++..
T Consensus       625 mktYn~ILkGid~i---------------------~~--------------------------Pr~I~k~a~~Lik~LCr  657 (732)
T KOG0614|consen  625 MKTYNLILKGIDKI---------------------EF--------------------------PRRITKTATDLIKKLCR  657 (732)
T ss_pred             HHHHHHHHhhhhhh---------------------hc--------------------------ccccchhHHHHHHHHHh
Confidence            98888876654311                     11                          12344557799999999


Q ss_pred             cCCCCCCC-----HHHHhcCCCCCCCccCCC
Q 047395          407 YDPSSRLT-----AHDALKHPFFTRDYYRRF  432 (432)
Q Consensus       407 ~dP~~R~t-----a~elL~hp~f~~~~~~~~  432 (432)
                      .+|.+|+.     +.+|.+|.||.+-.|+.|
T Consensus       658 ~~P~ERLG~~~~gI~DIkkH~Wf~gfdwegl  688 (732)
T KOG0614|consen  658 DNPTERLGYQKGGINDIKKHRWFEGFDWEGL  688 (732)
T ss_pred             cCcHhhhccccCChHHHHhhhhhhcCChhhh
Confidence            99999995     999999999999888654

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=3.4e-42  Score=318.96  Aligned_cols=246  Identities=22%  Similarity=0.270  Sum_probs=193.4

Q ss_pred             cCceEEEeeeecccceEEEEEEec---CCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR---ETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~---~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|++.+.||+|+||.||+|.+.   ..+..||+|.++..  ......+.+|+..+..++|     +||+++++++..+
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~   78 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDH-----SNIVRLEGVITRG   78 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCC-----CCcCeEEEEEecC
Confidence            357999999999999999999765   34678999998753  2334567789988888766     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +..++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++++        
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~--------  149 (266)
T cd05064          79 NTMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKIS--------  149 (266)
T ss_pred             CCcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEEC--------
Confidence            9999999999 889999998753 368999999999999999999999999999999999997665555554        


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQ  322 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~  322 (432)
                                         |||.+......    .....++..|+|||++.+..++.++|||||||++||+++ |..||.
T Consensus       150 -------------------dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~  210 (266)
T cd05064         150 -------------------GFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYW  210 (266)
T ss_pred             -------------------CCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcC
Confidence                               44443321111    011234678999999999899999999999999999775 999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ..+..+....+......                                                ..+..++..+.+++.
T Consensus       211 ~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~li~  242 (266)
T cd05064         211 DMSGQDVIKAVEDGFRL------------------------------------------------PAPRNCPNLLHQLML  242 (266)
T ss_pred             cCCHHHHHHHHHCCCCC------------------------------------------------CCCCCCCHHHHHHHH
Confidence            77665544433221110                                                001234556889999


Q ss_pred             HccccCCCCCCCHHHHhc
Q 047395          403 GLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~  420 (432)
                      +||+.+|.+|||++++++
T Consensus       243 ~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         243 DCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHcCCCchhCCCHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=4.9e-42  Score=317.98  Aligned_cols=249  Identities=24%  Similarity=0.407  Sum_probs=193.8

Q ss_pred             CceEEEeee--ecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKI--GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~l--g~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++.+.+  |.|+||.||++++..+++.+|+|++.......    .|+.....+.    .|+|++++++.+...+.+|
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~e~~~~~~~~----~h~~iv~~~~~~~~~~~~~   85 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----IEPMVHQLMK----DNPNFIKLYYSVTTLKGHV   85 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----hhHHHHHHhh----cCCCEEEEEEEEecCCeeE
Confidence            467777666  99999999999999999999999986532111    1333332222    3599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++....  .+++..++.++.||+.||.|||+.||+||||||+||++..++                 
T Consensus        86 iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-----------------  146 (267)
T PHA03390         86 LIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK-----------------  146 (267)
T ss_pred             EEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC-----------------
Confidence            999999 999999998764  699999999999999999999999999999999999975432                 


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH-H
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH-L  330 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~-~  330 (432)
                               ..++|+|||.+...... ....++..|+|||++.+..++.++|||||||++|+|++|..||........ .
T Consensus       147 ---------~~~~l~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~  216 (267)
T PHA03390        147 ---------DRIYLCDYGLCKIIGTP-SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL  216 (267)
T ss_pred             ---------CeEEEecCccceecCCC-ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH
Confidence                     26788888876654332 234688999999999998899999999999999999999999975443221 1


Q ss_pred             HHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCC
Q 047395          331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPS  410 (432)
Q Consensus       331 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  410 (432)
                      ..+......                                              .....+..+..+.+||.+||+.||.
T Consensus       217 ~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~  250 (267)
T PHA03390        217 ESLLKRQQK----------------------------------------------KLPFIKNVSKNANDFVQSMLKYNIN  250 (267)
T ss_pred             HHHHHhhcc----------------------------------------------cCCcccccCHHHHHHHHHHhccChh
Confidence            111000000                                              0001124566789999999999999


Q ss_pred             CCCC-HHHHhcCCCCCC
Q 047395          411 SRLT-AHDALKHPFFTR  426 (432)
Q Consensus       411 ~R~t-a~elL~hp~f~~  426 (432)
                      +|++ ++|+|+||||++
T Consensus       251 ~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        251 YRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             hCCchHHHHhcCCcccC
Confidence            9996 599999999974

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=5.4e-42  Score=318.57  Aligned_cols=252  Identities=28%  Similarity=0.442  Sum_probs=197.4

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-----------hhhHhHHHHHHHHHHHHhcCCCCCceeEeecc
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-----------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNW  164 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~  164 (432)
                      +|.+.+.||.|+||.||+|.+..+++.||+|.++...           ...+.+..|+.++..+.|     +|+++++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~   76 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH-----LNIVQYLGF   76 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC-----CCcceEEEE
Confidence            5889999999999999999999899999999885311           112456778888888876     999999999


Q ss_pred             cccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          165 FDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       165 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                      +...+..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++|++||||||+||+++.+          
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~----------  144 (272)
T cd06629          77 ETTEEYLSIFLEYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDAD----------  144 (272)
T ss_pred             eccCCceEEEEecCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCC----------
Confidence            99999999999999 999999998764  68999999999999999999999999999999999996554          


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCC--CCccchHHHHHHHHHHHHh
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLG--WSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGvil~ellt  316 (432)
                                       +.++|+|||++......     .....|+..|+|||++....  ++.++|+||||+++|+|++
T Consensus       145 -----------------~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~  207 (272)
T cd06629         145 -----------------GICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFA  207 (272)
T ss_pred             -----------------CeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHh
Confidence                             45666666655432211     12345788999999998754  7899999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       317 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      |..||...........+.....                     ...++                      ......++..
T Consensus       208 g~~p~~~~~~~~~~~~~~~~~~---------------------~~~~~----------------------~~~~~~~~~~  244 (272)
T cd06629         208 GRRPWSDEEAIAAMFKLGNKRS---------------------APPIP----------------------PDVSMNLSPV  244 (272)
T ss_pred             CCCCCcCcchHHHHHHhhcccc---------------------CCcCC----------------------ccccccCCHH
Confidence            9999975443322211100000                     00000                      0011235667


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      +.++|.+||..+|++|||++++|+||||
T Consensus       245 ~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         245 ALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            8999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=3.6e-42  Score=317.96  Aligned_cols=247  Identities=28%  Similarity=0.432  Sum_probs=199.7

Q ss_pred             eecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          103 IGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       103 lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      ||.|+||.||+|++..+++.||+|++....    .....+.+|+.+++.+.|     +||+++++.+..++..|+||||+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~lv~e~~   75 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH-----PFIVKLYRTFKDKKYIYMLMEYC   75 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCC-----CCEeeeeeeEEcCCccEEEEecC
Confidence            699999999999999999999999986432    334568889998888877     99999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccC
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL  257 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  257 (432)
                       +++|.+++.+..  .+++..+..++.||+.||.|||++|++|+||||+||+++.                         
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~-------------------------  128 (262)
T cd05572          76 LGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDS-------------------------  128 (262)
T ss_pred             CCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcC-------------------------
Confidence             999999998754  5899999999999999999999999999999999999654                         


Q ss_pred             CCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHH
Q 047395          258 PKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE--NLEHLAMM  333 (432)
Q Consensus       258 ~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~--~~~~~~~i  333 (432)
                        ++.++|+|||.+......  .....++..|+|||.+.+..++.++|+||||+++|+|++|..||....  .......+
T Consensus       129 --~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  206 (262)
T cd05572         129 --NGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDI  206 (262)
T ss_pred             --CCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHH
Confidence              456777777776554332  223467889999999988889999999999999999999999998665  22222221


Q ss_pred             HHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCC
Q 047395          334 ERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRL  413 (432)
Q Consensus       334 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~  413 (432)
                      .....                     ...                          .+...++.+.++|.+||+.||++||
T Consensus       207 ~~~~~---------------------~~~--------------------------~~~~~~~~~~~~i~~~l~~~p~~R~  239 (262)
T cd05572         207 LKGNG---------------------KLE--------------------------FPNYIDKAAKDLIKQLLRRNPEERL  239 (262)
T ss_pred             hccCC---------------------CCC--------------------------CCcccCHHHHHHHHHHccCChhhCc
Confidence            11000                     000                          1112355688999999999999999


Q ss_pred             C-----HHHHhcCCCCCCCccC
Q 047395          414 T-----AHDALKHPFFTRDYYR  430 (432)
Q Consensus       414 t-----a~elL~hp~f~~~~~~  430 (432)
                      |     ++|+++||||++..++
T Consensus       240 ~~~~~~~~~l~~~~~~~~~~~~  261 (262)
T cd05572         240 GNLKGGIKDIKKHKWFNGFDWE  261 (262)
T ss_pred             CCcccCHHHHhcChhhhCCCCC
Confidence            9     9999999999975543

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=7.3e-42  Score=318.74  Aligned_cols=271  Identities=23%  Similarity=0.361  Sum_probs=208.7

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||.|+||.||+|.+..+++.||+|++...    ......+..|..++..+.    .|+||+++++++...+.
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~----~~~~i~~~~~~~~~~~~   76 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN----GHPGIIKLYYTFQDEEN   76 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc----cCCCchhHHHHhcCCce
Confidence            4799999999999999999999999999999998652    223356777888888776    23999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .++|||++ +++|.+++.+..  .+++..+..++.|++.||.|||++|++|+||||+||++..++.+++.|||++.....
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581          77 LYFVLEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             EEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence            99999999 999999998764  699999999999999999999999999999999999998877777777777654322


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                      .........    ....++..............++..|+|||++.+..++.++|||||||+++++++|..||...+....
T Consensus       155 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  230 (280)
T cd05581         155 NSSPESNKG----DATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT  230 (280)
T ss_pred             ccccccCCC----CCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence            111000000    0001111111111222345678999999999988889999999999999999999999987664443


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+.......                                                 +..++..+.+||.+||+.||
T Consensus       231 ~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~li~~~l~~~p  261 (280)
T cd05581         231 FQKILKLEYSF-------------------------------------------------PPNFPPDAKDLIEKLLVLDP  261 (280)
T ss_pred             HHHHHhcCCCC-------------------------------------------------CCccCHHHHHHHHHHhcCCH
Confidence            33322111111                                                 12335568899999999999


Q ss_pred             CCCCCH----HHHhcCCCC
Q 047395          410 SSRLTA----HDALKHPFF  424 (432)
Q Consensus       410 ~~R~ta----~elL~hp~f  424 (432)
                      ++|||+    +++++||||
T Consensus       262 ~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         262 QDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             hhCCCcccCHHHHhcCCCC
Confidence            999999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=6.2e-42  Score=315.07  Aligned_cols=246  Identities=27%  Similarity=0.415  Sum_probs=199.3

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeec--hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      +|++.+.||.|+||.||++.+..+++.||+|.++.  .....+.+..|+.++..++|     +|++++++.+..++.+|+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~l   75 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKH-----PNIVAFKESFEADGHLYI   75 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCC-----CCcceEEEEEEECCEEEE
Confidence            58999999999999999999999999999999863  23345667788888888876     999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.+                   
T Consensus        76 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~-------------------  136 (255)
T cd08219          76 VMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQN-------------------  136 (255)
T ss_pred             EEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCC-------------------
Confidence            99999 8999999987554568999999999999999999999999999999999996544                   


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                              +.++|+|||.+......   .....|++.|+|||++.+..++.++||||||+++|+|++|..||...+....
T Consensus       137 --------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~  208 (255)
T cd08219         137 --------GKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL  208 (255)
T ss_pred             --------CcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH
Confidence                    45666666665443221   2235688899999999988899999999999999999999999987554433


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+......                                                .....++..+.+||.+||+.||
T Consensus       209 ~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~li~~~l~~~P  240 (255)
T cd08219         209 ILKVCQGSYK------------------------------------------------PLPSHYSYELRSLIKQMFKRNP  240 (255)
T ss_pred             HHHHhcCCCC------------------------------------------------CCCcccCHHHHHHHHHHHhCCc
Confidence            3322111000                                                0012344558899999999999


Q ss_pred             CCCCCHHHHhcC
Q 047395          410 SSRLTAHDALKH  421 (432)
Q Consensus       410 ~~R~ta~elL~h  421 (432)
                      ++|||+.++++-
T Consensus       241 ~~Rp~~~~il~~  252 (255)
T cd08219         241 RSRPSATTILSR  252 (255)
T ss_pred             ccCCCHHHHhhc
Confidence            999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=2.7e-42  Score=321.48  Aligned_cols=252  Identities=27%  Similarity=0.425  Sum_probs=202.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ..|+..+.||.|+||.||+|.+..++..||+|+++..  ......+.+|+.++..+.|     +|++++++.+...+..|
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~   78 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-----PYVTKYYGSYLKGTKLW   78 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEEECCEEE
Confidence            4688899999999999999999999999999998743  2334567788888888876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++...   ++++..+..++.|++.||+|||+.+++|+||+|+||+++.++                 
T Consensus        79 lv~e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~-----------------  138 (277)
T cd06640          79 IIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG-----------------  138 (277)
T ss_pred             EEEecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC-----------------
Confidence            999999 89999998754   589999999999999999999999999999999999976544                 


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                .++|+|||++......   .....++..|+|||++.+..++.++|+|||||++|+|++|..||.......
T Consensus       139 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~  208 (277)
T cd06640         139 ----------DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR  208 (277)
T ss_pred             ----------CEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh
Confidence                      4566666655432221   122457888999999998889999999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+....  .                                              ......++..+.++|.+||+.|
T Consensus       209 ~~~~~~~~~--~----------------------------------------------~~~~~~~~~~~~~li~~~l~~~  240 (277)
T cd06640         209 VLFLIPKNN--P----------------------------------------------PTLTGEFSKPFKEFIDACLNKD  240 (277)
T ss_pred             HhhhhhcCC--C----------------------------------------------CCCchhhhHHHHHHHHHHcccC
Confidence            222110000  0                                              0011124556889999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCcc
Q 047395          409 PSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~~  429 (432)
                      |++||++.++++||||.+...
T Consensus       241 p~~Rp~~~~il~~~~~~~~~~  261 (277)
T cd06640         241 PSFRPTAKELLKHKFIVKNAK  261 (277)
T ss_pred             cccCcCHHHHHhChHhhhcch
Confidence            999999999999999977544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=8.1e-42  Score=319.18  Aligned_cols=277  Identities=33%  Similarity=0.576  Sum_probs=213.3

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh--hhHhHHHHHHHHHHHH-hcCCCCCceeEeecccccCCeEEE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLK-RYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~-~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      |++.+.||.|++|+||+|....+++.||||.+.....  ......+|+..+..+. |     +|++++++++..++..++
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h-----~~i~~~~~~~~~~~~~~l   75 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEH-----PNIVKLKEVFRENDELYF   75 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCC-----CCchhHHHHhhcCCcEEE
Confidence            6788999999999999999998999999999864322  2223456777777776 5     999999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          174 VFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       174 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      ||||++++|.+++.......+++..+..++.|++.||.|||++||+|+||+|+||+++.                     
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~---------------------  134 (283)
T cd07830          76 VFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG---------------------  134 (283)
T ss_pred             EEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC---------------------
Confidence            99999999999998765446899999999999999999999999999999999999654                     


Q ss_pred             cccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL  330 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~  330 (432)
                            ++.++|+|||.+......  .....++..|+|||++.+ ..++.++||||||+++|+|++|.+||...+..+..
T Consensus       135 ------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~  208 (283)
T cd07830         135 ------PEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQL  208 (283)
T ss_pred             ------CCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHH
Confidence                  556777777766544332  233467889999998854 45789999999999999999999999988888888


Q ss_pred             HHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCC
Q 047395          331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPS  410 (432)
Q Consensus       331 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  410 (432)
                      ..+...++.++...+........    .....++.....               .........+..+.+||.+||+.||+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~li~~cl~~~p~  269 (283)
T cd07830         209 YKICSVLGTPTKQDWPEGYKLAS----KLGFRFPQFAPT---------------SLHQLIPNASPEAIDLIKDMLRWDPK  269 (283)
T ss_pred             HHHHHhcCCCChhhhhhHhhhhc----cccccccccccc---------------cHHHHcccCCHHHHHHHHHhcccCcc
Confidence            88888877766543332211110    000011110000               00111123366789999999999999


Q ss_pred             CCCCHHHHhcCCCC
Q 047395          411 SRLTAHDALKHPFF  424 (432)
Q Consensus       411 ~R~ta~elL~hp~f  424 (432)
                      +|||++|++.||||
T Consensus       270 ~Rpt~~ei~~~~~~  283 (283)
T cd07830         270 KRPTASQALQHPYF  283 (283)
T ss_pred             cCCCHHHHhhCCCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-41  Score=316.95  Aligned_cols=277  Identities=33%  Similarity=0.543  Sum_probs=207.8

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe---
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH---  170 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~---  170 (432)
                      |++.+.||.|+||.||+|++..+++.||+|.++...   .....+.+|+.++..+...  .|+|++++++++.....   
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~h~~i~~~~~~~~~~~~~~~   78 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESF--EHPNIVRLLDVCHGPRTDRE   78 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhcc--CCCCcceEEEEEeeccCCCC
Confidence            688999999999999999999889999999986322   2234566788877777532  34999999999887665   


Q ss_pred             --EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          171 --ICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       171 --~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                        ++++|||+.++|.+++.......+++..++.++.||+.||.|||+.|++|+||+|+||+++.                
T Consensus        79 ~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~----------------  142 (287)
T cd07838          79 LKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS----------------  142 (287)
T ss_pred             ceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc----------------
Confidence              99999999779999998755446999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                 ++.++|+|||.+......  .....++..|+|||++.+..++.++|||||||++|+|++|.+||...+.
T Consensus       143 -----------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~  211 (287)
T cd07838         143 -----------DGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE  211 (287)
T ss_pred             -----------CCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh
Confidence                       355677777766543222  1234578899999999998899999999999999999999999998887


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+....+....+......+.......       ...++....               .......+..++.+.++|.+||+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~---------------~~~~~~~~~~~~~~~~li~~~l~  269 (287)
T cd07838         212 ADQLDKIFDVIGLPSEEEWPRNVSLP-------RSSFPSYTP---------------RSFKSFVPEICEEGLDLLKKMLT  269 (287)
T ss_pred             HHHHHHHHHHcCCCChHhcCCCcccc-------hhhcccccc---------------cchhhhhhhhhHHHHHHHHHHhc
Confidence            77776665544332211100000000       000000000               00011123456778899999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 047395          407 YDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f  424 (432)
                      .||++||++.|+++||||
T Consensus       270 ~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         270 FNPHKRISAFEALQHPYF  287 (287)
T ss_pred             cCCccCCCHHHHhcCcCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=5.5e-42  Score=324.29  Aligned_cols=257  Identities=26%  Similarity=0.405  Sum_probs=205.0

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .....+|++.+.||+|+||+||+|.+..+++.||+|++...    ......+.+|+.++..++|     +|++++++++.
T Consensus        11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-----~niv~~~~~~~   85 (307)
T cd06607          11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRH-----PNTIEYKGCYL   85 (307)
T ss_pred             CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCC-----CCEEEEEEEEE
Confidence            34457799999999999999999999999999999998632    2233467789999888877     99999999999


Q ss_pred             cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          167 YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       167 ~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ..+..|+||||+.++|.+++.... ..+++..+..++.||+.||.|||+.||+||||+|+||+++.              
T Consensus        86 ~~~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~--------------  150 (307)
T cd06607          86 REHTAWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE--------------  150 (307)
T ss_pred             eCCeEEEEHHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECC--------------
Confidence            999999999999889988887543 36899999999999999999999999999999999999654              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHh---CCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                   ++.++|+|||++...... ....++..|+|||++.   ...++.++|||||||++|+|++|..||..
T Consensus       151 -------------~~~~kL~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~  216 (307)
T cd06607         151 -------------PGTVKLADFGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  216 (307)
T ss_pred             -------------CCCEEEeecCcceecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCC
Confidence                         456777777776543322 3356788999999885   34578899999999999999999999977


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+.......+...  ..+                    ..                         ....++..+.++|.+
T Consensus       217 ~~~~~~~~~~~~~--~~~--------------------~~-------------------------~~~~~~~~~~~li~~  249 (307)
T cd06607         217 MNAMSALYHIAQN--DSP--------------------TL-------------------------SSNDWSDYFRNFVDS  249 (307)
T ss_pred             ccHHHHHHHHhcC--CCC--------------------CC-------------------------CchhhCHHHHHHHHH
Confidence            6544432222110  000                    00                         001234568899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||..||++||++.+++.||||....
T Consensus       250 ~l~~~p~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         250 CLQKIPQDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             HhcCChhhCcCHHHHhcChhhcccC
Confidence            9999999999999999999997754

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.3e-42  Score=331.64  Aligned_cols=302  Identities=17%  Similarity=0.195  Sum_probs=199.8

Q ss_pred             eeeecc--cceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395          101 RKIGEG--TFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus       101 ~~lg~G--~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      ..||.|  +||+||+|++..+|+.||+|++....   ...+.+.+|+.+++.++|     +||+++++++..++..|+||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h-----~niv~~~~~~~~~~~~~~v~   78 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRH-----PNIMTSWTVFTTGSWLWVIS   78 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC-----CCcceEeeeEecCCceEEEE
Confidence            456666  99999999999999999999986422   234567788888777776     99999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          176 EML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ||+ +++|.+++.+.....+++..+..++.||+.||+|||++||+||||||+|||+..++.+++.||+........    
T Consensus        79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~----  154 (328)
T cd08226          79 PFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRN----  154 (328)
T ss_pred             ecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhcc----
Confidence            999 889999998765456899999999999999999999999999999999999887777666666543211100    


Q ss_pred             ccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC--CCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM  332 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~  332 (432)
                                   .+.............++..|+|||++.+.  .++.++|||||||++|+|++|..||...........
T Consensus       155 -------------~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~  221 (328)
T cd08226         155 -------------GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQ  221 (328)
T ss_pred             -------------CccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHH
Confidence                         00000000011112346679999999764  478999999999999999999999987665443333


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhh-cCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL-KLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      ........|....  ...............+.... ......... ...............+++.+.+||.+||+.||++
T Consensus       222 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  298 (328)
T cd08226         222 KLKGPPYSPLDIT--TFPCEESRMKNSQSGVDSGI-GESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEK  298 (328)
T ss_pred             HhcCCCCCCcccc--ccchhhhhhccchhhhhccc-ccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCccc
Confidence            2221111111000  00000000000000000000 000000000 0000000111122356778999999999999999


Q ss_pred             CCCHHHHhcCCCCCCC
Q 047395          412 RLTAHDALKHPFFTRD  427 (432)
Q Consensus       412 R~ta~elL~hp~f~~~  427 (432)
                      |||+.|+|+||||.+.
T Consensus       299 Rpta~e~l~~~~~~~~  314 (328)
T cd08226         299 RPSASSLLSHAFFKQV  314 (328)
T ss_pred             CCCHHHHhhCHHHHHH
Confidence            9999999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=8.5e-42  Score=314.31  Aligned_cols=250  Identities=26%  Similarity=0.417  Sum_probs=203.0

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.+.||.|+||.||+|.+..++..||+|.+....   ...+.+.+|+.+++.++|     +|++++++.+......+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h-----~~i~~~~~~~~~~~~~~   75 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKH-----PNIVTFFASFQENGRLF   75 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCC-----CChhhhhheeccCCeEE
Confidence            5899999999999999999999999999999986432   334567789999988877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +|+||+ +++|.+++.......+++..+..++.||+.||.|||+.+|+|+||||+||+++.++                 
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~-----------------  138 (257)
T cd08225          76 IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNG-----------------  138 (257)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCC-----------------
Confidence            999999 99999999876545689999999999999999999999999999999999975432                 


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                               ..++|+|||.+.......   ....|++.|+|||++.+..++.++|+|||||++|+|++|..||...+...
T Consensus       139 ---------~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~  209 (257)
T cd08225         139 ---------MVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ  209 (257)
T ss_pred             ---------CeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence                     235677777665433221   22458889999999988889999999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+..  +..+                                              ...+..+..+.++|.+||..+
T Consensus       210 ~~~~~~~--~~~~----------------------------------------------~~~~~~~~~~~~~i~~~l~~~  241 (257)
T cd08225         210 LVLKICQ--GYFA----------------------------------------------PISPNFSRDLRSLISQLFKVS  241 (257)
T ss_pred             HHHHHhc--ccCC----------------------------------------------CCCCCCCHHHHHHHHHHhccC
Confidence            3222111  0000                                              001234556889999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 047395          409 PSSRLTAHDALKHPFF  424 (432)
Q Consensus       409 P~~R~ta~elL~hp~f  424 (432)
                      |++|||+.++++||||
T Consensus       242 p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         242 PRDRPSITSILKRPFL  257 (257)
T ss_pred             hhhCcCHHHHhhCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=4.7e-42  Score=321.11  Aligned_cols=264  Identities=26%  Similarity=0.387  Sum_probs=203.0

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++++.||+|+||+||+|.+..+++.||+|++...  ......+.+|++++..++|     +||+++++.+...+.++
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~~~   79 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRS-----PYIVSFYGAFLNENNIC   79 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCC-----CCcceEeeeEecCCEEE
Confidence            5799999999999999999999999999999988643  3345678889999988877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +||||+ +++|.+++...+  .+++..+..++.|++.||.|||+ ++|+||||||+||+++.                  
T Consensus        80 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~------------------  139 (284)
T cd06620          80 MCMEFMDCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS------------------  139 (284)
T ss_pred             EEEecCCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC------------------
Confidence            999999 899999987754  68999999999999999999997 69999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCccccc-CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEH-QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                               ++.++|+|||++.... .......|+..|+|||++.+..++.++|||||||++|+|++|..||........
T Consensus       140 ---------~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~  210 (284)
T cd06620         140 ---------RGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD  210 (284)
T ss_pred             ---------CCcEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh
Confidence                     4456667776654322 122335789999999999888899999999999999999999999986543211


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...       .+......    ............                         ....++..+.+||.+||+.||
T Consensus       211 ~~~-------~~~~~~~~----~~~~~~~~~~~~-------------------------~~~~~~~~~~~li~~~l~~dp  254 (284)
T cd06620         211 GQD-------DPMGILDL----LQQIVQEPPPRL-------------------------PSSDFPEDLRDFVDACLLKDP  254 (284)
T ss_pred             hhh-------hhhHHHHH----HHHHhhccCCCC-------------------------CchhcCHHHHHHHHHHhcCCc
Confidence            000       00000000    000000000000                         001245568899999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCc
Q 047395          410 SSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       410 ~~R~ta~elL~hp~f~~~~  428 (432)
                      ++|||+.|+++|+||.+..
T Consensus       255 ~~Rpt~~e~~~~~~~~~~~  273 (284)
T cd06620         255 TERPTPQQLCAMPPFIQAL  273 (284)
T ss_pred             ccCcCHHHHhcCccccccc
Confidence            9999999999999997653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=3.5e-42  Score=329.87  Aligned_cols=284  Identities=32%  Similarity=0.514  Sum_probs=215.7

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec---hhhhhHhHHHHHHHHHHH-HhcCCCCCceeEeecccc
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~~  166 (432)
                      ..+.++|++.+.||+|+||.||+|.+..+++.+|+|.+..   .......+.+|+.++..+ .|     +||+++++++.
T Consensus         3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~ni~~~~~~~~   77 (337)
T cd07852           3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDH-----PNIVKLLNVIK   77 (337)
T ss_pred             chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCC-----CCccceeeeec
Confidence            3467889999999999999999999998999999998753   223344567899999998 66     99999999875


Q ss_pred             c--CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          167 Y--RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       167 ~--~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      .  ....|+||||++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+||+++.++.         
T Consensus        78 ~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~---------  145 (337)
T cd07852          78 AENDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCR---------  145 (337)
T ss_pred             cCCCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc---------
Confidence            4  3478999999988999998764   5889999999999999999999999999999999999765554         


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccC--------CccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHH
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--------EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~ell  315 (432)
                                        ++|+|||.+.....        ......||..|+|||++.+ ..++.++|||||||++|+|+
T Consensus       146 ------------------~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~  207 (337)
T cd07852         146 ------------------VKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEML  207 (337)
T ss_pred             ------------------EEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHH
Confidence                              55555554433211        1123468899999998865 45788999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchH
Q 047395          316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG  395 (432)
Q Consensus       316 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (432)
                      +|+.||.+....+....+....+..+...+..........+.                 .......... .....+.++.
T Consensus       208 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~-~~~~~~~~~~  269 (337)
T cd07852         208 LGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATML-----------------DSLPSRPRKP-LDELLPKASD  269 (337)
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhh-----------------hhcccccccc-hhhhccCCCH
Confidence            999999988888888887777776665444333211111000                 0000000000 1112234677


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          396 YLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       396 ~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ++.+||.+||+.||++|||+.++++||||++-
T Consensus       270 ~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         270 DALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             HHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence            89999999999999999999999999999763

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=9.6e-42  Score=315.34  Aligned_cols=246  Identities=20%  Similarity=0.330  Sum_probs=198.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      ..|.+.+.||.|+||.||+|.+..+++.||+|+++........+.+|++++..+.|     +||+++++++...+.+++|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~lv   80 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQLLGVCTREPPFYII   80 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCC-----CChhheEEEEcCCCCcEEE
Confidence            46999999999999999999999999999999987655555678889999999877     9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+ +++|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++.                  
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~------------------  142 (263)
T cd05052          81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL------------------  142 (263)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCc------------------
Confidence            9999 899999998765456899999999999999999999999999999999999765544                  


Q ss_pred             cccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE  328 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~  328 (432)
                               ++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+
T Consensus       143 ---------~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~  213 (263)
T cd05052         143 ---------VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ  213 (263)
T ss_pred             ---------EEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                     5555555544322211    11223567999999998899999999999999999998 999998765544


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.....                                                ......++..+.++|.+||+.|
T Consensus       214 ~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~li~~cl~~~  245 (263)
T cd05052         214 VYELLEKGYR------------------------------------------------MERPEGCPPKVYELMRACWQWN  245 (263)
T ss_pred             HHHHHHCCCC------------------------------------------------CCCCCCCCHHHHHHHHHHccCC
Confidence            3333221100                                                0011235567899999999999


Q ss_pred             CCCCCCHHHHhc
Q 047395          409 PSSRLTAHDALK  420 (432)
Q Consensus       409 P~~R~ta~elL~  420 (432)
                      |++|||+.++++
T Consensus       246 p~~Rp~~~~l~~  257 (263)
T cd05052         246 PSDRPSFAEIHQ  257 (263)
T ss_pred             cccCCCHHHHHH
Confidence            999999999975

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=9e-44  Score=334.09  Aligned_cols=234  Identities=26%  Similarity=0.384  Sum_probs=195.7

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      -++-||+|+.|.||+|+..  ++.||||.++.      .-..+|+.|+.|+|     +||+.+.++|.....+|||||||
T Consensus       128 ELeWlGSGaQGAVF~Grl~--netVAVKKV~e------lkETdIKHLRkLkH-----~NII~FkGVCtqsPcyCIiMEfC  194 (904)
T KOG4721|consen  128 ELEWLGSGAQGAVFLGRLH--NETVAVKKVRE------LKETDIKHLRKLKH-----PNIITFKGVCTQSPCYCIIMEFC  194 (904)
T ss_pred             hhhhhccCcccceeeeecc--CceehhHHHhh------hhhhhHHHHHhccC-----cceeeEeeeecCCceeEEeeecc
Confidence            3678999999999999755  78999997643      23357888999988     99999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccC
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL  257 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  257 (432)
                       .|.|+.+|+...  +++......|..+|+.|+.|||.+.|||||||.-||||.                          
T Consensus       195 a~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs--------------------------  246 (904)
T KOG4721|consen  195 AQGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS--------------------------  246 (904)
T ss_pred             ccccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee--------------------------
Confidence             999999999865  799999999999999999999999999999999999965                          


Q ss_pred             CCCCCeEEeecCCcccccCCcc--ccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Q 047395          258 PKSSAIKVIDFGSTAYEHQEHN--YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER  335 (432)
Q Consensus       258 ~~~~~~kl~Dfg~a~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~  335 (432)
                       .+..|||+|||.++......+  .++||..|||||++.+.+.+.|+|||||||+|||||||..||...+...+   |. 
T Consensus       247 -~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---Iw-  321 (904)
T KOG4721|consen  247 -YDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---IW-  321 (904)
T ss_pred             -ccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee---EE-
Confidence             455688888888876554432  37899999999999999999999999999999999999999975443211   10 


Q ss_pred             HhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCH
Q 047395          336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTA  415 (432)
Q Consensus       336 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta  415 (432)
                      ..|.                                           ..+....+..+++.+.=||++||+-.|..||++
T Consensus       322 GVGs-------------------------------------------NsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSF  358 (904)
T KOG4721|consen  322 GVGS-------------------------------------------NSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSF  358 (904)
T ss_pred             eccC-------------------------------------------CcccccCcccCchHHHHHHHHHHhcCCCCCccH
Confidence            0010                                           011123345777889999999999999999999


Q ss_pred             HHHhcC
Q 047395          416 HDALKH  421 (432)
Q Consensus       416 ~elL~h  421 (432)
                      .++|.|
T Consensus       359 rqil~H  364 (904)
T KOG4721|consen  359 RQILLH  364 (904)
T ss_pred             HHHHHH
Confidence            999988

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=5.9e-42  Score=332.41  Aligned_cols=249  Identities=22%  Similarity=0.337  Sum_probs=192.1

Q ss_pred             cCceEEEeeeecccceEEEEEEe-----cCCCcEEEEEEeechh--hhhHhHHHHHHHHHHH-HhcCCCCCceeEeeccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLD-----RETGETVAIKVVRSIK--KYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~  165 (432)
                      .++|++.+.||+|+||.||+|.+     ..++..||||+++...  ...+.+.+|+.++..+ .|     |||+++++++
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~H-----pnIv~l~~~~  108 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH-----INIVNLLGAC  108 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCC-----cceeeeeeee
Confidence            45799999999999999999974     3456789999986432  3345678899999998 45     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC-----------------------------------------------------
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNY-----------------------------------------------------  191 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~-----------------------------------------------------  191 (432)
                      ...+..++||||+ +|+|.+++.....                                                     
T Consensus       109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  188 (375)
T cd05104         109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS  188 (375)
T ss_pred             ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence            9999999999999 9999999975321                                                     


Q ss_pred             --------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          192 --------------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       192 --------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                                          ..+++..+..++.||+.||.|||++||+||||||+|||++.++                 
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~-----------------  251 (375)
T cd05104         189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR-----------------  251 (375)
T ss_pred             cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC-----------------
Confidence                                2478888999999999999999999999999999999976544                 


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHE  325 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~  325 (432)
                                .++|+|||++.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus       252 ----------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~  321 (375)
T cd05104         252 ----------ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMP  321 (375)
T ss_pred             ----------cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence                      45666666654332211     11234567999999999999999999999999999998 899997654


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .......+......                                               ...+...+.++.+||.+||
T Consensus       322 ~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~l~~li~~cl  354 (375)
T cd05104         322 VDSKFYKMIKEGYR-----------------------------------------------MLSPECAPSEMYDIMKSCW  354 (375)
T ss_pred             chHHHHHHHHhCcc-----------------------------------------------CCCCCCCCHHHHHHHHHHc
Confidence            33222111110000                                               0001123456889999999


Q ss_pred             ccCCCCCCCHHHHhcC
Q 047395          406 RYDPSSRLTAHDALKH  421 (432)
Q Consensus       406 ~~dP~~R~ta~elL~h  421 (432)
                      +.||++|||+.|+++.
T Consensus       355 ~~dP~~RPs~~eil~~  370 (375)
T cd05104         355 DADPLKRPTFKQIVQL  370 (375)
T ss_pred             cCChhHCcCHHHHHHH
Confidence            9999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=2.7e-42  Score=319.25  Aligned_cols=255  Identities=27%  Similarity=0.457  Sum_probs=203.8

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++.+.||.|+||.||+|.+..+++.||+|.+...  ......+.+|+++++.+.|     +||+++++.+...+..+
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~~~~~~~   75 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNS-----PYIVGFYGAFYNNGDIS   75 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCC-----CchhhhheeeecCCEEE
Confidence            3588899999999999999999999999999998653  3344567889888888876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +++||+ +++|.+++.... ..+++..+..++.|++.||+|||+ .|++|+||||+||+++.                  
T Consensus        76 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~------------------  136 (265)
T cd06605          76 ICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS------------------  136 (265)
T ss_pred             EEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC------------------
Confidence            999999 799999998753 479999999999999999999999 99999999999999644                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCCc-cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc--H
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN--L  327 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~--~  327 (432)
                               ++.++|+|||.+....... ....++..|+|||.+.+..++.++|||||||++|+|++|..||.....  .
T Consensus       137 ---------~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~  207 (265)
T cd06605         137 ---------RGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD  207 (265)
T ss_pred             ---------CCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc
Confidence                     5567888888765433221 125688899999999998999999999999999999999999975421  1


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .....+.......+.                   ..                         ....++..+.++|.+||..
T Consensus       208 ~~~~~~~~~~~~~~~-------------------~~-------------------------~~~~~~~~~~~li~~~l~~  243 (265)
T cd06605         208 GIFELLQYIVNEPPP-------------------RL-------------------------PSGKFSPDFQDFVNLCLIK  243 (265)
T ss_pred             cHHHHHHHHhcCCCC-------------------CC-------------------------ChhhcCHHHHHHHHHHcCC
Confidence            111111111110000                   00                         0011566689999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~  426 (432)
                      ||++|||+.+++.||||++
T Consensus       244 ~p~~Rpt~~~ll~~~~~~~  262 (265)
T cd06605         244 DPRERPSYKELLEHPFIKK  262 (265)
T ss_pred             CchhCcCHHHHhhCchhhc
Confidence            9999999999999999965

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.3e-41  Score=313.17  Aligned_cols=248  Identities=29%  Similarity=0.482  Sum_probs=200.0

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh------hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      +|+..+.||+|+||+||+|.+..+++.|++|.+....      .....+.+|+.++..++|     +|++++++++....
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-----~~i~~~~~~~~~~~   75 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH-----PNIVQYLGTEREED   75 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCC-----CCchheeeeEecCC
Confidence            5788899999999999999998899999999986432      234567889998888877     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+++|+||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+|+||+|+||+++.+               
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~---------------  138 (258)
T cd06632          76 NLYIFLELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTN---------------  138 (258)
T ss_pred             eEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC---------------
Confidence            999999999 889999998754  58999999999999999999999999999999999996544               


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                  +.+||+|||.+......  .....|+..|+|||.+.... ++.++|+|||||++|+|++|..||....
T Consensus       139 ------------~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~  206 (258)
T cd06632         139 ------------GVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE  206 (258)
T ss_pred             ------------CCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence                        45666666665543222  23356888999999998776 8999999999999999999999997655


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .......+... ...+                                              ..+..++..+.++|.+||
T Consensus       207 ~~~~~~~~~~~-~~~~----------------------------------------------~~~~~~~~~~~~li~~~l  239 (258)
T cd06632         207 GVAAVFKIGRS-KELP----------------------------------------------PIPDHLSDEAKDFILKCL  239 (258)
T ss_pred             HHHHHHHHHhc-ccCC----------------------------------------------CcCCCcCHHHHHHHHHHh
Confidence            33322221110 0000                                              011234566889999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f  424 (432)
                      +.||++|||+.+++.|||+
T Consensus       240 ~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         240 QRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hcCcccCcCHHHHhcCCCC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=1.6e-41  Score=316.40  Aligned_cols=251  Identities=26%  Similarity=0.415  Sum_probs=191.3

Q ss_pred             eeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEcc
Q 047395          102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEM  177 (432)
Q Consensus       102 ~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  177 (432)
                      .||+|+||.||+|.+..+++.||+|++....    ........|..++..+.+  ..|++++.+++.+...+..|+||||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~v~e~   78 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMSYAFHTPDKLSFILDL   78 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh--CCCCcEeeeeeeeecCCEEEEEEec
Confidence            4899999999999999999999999986432    112234445555555543  2459999999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccccc
Q 047395          178 L-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR  256 (432)
Q Consensus       178 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  256 (432)
                      + |++|.+++....  .+++..++.++.|++.||.|||+.+|+||||||+||+++.++                      
T Consensus        79 ~~g~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~----------------------  134 (278)
T cd05606          79 MNGGDLHYHLSQHG--VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG----------------------  134 (278)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC----------------------
Confidence            9 999999987654  699999999999999999999999999999999999976544                      


Q ss_pred             CCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 047395          257 LPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME  334 (432)
Q Consensus       257 ~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~  334 (432)
                           .++|+|||++..... ......|+..|+|||++.+. .++.++||||+||++|+|++|..||.............
T Consensus       135 -----~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~  209 (278)
T cd05606         135 -----HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR  209 (278)
T ss_pred             -----CEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence                 455666665543221 12234689999999999754 58899999999999999999999997653221111000


Q ss_pred             HHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCC-
Q 047395          335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRL-  413 (432)
Q Consensus       335 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~-  413 (432)
                      .....                    .                          ...+...+..+.++|.+||..||.+|| 
T Consensus       210 ~~~~~--------------------~--------------------------~~~~~~~s~~~~~li~~~l~~~p~~R~~  243 (278)
T cd05606         210 MTLTM--------------------A--------------------------VELPDSFSPELRSLLEGLLQRDVNRRLG  243 (278)
T ss_pred             Hhhcc--------------------C--------------------------CCCCCcCCHHHHHHHHHHhhcCHHhccC
Confidence            00000                    0                          001123466789999999999999999 


Q ss_pred             ----CHHHHhcCCCCCCCcc
Q 047395          414 ----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       414 ----ta~elL~hp~f~~~~~  429 (432)
                          ++.++++||||+...+
T Consensus       244 ~~~~~~~~ll~~~~~~~~~~  263 (278)
T cd05606         244 CLGRGAQEVKEHPFFRSLDW  263 (278)
T ss_pred             CCCCCHHHHHhCccccCCCc
Confidence                9999999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3e-41  Score=316.13  Aligned_cols=264  Identities=24%  Similarity=0.381  Sum_probs=200.8

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--CCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--RNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--~~~  170 (432)
                      ++|++.+.||.|++|.||+|.+..+++.||+|.+....  .....+.+|++++..+.|     +||+++++++..  .+.
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~~~~~   75 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKS-----PYIVKYYGAFLDESSSS   75 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCC-----CCeeeeeeEEEccCCCe
Confidence            46899999999999999999999999999999987432  345678889999988877     999999998754  457


Q ss_pred             EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          171 ICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +|+||||+ +++|.+++...  ....+++..+..++.||+.||.|||+.|++|+||+|+||+++.+              
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~--------------  141 (287)
T cd06621          76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRK--------------  141 (287)
T ss_pred             EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecC--------------
Confidence            89999999 89999987642  22458999999999999999999999999999999999997554              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                   +.++|+|||++...... .....++..|+|||.+.+..++.++|||||||++|+|++|..||.....
T Consensus       142 -------------~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~  208 (287)
T cd06621         142 -------------GQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGE  208 (287)
T ss_pred             -------------CeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccC
Confidence                         45667777765543222 1234578889999999988899999999999999999999999976522


Q ss_pred             --HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          327 --LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       327 --~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                        ..............+..                   .+..                    .......++.+.+||.+|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~-------------------~~~~--------------------~~~~~~~~~~~~~li~~~  249 (287)
T cd06621         209 PPLGPIELLSYIVNMPNPE-------------------LKDE--------------------PGNGIKWSEEFKDFIKQC  249 (287)
T ss_pred             CCCChHHHHHHHhcCCchh-------------------hccC--------------------CCCCCchHHHHHHHHHHH
Confidence              00011110000000000                   0000                    000012356688999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          405 LRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      |..||++|||+.|++.||||++...
T Consensus       250 l~~~p~~Rpt~~eil~~~~~~~~~~  274 (287)
T cd06621         250 LEKDPTRRPTPWDMLEHPWIKAQMK  274 (287)
T ss_pred             cCCCcccCCCHHHHHhCcccccccc
Confidence            9999999999999999999976544

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-41  Score=316.38  Aligned_cols=275  Identities=34%  Similarity=0.579  Sum_probs=216.8

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      |++.+.||+|+||.||+|.+..+++.||+|++...   ....+.+..|+.+++.+.|     ++++++++++......++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~~~~~~~~   75 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKH-----PNIVKLLDVIHTERKLYL   75 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCC-----CCHHHHHhhhhcCCceEE
Confidence            67788999999999999999999999999998753   2334566788888888876     999999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          174 VFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       174 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      ||||++++|.+++.... ..+++..+..++.|++.||.|||++||+||||+|+||+++.                     
T Consensus        76 v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~---------------------  133 (282)
T cd07829          76 VFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR---------------------  133 (282)
T ss_pred             EecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcC---------------------
Confidence            99999889999998763 36999999999999999999999999999999999999654                     


Q ss_pred             cccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                            ++.++|+|||.+.......   ....++..|+|||.+.+. .++.++|||||||++|||++|.+||...+..+.
T Consensus       134 ------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~  207 (282)
T cd07829         134 ------DGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ  207 (282)
T ss_pred             ------CCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence                  4556666766655432221   223457789999999876 788999999999999999999999999888888


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      +..+.+..+......+........ + ..   .++....               .......+..+..+.++|.+||+.||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~~---~~~~~~~---------------~~~~~~~~~~~~~~~~~i~~~l~~~P  267 (282)
T cd07829         208 LFKIFQILGTPTEESWPGVTKLPD-Y-KP---TFPKFPP---------------KDLEKVLPRLDPEGIDLLSKMLQYNP  267 (282)
T ss_pred             HHHHHHHhCCCcHHHHHhhccccc-c-cc---cccccCc---------------cchHHhcccccHHHHHHHHHhhccCc
Confidence            888888777766665544433210 0 00   0000000               00011123346679999999999999


Q ss_pred             CCCCCHHHHhcCCCC
Q 047395          410 SSRLTAHDALKHPFF  424 (432)
Q Consensus       410 ~~R~ta~elL~hp~f  424 (432)
                      ++||++.++++||||
T Consensus       268 ~~Rp~~~~~l~~p~~  282 (282)
T cd07829         268 AKRISAKEALKHPYF  282 (282)
T ss_pred             ccCCCHHHHhhCcCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-43  Score=308.43  Aligned_cols=289  Identities=28%  Similarity=0.492  Sum_probs=233.8

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC-
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR-  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~-  168 (432)
                      +..||.-++.+|.|.- .|.-|.|.-++++||+|.+...   ........+|..++..+.|     +||++++.+|.-. 
T Consensus        15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~-----~nii~l~n~ftP~~   88 (369)
T KOG0665|consen   15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNH-----KNIISLLNVFTPQK   88 (369)
T ss_pred             eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcc-----cceeeeeeccCccc
Confidence            3568999999999999 8889999999999999987532   2334567789999999988     9999999998754 


Q ss_pred             -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          169 -----NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       169 -----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                           ..+|+|||++..+|.+.+..    .++-+.+..|+.|++.|++|||+.||+||||||+||++..           
T Consensus        89 ~l~~~~e~y~v~e~m~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~-----------  153 (369)
T KOG0665|consen   89 TLEEFQEVYLVMELMDANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNS-----------  153 (369)
T ss_pred             cHHHHHhHHHHHHhhhhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecc-----------
Confidence                 36899999999999999984    3788999999999999999999999999999999999655           


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                      ...+||.|||+|+.....  .+..+.|..|.|||++.+..|...+||||+||++.||++|...|
T Consensus       154 ----------------~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf  217 (369)
T KOG0665|consen  154 ----------------DCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLF  217 (369)
T ss_pred             ----------------hhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEe
Confidence                            455666666666554433  34568899999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+..+++.++.+.+|.+.+++.+........++++..    +...  -++....+...... ..+..+..+..++||+
T Consensus       218 ~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~----~y~~--~~f~~~fpD~~f~~-~~e~~~~~~~~ardll  290 (369)
T KOG0665|consen  218 PGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRP----QYQA--ISFSELFPDSLFPV-VLEGSKLDCSLARDLL  290 (369)
T ss_pred             cCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcCh----Hhhc--cchhhhCCcccccc-cccCCccchHHHHHHH
Confidence            999999999999999999999999998888877776221    1100  11111111111111 1112234566799999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~  425 (432)
                      .+||..||++|.+++++|+||||+
T Consensus       291 ~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  291 SKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HHhhccChhhcccHHHHhcCCeee
Confidence            999999999999999999999998

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=5.1e-42  Score=322.83  Aligned_cols=252  Identities=24%  Similarity=0.455  Sum_probs=201.1

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      |.....||.|+||.||+|.+..+++.||+|++... ....+.+.+|+.++..+.|     +|++++++.+..++..|+||
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h-----p~i~~~~~~~~~~~~~~iv~   97 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH-----QNVVEMYKSYLVGEELWVLM   97 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCC-----CchhhhhhheeeCCeEEEEE
Confidence            44556899999999999999999999999998642 2334567788888888776     99999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          176 EML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ||+ +++|.+++...   .+++..++.++.||+.||.|||++||+||||||+||+++.                      
T Consensus        98 e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~----------------------  152 (297)
T cd06659          98 EFLQGGALTDIVSQT---RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL----------------------  152 (297)
T ss_pred             ecCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEcc----------------------
Confidence            999 89999988664   4899999999999999999999999999999999999654                      


Q ss_pred             ccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA  331 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~  331 (432)
                           ++.++|+|||++.....   ......|+..|+|||++.+..++.++|||||||++|||++|..||...+..+...
T Consensus       153 -----~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~  227 (297)
T cd06659         153 -----DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK  227 (297)
T ss_pred             -----CCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                 44566667666543221   1223568999999999998889999999999999999999999998665544433


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+...   .+..                                           .......+..+.++|.+||+.||++
T Consensus       228 ~~~~~---~~~~-------------------------------------------~~~~~~~~~~l~~~i~~~l~~~P~~  261 (297)
T cd06659         228 RLRDS---PPPK-------------------------------------------LKNAHKISPVLRDFLERMLTREPQE  261 (297)
T ss_pred             HHhcc---CCCC-------------------------------------------ccccCCCCHHHHHHHHHHhcCCccc
Confidence            22111   0000                                           0001234556889999999999999


Q ss_pred             CCCHHHHhcCCCCCCCcc
Q 047395          412 RLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       412 R~ta~elL~hp~f~~~~~  429 (432)
                      ||++.++++||||.+...
T Consensus       262 Rps~~~ll~~~~~~~~~~  279 (297)
T cd06659         262 RATAQELLDHPFLLQTGL  279 (297)
T ss_pred             CcCHHHHhhChhhccCCC
Confidence            999999999999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=5.2e-42  Score=321.43  Aligned_cols=260  Identities=24%  Similarity=0.384  Sum_probs=198.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|+..+.||+|+||.||++.+..+++.||+|.+...  ......+.+|+.++..+..    |+||+++++++..++..+
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~----~~~iv~~~~~~~~~~~~~   79 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSD----CPYIVKFYGALFREGDCW   79 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcC----CCCEeeeeeEEecCCcEE
Confidence            3567788999999999999999999999999998643  2334567788888887751    399999999998889999


Q ss_pred             EEEccCCCCHHHHHH---hcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          173 IVFEMLGPSLYDFLR---KNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       173 lv~e~~~~~L~~~l~---~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ++|||++++|.++..   ......+++..+..++.|++.||+|||+ .||+||||||+||+++.                
T Consensus        80 ~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~----------------  143 (288)
T cd06616          80 ICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR----------------  143 (288)
T ss_pred             EEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc----------------
Confidence            999999777766543   2223469999999999999999999997 59999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCC---CCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                 .+.++|+|||++......  .....|+..|+|||++.+.   .++.++|||||||++|+|++|+.||..
T Consensus       144 -----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  212 (288)
T cd06616         144 -----------NGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPK  212 (288)
T ss_pred             -----------CCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchh
Confidence                       445677777766543221  2234678899999999876   688999999999999999999999975


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      ...  ....+.+.....+...                                         .......++..+.+||.+
T Consensus       213 ~~~--~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~l~~li~~  249 (288)
T cd06616         213 WNS--VFDQLTQVVKGDPPIL-----------------------------------------SNSEEREFSPSFVNFINL  249 (288)
T ss_pred             cch--HHHHHhhhcCCCCCcC-----------------------------------------CCcCCCccCHHHHHHHHH
Confidence            441  1122222111110000                                         000012356678999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||+.||++|||++++++||||.+..
T Consensus       250 ~l~~~p~~Rpt~~~i~~~~~~~~~~  274 (288)
T cd06616         250 CLIKDESKRPKYKELLEHPFIKDYE  274 (288)
T ss_pred             HccCChhhCcCHHHHhcChhhhchh
Confidence            9999999999999999999998744

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=2.6e-41  Score=312.27  Aligned_cols=249  Identities=24%  Similarity=0.430  Sum_probs=200.0

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc--cCCe
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD--YRNH  170 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~--~~~~  170 (432)
                      +|++.+.||.|+||.||+|.+..+++.||+|+++..   ....+.+..|+.+++.+.|     +|++++++++.  .+..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~   75 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKH-----PNIVRYYDRIIDRSNQT   75 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCC-----CccceeeeeeecCCCCE
Confidence            589999999999999999999999999999998632   3344567789999998877     99999998764  4467


Q ss_pred             EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          171 ICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMH-----DLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH-----~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      .|++|||+ +++|.+++...  ....+++..++.++.||+.||.|||     +.+|+|+||||+||+++.          
T Consensus        76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~----------  145 (265)
T cd08217          76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA----------  145 (265)
T ss_pred             EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec----------
Confidence            89999999 89999999763  1246899999999999999999999     899999999999999755          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                       .+.++|+|||++.......   ....+++.|+|||++.+..++.++||||||+++|+|++|..
T Consensus       146 -----------------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~  208 (265)
T cd08217         146 -----------------NNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSP  208 (265)
T ss_pred             -----------------CCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCC
Confidence                             4456666666655433222   23468899999999998889999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||...+.......+....  .+                                              ......+..+.+
T Consensus       209 p~~~~~~~~~~~~~~~~~--~~----------------------------------------------~~~~~~~~~~~~  240 (265)
T cd08217         209 PFTARNQLQLASKIKEGK--FR----------------------------------------------RIPYRYSSELNE  240 (265)
T ss_pred             cccCcCHHHHHHHHhcCC--CC----------------------------------------------CCccccCHHHHH
Confidence            998766433332221110  00                                              011234566889


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      ++.+||+.+|++|||+.++++|||+
T Consensus       241 l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         241 VIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHHccCCcccCCCHHHHhhCCCC
Confidence            9999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=2e-41  Score=316.91  Aligned_cols=252  Identities=29%  Similarity=0.474  Sum_probs=201.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      ..|...+.||.|++|.||++.+..+++.+|+|.++... ...+.+.+|+.++..+.|     +|++++++++...+..|+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h-----~~vv~~~~~~~~~~~~~~   93 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH-----PNIVEMYSSYLVGDELWV   93 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCC-----CChheEEEEEEcCCeEEE
Confidence            34666789999999999999999999999999886432 334557789888888876     999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      |+||+ +++|.+++...   .+++..+..++.||+.||+|||++||+||||+|+||+++.+                   
T Consensus        94 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~-------------------  151 (285)
T cd06648          94 VMEFLEGGALTDIVTHT---RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSD-------------------  151 (285)
T ss_pred             EEeccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCC-------------------
Confidence            99999 99999999873   58999999999999999999999999999999999997554                   


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                              +.++|+|||.+......   .....|+..|+|||.+.+..++.++|||||||++|+|++|..||...+....
T Consensus       152 --------~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~  223 (285)
T cd06648         152 --------GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA  223 (285)
T ss_pred             --------CcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH
Confidence                    45666666654432211   1224688999999999988899999999999999999999999976554443


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+.....+..                                              .....++..+.+||.+||+.||
T Consensus       224 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~~l~~li~~~l~~~p  257 (285)
T cd06648         224 MKRIRDNLPPKL----------------------------------------------KNLHKVSPRLRSFLDRMLVRDP  257 (285)
T ss_pred             HHHHHhcCCCCC----------------------------------------------cccccCCHHHHHHHHHHcccCh
Confidence            333221100000                                              0011245668999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 047395          410 SSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       410 ~~R~ta~elL~hp~f~~~  427 (432)
                      ++|||+.++++||||++.
T Consensus       258 ~~Rpt~~~il~~~~~~~~  275 (285)
T cd06648         258 AQRATAAELLNHPFLAKA  275 (285)
T ss_pred             hhCcCHHHHccCcccccC
Confidence            999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=1.4e-41  Score=350.97  Aligned_cols=144  Identities=24%  Similarity=0.406  Sum_probs=131.0

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|+++++||+|+||+||+|++..+++.||||+++...    .....+..|+.++..++|     +||++++.++....+
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~Iv~~~~~~~~~~~   78 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKS-----PFIVHLYYSLQSANN   78 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCC-----CCcCeEEEEEEECCE
Confidence            67999999999999999999999999999999997532    233567788888888877     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||.+||+||||||+|||++.++.++|+|||++.
T Consensus        79 ~~lVmEy~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          79 VYLVMEYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            99999999 999999998754  58999999999999999999999999999999999999999999999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-42  Score=331.92  Aligned_cols=252  Identities=25%  Similarity=0.438  Sum_probs=208.6

Q ss_pred             cCce-EEEeeeecccceEEEEEEecCCCcEEEEEEee-----chhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           94 TSRY-KILRKIGEGTFGQVLDCLDRETGETVAIKVVR-----SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        94 ~~~y-~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~-----~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .+|| +...+||+|+|-+||+|.|..+|..||.-.++     +.....+.+..|+.+|+.|+|     +||+++++++.+
T Consensus        38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H-----~NIirfy~SW~d  112 (632)
T KOG0584|consen   38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKH-----PNIIRFYDSWVD  112 (632)
T ss_pred             CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCC-----Cceeeeeeheec
Confidence            3444 44578999999999999999999999876654     233445789999999999998     999999998876


Q ss_pred             CC--eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--CcEeccCCCCcEEeecCCccccCCcc
Q 047395          168 RN--HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL--RLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       168 ~~--~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ..  .+.+|+|++ .|+|..|+++.+  .++...++.|++||+.||.|||++  -|||||||-+||+|+.          
T Consensus       113 ~~n~~in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG----------  180 (632)
T KOG0584|consen  113 TDNKTINFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG----------  180 (632)
T ss_pred             CCCceeeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC----------
Confidence            54  588999999 999999999876  799999999999999999999987  5999999999999853          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCCc-cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                      ..+.|||+|+|+|....... ...+|||.|||||++. ..|+..+||||||++++||+|+.+||
T Consensus       181 ----------------~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPY  243 (632)
T KOG0584|consen  181 ----------------NLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPY  243 (632)
T ss_pred             ----------------CcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCCh
Confidence                            56889999999998765544 4469999999999998 57999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHh-CCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          322 QTHENLEHLAMMERVL-GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      ....+..++.  .++. |..|..+ ..+                                            -.+++++|
T Consensus       244 sEC~n~AQIY--KKV~SGiKP~sl-~kV--------------------------------------------~dPevr~f  276 (632)
T KOG0584|consen  244 SECTNPAQIY--KKVTSGIKPAAL-SKV--------------------------------------------KDPEVREF  276 (632)
T ss_pred             hhhCCHHHHH--HHHHcCCCHHHh-hcc--------------------------------------------CCHHHHHH
Confidence            8776644332  2222 3333322 111                                            13458899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      |.+||.. .++|+||.|+|+||||..+
T Consensus       277 IekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  277 IEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             HHHHhcC-chhccCHHHHhhChhhccc
Confidence            9999999 9999999999999999986

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=8.4e-42  Score=319.13  Aligned_cols=247  Identities=22%  Similarity=0.306  Sum_probs=196.7

Q ss_pred             CceEEEeeeecccceEEEEEEecCCC-----cEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETG-----ETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~-----~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ++|++.+.||+|+||.||+|.+...+     ..||+|.++..  ......+.+|+.++..+.|     +||+++++++..
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h-----~~i~~~~~~~~~   79 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQH-----PNIVCLLGVCTK   79 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCC-----cccceEEEEEcC
Confidence            47999999999999999999876554     68999998643  2334567889999988877     999999999998


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNY--------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  232 (432)
                      ....|++|||+ +++|.+++.....              ..+++..+..++.||+.||.|||++||+|+||||+||+++.
T Consensus        80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~  159 (283)
T cd05048          80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE  159 (283)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence            89999999999 8999999986421              35788999999999999999999999999999999999765


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHH
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSV  307 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSl  307 (432)
                      ++                           .++|+|||++......     .....+++.|+|||.+.+..++.++|||||
T Consensus       160 ~~---------------------------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~sl  212 (283)
T cd05048         160 GL---------------------------TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSF  212 (283)
T ss_pred             CC---------------------------cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHH
Confidence            44                           4555566555432111     122356788999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhh
Q 047395          308 GCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV  386 (432)
Q Consensus       308 Gvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (432)
                      ||++|||++ |..||.+.+..+....+.....  +                                             
T Consensus       213 G~il~el~~~g~~p~~~~~~~~~~~~i~~~~~--~---------------------------------------------  245 (283)
T cd05048         213 GVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQL--L---------------------------------------------  245 (283)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--C---------------------------------------------
Confidence            999999998 9999987665554433321100  0                                             


Q ss_pred             hhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       387 ~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                       .....++..+.+|+.+||+.||.+|||+.|++++
T Consensus       246 -~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         246 -PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             -CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence             0123456778999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1.5e-41  Score=313.58  Aligned_cols=246  Identities=21%  Similarity=0.333  Sum_probs=196.8

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .++|++.++||+|+||.||+|.+. ++..||+|.+.......+.+.+|+.+++.++|     +||+++++.+...+..++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~l   78 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQH-----DKLVRLYAVVTKEEPIYI   78 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCC-----CCeeeEEEEEcCCCCcEE
Confidence            367999999999999999999864 56789999987655556778899999999877     999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +|||+ +++|.+++.......+++..+..++.||+.||+|||+.+++||||||+||+++.++                  
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~------------------  140 (261)
T cd05072          79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESL------------------  140 (261)
T ss_pred             EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCC------------------
Confidence            99999 89999999876545689999999999999999999999999999999999976544                  


Q ss_pred             ccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                               .++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||......
T Consensus       141 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~  211 (261)
T cd05072         141 ---------MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS  211 (261)
T ss_pred             ---------cEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH
Confidence                     45555555554332211    12235667999999988889999999999999999998 99999876554


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .....+.....                        +                        .....++..+.++|.+||..
T Consensus       212 ~~~~~~~~~~~------------------------~------------------------~~~~~~~~~~~~li~~~l~~  243 (261)
T cd05072         212 DVMSALQRGYR------------------------M------------------------PRMENCPDELYDIMKTCWKE  243 (261)
T ss_pred             HHHHHHHcCCC------------------------C------------------------CCCCCCCHHHHHHHHHHccC
Confidence            44333321100                        0                        01123455688999999999


Q ss_pred             CCCCCCCHHHHhc
Q 047395          408 DPSSRLTAHDALK  420 (432)
Q Consensus       408 dP~~R~ta~elL~  420 (432)
                      ||++|||++++++
T Consensus       244 ~p~~Rp~~~~i~~  256 (261)
T cd05072         244 KAEERPTFDYLQS  256 (261)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=3.5e-41  Score=312.44  Aligned_cols=249  Identities=26%  Similarity=0.402  Sum_probs=195.0

Q ss_pred             EEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395           98 KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus        98 ~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      .....||+|+||.||+|.+..++..||+|.+... ......+.+|+.+++.++|     +||+++++++..++..++|+|
T Consensus        11 ~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~~~~~lv~e   85 (268)
T cd06624          11 GERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKH-----RNIVQYLGSDSENGFFKIFME   85 (268)
T ss_pred             CceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCC-----CCeeeeeeeeccCCEEEEEEe
Confidence            3446899999999999999999999999988643 3344578889999998877     999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          177 ML-GPSLYDFLRKNNYRPF--PVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l--~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |+ +++|.+++.... ..+  ++..+..++.||+.||.|||++||+||||||+||+++.                     
T Consensus        86 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~---------------------  143 (268)
T cd06624          86 QVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT---------------------  143 (268)
T ss_pred             cCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC---------------------
Confidence            99 899999998653 235  88889999999999999999999999999999999743                     


Q ss_pred             cccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCC--CCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLG--WSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                           ..+.++|+|||.+......   .....|+..|+|||++.+..  ++.++|||||||++|+|++|..||.......
T Consensus       144 -----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~  218 (268)
T cd06624         144 -----YSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ  218 (268)
T ss_pred             -----CCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh
Confidence                 2346778888876543221   12245788999999987643  7889999999999999999999997543211


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ..........                                              .....+...++.+.+||.+||+.+
T Consensus       219 ~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~  252 (268)
T cd06624         219 AAMFKVGMFK----------------------------------------------IHPEIPESLSAEAKNFILRCFEPD  252 (268)
T ss_pred             hhHhhhhhhc----------------------------------------------cCCCCCcccCHHHHHHHHHHcCCC
Confidence            1100000000                                              000112245566889999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 047395          409 PSSRLTAHDALKHPFF  424 (432)
Q Consensus       409 P~~R~ta~elL~hp~f  424 (432)
                      |++|||+.|++.||||
T Consensus       253 p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         253 PDKRASAHDLLQDPFL  268 (268)
T ss_pred             chhCCCHHHHHhCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=3.3e-41  Score=311.66  Aligned_cols=250  Identities=31%  Similarity=0.485  Sum_probs=198.5

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh---hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.+.||+|+||.||+|.+..+++.||+|.++....   ....+..|+.+++.++|     +||+++++.+...+.++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~-----~~i~~~~~~~~~~~~~~   75 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKH-----PNLVKYYGVEVHREKVY   75 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCC-----CChhheeeeEecCCEEE
Confidence            68999999999999999999998999999999875433   45678889999998877     99999999999899999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +|+||+ +++|.+++....  .+++..++.++.|++.||.|||+.||+|+||+|+||+++.++.                
T Consensus        76 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~----------------  137 (264)
T cd06626          76 IFMEYCSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGV----------------  137 (264)
T ss_pred             EEEecCCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC----------------
Confidence            999999 899999998754  5889999999999999999999999999999999999765554                


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC-------ccccccCCCcchhHHHhCCC---CCccchHHHHHHHHHHHHhCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE-------HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~---~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                 ++|+|||.+......       .....++..|+|||++.+..   ++.++|||||||++|+|++|..||
T Consensus       138 -----------~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf  206 (264)
T cd06626         138 -----------IKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPW  206 (264)
T ss_pred             -----------EEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCc
Confidence                       555555544432211       11245788999999998766   789999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ............... +..+                    ..|                        ....++..+.++|
T Consensus       207 ~~~~~~~~~~~~~~~-~~~~--------------------~~~------------------------~~~~~~~~~~~li  241 (264)
T cd06626         207 SELDNEFQIMFHVGA-GHKP--------------------PIP------------------------DSLQLSPEGKDFL  241 (264)
T ss_pred             cCCcchHHHHHHHhc-CCCC--------------------CCC------------------------cccccCHHHHHHH
Confidence            765432221111110 1100                    000                        0112355678999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      .+||+.||.+|||+.+++.|||+
T Consensus       242 ~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         242 DRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHccCCcccCCCHHHHhcCCCC
Confidence            99999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=2.2e-41  Score=312.74  Aligned_cols=254  Identities=28%  Similarity=0.476  Sum_probs=204.8

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++.+.||.|++|.||+|.+..+++.||+|++....  .....+.+|+..+..++|     +|++++++++...+..+
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~   75 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCES-----PYVVKCYGAFYKEGEIS   75 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-----CCeeeEEEEEccCCeEE
Confidence            36899999999999999999999999999999987543  345678889999988876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +||||+ +++|.+++....  .+++..+..++.||+.||.|||+ .|++|+||+|+||+++.                  
T Consensus        76 lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~------------------  135 (264)
T cd06623          76 IVLEYMDGGSLADLLKKVG--KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS------------------  135 (264)
T ss_pred             EEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC------------------
Confidence            999999 899999998753  69999999999999999999999 99999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                               ++.++|+|||.+.......   ....++..|+|||.+.+..++.++||||||+++|+|++|..||......
T Consensus       136 ---------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~  206 (264)
T cd06623         136 ---------KGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP  206 (264)
T ss_pred             ---------CCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc
Confidence                     4456666666655433221   2346788999999999888999999999999999999999999766421


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhccc-chHHHHHHHHHccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH-SAGYLIDLLQGLLR  406 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~L~  406 (432)
                      .....+........                                             ...... ++..+.++|.+||.
T Consensus       207 ~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~l~~li~~~l~  241 (264)
T cd06623         207 SFFELMQAICDGPP---------------------------------------------PSLPAEEFSPEFRDFISACLQ  241 (264)
T ss_pred             CHHHHHHHHhcCCC---------------------------------------------CCCCcccCCHHHHHHHHHHcc
Confidence            11111111111000                                             000112 55668999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 047395          407 YDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .+|++|||+.|+++||||++-
T Consensus       242 ~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         242 KDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             CChhhCCCHHHHHhCHHHHhc
Confidence            999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=1.8e-42  Score=322.63  Aligned_cols=249  Identities=29%  Similarity=0.462  Sum_probs=199.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +.|++.+.||+|+||.||+|.+..+++.||+|+++..  ......+.+|+.++..+.|     +||+++++.+..++..|
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~   78 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-----PYITRYYGSYLKGTKLW   78 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCC-----CccHhhhcccccCCceE
Confidence            4578889999999999999999999999999998632  2344567889998888876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++...   .+++..++.++.||+.||.|||++|++|+||+|+||++..++                 
T Consensus        79 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~-----------------  138 (277)
T cd06642          79 IIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG-----------------  138 (277)
T ss_pred             EEEEccCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC-----------------
Confidence            999999 89999998653   589999999999999999999999999999999999976544                 


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                .++|+|||++......   .....|+..|+|||++.+..++.++|||||||++|+|++|..||.......
T Consensus       139 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~  208 (277)
T cd06642         139 ----------DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR  208 (277)
T ss_pred             ----------CEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh
Confidence                      4566666655433221   122457889999999998889999999999999999999999997544332


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+....  .                       +                       ......+..+.++|.+||+.+
T Consensus       209 ~~~~~~~~~--~-----------------------~-----------------------~~~~~~~~~~~~li~~~l~~~  240 (277)
T cd06642         209 VLFLIPKNS--P-----------------------P-----------------------TLEGQYSKPFKEFVEACLNKD  240 (277)
T ss_pred             HHhhhhcCC--C-----------------------C-----------------------CCCcccCHHHHHHHHHHccCC
Confidence            221110000  0                       0                       001134556889999999999


Q ss_pred             CCCCCCHHHHhcCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~  426 (432)
                      |++|||+.++++||||..
T Consensus       241 p~~Rp~~~~il~~~~~~~  258 (277)
T cd06642         241 PRFRPTAKELLKHKFITR  258 (277)
T ss_pred             cccCcCHHHHHHhHHHHH
Confidence            999999999999999964

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=8.5e-42  Score=320.75  Aligned_cols=254  Identities=28%  Similarity=0.465  Sum_probs=203.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .++|++.+.||+|+||.||++.+..++..||+|.+... ....+.+.+|+.++..++|     +|++++++.+...+..|
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h-----p~i~~~~~~~~~~~~~~   92 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKH-----PNIVNYLDSYLVGDELW   92 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCC-----CCeeehhheeeeCCcEE
Confidence            46899999999999999999999889999999998632 2334567788888888876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +|+||+ +++|.+++.+.   .+++..+..++.|++.||.|||++|++|+||||+||+++.+                  
T Consensus        93 lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~------------------  151 (293)
T cd06647          93 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD------------------  151 (293)
T ss_pred             EEEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCC------------------
Confidence            999999 99999999764   48899999999999999999999999999999999997544                  


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                               +.++|+|||++......   .....|++.|+|||.+.+..++.++|||||||++|++++|..||...+...
T Consensus       152 ---------~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~  222 (293)
T cd06647         152 ---------GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR  222 (293)
T ss_pred             ---------CCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence                     45666666655432221   223468889999999988888999999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+..  +..+                    .                        .......+..+.++|.+||+.+
T Consensus       223 ~~~~~~~--~~~~--------------------~------------------------~~~~~~~~~~l~~li~~~l~~~  256 (293)
T cd06647         223 ALYLIAT--NGTP--------------------E------------------------LQNPEKLSAIFRDFLNRCLEMD  256 (293)
T ss_pred             heeehhc--CCCC--------------------C------------------------CCCccccCHHHHHHHHHHccCC
Confidence            2211100  0000                    0                        0011234556889999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCc
Q 047395          409 PSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~  428 (432)
                      |++||++.+++.||||+...
T Consensus       257 p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         257 VEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             hhhCcCHHHHhcCHHHhcCc
Confidence            99999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=8.7e-42  Score=318.47  Aligned_cols=246  Identities=21%  Similarity=0.305  Sum_probs=195.8

Q ss_pred             CceEEEeeeecccceEEEEEEecC-----CCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRE-----TGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ++|.+.+.||+|+||.||+|.+..     +++.||||+++...  .....+.+|+++++.+.|     +||+++++++..
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~   79 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQH-----ENIVKFYGVCTE   79 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCC-----CCchheeeEEec
Confidence            568999999999999999998753     36789999987532  235678899999999877     999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNN------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE  234 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  234 (432)
                      ....++||||+ +++|.+++...+            ...+++..+..++.||+.||.|||++||+||||||+||+++.++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~  159 (280)
T cd05049          80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDL  159 (280)
T ss_pred             CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCC
Confidence            99999999999 999999998643            13478899999999999999999999999999999999976554


Q ss_pred             ccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCCCCccchHHHHHH
Q 047395          235 YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC  309 (432)
Q Consensus       235 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv  309 (432)
                                                 .++|+|||++.....     ......+++.|+|||++.+..++.++|||||||
T Consensus       160 ---------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  212 (280)
T cd05049         160 ---------------------------VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV  212 (280)
T ss_pred             ---------------------------eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHH
Confidence                                       455555555443211     112234577899999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhh
Q 047395          310 ILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ  388 (432)
Q Consensus       310 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (432)
                      ++|+|++ |..||...+..+....+.......                                                
T Consensus       213 il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------------------------  244 (280)
T cd05049         213 VLWEIFTYGKQPWYGLSNEEVIECITQGRLLQ------------------------------------------------  244 (280)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCC------------------------------------------------
Confidence            9999998 999998766555443332111000                                                


Q ss_pred             hcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       389 ~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      ....++..+.++|.+||+.||++|||+.|+++
T Consensus       245 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         245 RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            01234566889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=3.1e-41  Score=314.36  Aligned_cols=251  Identities=21%  Similarity=0.308  Sum_probs=199.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecC-----CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE-----TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~-----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .++|++.+.||+|+||.||+|.+..     ++..||+|.+...  ......+.+|+.++..+.|     +||+++++++.
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~   79 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNH-----QNIVRLIGVSF   79 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEc
Confidence            4679999999999999999999887     7789999988632  2334567889998888877     99999999988


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCC
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNY-----RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      ..+..++||||+ +++|.+++.....     ..+++..+..++.||+.||.|||+++++||||||+|||++.++      
T Consensus        80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~------  153 (277)
T cd05036          80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG------  153 (277)
T ss_pred             cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC------
Confidence            888899999999 9999999987532     2488999999999999999999999999999999999987532      


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHH
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ell  315 (432)
                                        ....++|+|||++.......     .....+..|+|||++.+..++.++|||||||++|+|+
T Consensus       154 ------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~  215 (277)
T cd05036         154 ------------------PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIF  215 (277)
T ss_pred             ------------------CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHH
Confidence                              23457888888776542211     1122356799999999888999999999999999999


Q ss_pred             h-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          316 S-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       316 t-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      + |..||...+..+....+.....                      ..                          .+..++
T Consensus       216 ~~g~~pf~~~~~~~~~~~~~~~~~----------------------~~--------------------------~~~~~~  247 (277)
T cd05036         216 SLGYMPYPGRTNQEVMEFVTGGGR----------------------LD--------------------------PPKGCP  247 (277)
T ss_pred             cCCCCCCCCCCHHHHHHHHHcCCc----------------------CC--------------------------CCCCCC
Confidence            7 9999987665443332211100                      00                          012345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      ..+.++|.+||+.||++|||+.++++|
T Consensus       248 ~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         248 GPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            568899999999999999999999976

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=2e-41  Score=315.64  Aligned_cols=250  Identities=29%  Similarity=0.448  Sum_probs=201.3

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +-|++.+.||.|+||.||+|.+..+++.||||++...  ......+.+|+.++..+.|     +||+++++++..++..|
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~~~~~   78 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-----PYVTKYYGSYLKDTKLW   78 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCC-----CCEeEEEEEEEeCCeEE
Confidence            3478899999999999999999989999999997632  2334567789998888877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++...   .+++..+..++.|++.||.|||++|++|+||||+||+++.                   
T Consensus        79 lv~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~-------------------  136 (277)
T cd06641          79 IIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE-------------------  136 (277)
T ss_pred             EEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECC-------------------
Confidence            999999 88999998754   4899999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              ++.++|+|||++......   .....++..|+|||.+.+..++.++|+|||||++|+|++|..||.......
T Consensus       137 --------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~  208 (277)
T cd06641         137 --------HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK  208 (277)
T ss_pred             --------CCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH
Confidence                    345666777665443221   123467889999999988888999999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+...  ..+                                              .....++..+.++|.+||+.+
T Consensus       209 ~~~~~~~~--~~~----------------------------------------------~~~~~~~~~~~~~i~~~l~~~  240 (277)
T cd06641         209 VLFLIPKN--NPP----------------------------------------------TLEGNYSKPLKEFVEACLNKE  240 (277)
T ss_pred             HHHHHhcC--CCC----------------------------------------------CCCcccCHHHHHHHHHHccCC
Confidence            32222110  000                                              001234556889999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~  427 (432)
                      |.+||++.++++||||.+.
T Consensus       241 p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         241 PSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             hhhCcCHHHHHhCHHHhhh
Confidence            9999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=2.7e-41  Score=311.09  Aligned_cols=244  Identities=24%  Similarity=0.355  Sum_probs=194.8

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      ++|++.+.||+|+||.||+|.... +..+|+|.++........+.+|+.+++.+.|     +||+++++++......++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~iv   77 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSH-----PKLVQLYGVCTQQKPLYIV   77 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCC-----CCceeEEEEEccCCCEEEE
Confidence            468999999999999999998754 5679999987555455678889999999877     9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+ +++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+||+++.++                   
T Consensus        78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~-------------------  137 (256)
T cd05114          78 TEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTG-------------------  137 (256)
T ss_pred             EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCC-------------------
Confidence            9999 899999997643 3589999999999999999999999999999999999976544                   


Q ss_pred             cccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE  328 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~  328 (432)
                              .++|+|||.+.......    ....++..|+|||++.+..++.++|||||||++|+|++ |+.||...+..+
T Consensus       138 --------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~  209 (256)
T cd05114         138 --------VVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE  209 (256)
T ss_pred             --------eEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                    45556666554322111    11234567999999998889999999999999999999 999998776655


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.......                                                .+...+..+.++|.+||+.|
T Consensus       210 ~~~~i~~~~~~~------------------------------------------------~~~~~~~~~~~li~~c~~~~  241 (256)
T cd05114         210 VVEMISRGFRLY------------------------------------------------RPKLASMTVYEVMYSCWHEK  241 (256)
T ss_pred             HHHHHHCCCCCC------------------------------------------------CCCCCCHHHHHHHHHHccCC
Confidence            544432211000                                                01123445789999999999


Q ss_pred             CCCCCCHHHHhc
Q 047395          409 PSSRLTAHDALK  420 (432)
Q Consensus       409 P~~R~ta~elL~  420 (432)
                      |++|||++++++
T Consensus       242 p~~Rps~~~l~~  253 (256)
T cd05114         242 PEGRPTFAELLR  253 (256)
T ss_pred             cccCcCHHHHHH
Confidence            999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-41  Score=314.84  Aligned_cols=255  Identities=23%  Similarity=0.405  Sum_probs=200.9

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .|++.+.||.|+||.||+|.+..+++.||+|.++..  ......+.+|+.+++.+.+  ..|+|++++++++..+...|+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~--~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ--SQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc--CCCCCeeeEeeeeeeCCEEEE
Confidence            488899999999999999999999999999998642  2334567789999998874  234999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++...   .+++..+..++.|++.||.|||+.||+|+||+|+||+++.+                   
T Consensus        80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~-------------------  137 (277)
T cd06917          80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNT-------------------  137 (277)
T ss_pred             EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCC-------------------
Confidence            99999 99999998764   58999999999999999999999999999999999997554                   


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              +.++|+|||.+......   .....|+..|+|||.+.+. .++.++|+|||||++|+|++|..||.......
T Consensus       138 --------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~  209 (277)
T cd06917         138 --------GNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR  209 (277)
T ss_pred             --------CCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence                    45666666665443221   2234688899999998754 46889999999999999999999997654322


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+...   .+.                   .++                         ....+..+.++|.+||+.|
T Consensus       210 ~~~~~~~~---~~~-------------------~~~-------------------------~~~~~~~~~~~i~~~l~~~  242 (277)
T cd06917         210 AMMLIPKS---KPP-------------------RLE-------------------------DNGYSKLLREFVAACLDEE  242 (277)
T ss_pred             hhhccccC---CCC-------------------CCC-------------------------cccCCHHHHHHHHHHcCCC
Confidence            11110000   000                   000                         0124556889999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCcc
Q 047395          409 PSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~~  429 (432)
                      |++||++.++++||||++...
T Consensus       243 p~~R~~~~~il~~~~~~~~~~  263 (277)
T cd06917         243 PKERLSAEELLKSKWIKAHSK  263 (277)
T ss_pred             cccCcCHHHHhhChHhhcccc
Confidence            999999999999999987653

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=2.5e-41  Score=312.28  Aligned_cols=245  Identities=33%  Similarity=0.524  Sum_probs=197.0

Q ss_pred             eecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          103 IGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       103 lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      ||.|+||.||+|++..+++.+|+|++....    .....+.+|++++..+.|     +||+++++.+..+...|+||||+
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h-----~~i~~~~~~~~~~~~~~lv~e~~   75 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS-----PYVVKLYYSFQGKKNLYLVMEYL   75 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCC-----cchhHHHHheecCcEEEEEEecC
Confidence            689999999999999999999999986432    344567788888888876     99999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccC
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL  257 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  257 (432)
                       +++|.+++....  .+++..+..++.||+.||.|||++||+|+||+|+||+++.++                       
T Consensus        76 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~-----------------------  130 (265)
T cd05579          76 PGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG-----------------------  130 (265)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC-----------------------
Confidence             889999998754  689999999999999999999999999999999999976554                       


Q ss_pred             CCCCCeEEeecCCcccccC-----------CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          258 PKSSAIKVIDFGSTAYEHQ-----------EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       258 ~~~~~~kl~Dfg~a~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                          .++|+|||++.....           ......++..|+|||.+.+..++.++||||||+++|+|++|..||.....
T Consensus       131 ----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~  206 (265)
T cd05579         131 ----HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP  206 (265)
T ss_pred             ----CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH
Confidence                455555555443221           12234678899999999888889999999999999999999999987665


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+....+....                       ..++.                        ....+..+.++|.+||+
T Consensus       207 ~~~~~~~~~~~-----------------------~~~~~------------------------~~~~~~~~~~~i~~~l~  239 (265)
T cd05579         207 EEIFQNILNGK-----------------------IEWPE------------------------DVEVSDEAIDLISKLLV  239 (265)
T ss_pred             HHHHHHHhcCC-----------------------cCCCc------------------------cccCCHHHHHHHHHHhc
Confidence            44433322210                       11111                        00135668899999999


Q ss_pred             cCCCCCCCH---HHHhcCCCCCCCc
Q 047395          407 YDPSSRLTA---HDALKHPFFTRDY  428 (432)
Q Consensus       407 ~dP~~R~ta---~elL~hp~f~~~~  428 (432)
                      .+|++|||+   .++|+||||++..
T Consensus       240 ~~p~~Rpt~~~~~~~l~~~~~~~~~  264 (265)
T cd05579         240 PDPEKRLGAKSIEEIKNHPFFKGID  264 (265)
T ss_pred             CCHhhcCCCccHHHHhcCccccCCC
Confidence            999999999   9999999998643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=4.2e-41  Score=310.52  Aligned_cols=247  Identities=25%  Similarity=0.345  Sum_probs=197.1

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ...++|++.++||+|+||.||+|... +++.||+|.+.......+.+.+|+.+++.+.|     +|++++++++. .+..
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~-~~~~   75 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQH-----PRLVRLYAVVT-QEPI   75 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCC-----cCeeeEEEEEc-cCCc
Confidence            34578999999999999999999854 57889999998655556678899999999877     99999998874 4568


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +++|||+ +++|.+++.......+++..+..++.|++.||+|||+.|++||||||+||+++.+                 
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~-----------------  138 (260)
T cd05067          76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSET-----------------  138 (260)
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCC-----------------
Confidence            9999999 8999999987655578999999999999999999999999999999999997554                 


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHE  325 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~  325 (432)
                                +.++|+|||.+......    .....++..|+|||++.+..++.++|||||||++|+|++ |+.||.+.+
T Consensus       139 ----------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~  208 (260)
T cd05067         139 ----------LCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT  208 (260)
T ss_pred             ----------CCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence                      45666666655443311    112245678999999998889999999999999999999 999998766


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....+......                                                ......+.++.++|.+||
T Consensus       209 ~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~li~~~l  240 (260)
T cd05067         209 NPEVIQNLERGYRM------------------------------------------------PRPDNCPEELYELMRLCW  240 (260)
T ss_pred             hHHHHHHHHcCCCC------------------------------------------------CCCCCCCHHHHHHHHHHc
Confidence            55444333221110                                                001234556889999999


Q ss_pred             ccCCCCCCCHHHHhc
Q 047395          406 RYDPSSRLTAHDALK  420 (432)
Q Consensus       406 ~~dP~~R~ta~elL~  420 (432)
                      +.||++|||++++++
T Consensus       241 ~~~p~~Rp~~~~l~~  255 (260)
T cd05067         241 KEKPEERPTFEYLRS  255 (260)
T ss_pred             cCChhhCCCHHHHHH
Confidence            999999999999874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=3.9e-41  Score=310.02  Aligned_cols=245  Identities=23%  Similarity=0.340  Sum_probs=194.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      ++|++.+.||+|+||+||+|.+.. +..+|+|.++......+.+.+|+.++..+.|     +||+++++++......++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH-----EKLVQLYGVCTKQRPIYIV   77 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCC-----CCeeeEEEEEccCCCcEEE
Confidence            469999999999999999997654 4569999987654445678889999988876     9999999999988899999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+ +++|.+++.... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++                   
T Consensus        78 ~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~-------------------  137 (256)
T cd05113          78 TEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQG-------------------  137 (256)
T ss_pred             EEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC-------------------
Confidence            9999 899999998754 3689999999999999999999999999999999999976544                   


Q ss_pred             cccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE  328 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~  328 (432)
                              .+||+|||.+.......    ....++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+
T Consensus       138 --------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~  209 (256)
T cd05113         138 --------CVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE  209 (256)
T ss_pred             --------CEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence                    45566665544322111    11234567999999998889999999999999999998 999998666544


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.......                                                .....+..+.+++.+||+.|
T Consensus       210 ~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~li~~cl~~~  241 (256)
T cd05113         210 TVEKVSQGLRLY------------------------------------------------RPHLASEKVYAIMYSCWHEK  241 (256)
T ss_pred             HHHHHhcCCCCC------------------------------------------------CCCCCCHHHHHHHHHHcCCC
Confidence            333332211100                                                01123456889999999999


Q ss_pred             CCCCCCHHHHhcC
Q 047395          409 PSSRLTAHDALKH  421 (432)
Q Consensus       409 P~~R~ta~elL~h  421 (432)
                      |.+|||+.+++++
T Consensus       242 p~~Rp~~~~ll~~  254 (256)
T cd05113         242 AEERPTFQQLLSS  254 (256)
T ss_pred             cccCCCHHHHHHh
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=6.8e-41  Score=313.90  Aligned_cols=256  Identities=22%  Similarity=0.347  Sum_probs=196.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecC-----CCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRE-----TGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      ..++|++.++||+|+||.||+|.++.     .+..||+|.++...  .....+.+|+.+++.+.|     +|++++++++
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~   78 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC-----HHVVRLLGVV   78 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCC-----CCeeeEEEEE
Confidence            45789999999999999999997652     34589999886432  223456778888888876     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNN--------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYL  236 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  236 (432)
                      ...+..|+||||+ +++|.+++....        ...++...+..++.||+.||.|||++||+||||||+|||++.++  
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~--  156 (288)
T cd05061          79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF--  156 (288)
T ss_pred             cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCC--
Confidence            9889999999999 999999997632        12346678899999999999999999999999999999976544  


Q ss_pred             ccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHH
Q 047395          237 KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL  311 (432)
Q Consensus       237 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil  311 (432)
                                               .++|+|||+++.....     .....++..|+|||.+.+..++.++|||||||++
T Consensus       157 -------------------------~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l  211 (288)
T cd05061         157 -------------------------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL  211 (288)
T ss_pred             -------------------------cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHH
Confidence                                     4566666655432211     1112356779999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhc
Q 047395          312 IELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV  390 (432)
Q Consensus       312 ~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (432)
                      |||++ |..||.+....+....+...  ..+                    .                          ..
T Consensus       212 ~el~~~~~~p~~~~~~~~~~~~~~~~--~~~--------------------~--------------------------~~  243 (288)
T cd05061         212 WEITSLAEQPYQGLSNEQVLKFVMDG--GYL--------------------D--------------------------QP  243 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcC--CCC--------------------C--------------------------CC
Confidence            99998 78999876554433322110  000                    0                          01


Q ss_pred             ccchHHHHHHHHHccccCCCCCCCHHHHhc------CCCCCCCc
Q 047395          391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALK------HPFFTRDY  428 (432)
Q Consensus       391 ~~~~~~l~~li~~~L~~dP~~R~ta~elL~------hp~f~~~~  428 (432)
                      ...+..+.++|.+||+.||++|||+.++++      ||||....
T Consensus       244 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         244 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence            133456889999999999999999999987      99998753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=1.3e-42  Score=292.66  Aligned_cols=280  Identities=25%  Similarity=0.528  Sum_probs=218.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC--CeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR--NHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~--~~~  171 (432)
                      .++|++.+++|+|.|+.||.|....+++.++||+++..++  ..+.+|+.+|+.|..    ++||+++++...+.  ...
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk--kKIkREikIL~nL~g----g~NIi~L~DiV~Dp~Sktp  110 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK--KKIKREIKILQNLRG----GPNIIKLLDIVKDPESKTP  110 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH--HHHHHHHHHHHhccC----CCCeeehhhhhcCccccCc
Confidence            5789999999999999999999999999999999986543  568899999999973    59999999998764  567


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      .||+||+ ..+...+..     .++..+++.++.+++.||.|||++||+|||+||.|++|+.                  
T Consensus       111 aLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh------------------  167 (338)
T KOG0668|consen  111 SLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH------------------  167 (338)
T ss_pred             hhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech------------------
Confidence            8999999 666655543     4888999999999999999999999999999999999854                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCC-CCCCc
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALF-QTHEN  326 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf-~~~~~  326 (432)
                              ....++|+|+|+|.+.....  +..+.+..|.-||++... .|+.+-|+|||||+|..|+..+.|| .+.++
T Consensus       168 --------~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN  239 (338)
T KOG0668|consen  168 --------ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  239 (338)
T ss_pred             --------hhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC
Confidence                    45679999999998765544  445778899999999875 4889999999999999999987776 68889


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcC---chhhhh-hhhhcccchHHHHHHHH
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL---PRLQNL-VMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~l~~li~  402 (432)
                      .+++..|.+++|.-..  ..        ++.+-....      .+.+..++..   .....+ ......-.++++.|||.
T Consensus       240 ~DQLVkIakVLGt~el--~~--------Yl~KY~i~L------dp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlld  303 (338)
T KOG0668|consen  240 YDQLVKIAKVLGTDEL--YA--------YLNKYQIDL------DPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLD  303 (338)
T ss_pred             HHHHHHHHHHhChHHH--HH--------HHHHHccCC------ChhHhhHhhccccccHHHhCCccccccCChHHHHHHH
Confidence            9999999999985321  11        111111111      0111111110   011111 11222345688999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ++|..|..+|+||.|++.||||..
T Consensus       304 klLrYDHqeRlTakEam~HpyF~~  327 (338)
T KOG0668|consen  304 KLLRYDHQERLTAKEAMAHPYFAP  327 (338)
T ss_pred             HHHhhccccccchHHHhcCchHHH
Confidence            999999999999999999999964

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=4.2e-41  Score=314.98  Aligned_cols=257  Identities=31%  Similarity=0.488  Sum_probs=207.6

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ...+.|++.+.||.|++|.||+|.+..++..||+|+++......+.+..|++.+..+.|     +|++++++.+...+..
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~   90 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKH-----PNIVDYYDSYLVGDEL   90 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCC-----CCeeEEEEEEEECCEE
Confidence            45677999999999999999999999889999999997654455677889999988877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+|+||+ +++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||+|+||+++.++                
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~----------------  153 (286)
T cd06614          91 WVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDG----------------  153 (286)
T ss_pred             EEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCC----------------
Confidence            9999999 799999998864 3699999999999999999999999999999999999976544                


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                                 .++|+|||.+......   .....++..|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus       154 -----------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~  222 (286)
T cd06614         154 -----------SVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL  222 (286)
T ss_pred             -----------CEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH
Confidence                       4555555554332211   12335788899999999888999999999999999999999999866554


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .....+...  ..+.                    .                        .....++..+.++|.+||+.
T Consensus       223 ~~~~~~~~~--~~~~--------------------~------------------------~~~~~~~~~l~~li~~~l~~  256 (286)
T cd06614         223 RALFLITTK--GIPP--------------------L------------------------KNPEKWSPEFKDFLNKCLVK  256 (286)
T ss_pred             HHHHHHHhc--CCCC--------------------C------------------------cchhhCCHHHHHHHHHHhcc
Confidence            333222110  0000                    0                        00112455688999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~  427 (432)
                      +|.+|||+.++++||||++.
T Consensus       257 ~p~~Rpt~~~il~~~~~~~~  276 (286)
T cd06614         257 DPEKRPSAEELLQHPFLKKA  276 (286)
T ss_pred             ChhhCcCHHHHhhChHhhcc
Confidence            99999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=4.6e-41  Score=310.63  Aligned_cols=245  Identities=27%  Similarity=0.343  Sum_probs=193.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .++|++.++||+|+||.||+|.+..+ ..||+|+++......+.+.+|+.++..+.|     +||+++++.+.. ...++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~-----~~i~~~~~~~~~-~~~~l   77 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQLYAVVSE-EPIYI   77 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCC-----CCcceEEEEECC-CCcEE
Confidence            46799999999999999999988655 469999997644445678889999998876     999999987754 56899


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++.......+++..+..++.|++.||.|||+.+|+||||||+||+++.+                   
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~-------------------  138 (262)
T cd05071          78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------------------  138 (262)
T ss_pred             EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCC-------------------
Confidence            99999 8899999987544468999999999999999999999999999999999997554                   


Q ss_pred             ccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                              +.++|+|||.+.......    ....++..|+|||+..+..++.++|||||||++|+|++ |..||......
T Consensus       139 --------~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~  210 (262)
T cd05071         139 --------LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  210 (262)
T ss_pred             --------CcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence                    456666666654332211    12245678999999988889999999999999999999 88999876554


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+..... .+                                               ....++..+.+||.+||+.
T Consensus       211 ~~~~~~~~~~~-~~-----------------------------------------------~~~~~~~~l~~li~~~l~~  242 (262)
T cd05071         211 EVLDQVERGYR-MP-----------------------------------------------CPPECPESLHDLMCQCWRK  242 (262)
T ss_pred             HHHHHHhcCCC-CC-----------------------------------------------CccccCHHHHHHHHHHccC
Confidence            43333211100 00                                               0123455688999999999


Q ss_pred             CCCCCCCHHHHhc
Q 047395          408 DPSSRLTAHDALK  420 (432)
Q Consensus       408 dP~~R~ta~elL~  420 (432)
                      ||++|||+.++++
T Consensus       243 ~p~~Rp~~~~~~~  255 (262)
T cd05071         243 EPEERPTFEYLQA  255 (262)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999885

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.3e-41  Score=309.99  Aligned_cols=246  Identities=24%  Similarity=0.358  Sum_probs=196.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .++|++.+.||+|++|.||+|.+. +++.||+|.++........+.+|+.++..+.|     +|++++++++...+..|+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~l   78 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRH-----PKLIQLYAVCTLEEPIYI   78 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCC-----CCccceeEEEecCCCeee
Confidence            467999999999999999999865 45789999987655455678889999999877     999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++                  
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~------------------  140 (261)
T cd05068          79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN------------------  140 (261)
T ss_pred             eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC------------------
Confidence            99999 99999999875545689999999999999999999999999999999999976544                  


Q ss_pred             ccccCCCCCCeEEeecCCcccccCCc-cc---cccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQEH-NY---IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~---~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                               .++|+|||++....... ..   ...+..|+|||++.+..++.++|||||||++|+|++ |+.||.+....
T Consensus       141 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  211 (261)
T cd05068         141 ---------ICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA  211 (261)
T ss_pred             ---------CEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence                     45666666554432111 11   122457999999998889999999999999999999 99999876655


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .....+..... .+                                               .....+..+.+++.+||+.
T Consensus       212 ~~~~~~~~~~~-~~-----------------------------------------------~~~~~~~~~~~li~~~l~~  243 (261)
T cd05068         212 EVLQQVDQGYR-MP-----------------------------------------------CPPGCPKELYDIMLDCWKE  243 (261)
T ss_pred             HHHHHHHcCCC-CC-----------------------------------------------CCCcCCHHHHHHHHHHhhc
Confidence            44433322110 00                                               0123455688999999999


Q ss_pred             CCCCCCCHHHHhc
Q 047395          408 DPSSRLTAHDALK  420 (432)
Q Consensus       408 dP~~R~ta~elL~  420 (432)
                      ||++||+++++++
T Consensus       244 ~P~~Rp~~~~l~~  256 (261)
T cd05068         244 DPDDRPTFETLQW  256 (261)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=4.8e-41  Score=345.52  Aligned_cols=268  Identities=21%  Similarity=0.271  Sum_probs=196.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.++||+|+||.||+|++..+++.||||+++..    ......+.+|++++..+.|     |||+++++++..++.
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~H-----PNIVkl~~v~~d~~~   76 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIH-----PGIVPVYSICSDGDP   76 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCC-----cCcCeEEEEEeeCCE
Confidence            5899999999999999999999999999999998642    2334568889999999887     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNN---------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      .|+||||+ |++|.+++....         ...++...+..++.||+.||+|||++||+||||||+|||++.++.++++|
T Consensus        77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiD  156 (932)
T PRK13184         77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILD  156 (932)
T ss_pred             EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEe
Confidence            99999999 999999987421         12356677889999999999999999999999999999988777777777


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                      ||++.........      ........-+............+||+.|+|||++.+..++.++|||||||++|||+||..|
T Consensus       157 FGLAk~i~~~~~~------~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P  230 (932)
T PRK13184        157 WGAAIFKKLEEED------LLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP  230 (932)
T ss_pred             cCcceeccccccc------ccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence            7766433111000      0000000000000001112235799999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...........  ... ..|..                                           ......+++.+.++
T Consensus       231 F~~~~~~ki~~~--~~i-~~P~~-------------------------------------------~~p~~~iP~~L~~L  264 (932)
T PRK13184        231 YRRKKGRKISYR--DVI-LSPIE-------------------------------------------VAPYREIPPFLSQI  264 (932)
T ss_pred             CCCcchhhhhhh--hhc-cChhh-------------------------------------------ccccccCCHHHHHH
Confidence            976443221110  000 00000                                           00012456668899


Q ss_pred             HHHccccCCCCCCCHHHHh
Q 047395          401 LQGLLRYDPSSRLTAHDAL  419 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL  419 (432)
                      +.+||+.||++|++..+.+
T Consensus       265 I~rcL~~DP~kR~ss~eeL  283 (932)
T PRK13184        265 AMKALAVDPAERYSSVQEL  283 (932)
T ss_pred             HHHHccCChhhCcCHHHHH
Confidence            9999999999998765544

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=2.6e-41  Score=323.28  Aligned_cols=250  Identities=21%  Similarity=0.322  Sum_probs=190.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecC-----CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE-----TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~-----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .++|++.+.||.|+||.||+|++..     +++.||+|+++..  ......+..|+.++..+.+    |+||+++++++.
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~----h~niv~~~~~~~   81 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGH----HLNVVNLLGACT   81 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhcc----CcchhheeeeEe
Confidence            4689999999999999999997543     4578999998642  2334567789998888832    399999999765


Q ss_pred             -cCCeEEEEEccC-CCCHHHHHHhcCC-----------------------------------------------------
Q 047395          167 -YRNHICIVFEML-GPSLYDFLRKNNY-----------------------------------------------------  191 (432)
Q Consensus       167 -~~~~~~lv~e~~-~~~L~~~l~~~~~-----------------------------------------------------  191 (432)
                       .+..++++|||+ +++|.+++.....                                                     
T Consensus        82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (337)
T cd05054          82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE  161 (337)
T ss_pred             cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence             456789999999 9999999865321                                                     


Q ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEE
Q 047395          192 ------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV  265 (432)
Q Consensus       192 ------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl  265 (432)
                            ..+++..+..++.||+.||.|||++||+||||||+|||++.+                           +.++|
T Consensus       162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~---------------------------~~vkL  214 (337)
T cd05054         162 GDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN---------------------------NVVKI  214 (337)
T ss_pred             hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC---------------------------CcEEE
Confidence                  257899999999999999999999999999999999997644                           45666


Q ss_pred             eecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCC
Q 047395          266 IDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGP  339 (432)
Q Consensus       266 ~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~  339 (432)
                      +|||++......     .....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.+...... +.
T Consensus       215 ~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~  293 (337)
T cd05054         215 CDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE-GT  293 (337)
T ss_pred             eccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc-cC
Confidence            777766543211     122345678999999999999999999999999999998 99999764432221111000 00


Q ss_pred             CCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHh
Q 047395          340 IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL  419 (432)
Q Consensus       340 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL  419 (432)
                      .                                              .......++.+.+++.+||+.+|++||++.|++
T Consensus       294 ~----------------------------------------------~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell  327 (337)
T cd05054         294 R----------------------------------------------MRAPEYATPEIYSIMLDCWHNNPEDRPTFSELV  327 (337)
T ss_pred             C----------------------------------------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            0                                              000123456688999999999999999999998


Q ss_pred             cC
Q 047395          420 KH  421 (432)
Q Consensus       420 ~h  421 (432)
                      +|
T Consensus       328 ~~  329 (337)
T cd05054         328 EI  329 (337)
T ss_pred             HH
Confidence            75

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.5e-40  Score=304.62  Aligned_cols=249  Identities=32%  Similarity=0.537  Sum_probs=205.2

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh-hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      .|++.+.||+|++|.||++.+..+++.+++|++..... ....+.+|++++..+.|     ++++++++.+......+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~l~   75 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH-----PNIVKYYGSYLKKDELWIV   75 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCC-----CCEeEEEEEEecCCeEEEE
Confidence            48889999999999999999998999999999875433 55678889999888876     9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      +||+ +++|.+++.... ..+++..+..++.|++.||.|||++|++|+||+|+||+++                      
T Consensus        76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~----------------------  132 (253)
T cd05122          76 MEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT----------------------  132 (253)
T ss_pred             EecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc----------------------
Confidence            9999 799999998763 4699999999999999999999999999999999999964                      


Q ss_pred             cccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA  331 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~  331 (432)
                           .++.++|+|||.+.......  ....++..|+|||.+.+..++.++||||||+++|+|++|..||...+......
T Consensus       133 -----~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  207 (253)
T cd05122         133 -----SDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF  207 (253)
T ss_pred             -----cCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH
Confidence                 45567888888776654443  45678899999999998888999999999999999999999998765433332


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+..  ...+.                    .+                        ....++..+.++|.+||+.||++
T Consensus       208 ~~~~--~~~~~--------------------~~------------------------~~~~~~~~~~~~i~~~l~~~p~~  241 (253)
T cd05122         208 KIAT--NGPPG--------------------LR------------------------NPEKWSDEFKDFLKKCLQKNPEK  241 (253)
T ss_pred             HHHh--cCCCC--------------------cC------------------------cccccCHHHHHHHHHHccCChhh
Confidence            2211  00000                    00                        00113556889999999999999


Q ss_pred             CCCHHHHhcCCC
Q 047395          412 RLTAHDALKHPF  423 (432)
Q Consensus       412 R~ta~elL~hp~  423 (432)
                      |||+.|+++|||
T Consensus       242 R~t~~~~l~~~~  253 (253)
T cd05122         242 RPTAEQLLKHPF  253 (253)
T ss_pred             CCCHHHHhcCCC
Confidence            999999999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=7.5e-41  Score=311.78  Aligned_cols=250  Identities=20%  Similarity=0.332  Sum_probs=193.4

Q ss_pred             eecCceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNW  164 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~  164 (432)
                      ...++|++.+.||+|+||.||+|.+.     .++..||+|+++...  .....+.+|+.+++.+.|     +||++++++
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~iv~~~~~   77 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC-----HHVVRLLGV   77 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC-----CCeeeEEEE
Confidence            34678999999999999999999865     235689999886422  234457789988888876     999999999


Q ss_pred             cccCCeEEEEEccC-CCCHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCc
Q 047395          165 FDYRNHICIVFEML-GPSLYDFLRKNNY--------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEY  235 (432)
Q Consensus       165 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~  235 (432)
                      +..++..++||||+ +++|.+++.....        ..+++..+..++.|++.||.|||+.|++||||||+||+++.++ 
T Consensus        78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~-  156 (277)
T cd05062          78 VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-  156 (277)
T ss_pred             EcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCC-
Confidence            99999999999999 8999999976321        2357788999999999999999999999999999999976544 


Q ss_pred             cccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHH
Q 047395          236 LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI  310 (432)
Q Consensus       236 ~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvi  310 (432)
                                                .++|+|||++......     .....++..|+|||++.+..++.++|||||||+
T Consensus       157 --------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  210 (277)
T cd05062         157 --------------------------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV  210 (277)
T ss_pred             --------------------------CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHH
Confidence                                      4555666655432211     111245678999999998889999999999999


Q ss_pred             HHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhh
Q 047395          311 LIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH  389 (432)
Q Consensus       311 l~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (432)
                      +|||++ |..||.+.+..+....+....  .+                                              ..
T Consensus       211 l~el~~~~~~p~~~~~~~~~~~~~~~~~--~~----------------------------------------------~~  242 (277)
T cd05062         211 LWEIATLAEQPYQGMSNEQVLRFVMEGG--LL----------------------------------------------DK  242 (277)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcCC--cC----------------------------------------------CC
Confidence            999999 789998765544433221110  00                                              00


Q ss_pred             cccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       390 ~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      ...++..+.++|.+||+.||++|||+.|++++
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         243 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            12345568899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=9e-41  Score=316.73  Aligned_cols=255  Identities=25%  Similarity=0.379  Sum_probs=203.2

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ..+.|...++||+|+||+||+|.+..+++.||+|++...    ......+..|+.+++.++|     +|++++++++...
T Consensus        19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~   93 (313)
T cd06633          19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH-----PNTIEYKGCYLKE   93 (313)
T ss_pred             HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCC-----CCCccEEEEEEeC
Confidence            345588889999999999999999999999999998632    2233457788888888876     9999999999999


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          169 NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       169 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ...|+||||+.++|.+++.... .++++..+..++.||+.||.|||++||+|+||||+||++..                
T Consensus        94 ~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~----------------  156 (313)
T cd06633          94 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE----------------  156 (313)
T ss_pred             CEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECC----------------
Confidence            9999999999889988887654 46899999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHh---CCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                 ++.++|+|||++.... ......|+..|+|||++.   ...++.++|||||||++|+|++|..||...+
T Consensus       157 -----------~~~~kL~dfg~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~  224 (313)
T cd06633         157 -----------PGQVKLADFGSASKSS-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  224 (313)
T ss_pred             -----------CCCEEEeecCCCcccC-CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                       4457777777664432 223456889999999985   3457889999999999999999999998765


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .......+...  ..+.                                             .....++..+.+||.+||
T Consensus       225 ~~~~~~~~~~~--~~~~---------------------------------------------~~~~~~~~~l~~li~~~l  257 (313)
T cd06633         225 AMSALYHIAQN--DSPT---------------------------------------------LQSNEWTDSFRGFVDYCL  257 (313)
T ss_pred             hHHHHHHHHhc--CCCC---------------------------------------------CCccccCHHHHHHHHHHc
Confidence            54433332111  0000                                             001123455889999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCc
Q 047395          406 RYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +.+|.+||++.++++||||....
T Consensus       258 ~~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         258 QKIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             cCChhhCcCHHHHhcCcccCCCc
Confidence            99999999999999999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=5.1e-41  Score=309.91  Aligned_cols=246  Identities=24%  Similarity=0.346  Sum_probs=194.6

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ..++|++.++||+|+||.||+|.+. .+..+|+|.++......+.+.+|+.+++.++|     ++++++++++.. ...+
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~-----~~i~~~~~~~~~-~~~~   76 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRH-----DKLVQLYAVVSE-EPIY   76 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCC-----CceEEEEeEECC-CCcE
Confidence            3568999999999999999999865 56679999997655555678899999999987     999999998754 5688


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      ++|||+ +++|.+++.......+++..++.++.|++.||.|||++||+||||||+||++++++                 
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~-----------------  139 (260)
T cd05070          77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGL-----------------  139 (260)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCc-----------------
Confidence            999999 89999999875545689999999999999999999999999999999999976544                 


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCc
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHEN  326 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~  326 (432)
                                .++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+.
T Consensus       140 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~  209 (260)
T cd05070         140 ----------VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN  209 (260)
T ss_pred             ----------eEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence                      45555665554322211    11234567999999988889999999999999999999 9999987665


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+....+..... .                                               ......+..+.+||.+||.
T Consensus       210 ~~~~~~~~~~~~-~-----------------------------------------------~~~~~~~~~~~~li~~~l~  241 (260)
T cd05070         210 REVLEQVERGYR-M-----------------------------------------------PCPQDCPISLHELMLQCWK  241 (260)
T ss_pred             HHHHHHHHcCCC-C-----------------------------------------------CCCCcCCHHHHHHHHHHcc
Confidence            544433321100 0                                               0112345568899999999


Q ss_pred             cCCCCCCCHHHHhc
Q 047395          407 YDPSSRLTAHDALK  420 (432)
Q Consensus       407 ~dP~~R~ta~elL~  420 (432)
                      .||++|||++++++
T Consensus       242 ~~p~~Rpt~~~l~~  255 (260)
T cd05070         242 KDPEERPTFEYLQS  255 (260)
T ss_pred             cCcccCcCHHHHHH
Confidence            99999999999873

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-40  Score=305.28  Aligned_cols=247  Identities=32%  Similarity=0.478  Sum_probs=203.1

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.+.||+|++|.||+|.+..+++.||+|.+....   ...+.+.+|++++..+.|     ++++++++++...+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~   75 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKH-----PNIVKYIGSIETSDSLY   75 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCC-----CCccEEEEEEEeCCEEE
Confidence            5889999999999999999999999999999987543   345678889999888876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +|||++ +++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||+++.                   
T Consensus        76 ~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~-------------------  134 (254)
T cd06627          76 IILEYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK-------------------  134 (254)
T ss_pred             EEEecCCCCcHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC-------------------
Confidence            999999 889999998763  6999999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              ++.++|+|||.+.......   ....++..|+|||.+.+..++.++||||||+++|+|++|..||...+...
T Consensus       135 --------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~  206 (254)
T cd06627         135 --------DGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA  206 (254)
T ss_pred             --------CCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence                    4556777777665543332   23467889999999988888999999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+..  ...                                              ......++..+.++|.+||..+
T Consensus       207 ~~~~~~~--~~~----------------------------------------------~~~~~~~~~~~~~~i~~~l~~~  238 (254)
T cd06627         207 ALFRIVQ--DDH----------------------------------------------PPLPEGISPELKDFLMQCFQKD  238 (254)
T ss_pred             HHHHHhc--cCC----------------------------------------------CCCCCCCCHHHHHHHHHHHhCC
Confidence            2222110  000                                              0011234566889999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 047395          409 PSSRLTAHDALKHPFF  424 (432)
Q Consensus       409 P~~R~ta~elL~hp~f  424 (432)
                      |++|||+.+++.||||
T Consensus       239 p~~R~~~~~~l~~~~~  254 (254)
T cd06627         239 PNLRPTAKQLLKHPWI  254 (254)
T ss_pred             hhhCcCHHHHhcCCCC
Confidence            9999999999999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.6e-41  Score=308.96  Aligned_cols=245  Identities=22%  Similarity=0.314  Sum_probs=194.8

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      .+|++.+.||+|+||.||+|.+. ++..+|+|++.........+.+|+.+++.+.|     +||+++++++...+..|+|
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSH-----PNLVQLYGVCTKQRPIFIV   77 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCC-----CCEEEEEEEEcCCCceEEE
Confidence            35889999999999999999876 46789999987544445667889999998876     9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++                   
T Consensus        78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~-------------------  137 (256)
T cd05059          78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDN-------------------  137 (256)
T ss_pred             EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCC-------------------
Confidence            9999 999999998654 3689999999999999999999999999999999999976544                   


Q ss_pred             cccCCCCCCeEEeecCCcccccCCcc----ccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQEHN----YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE  328 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~  328 (432)
                              .+||+|||.+........    ...++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+
T Consensus       138 --------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  209 (256)
T cd05059         138 --------VVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE  209 (256)
T ss_pred             --------cEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence                    456666665543322111    1123457999999998889999999999999999999 899998766544


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.....                                                ......++..+.+++.+||..+
T Consensus       210 ~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~li~~cl~~~  241 (256)
T cd05059         210 VVESVSAGYR------------------------------------------------LYRPKLAPTEVYTIMYSCWHEK  241 (256)
T ss_pred             HHHHHHcCCc------------------------------------------------CCCCCCCCHHHHHHHHHHhcCC
Confidence            4333221100                                                0011234666899999999999


Q ss_pred             CCCCCCHHHHhcC
Q 047395          409 PSSRLTAHDALKH  421 (432)
Q Consensus       409 P~~R~ta~elL~h  421 (432)
                      |++|||+.|+++.
T Consensus       242 p~~Rpt~~~~l~~  254 (256)
T cd05059         242 PEDRPAFKKLLSQ  254 (256)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=6.3e-41  Score=316.36  Aligned_cols=247  Identities=22%  Similarity=0.289  Sum_probs=191.5

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcE--EEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeecccccCC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGET--VAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~--vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ++|++.+.||+|+||.||+|.+..++..  +|+|.++..  ......+.+|+.++..+ .|     +||+++++++...+
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h-----~~iv~~~~~~~~~~   81 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH-----PNIINLLGACEHRG   81 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCC-----CCcceEEEEECCCC
Confidence            5799999999999999999998877754  577766532  23445677899999888 45     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNN--------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE  234 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  234 (432)
                      .+|+||||+ +++|.+++....              ...+++..++.++.||+.||+|||++||+||||||+|||++.+ 
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~-  160 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN-  160 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC-
Confidence            999999999 899999997643              1247899999999999999999999999999999999996544 


Q ss_pred             ccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhCCCCCccchHHHHHHHHH
Q 047395          235 YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI  312 (432)
Q Consensus       235 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~  312 (432)
                                                +.++|+|||++.......  ....++..|+|||++.+..++.++|||||||++|
T Consensus       161 --------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  214 (303)
T cd05088         161 --------------------------YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW  214 (303)
T ss_pred             --------------------------CcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHH
Confidence                                      456666666654322111  1122356799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcc
Q 047395          313 ELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD  391 (432)
Q Consensus       313 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (432)
                      +|+| |..||...+..+....+....                        .                        .....
T Consensus       215 ellt~g~~p~~~~~~~~~~~~~~~~~------------------------~------------------------~~~~~  246 (303)
T cd05088         215 EIVSLGGTPYCGMTCAELYEKLPQGY------------------------R------------------------LEKPL  246 (303)
T ss_pred             HHHhcCCCCcccCChHHHHHHHhcCC------------------------c------------------------CCCCC
Confidence            9998 999997665544332221100                        0                        00011


Q ss_pred             cchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      ..+..+.+||.+||+.||++||++++++.+
T Consensus       247 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         247 NCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            245568899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=1.2e-40  Score=306.35  Aligned_cols=249  Identities=29%  Similarity=0.537  Sum_probs=202.7

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.+.||.|+||.||+|.+..+++.||+|++....   .....+..|+++++.++|     +|++++.+.+......+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~~~~~~~~~~~~~~~~   75 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNH-----PNIIKYYESFEEKGKLC   75 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCC-----CChhheEEEEecCCEEE
Confidence            5899999999999999999999999999999987432   345667889999988886     99999999998889999


Q ss_pred             EEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          173 IVFEML-GPSLYDFLRKNN--YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+|++ +++|.+++....  ...+++..+..++.|++.||.|||++|++|+||+|+||+++.+                
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~----------------  139 (258)
T cd08215          76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSN----------------  139 (258)
T ss_pred             EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCC----------------
Confidence            999999 889999998752  2469999999999999999999999999999999999997654                


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                 +.++|+|||.+......   .....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+.
T Consensus       140 -----------~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~  208 (258)
T cd08215         140 -----------GLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL  208 (258)
T ss_pred             -----------CcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH
Confidence                       45666666655443222   2234678899999999988899999999999999999999999976654


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      ......+....  .+                                              .....++..+.++|.+||.
T Consensus       209 ~~~~~~~~~~~--~~----------------------------------------------~~~~~~~~~~~~~i~~~l~  240 (258)
T cd08215         209 LELALKILKGQ--YP----------------------------------------------PIPSQYSSELRNLVSSLLQ  240 (258)
T ss_pred             HHHHHHHhcCC--CC----------------------------------------------CCCCCCCHHHHHHHHHHcC
Confidence            33322221110  00                                              0011345668899999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 047395          407 YDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f  424 (432)
                      .||++|||+.++|+||||
T Consensus       241 ~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         241 KDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CChhhCcCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=4.3e-41  Score=315.68  Aligned_cols=252  Identities=27%  Similarity=0.451  Sum_probs=200.5

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      |....+||+|+||.||++....+++.||||.+... ......+.+|+.++..+.|     +|++++++.+...+..++||
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~~~~~lv~   96 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH-----ENVVEMYNSYLVGDELWVVM   96 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCC-----cchhheeeEEEeCCEEEEEE
Confidence            44457899999999999999999999999988532 2344567889988888876     99999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          176 EML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ||+ +++|.+++...   .+++..+..++.|++.||+|||++||+|+||||+||+++.++                    
T Consensus        97 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~--------------------  153 (292)
T cd06657          97 EFLEGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDG--------------------  153 (292)
T ss_pred             ecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--------------------
Confidence            999 88999987653   489999999999999999999999999999999999976544                    


Q ss_pred             ccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA  331 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~  331 (432)
                             .++|+|||++.....   ......|+..|+|||.+.+..++.++|+|||||++|+|++|..||.+....+...
T Consensus       154 -------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~  226 (292)
T cd06657         154 -------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK  226 (292)
T ss_pred             -------CEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                   455556655433221   1223467889999999988888999999999999999999999998765554433


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+.......                                              ......++..+.++|.+||+.||.+
T Consensus       227 ~~~~~~~~~----------------------------------------------~~~~~~~~~~l~~li~~~l~~~P~~  260 (292)
T cd06657         227 MIRDNLPPK----------------------------------------------LKNLHKVSPSLKGFLDRLLVRDPAQ  260 (292)
T ss_pred             HHHhhCCcc----------------------------------------------cCCcccCCHHHHHHHHHHHhCCccc
Confidence            332211100                                              0001234556889999999999999


Q ss_pred             CCCHHHHhcCCCCCCCcc
Q 047395          412 RLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       412 R~ta~elL~hp~f~~~~~  429 (432)
                      ||++.++++||||.....
T Consensus       261 R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         261 RATAAELLKHPFLAKAGP  278 (292)
T ss_pred             CcCHHHHhcChHHhccCC
Confidence            999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=6.4e-41  Score=307.75  Aligned_cols=239  Identities=22%  Similarity=0.354  Sum_probs=187.0

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      +.||+|+||.||+|.+..+++.||+|.+...  ......+.+|+++++.+.|     +||+++++++......++||||+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~lv~e~~   75 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSH-----PNIVRLIGVCTQKQPIYIVMELV   75 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCC-----CCcceEEEEEcCCCCeEEEEeec
Confidence            4699999999999999999999999987632  3345678889999998876     99999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccC
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL  257 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  257 (432)
                       +++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.                      
T Consensus        76 ~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~----------------------  132 (252)
T cd05084          76 QGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNV----------------------  132 (252)
T ss_pred             cCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCc----------------------
Confidence             899999997654 35899999999999999999999999999999999999765554                      


Q ss_pred             CCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHH
Q 047395          258 PKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLA  331 (432)
Q Consensus       258 ~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~  331 (432)
                           ++|+|||.+.......     .....+..|+|||.+.+..++.++|||||||++|+|++ |..||..........
T Consensus       133 -----~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~  207 (252)
T cd05084         133 -----LKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE  207 (252)
T ss_pred             -----EEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH
Confidence                 4555555443322111     01122456999999998889999999999999999998 999997655433222


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+..... .                                               .....++..+.+|+.+||+.||++
T Consensus       208 ~~~~~~~-~-----------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~  239 (252)
T cd05084         208 AIEQGVR-L-----------------------------------------------PCPELCPDAVYRLMERCWEYDPGQ  239 (252)
T ss_pred             HHHcCCC-C-----------------------------------------------CCcccCCHHHHHHHHHHcCCChhh
Confidence            2211000 0                                               011234556889999999999999


Q ss_pred             CCCHHHHhc
Q 047395          412 RLTAHDALK  420 (432)
Q Consensus       412 R~ta~elL~  420 (432)
                      |||+.++++
T Consensus       240 Rps~~~~~~  248 (252)
T cd05084         240 RPSFSTVHQ  248 (252)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=1.1e-40  Score=312.61  Aligned_cols=246  Identities=21%  Similarity=0.318  Sum_probs=193.6

Q ss_pred             CceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+|.+.+.||+|+||.||++.+.     .++..+|+|.++.. ......+.+|+.++..+.|     ++++++++++...
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~   79 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH-----EHIVKFYGVCVEG   79 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCC-----CCcceEEEEEecC
Confidence            46999999999999999999853     34567999998643 3345568889999998877     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcc
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNY-----------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYL  236 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~-----------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  236 (432)
                      +..++||||+ +++|.+++.....           ..+++..+..++.||+.||+|||++||+||||||+|||++.++  
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~--  157 (288)
T cd05093          80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL--  157 (288)
T ss_pred             CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC--
Confidence            9999999999 8999999975431           2489999999999999999999999999999999999976544  


Q ss_pred             ccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHH
Q 047395          237 KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL  311 (432)
Q Consensus       237 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil  311 (432)
                                               .++|+|||++......     .....++..|+|||++.+..++.++|||||||++
T Consensus       158 -------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il  212 (288)
T cd05093         158 -------------------------LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL  212 (288)
T ss_pred             -------------------------cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHH
Confidence                                     4555555555432211     1223457789999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhc
Q 047395          312 IELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV  390 (432)
Q Consensus       312 ~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (432)
                      |+|++ |..||......+....+....  .+                                              ...
T Consensus       213 ~~l~t~g~~p~~~~~~~~~~~~i~~~~--~~----------------------------------------------~~~  244 (288)
T cd05093         213 WEIFTYGKQPWYQLSNNEVIECITQGR--VL----------------------------------------------QRP  244 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCC--cC----------------------------------------------CCC
Confidence            99998 999998766544433332110  00                                              001


Q ss_pred             ccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       391 ~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      ...+..+.+|+.+||+.||.+|||+.++++
T Consensus       245 ~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         245 RTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            234556899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=8.7e-41  Score=325.47  Aligned_cols=248  Identities=20%  Similarity=0.265  Sum_probs=191.8

Q ss_pred             cCceEEEeeeecccceEEEEEEecCC-----CcEEEEEEeech--hhhhHhHHHHHHHHHHHH-hcCCCCCceeEeeccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRET-----GETVAIKVVRSI--KKYREAAMTEIDVLELLK-RYDRSGSRCVQIRNWF  165 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~-----~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~-~~~~~~~~iv~~~~~~  165 (432)
                      .++|++++.||+|+||.||+|.+...     +..||||+++..  ....+.+.+|+.++..+. |     |||+++++++
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~H-----pnIv~l~~~~  110 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPH-----LNIVNLLGAC  110 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCC-----CCeeeEEEEE
Confidence            46899999999999999999987533     347999999643  233467889999999885 5     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC------------------------------------------------------
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNN------------------------------------------------------  190 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~------------------------------------------------------  190 (432)
                      ...+.+|+||||| +|+|.+++..+.                                                      
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (400)
T cd05105         111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP  190 (400)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence            9999999999999 999999987532                                                      


Q ss_pred             ----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEe
Q 047395          191 ----------------------------------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF  230 (432)
Q Consensus       191 ----------------------------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  230 (432)
                                                              ...+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill  270 (400)
T cd05105         191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL  270 (400)
T ss_pred             hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE
Confidence                                                    1247788889999999999999999999999999999997


Q ss_pred             ecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHH
Q 047395          231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMW  305 (432)
Q Consensus       231 ~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiw  305 (432)
                      +.+                           ..+||+|||++......     .....++..|+|||++.+..++.++|||
T Consensus       271 ~~~---------------------------~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  323 (400)
T cd05105         271 AQG---------------------------KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVW  323 (400)
T ss_pred             eCC---------------------------CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHH
Confidence            553                           45667777766543221     1223467789999999998899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhh
Q 047395          306 SVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN  384 (432)
Q Consensus       306 SlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (432)
                      ||||++|||++ |..||..................                                             
T Consensus       324 SlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~---------------------------------------------  358 (400)
T cd05105         324 SYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYR---------------------------------------------  358 (400)
T ss_pred             HHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCC---------------------------------------------
Confidence            99999999997 99999764332221111000000                                             


Q ss_pred             hhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       385 ~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                        ......++..+.++|.+||+.||++|||+.++.+
T Consensus       359 --~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         359 --MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             --CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence              0011244566889999999999999999988865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=2.5e-40  Score=304.37  Aligned_cols=249  Identities=31%  Similarity=0.473  Sum_probs=202.6

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC--Ce
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR--NH  170 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~--~~  170 (432)
                      +|++.+.||+|++|.||+|.+..+++.|++|++....   ...+.+.+|+.+++.+.|     +||+++++.+...  ..
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~   75 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH-----PNIVRYYGSERDEEKNT   75 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCC-----CCEeeEEEEEecCCCCe
Confidence            4888999999999999999999999999999987544   346678889999999886     9999999999888  89


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .++|+||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++|+||+|+||+++.                 
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~-----------------  136 (260)
T cd06606          76 LNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS-----------------  136 (260)
T ss_pred             EEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC-----------------
Confidence            99999999 999999998765  7999999999999999999999999999999999999754                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                ++.++|+|||.+......     .....++..|+|||.+.+...+.++||||||+++|+|++|..||...
T Consensus       137 ----------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  206 (260)
T cd06606         137 ----------DGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSEL  206 (260)
T ss_pred             ----------CCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                      445666666665543332     23356788999999999888999999999999999999999999876


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      .....  .+......                                            ......+...+..+.++|.+|
T Consensus       207 ~~~~~--~~~~~~~~--------------------------------------------~~~~~~~~~~~~~l~~~i~~~  240 (260)
T cd06606         207 GNPMA--ALYKIGSS--------------------------------------------GEPPEIPEHLSEEAKDFLRKC  240 (260)
T ss_pred             CchHH--HHHhcccc--------------------------------------------CCCcCCCcccCHHHHHHHHHh
Confidence            52111  11111000                                            000011123456689999999


Q ss_pred             cccCCCCCCCHHHHhcCCCC
Q 047395          405 LRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f  424 (432)
                      |+.||++||++.|+++||||
T Consensus       241 l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         241 LRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             CcCChhhCCCHHHHhhCCCC
Confidence            99999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=1.9e-40  Score=315.21  Aligned_cols=254  Identities=27%  Similarity=0.410  Sum_probs=202.3

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ....|+..+.||+|+||.||+|++..++..||+|++....    .....+..|+.+++.+.|     +|++++++++...
T Consensus        23 ~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~   97 (317)
T cd06635          23 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKH-----PNSIEYKGCYLRE   97 (317)
T ss_pred             chhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCC-----CCEEEEEEEEeeC
Confidence            3455889999999999999999999999999999986422    223457788888888877     9999999999999


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          169 NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       169 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ...++||||+.++|.+++.... .++++..+..++.||+.||.|||++||+||||+|+||+++.                
T Consensus        98 ~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~----------------  160 (317)
T cd06635          98 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE----------------  160 (317)
T ss_pred             CeEEEEEeCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECC----------------
Confidence            9999999999778888886543 46899999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHh---CCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                 ++.++|+|||++..... .....|+..|+|||++.   ...++.++|||||||++|+|++|..||...+
T Consensus       161 -----------~~~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~  228 (317)
T cd06635         161 -----------PGQVKLADFGSASIASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  228 (317)
T ss_pred             -----------CCCEEEecCCCccccCC-cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence                       44567777776554322 23346888999999984   3457899999999999999999999997765


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .......+.....+..                                               ....++..+.+||.+||
T Consensus       229 ~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~l~~li~~~l  261 (317)
T cd06635         229 AMSALYHIAQNESPTL-----------------------------------------------QSNEWSDYFRNFVDSCL  261 (317)
T ss_pred             HHHHHHHHHhccCCCC-----------------------------------------------CCccccHHHHHHHHHHc
Confidence            4443333322111000                                               01234556889999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +.+|.+||++.++++|+|+...
T Consensus       262 ~~~p~~Rpt~~~il~~~~~~~~  283 (317)
T cd06635         262 QKIPQDRPTSEELLKHMFVLRE  283 (317)
T ss_pred             cCCcccCcCHHHHHhChhhhcc
Confidence            9999999999999999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=6.7e-41  Score=318.12  Aligned_cols=245  Identities=20%  Similarity=0.310  Sum_probs=190.8

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcE----EEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGET----VAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~----vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+|++.+.||+|+||.||+|++..++..    ||+|+++..  ......+..|+.+++.+.|     +||+++++++...
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~niv~~~g~~~~~   81 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN-----PHVCRLLGICLTS   81 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCC-----CCCCeEEEEEcCC
Confidence            5799999999999999999998766654    899998642  2345667889999988877     9999999988764


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                       ..++|+||+ +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++             
T Consensus        82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~-------------  146 (316)
T cd05108          82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQ-------------  146 (316)
T ss_pred             -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCC-------------
Confidence             467899999 999999998754 3588999999999999999999999999999999999975544             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCcc-----ccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN-----YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALF  321 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf  321 (432)
                                    .+||+|||++........     ...++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus       147 --------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~  212 (316)
T cd05108         147 --------------HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY  212 (316)
T ss_pred             --------------cEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence                          456666666554322111     1224667999999999899999999999999999998 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+....+....+.. ...+|                                               ....++..+.++|
T Consensus       213 ~~~~~~~~~~~~~~-~~~~~-----------------------------------------------~~~~~~~~~~~li  244 (316)
T cd05108         213 DGIPASEISSILEK-GERLP-----------------------------------------------QPPICTIDVYMIM  244 (316)
T ss_pred             CCCCHHHHHHHHhC-CCCCC-----------------------------------------------CCCCCCHHHHHHH
Confidence            87654433221111 00000                                               0122345578999


Q ss_pred             HHccccCCCCCCCHHHHhcC
Q 047395          402 QGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~h  421 (432)
                      .+||..||++|||+.+++.+
T Consensus       245 ~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         245 VKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHccCChhhCcCHHHHHHH
Confidence            99999999999999999975

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1.3e-40  Score=306.43  Aligned_cols=243  Identities=24%  Similarity=0.361  Sum_probs=193.3

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc-ccCCeEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF-DYRNHICI  173 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~-~~~~~~~l  173 (432)
                      .+|++.+.||+|+||.||++...  +..||+|.++... ..+.+.+|+.+++.+.|     ++++++++++ ..++..++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~~l   77 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRH-----SNLVQLLGVIVEEKGGLYI   77 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCC-----CCeeeEEEEEEcCCCceEE
Confidence            47999999999999999999754  7889999986533 34567889999998877     9999999864 45678999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.                    
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~--------------------  137 (256)
T cd05082          78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSE--------------------  137 (256)
T ss_pred             EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcC--------------------
Confidence            99999 889999998765445899999999999999999999999999999999999654                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLA  331 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~  331 (432)
                             ++.+||+|||++...........++..|+|||++.+..++.++|||||||++|+|++ |+.||...+..+...
T Consensus       138 -------~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~  210 (256)
T cd05082         138 -------DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP  210 (256)
T ss_pred             -------CCcEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence                   445666777766544333333445668999999998889999999999999999998 999997655433332


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+.....                                                ....+.++..+.++|.+||+.||++
T Consensus       211 ~~~~~~~------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~  242 (256)
T cd05082         211 RVEKGYK------------------------------------------------MDAPDGCPPVVYDVMKQCWHLDAAT  242 (256)
T ss_pred             HHhcCCC------------------------------------------------CCCCCCCCHHHHHHHHHHhcCChhh
Confidence            2211100                                                0011245666889999999999999


Q ss_pred             CCCHHHHhc
Q 047395          412 RLTAHDALK  420 (432)
Q Consensus       412 R~ta~elL~  420 (432)
                      |||+.++++
T Consensus       243 Rpt~~~l~~  251 (256)
T cd05082         243 RPSFLQLRE  251 (256)
T ss_pred             CcCHHHHHH
Confidence            999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.1e-40  Score=311.77  Aligned_cols=247  Identities=21%  Similarity=0.306  Sum_probs=193.8

Q ss_pred             CceEEEeeeecccceEEEEEEec----CCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDR----ETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ++|++.+.||+|+||+||+|...    .+++.||+|.++...  .....+.+|+.+++.+.|     +||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~   79 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH-----PNIVCLLGVVTQE   79 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC-----CCeeeEEEEEecC
Confidence            56899999999999999999853    456789999986422  233567889999999877     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec
Q 047395          169 NHICIVFEML-GPSLYDFLRKNN---------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~---------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  232 (432)
                      ...|+||||+ +++|.+++....               ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~  159 (283)
T cd05090          80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE  159 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC
Confidence            9999999999 899999986432               124788899999999999999999999999999999999755


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHH
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSV  307 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSl  307 (432)
                      +                           ..++|+|||++......     .....++..|+|||++.+..++.++|||||
T Consensus       160 ~---------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl  212 (283)
T cd05090         160 Q---------------------------LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSF  212 (283)
T ss_pred             C---------------------------CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHH
Confidence            4                           45666666665443211     122345677999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhh
Q 047395          308 GCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV  386 (432)
Q Consensus       308 Gvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (432)
                      ||++|||++ |..||.+.+..+....+.... .+                                              
T Consensus       213 G~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~----------------------------------------------  245 (283)
T cd05090         213 GVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQ-LL----------------------------------------------  245 (283)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-cC----------------------------------------------
Confidence            999999998 999998766544333322110 00                                              


Q ss_pred             hhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       387 ~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                       .....+++.+.++|.+||+.||++||++.+++++
T Consensus       246 -~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         246 -PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             -CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence             0112345668899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.6e-40  Score=306.67  Aligned_cols=245  Identities=25%  Similarity=0.351  Sum_probs=193.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .++|++.++||+|+||.||+|.+..+ ..+|+|.+.......+.+.+|+.+++.+.|     +|++++++++. .+..++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~-~~~~~~   77 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRH-----DKLVPLYAVVS-EEPIYI   77 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCC-----CCeeeEEEEEc-CCCcEE
Confidence            46799999999999999999987654 469999887655555678889999998877     99999998875 456889


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++.......+++..+..++.||+.||.|||+.||+|+||||+||+++++                   
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~-------------------  138 (260)
T cd05069          78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDN-------------------  138 (260)
T ss_pred             EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCC-------------------
Confidence            99999 7899999987554458999999999999999999999999999999999996554                   


Q ss_pred             ccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                              +.++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....
T Consensus       139 --------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  210 (260)
T cd05069         139 --------LVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR  210 (260)
T ss_pred             --------CeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                    456666666654432211    12235678999999998889999999999999999999 99999876655


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+..... .                                               ......+..+.++|.+||+.
T Consensus       211 ~~~~~~~~~~~-~-----------------------------------------------~~~~~~~~~~~~li~~~l~~  242 (260)
T cd05069         211 EVLEQVERGYR-M-----------------------------------------------PCPQGCPESLHELMKLCWKK  242 (260)
T ss_pred             HHHHHHHcCCC-C-----------------------------------------------CCCcccCHHHHHHHHHHccC
Confidence            44433322100 0                                               00123455688999999999


Q ss_pred             CCCCCCCHHHHhc
Q 047395          408 DPSSRLTAHDALK  420 (432)
Q Consensus       408 dP~~R~ta~elL~  420 (432)
                      ||++||+++++++
T Consensus       243 ~p~~Rp~~~~i~~  255 (260)
T cd05069         243 DPDERPTFEYIQS  255 (260)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.5e-40  Score=305.96  Aligned_cols=245  Identities=23%  Similarity=0.331  Sum_probs=198.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .++|++.+.||.|+||.||+|...  |+.||+|.++........+.+|+.++..+.|     +|++++++++......++
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~~   77 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRH-----PNLVQLLGVVLQGNPLYI   77 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCC-----cceeeeEEEEcCCCCeEE
Confidence            357899999999999999999764  8899999997655556678889999999877     999999999998899999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.                    
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~--------------------  137 (256)
T cd05039          78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSE--------------------  137 (256)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeC--------------------
Confidence            99999 789999998765446899999999999999999999999999999999999654                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLA  331 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~  331 (432)
                             ++.++|+|||.+............+..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+...
T Consensus       138 -------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~  210 (256)
T cd05039         138 -------DLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP  210 (256)
T ss_pred             -------CCCEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence                   445666677666554333333344667999999988889999999999999999997 999997665443322


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+.....                                                ......+++.+.++|.+||..||++
T Consensus       211 ~~~~~~~------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~  242 (256)
T cd05039         211 HVEKGYR------------------------------------------------MEAPEGCPPEVYKVMKDCWELDPAK  242 (256)
T ss_pred             HHhcCCC------------------------------------------------CCCccCCCHHHHHHHHHHhccChhh
Confidence            2211000                                                0011234566889999999999999


Q ss_pred             CCCHHHHhc
Q 047395          412 RLTAHDALK  420 (432)
Q Consensus       412 R~ta~elL~  420 (432)
                      |||+.++++
T Consensus       243 Rp~~~~l~~  251 (256)
T cd05039         243 RPTFKQLRE  251 (256)
T ss_pred             CcCHHHHHH
Confidence            999999985

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=1.1e-40  Score=313.80  Aligned_cols=248  Identities=22%  Similarity=0.289  Sum_probs=192.0

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCc--EEEEEEeec--hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGE--TVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~--~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||.||+|++..++.  .+++|.++.  .......+.+|+.++..+.+    |+||+++++++...+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~----hp~iv~~~~~~~~~~~   77 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGH----HPNIINLLGACENRGY   77 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcC----CCchhheEEEEccCCc
Confidence            579999999999999999999877664  478888763  22334567889999888842    3999999999998899


Q ss_pred             EEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCc
Q 047395          171 ICIVFEML-GPSLYDFLRKNNY--------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEY  235 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~  235 (432)
                      +|+||||+ +++|.+++.....              ..+++..++.++.||+.||+|||++||+||||||+|||++.+  
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~--  155 (297)
T cd05089          78 LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN--  155 (297)
T ss_pred             ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC--
Confidence            99999999 8999999976421              248889999999999999999999999999999999997554  


Q ss_pred             cccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccc--cccCCCcchhHHHhCCCCCccchHHHHHHHHHH
Q 047395          236 LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE  313 (432)
Q Consensus       236 ~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~e  313 (432)
                                               ..+||+|||++.........  ...+..|+|||++.+..++.++|||||||++||
T Consensus       156 -------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~e  210 (297)
T cd05089         156 -------------------------LASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWE  210 (297)
T ss_pred             -------------------------CeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHH
Confidence                                     44566666655432211111  123456999999998889999999999999999


Q ss_pred             HHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhccc
Q 047395          314 LCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH  392 (432)
Q Consensus       314 llt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (432)
                      |++ |..||......+....+.....                                                ......
T Consensus       211 l~t~g~~pf~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~  242 (297)
T cd05089         211 IVSLGGTPYCGMTCAELYEKLPQGYR------------------------------------------------MEKPRN  242 (297)
T ss_pred             HHcCCCCCCCCCCHHHHHHHHhcCCC------------------------------------------------CCCCCC
Confidence            997 9999987665443332211100                                                001123


Q ss_pred             chHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          393 SAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       393 ~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      ++..+.+||.+||+.||.+|||++++++.
T Consensus       243 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         243 CDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            55668899999999999999999999653

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=2e-40  Score=307.16  Aligned_cols=247  Identities=26%  Similarity=0.386  Sum_probs=194.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeec----hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||.||+|++..+++.||||.++.    .......+.+|+.+++.++|     +|++++++++...+.
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~   76 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH-----PNVIKYLDSFIEDNE   76 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCC-----cceeeeeeeEEECCe
Confidence            579999999999999999999999999999998753    22334567789999998877     999999999998999


Q ss_pred             EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          171 ICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      .++|+||+ +++|.+++...  ....+++..+..++.||+.||.|||++||+|+||||+||+++.+              
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~--------------  142 (267)
T cd08228          77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITAT--------------  142 (267)
T ss_pred             EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCC--------------
Confidence            99999999 88999988642  22358999999999999999999999999999999999997554              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                   +.++|+|||.+.......   ....|++.|+|||.+.+..++.++||||||+++|+|++|..||...
T Consensus       143 -------------~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~  209 (267)
T cd08228         143 -------------GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             -------------CCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence                         446666666555432211   2346788999999999888999999999999999999999999654


Q ss_pred             CcH--HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          325 ENL--EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       325 ~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ...  .....+ ...+..+                                              ......+..+.++|.
T Consensus       210 ~~~~~~~~~~~-~~~~~~~----------------------------------------------~~~~~~~~~~~~li~  242 (267)
T cd08228         210 KMNLFSLCQKI-EQCDYPP----------------------------------------------LPTEHYSEKLRELVS  242 (267)
T ss_pred             cccHHHHHHHH-hcCCCCC----------------------------------------------CChhhcCHHHHHHHH
Confidence            321  111111 1000000                                              001134456889999


Q ss_pred             HccccCCCCCCCHHHHhc
Q 047395          403 GLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~  420 (432)
                      +||+.+|++|||+.++++
T Consensus       243 ~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         243 MCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             HHCCCCcccCcCHHHHHH
Confidence            999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-40  Score=306.18  Aligned_cols=247  Identities=25%  Similarity=0.324  Sum_probs=198.3

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ..++|++.++||.|+||.||+|.+. .++.||||.+.........+.+|+.+++.+.|     +|++++++++......+
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~   77 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRH-----DKLVQLYAVCSEEEPIY   77 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCC-----CCEeeeeeeeecCCceE
Confidence            3578999999999999999999875 45789999997655556678899999999877     99999999999888999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++                 
T Consensus        78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~-----------------  140 (261)
T cd05034          78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENL-----------------  140 (261)
T ss_pred             EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCC-----------------
Confidence            999999 89999999876545689999999999999999999999999999999999976544                 


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCc
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHEN  326 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~  326 (432)
                                .++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |+.||.+.+.
T Consensus       141 ----------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~  210 (261)
T cd05034         141 ----------VCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN  210 (261)
T ss_pred             ----------CEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence                      45566666554332111    11224567999999998889999999999999999998 9999987665


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      ......+......                                                ......+..+.+++.+||+
T Consensus       211 ~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~i~~~l~  242 (261)
T cd05034         211 REVLEQVERGYRM------------------------------------------------PRPPNCPEELYDLMLQCWD  242 (261)
T ss_pred             HHHHHHHHcCCCC------------------------------------------------CCCCCCCHHHHHHHHHHcc
Confidence            5544443221110                                                0011234558899999999


Q ss_pred             cCCCCCCCHHHHhc
Q 047395          407 YDPSSRLTAHDALK  420 (432)
Q Consensus       407 ~dP~~R~ta~elL~  420 (432)
                      .||++||+++++++
T Consensus       243 ~~p~~Rp~~~~l~~  256 (261)
T cd05034         243 KDPEERPTFEYLQS  256 (261)
T ss_pred             cCcccCCCHHHHHH
Confidence            99999999999873

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=3.6e-41  Score=311.06  Aligned_cols=246  Identities=22%  Similarity=0.323  Sum_probs=198.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh-hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ..+|++.++||.|+||.||+|.+.. ++.+|+|++..... ....+..|+.+++.++|     +|++++++++......+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~   78 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRH-----KHLISLFAVCSVGEPVY   78 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCC-----cchhheeeeEecCCCeE
Confidence            4569999999999999999999887 88999999875443 45678889999888876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.                
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~----------------  142 (261)
T cd05148          79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLV----------------  142 (261)
T ss_pred             EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCce----------------
Confidence            999999 889999998765557899999999999999999999999999999999999765544                


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                                 ++|+|||.+.......   ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..
T Consensus       143 -----------~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~  211 (261)
T cd05148         143 -----------CKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH  211 (261)
T ss_pred             -----------EEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence                       5555555544322111   12234667999999998889999999999999999998 89999876655


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+......                                                .....+++.+.++|.+||+.
T Consensus       212 ~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~i~~~l~~  243 (261)
T cd05148         212 EVYDQITAGYRM------------------------------------------------PCPAKCPQEIYKIMLECWAA  243 (261)
T ss_pred             HHHHHHHhCCcC------------------------------------------------CCCCCCCHHHHHHHHHHcCC
Confidence            544443221100                                                01124556688999999999


Q ss_pred             CCCCCCCHHHHhc
Q 047395          408 DPSSRLTAHDALK  420 (432)
Q Consensus       408 dP~~R~ta~elL~  420 (432)
                      ||.+|||+.++++
T Consensus       244 ~p~~Rpt~~~l~~  256 (261)
T cd05148         244 EPEDRPSFKALRE  256 (261)
T ss_pred             CchhCcCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=2e-40  Score=312.76  Aligned_cols=248  Identities=21%  Similarity=0.347  Sum_probs=193.5

Q ss_pred             cCceEEEeeeecccceEEEEEEe-----cCCCcEEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeeccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLD-----RETGETVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~-----~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~  165 (432)
                      .++|++.+.||+|+||.||+|.+     ..++..||+|+++..  ....+.+.+|+.+++.+ .|     +||+++++++
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~~iv~~~~~~  108 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNH-----ENIVNLLGAC  108 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCC-----CCcceEEEEE
Confidence            46899999999999999999975     234568999998643  23345688899999988 45     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ...+..|+||||+ +++|.+++.......+++.++..++.||+.||.|||+++|+|+||||+|||++.++          
T Consensus       109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~----------  178 (302)
T cd05055         109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK----------  178 (302)
T ss_pred             ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCC----------
Confidence            9999999999999 89999999875434589999999999999999999999999999999999976544          


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GE  318 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~  318 (432)
                                       .++|+|||++.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       179 -----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~  241 (302)
T cd05055         179 -----------------IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGS  241 (302)
T ss_pred             -----------------eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCC
Confidence                             45555555554322111     12245678999999998889999999999999999998 99


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||......+...........                                               .......+..+.
T Consensus       242 ~p~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~  274 (302)
T cd05055         242 NPYPGMPVDSKFYKLIKEGYR-----------------------------------------------MAQPEHAPAEIY  274 (302)
T ss_pred             CCcCCCCchHHHHHHHHcCCc-----------------------------------------------CCCCCCCCHHHH
Confidence            999765543322211110000                                               000123355688


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~  420 (432)
                      +||.+||..+|++|||+.|+++
T Consensus       275 ~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         275 DIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HHHHHHcCCCchhCcCHHHHHH
Confidence            9999999999999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.1e-40  Score=304.64  Aligned_cols=248  Identities=27%  Similarity=0.434  Sum_probs=195.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech------hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI------KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-  167 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-  167 (432)
                      .+|++.+.||+|+||.||+|.+..+++.||+|.+...      ......+.+|+.+++.++|     +||+++++++.. 
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h-----~~i~~~~~~~~~~   76 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRH-----DRIVQYYGCLRDP   76 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCC-----CCcceEEEEEEcC
Confidence            4699999999999999999999999999999987421      2233567789999999987     999999998765 


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          168 -RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       168 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                       .+.+++|+||+ +++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+||+++.++.+         
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~---------  145 (264)
T cd06653          77 EEKKLSIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNV---------  145 (264)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCE---------
Confidence             35689999999 899999998754  58999999999999999999999999999999999997665544         


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC------CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ------EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                        +|+|||++.....      ......|+..|+|||++.+..++.++|||||||++|+|++|..
T Consensus       146 ------------------~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  207 (264)
T cd06653         146 ------------------KLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKP  207 (264)
T ss_pred             ------------------EECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence                              4555554432211      1123467889999999998888999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||...........+   .....                                            ....++..++.+.+
T Consensus       208 p~~~~~~~~~~~~~---~~~~~--------------------------------------------~~~~p~~~~~~~~~  240 (264)
T cd06653         208 PWAEYEAMAAIFKI---ATQPT--------------------------------------------KPMLPDGVSDACRD  240 (264)
T ss_pred             CCCccCHHHHHHHH---HcCCC--------------------------------------------CCCCCcccCHHHHH
Confidence            99765443322221   11000                                            00112345667899


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      +|.+||+ +|.+|||+.++++|||.
T Consensus       241 ~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         241 FLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHHhc-CcccCccHHHHhcCCCC
Confidence            9999999 57999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=1.2e-40  Score=315.29  Aligned_cols=254  Identities=28%  Similarity=0.410  Sum_probs=200.4

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ....|+..+.||.|+||.||+|++..+++.||+|.+...    ......+.+|+++++.+.|     +|++++++++...
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~   87 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH-----PNTIQYRGCYLRE   87 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCC-----CCcccEEEEEEcC
Confidence            456688899999999999999999999999999998632    2233456788888888876     9999999999999


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          169 NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       169 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ...++||||+.++|.+++.... ..+++..+..++.|++.||.|||+++++||||||+||+++.+               
T Consensus        88 ~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~---------------  151 (308)
T cd06634          88 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP---------------  151 (308)
T ss_pred             CeeEEEEEccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCC---------------
Confidence            9999999999778988876544 468999999999999999999999999999999999997544               


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC---CCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                  +.++|+|||++..... .....++..|+|||.+.+   ..++.++|||||||++|+|++|..||...+
T Consensus       152 ------------~~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  218 (308)
T cd06634         152 ------------GLVKLGDFGSASIMAP-ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  218 (308)
T ss_pred             ------------CcEEECCcccceeecC-cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc
Confidence                        4566666666544332 233467889999999853   457889999999999999999999997654


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....+....  .+.                                             .....++..+.+||.+||
T Consensus       219 ~~~~~~~~~~~~--~~~---------------------------------------------~~~~~~~~~~~~li~~cl  251 (308)
T cd06634         219 AMSALYHIAQNE--SPA---------------------------------------------LQSGHWSEYFRNFVDSCL  251 (308)
T ss_pred             HHHHHHHHhhcC--CCC---------------------------------------------cCcccccHHHHHHHHHHh
Confidence            433322221110  000                                             001234556889999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +.+|++||+++++++|||+...
T Consensus       252 ~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         252 QKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             hCCcccCCCHHHHhhCcccccc
Confidence            9999999999999999999764

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=2e-40  Score=306.98  Aligned_cols=246  Identities=24%  Similarity=0.322  Sum_probs=193.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCC---CcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRET---GETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~---~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ++|++.+.||+|+||.||+|.+..+   ...||||+++..  ......+.+|+.++..++|     +||+++++++...+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~   78 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDH-----PNIIRLEGVVTKSR   78 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCC-----CCcceEeEEEecCC
Confidence            5799999999999999999988644   458999998643  2334567889999988877     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ..++||||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+|||++.++.             
T Consensus        79 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~-------------  144 (266)
T cd05033          79 PVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLV-------------  144 (266)
T ss_pred             ceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCC-------------
Confidence            999999999 899999998754 36899999999999999999999999999999999999766554             


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQ  322 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~  322 (432)
                                    ++|+|||++.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus       145 --------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~  210 (266)
T cd05033         145 --------------CKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYW  210 (266)
T ss_pred             --------------EEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCC
Confidence                          4555555444332110     11234578999999998889999999999999999998 999997


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      .....+....+..... .+                                               ....++..+.+|+.
T Consensus       211 ~~~~~~~~~~~~~~~~-~~-----------------------------------------------~~~~~~~~l~~li~  242 (266)
T cd05033         211 DMSNQDVIKAVEDGYR-LP-----------------------------------------------PPMDCPSALYQLML  242 (266)
T ss_pred             CCCHHHHHHHHHcCCC-CC-----------------------------------------------CCCCCCHHHHHHHH
Confidence            6555443333321100 00                                               01234566889999


Q ss_pred             HccccCCCCCCCHHHHhcC
Q 047395          403 GLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~h  421 (432)
                      +||+.||++||++.+++++
T Consensus       243 ~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         243 DCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHcCCCcccCcCHHHHHHH
Confidence            9999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.5e-40  Score=308.17  Aligned_cols=247  Identities=21%  Similarity=0.357  Sum_probs=193.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCC-----CcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRET-----GETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .++|++.+.||+|+||.||+|.+...     +..||+|.+....  .....+.+|+.++..+.|     +||+++++++.
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~   79 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNC-----HHVVRLLGVVS   79 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCC-----CceeEEEEEEc
Confidence            46899999999999999999987643     4789999986432  334467788888888776     99999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNN--------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLK  237 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  237 (432)
                      .....++||||+ +++|.+++....        ...+++..+..++.||+.||.|||++||+||||||+|||++.++   
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~---  156 (277)
T cd05032          80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDL---  156 (277)
T ss_pred             CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCC---
Confidence            999999999999 899999997532        12367889999999999999999999999999999999976544   


Q ss_pred             cCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHH
Q 047395          238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI  312 (432)
Q Consensus       238 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~  312 (432)
                                              .++|+|||++......     .....+|..|+|||.+.+..++.++|||||||++|
T Consensus       157 ------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  212 (277)
T cd05032         157 ------------------------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLW  212 (277)
T ss_pred             ------------------------CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHH
Confidence                                    4555555555432211     12234677899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcc
Q 047395          313 ELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD  391 (432)
Q Consensus       313 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (432)
                      ||++ |..||...+..+....+..  +..+                                              ..+.
T Consensus       213 el~t~g~~p~~~~~~~~~~~~~~~--~~~~----------------------------------------------~~~~  244 (277)
T cd05032         213 EMATLAEQPYQGLSNEEVLKFVID--GGHL----------------------------------------------DLPE  244 (277)
T ss_pred             HhhccCCCCCccCCHHHHHHHHhc--CCCC----------------------------------------------CCCC
Confidence            9998 9999987665444333221  0000                                              0112


Q ss_pred             cchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      .++..+.++|.+||+.+|++|||+.++++
T Consensus       245 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         245 NCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            34566889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=2.3e-40  Score=310.64  Aligned_cols=256  Identities=26%  Similarity=0.458  Sum_probs=198.8

Q ss_pred             ceEEEeeeecccceEEEEEEec---CCCcEEEEEEeechh-----hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           96 RYKILRKIGEGTFGQVLDCLDR---ETGETVAIKVVRSIK-----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .|++.+.||.|+||.||+|.+.   .+|+.||+|+++...     ...+.+.+|+.++..+.+    |++|+.+++.++.
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~----~~~i~~~~~~~~~   76 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ----SPFLVTLHYAFQT   76 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhccc----CCChhceeeEeec
Confidence            4889999999999999999875   478999999987432     234567789998888853    3999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      +..+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+|||++.              
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~--------------  140 (290)
T cd05613          77 DTKLHLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDS--------------  140 (290)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECC--------------
Confidence            99999999999 899999998754  6899999999999999999999999999999999999654              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCC--CCCccchHHHHHHHHHHHHhCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                   ++.++|+|||++......    .....|+..|+|||.+.+.  .++.++|||||||++|+|++|..|
T Consensus       141 -------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p  207 (290)
T cd05613         141 -------------NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASP  207 (290)
T ss_pred             -------------CCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCC
Confidence                         445666777665543221    1234688999999998753  467899999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...........+......                   ..                          ...++..+..+.++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~-------------------~~--------------------------~~~~~~~~~~~~~l  242 (290)
T cd05613         208 FTVDGEKNSQAEISRRILK-------------------SE--------------------------PPYPQEMSALAKDI  242 (290)
T ss_pred             CCcCCccccHHHHHHHhhc-------------------cC--------------------------CCCCccCCHHHHHH
Confidence            9643322111111111000                   00                          00112345568899


Q ss_pred             HHHccccCCCCCC-----CHHHHhcCCCCCCCcc
Q 047395          401 LQGLLRYDPSSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       401 i~~~L~~dP~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      |.+||+.||++||     +++++++||||+...+
T Consensus       243 l~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  276 (290)
T cd05613         243 IQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINW  276 (290)
T ss_pred             HHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCH
Confidence            9999999999997     8999999999988654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=2.3e-40  Score=311.02  Aligned_cols=248  Identities=21%  Similarity=0.342  Sum_probs=193.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCC-----CcEEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeeccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRET-----GETVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~-----~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~  165 (432)
                      .++|++.+.||+|+||.||++.+...     ...+|+|.+...  ......+.+|+.++..+ +|     +||+++++++
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~~i~~~~~~~   85 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-----KNIINLLGVC   85 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCC-----CCeeeEEEEE
Confidence            46899999999999999999987643     368999998643  23335577899988888 45     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEe
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKN--------------NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF  230 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  230 (432)
                      ...+.++++|||+ +++|.+++...              ....+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus        86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~  165 (293)
T cd05053          86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV  165 (293)
T ss_pred             cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence            9999999999999 99999999753              12468899999999999999999999999999999999997


Q ss_pred             ecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchHH
Q 047395          231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDMW  305 (432)
Q Consensus       231 ~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDiw  305 (432)
                      +.++                           .++|+|||.+.......     ....++..|+|||++.+..++.++|||
T Consensus       166 ~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  218 (293)
T cd05053         166 TEDH---------------------------VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVW  218 (293)
T ss_pred             cCCC---------------------------eEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCccccee
Confidence            6544                           45666666554332211     112345679999999988899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhh
Q 047395          306 SVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN  384 (432)
Q Consensus       306 SlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (432)
                      ||||++|||++ |..||......+....+.....                                              
T Consensus       219 slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~----------------------------------------------  252 (293)
T cd05053         219 SFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYR----------------------------------------------  252 (293)
T ss_pred             ehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc----------------------------------------------
Confidence            99999999998 9999987655443332211100                                              


Q ss_pred             hhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       385 ~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                        ...+...+..+.+|+.+||..||++|||+.|++++
T Consensus       253 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         253 --MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             --CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence              00112345568899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-42  Score=296.71  Aligned_cols=283  Identities=28%  Similarity=0.483  Sum_probs=229.3

Q ss_pred             EEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC-----C
Q 047395           98 KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR-----N  169 (432)
Q Consensus        98 ~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~-----~  169 (432)
                      +-.+.||.|+||.||-+.|..+|+.||+|.+...   -.....+.+|+++|..++|     .|++..+++.+-.     .
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkH-----dNVLSaLDILQPph~dfFq  130 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH-----DNVLSLLDILQPANPSFFQ  130 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhcc-----ccHHHHHHhcCCCCchHHH
Confidence            3456899999999999999999999999988642   2344667889999999988     8998888876643     3


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          170 HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       170 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .+|+++|++..+|..+|-...  .++.+.++.+++||+.||+|||+.||+||||||.|.|+++                 
T Consensus       131 EiYV~TELmQSDLHKIIVSPQ--~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS-----------------  191 (449)
T KOG0664|consen  131 ELYVLTELMQSDLHKIIVSPQ--ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS-----------------  191 (449)
T ss_pred             HHHHHHHHHHhhhhheeccCC--CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc-----------------
Confidence            578999999999999887654  6999999999999999999999999999999999999655                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                +..+||||||+++......    +..+-|.+|+|||+++|.. |+.+.||||.|||+.||+..+..|+..
T Consensus       192 ----------NCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq  261 (449)
T KOG0664|consen  192 ----------NCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAA  261 (449)
T ss_pred             ----------CceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhcc
Confidence                      4567777777777644332    2345688999999999874 899999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+++..|.+.+|.+..+..+...+.++..+.++...-|...-.       .+        ....+.-..+..+++.+|
T Consensus       262 ~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vL-------Yt--------lsS~~~~~heav~~~~~~  326 (449)
T KOG0664|consen  262 GPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRL-------YK--------IASPDDKNHEAVDLLQKL  326 (449)
T ss_pred             ChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccce-------ee--------ecCCcccchHHHHHHHHH
Confidence            999999999999999999888887777776666655444332110       00        011122334577999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          405 LRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      |.+||++|++..+++.|+++.+..+
T Consensus       327 l~~d~dkris~~~A~~~~~~~e~R~  351 (449)
T KOG0664|consen  327 LHFDPDKRISVEEALQHRYLEEGRL  351 (449)
T ss_pred             hCCCCcccccHhhhcccccccccce
Confidence            9999999999999999999877554

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=2e-40  Score=314.68  Aligned_cols=284  Identities=20%  Similarity=0.234  Sum_probs=195.1

Q ss_pred             cceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-CCCH
Q 047395          107 TFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSL  182 (432)
Q Consensus       107 ~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L  182 (432)
                      ++|.||++++..+++.||||+++..   ......+..|+.++..++|     +||+++++++...+..+++|||+ +++|
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h-----~~i~~~~~~~~~~~~~~~~~e~~~~~~l   86 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQH-----PNILPYVTSFIVDSELYVVSPLMAYGSC   86 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCC-----cchhhhhheeecCCeEEEEEeccCCCCH
Confidence            4455666666778999999998643   3344678889999999877     99999999999999999999999 8999


Q ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCC
Q 047395          183 YDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA  262 (432)
Q Consensus       183 ~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~  262 (432)
                      .+++.......+++..+..++.||+.||+|||+++|+||||||+||+++.++.++++||+.+......            
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~------------  154 (314)
T cd08216          87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKH------------  154 (314)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccc------------
Confidence            99998754456899999999999999999999999999999999999887776666666654321110            


Q ss_pred             eEEeecCCc-ccccCCccccccCCCcchhHHHhCC--CCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Q 047395          263 IKVIDFGST-AYEHQEHNYIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGP  339 (432)
Q Consensus       263 ~kl~Dfg~a-~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~  339 (432)
                            +.. ...........++..|+|||++.+.  .++.++|||||||++|+|++|..||..........  ....+.
T Consensus       155 ------~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~--~~~~~~  226 (314)
T cd08216         155 ------GKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLL--EKVRGT  226 (314)
T ss_pred             ------cccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHhcc
Confidence                  000 0001111234567889999999763  58899999999999999999999998765443221  222222


Q ss_pred             CCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHh
Q 047395          340 IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL  419 (432)
Q Consensus       340 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL  419 (432)
                      .+..+. ....+..    ..  ....   ..   ....................+..+.+||.+||+.||++|||++|+|
T Consensus       227 ~~~~~~-~~~~~~~----~~--~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll  293 (314)
T cd08216         227 VPCLLD-KSTYPLY----ED--SMSQ---SR---SSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLL  293 (314)
T ss_pred             Cccccc-cCchhhh----cC--CcCc---cc---ccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHh
Confidence            221100 0000000    00  0000   00   0000000000011111234566789999999999999999999999


Q ss_pred             cCCCCCCCc
Q 047395          420 KHPFFTRDY  428 (432)
Q Consensus       420 ~hp~f~~~~  428 (432)
                      +||||++..
T Consensus       294 ~~p~~~~~~  302 (314)
T cd08216         294 NHSFFKQCK  302 (314)
T ss_pred             cCchHhhhc
Confidence            999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-40  Score=302.96  Aligned_cols=239  Identities=31%  Similarity=0.526  Sum_probs=197.4

Q ss_pred             eecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       103 lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      ||.|+||.||++.+..+++.+|+|+++....    ....+..|+.+++.+.|     +|++++++.++.++..|+||||+
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~~v~e~~   75 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH-----PFIVKLHYAFQTEEKLYLVLEYA   75 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCC-----CcHHHHHHHeecCCeeEEEEecC
Confidence            6999999999999998899999999875332    34567889999888886     99999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccC
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL  257 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  257 (432)
                       +++|.+++....  .+++..+..++.||+.||.|||+.+++|+||+|+||+++.                         
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~-------------------------  128 (250)
T cd05123          76 PGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA-------------------------  128 (250)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcC-------------------------
Confidence             999999998764  5899999999999999999999999999999999999654                         


Q ss_pred             CCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 047395          258 PKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME  334 (432)
Q Consensus       258 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~  334 (432)
                        .+.++|+|||.+......   .....++..|+|||.+.+...+.++|+||||+++|+|++|..||...+.......+.
T Consensus       129 --~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~  206 (250)
T cd05123         129 --DGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKIL  206 (250)
T ss_pred             --CCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence              455777777776554332   334567889999999998888999999999999999999999997665533333222


Q ss_pred             HHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCC
Q 047395          335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLT  414 (432)
Q Consensus       335 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~t  414 (432)
                      ....                       .                          .+...+..+.++|++||..||++|||
T Consensus       207 ~~~~-----------------------~--------------------------~~~~~~~~l~~~i~~~l~~~p~~R~~  237 (250)
T cd05123         207 KDPL-----------------------R--------------------------FPEFLSPEARDLISGLLQKDPTKRLG  237 (250)
T ss_pred             cCCC-----------------------C--------------------------CCCCCCHHHHHHHHHHhcCCHhhCCC
Confidence            1000                       0                          11223556889999999999999999


Q ss_pred             H---HHHhcCCCC
Q 047395          415 A---HDALKHPFF  424 (432)
Q Consensus       415 a---~elL~hp~f  424 (432)
                      +   +++++||||
T Consensus       238 ~~~~~~l~~~~~f  250 (250)
T cd05123         238 SGGAEEIKAHPFF  250 (250)
T ss_pred             cccHHHHHhCCCC
Confidence            9   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=2.3e-40  Score=305.56  Aligned_cols=248  Identities=29%  Similarity=0.474  Sum_probs=196.2

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh------hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      +|.+.++||+|+||.||++.+..++..+++|+++...      .....+..|+.++..++|     +|++++++++....
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~   75 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH-----PAIVKFHASFLERD   75 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCC-----CcHHHHHHHHhcCC
Confidence            6899999999999999999998888888888776321      122345668888888776     99999999999889


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          170 HICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ..++||||+ +++|.+++...  ....+++..++.++.|++.||.|||++|++|+||||+||+++.              
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~--------------  141 (260)
T cd08222          76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN--------------  141 (260)
T ss_pred             ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec--------------
Confidence            999999999 89999988642  2246899999999999999999999999999999999999742              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                    +.++|+|||.+......   .....|++.|+|||.+.+..++.++|+||||+++|+|++|..||..
T Consensus       142 --------------~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~  207 (260)
T cd08222         142 --------------NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG  207 (260)
T ss_pred             --------------CCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                          23677777766543221   2234578899999999888889999999999999999999999976


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .........+..  +..+                                              .....++..+.++|.+
T Consensus       208 ~~~~~~~~~~~~--~~~~----------------------------------------------~~~~~~~~~~~~li~~  239 (260)
T cd08222         208 QNFLSVVLRIVE--GPTP----------------------------------------------SLPETYSRQLNSIMQS  239 (260)
T ss_pred             ccHHHHHHHHHc--CCCC----------------------------------------------CCcchhcHHHHHHHHH
Confidence            544332222211  1111                                              0012345568899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCC
Q 047395          404 LLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f  424 (432)
                      ||..||++||++.|+++||||
T Consensus       240 ~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         240 MLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HhcCChhhCcCHHHHhhCCCC
Confidence            999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=7.4e-41  Score=308.54  Aligned_cols=245  Identities=22%  Similarity=0.322  Sum_probs=191.2

Q ss_pred             eeeecccceEEEEEEecCCCc-------EEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395          101 RKIGEGTFGQVLDCLDRETGE-------TVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~-------~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +.||.|+||.||+|.+...+.       .+|+|.+.... ...+.+..|+.+++.+.|     +|++++++++..+...+
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h-----~~iv~~~~~~~~~~~~~   75 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSH-----KHLVLNYGVCVCGDESI   75 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCC-----CChhheeeEEEeCCCcE
Confidence            368999999999999865544       48888876432 334567788888888776     99999999999888999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++..++.++          
T Consensus        76 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~----------  144 (258)
T cd05078          76 MVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNP----------  144 (258)
T ss_pred             EEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCC----------
Confidence            999999 899999998754 35899999999999999999999999999999999999988776554443          


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhC-CCCCCCCCcHHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSG-EALFQTHENLEH  329 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg-~~pf~~~~~~~~  329 (432)
                               ..++++|||.+..... .....++..|+|||++.+. .++.++|||||||++|+|++| ..||...+....
T Consensus       145 ---------~~~~l~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~  214 (258)
T cd05078         145 ---------PFIKLSDPGISITVLP-KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK  214 (258)
T ss_pred             ---------ceEEecccccccccCC-chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH
Confidence                     3479999998765432 2335688899999999874 578999999999999999998 466654443322


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      .... .....                                                 .+...+..+.+||.+||+.||
T Consensus       215 ~~~~-~~~~~-------------------------------------------------~~~~~~~~~~~li~~~l~~~p  244 (258)
T cd05078         215 LQFY-EDRHQ-------------------------------------------------LPAPKWTELANLINQCMDYEP  244 (258)
T ss_pred             HHHH-Hcccc-------------------------------------------------CCCCCcHHHHHHHHHHhccCh
Confidence            1111 00000                                                 011233457899999999999


Q ss_pred             CCCCCHHHHhcC
Q 047395          410 SSRLTAHDALKH  421 (432)
Q Consensus       410 ~~R~ta~elL~h  421 (432)
                      ++|||++++++.
T Consensus       245 ~~Rps~~~il~~  256 (258)
T cd05078         245 DFRPSFRAIIRD  256 (258)
T ss_pred             hhCCCHHHHHHh
Confidence            999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=3.6e-40  Score=311.84  Aligned_cols=248  Identities=19%  Similarity=0.312  Sum_probs=191.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecC-------CCcEEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeec
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE-------TGETVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRN  163 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~-------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~  163 (432)
                      .++|.+.+.||+|+||.||+|.+..       +...+|+|+++..  ......+..|+.++..+ +|     +||+++++
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h-----~~i~~~~~   91 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH-----KNIINLLG   91 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCC-----CCEeeEEE
Confidence            4689999999999999999998643       2357999998753  23345677788888888 45     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcE
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNY--------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI  228 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  228 (432)
                      ++...+..|+||||+ +++|.+++.....              ..+++.+++.++.||+.||+|||++|++||||||+||
T Consensus        92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  171 (307)
T cd05098          92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  171 (307)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence            999999999999999 8999999986431              2478899999999999999999999999999999999


Q ss_pred             EeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccch
Q 047395          229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCD  303 (432)
Q Consensus       229 li~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sD  303 (432)
                      |++.++                           .++|+|||.+......     .....++..|+|||++.+..++.++|
T Consensus       172 ll~~~~---------------------------~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  224 (307)
T cd05098         172 LVTEDN---------------------------VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD  224 (307)
T ss_pred             EEcCCC---------------------------cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHH
Confidence            976544                           4556666655432211     11122356799999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchh
Q 047395          304 MWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL  382 (432)
Q Consensus       304 iwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (432)
                      ||||||++|+|++ |..||.+.+..+....+.....                                            
T Consensus       225 vwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------------------------------------------  260 (307)
T cd05098         225 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR--------------------------------------------  260 (307)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCC--------------------------------------------
Confidence            9999999999998 8899976554333322211100                                            


Q ss_pred             hhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       383 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                          ...+...+..+.+||.+||..+|++|||+.+++++
T Consensus       261 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         261 ----MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             ----CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence                00112345668899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.5e-41  Score=318.14  Aligned_cols=208  Identities=25%  Similarity=0.369  Sum_probs=177.9

Q ss_pred             CceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhh-hHhHHHHHHHHHHHHhcCCCCCceeEee
Q 047395           84 HYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLKRYDRSGSRCVQIR  162 (432)
Q Consensus        84 ~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~iv~~~  162 (432)
                      .|.+......+++|.-...||+|+||.||+|.-.. +..||||.+...... ..++.+|+.++..++|     +|+|+++
T Consensus        64 ~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H-----~Nlv~Ll  137 (361)
T KOG1187|consen   64 SFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRH-----PNLVKLL  137 (361)
T ss_pred             eeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCC-----cCcccEE
Confidence            45556666778899999999999999999998654 489999988765443 4559999999999988     9999999


Q ss_pred             cccccCC-eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cEeccCCCCcEEeecCCccc
Q 047395          163 NWFDYRN-HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR---LIHTDLKPENILFVSPEYLK  237 (432)
Q Consensus       163 ~~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIli~~~~~~k  237 (432)
                      +||.+.+ +.+||+||+ .|+|.+.|......+++|....+|+.++|.||+|||+..   ||||||||+|||        
T Consensus       138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNIL--------  209 (361)
T KOG1187|consen  138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNIL--------  209 (361)
T ss_pred             EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHee--------
Confidence            9999888 599999999 899999998765327899999999999999999999853   999999999999        


Q ss_pred             cCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-Cccc--c-ccCCCcchhHHHhCCCCCccchHHHHHHHHHH
Q 047395          238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-EHNY--I-VSTRHYRAPEVILGLGWSYPCDMWSVGCILIE  313 (432)
Q Consensus       238 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~--~-~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~e  313 (432)
                                         ++.+..+||+|||+|+.... ....  . .||.+|+|||.+.....+.++|||||||+|.|
T Consensus       210 -------------------LD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllE  270 (361)
T KOG1187|consen  210 -------------------LDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLE  270 (361)
T ss_pred             -------------------ECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHH
Confidence                               55677788888888866543 3222  2 79999999999998889999999999999999


Q ss_pred             HHhCCCCCCCC
Q 047395          314 LCSGEALFQTH  324 (432)
Q Consensus       314 lltg~~pf~~~  324 (432)
                      |+||+.+....
T Consensus       271 litgr~~~d~~  281 (361)
T KOG1187|consen  271 LITGRKAVDQS  281 (361)
T ss_pred             HHhCCcccCCC
Confidence            99999888753

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=3.5e-40  Score=309.56  Aligned_cols=246  Identities=21%  Similarity=0.322  Sum_probs=193.0

Q ss_pred             CceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+|.+.+.||.|+||.||+|.+.     .++..+++|.++... .....+.+|+.++..+.|     +||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~   79 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH-----EHIVKFYGVCGDG   79 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCC-----CCcceEEEEEccC
Confidence            46899999999999999999854     345679999986433 334567889999988877     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNY--------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSP  233 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~  233 (432)
                      +..++||||+ +++|.+++.....              ..+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~  159 (291)
T cd05094          80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN  159 (291)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence            9999999999 9999999976431              247899999999999999999999999999999999997655


Q ss_pred             CccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHH
Q 047395          234 EYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVG  308 (432)
Q Consensus       234 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG  308 (432)
                      +                           .++|+|||++......     .....++..|+|||++.+..++.++||||||
T Consensus       160 ~---------------------------~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  212 (291)
T cd05094         160 L---------------------------LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG  212 (291)
T ss_pred             C---------------------------cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHH
Confidence            4                           4555555555432211     1234567889999999998899999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhh
Q 047395          309 CILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM  387 (432)
Q Consensus       309 vil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (432)
                      |++|+|+| |..||...+..+....+....  .+                                              
T Consensus       213 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~--~~----------------------------------------------  244 (291)
T cd05094         213 VILWEIFTYGKQPWFQLSNTEVIECITQGR--VL----------------------------------------------  244 (291)
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHhCCC--CC----------------------------------------------
Confidence            99999999 999997766544333221100  00                                              


Q ss_pred             hhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       388 ~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      ......+..+.+++.+||+.||++|||+.++++
T Consensus       245 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         245 ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             CCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            001234556889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=3.8e-40  Score=307.35  Aligned_cols=245  Identities=21%  Similarity=0.302  Sum_probs=189.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCc----EEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGE----TVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~----~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .++|++.++||+|+||+||+|.+..+++    .||+|+++..  ......+.+|+.++..+.|     +||+.+++++..
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~~   80 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS-----PYVCRLLGICLT   80 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCC-----CCCceEEEEEcC
Confidence            4679999999999999999999877766    4899998632  2334567788888887766     999999998865


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                       ...++++||+ +|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||+..+             
T Consensus        81 -~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~-------------  145 (279)
T cd05109          81 -STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSP-------------  145 (279)
T ss_pred             -CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC-------------
Confidence             4577899999 999999998653 368999999999999999999999999999999999997544             


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCCcc-----ccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN-----YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                    +.+||+|||++........     ...++..|+|||.+.+..++.++|||||||++|||++ |..|
T Consensus       146 --------------~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p  211 (279)
T cd05109         146 --------------NHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKP  211 (279)
T ss_pred             --------------CcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence                          4466666666554322111     1234668999999998889999999999999999998 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...........+.... ..+                                               ....++..+.++
T Consensus       212 ~~~~~~~~~~~~~~~~~-~~~-----------------------------------------------~~~~~~~~~~~l  243 (279)
T cd05109         212 YDGIPAREIPDLLEKGE-RLP-----------------------------------------------QPPICTIDVYMI  243 (279)
T ss_pred             CCCCCHHHHHHHHHCCC-cCC-----------------------------------------------CCccCCHHHHHH
Confidence            97655443322221110 000                                               012345568899


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      |.+||+.||++||++.++++
T Consensus       244 i~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         244 MVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.2e-40  Score=311.28  Aligned_cols=247  Identities=21%  Similarity=0.262  Sum_probs=193.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCC-----CcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRET-----GETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .+|++.++||+|+||.||+|.+..+     ++.||||+++...  ...+.+..|+.++..+.|     +||+++++++..
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h-----~~iv~~~~~~~~   79 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQH-----PNIVCLLGVVTK   79 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCC-----CCcCeEEEEEcC
Confidence            4588899999999999999987543     5789999987432  234567788888888877     999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNN--------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  232 (432)
                      ....++++||+ +++|.+++....              ...+++..+..++.|++.||.|||++||+||||||+|||++.
T Consensus        80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~  159 (283)
T cd05091          80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD  159 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence            99999999999 899999986321              124788899999999999999999999999999999999765


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHH
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSV  307 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSl  307 (432)
                      ++                           .+||+|||+++.....     .....+++.|+|||++.+..++.++|||||
T Consensus       160 ~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl  212 (283)
T cd05091         160 KL---------------------------NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSY  212 (283)
T ss_pred             CC---------------------------ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHH
Confidence            44                           4566666655432211     112345778999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhh
Q 047395          308 GCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV  386 (432)
Q Consensus       308 Gvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (432)
                      ||++|||++ |..||.+....+....+......                                               
T Consensus       213 G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~-----------------------------------------------  245 (283)
T cd05091         213 GVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVL-----------------------------------------------  245 (283)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-----------------------------------------------
Confidence            999999998 88999876655544433221100                                               


Q ss_pred             hhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       387 ~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                       .....++..+.+|+.+||+.+|.+||+++++++.
T Consensus       246 -~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         246 -PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             -CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence             0113456668899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=4e-40  Score=303.63  Aligned_cols=241  Identities=22%  Similarity=0.348  Sum_probs=194.3

Q ss_pred             eeeecccceEEEEEEecCC---CcEEEEEEeechhhh--hHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395          101 RKIGEGTFGQVLDCLDRET---GETVAIKVVRSIKKY--REAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~---~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      +.||+|+||.||+|.+...   +..||+|+++.....  ...+.+|++.+..+.|     ++++++++++.....+++||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~~~~~~~lv~   75 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGH-----PNVVRLLGVCTEEEPLYLVL   75 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCC-----CChheeeeeecCCCceEEEE
Confidence            4689999999999999866   889999999754332  5678889999988876     99999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          176 EML-GPSLYDFLRKNN-------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      ||+ +++|.+++....       ...+++..+..++.||+.||+|||++||+|+||||+||+++.++             
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~-------------  142 (262)
T cd00192          76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL-------------  142 (262)
T ss_pred             EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC-------------
Confidence            999 999999998751       24699999999999999999999999999999999999976544             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALF  321 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf  321 (432)
                                    .++|+|||.+......     .....++..|+|||.+.+..++.++|||||||++|+|++ |..||
T Consensus       143 --------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  208 (262)
T cd00192         143 --------------VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPY  208 (262)
T ss_pred             --------------cEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCC
Confidence                          4555666555443321     223456888999999998889999999999999999999 69999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ......+....+....  .                                              ......++.++.++|
T Consensus       209 ~~~~~~~~~~~~~~~~--~----------------------------------------------~~~~~~~~~~~~~li  240 (262)
T cd00192         209 PGLSNEEVLEYLRKGY--R----------------------------------------------LPKPEYCPDELYELM  240 (262)
T ss_pred             CCCCHHHHHHHHHcCC--C----------------------------------------------CCCCccCChHHHHHH
Confidence            8775544443332200  0                                              011123466789999


Q ss_pred             HHccccCCCCCCCHHHHhcC
Q 047395          402 QGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~h  421 (432)
                      .+||+.||++|||+.|++++
T Consensus       241 ~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         241 LSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHHccCCcccCcCHHHHHHh
Confidence            99999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=5.1e-40  Score=302.44  Aligned_cols=245  Identities=25%  Similarity=0.364  Sum_probs=194.7

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      .+|++.+.||.|+||.||+|.+. .+..+|+|+++........+.+|+++++.+.|     ++++++++++......|+|
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~~v   77 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSH-----PKLVQLYGVCTERSPICLV   77 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCC-----CCeeeEEEEEccCCceEEE
Confidence            46899999999999999999875 46789999987554445678889999999876     9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+ +++|.+++.... ..++++.++.++.|++.||+|||++|++|+||||+||+++.++                   
T Consensus        78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~-------------------  137 (256)
T cd05112          78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQ-------------------  137 (256)
T ss_pred             EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCC-------------------
Confidence            9999 899999997654 3589999999999999999999999999999999999975544                   


Q ss_pred             cccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE  328 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~  328 (432)
                              .++|+|||.+......    .....++..|+|||.+.+..++.++|||||||++|+|++ |..||.......
T Consensus       138 --------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  209 (256)
T cd05112         138 --------VVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE  209 (256)
T ss_pred             --------eEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence                    4566666655432211    112234568999999998889999999999999999998 999998766544


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.......                                                .....+..+.+|+.+||+.+
T Consensus       210 ~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~l~~~~l~~~  241 (256)
T cd05112         210 VVETINAGFRLY------------------------------------------------KPRLASQSVYELMQHCWKER  241 (256)
T ss_pred             HHHHHhCCCCCC------------------------------------------------CCCCCCHHHHHHHHHHcccC
Confidence            443321110000                                                01123456889999999999


Q ss_pred             CCCCCCHHHHhcC
Q 047395          409 PSSRLTAHDALKH  421 (432)
Q Consensus       409 P~~R~ta~elL~h  421 (432)
                      |++|||+.+++++
T Consensus       242 p~~Rp~~~~~l~~  254 (256)
T cd05112         242 PEDRPSFSLLLHQ  254 (256)
T ss_pred             hhhCCCHHHHHHh
Confidence            9999999999863

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=9.6e-40  Score=300.37  Aligned_cols=249  Identities=27%  Similarity=0.436  Sum_probs=201.2

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +|++.++||.|+||.||++.+..+++.+|+|.+....   .....+.+|+.+++.++|     +||+++++++......|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~   75 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH-----PNIISYKEAFLDGNKLC   75 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC-----CCchhhhhhhccCCEEE
Confidence            5899999999999999999999999999999987432   334566778888888876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          173 IVFEML-GPSLYDFLRKNN--YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +||||+ +++|.+++....  ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.                 
T Consensus        76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~-----------------  138 (256)
T cd08530          76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA-----------------  138 (256)
T ss_pred             EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec-----------------
Confidence            999999 999999987621  235899999999999999999999999999999999999754                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                .+.++|+|||.+...... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+..+
T Consensus       139 ----------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~  208 (256)
T cd08530         139 ----------NDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD  208 (256)
T ss_pred             ----------CCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                      445677777766543322 222457889999999999889999999999999999999999998766543


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+....  .+                                              ......+.++.++|.+||+.+
T Consensus       209 ~~~~~~~~~--~~----------------------------------------------~~~~~~~~~~~~li~~~l~~~  240 (256)
T cd08530         209 LRYKVQRGK--YP----------------------------------------------PIPPIYSQDLQNFIRSMLQVK  240 (256)
T ss_pred             HHHHHhcCC--CC----------------------------------------------CCchhhCHHHHHHHHHHcCCC
Confidence            332221110  00                                              001134556889999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 047395          409 PSSRLTAHDALKHPFF  424 (432)
Q Consensus       409 P~~R~ta~elL~hp~f  424 (432)
                      |++|||+.++++||++
T Consensus       241 p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         241 PKLRPNCDKILASPAV  256 (256)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=2.5e-41  Score=333.89  Aligned_cols=246  Identities=22%  Similarity=0.345  Sum_probs=207.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecC-----CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE-----TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~-----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ..+.+..+.||+|.||+||+|+...     ....||||.++..  ...+.+|++|++++..|+|     +|||++++++.
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H-----~nIVrLlGVC~  559 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQH-----PNIVRLLGVCR  559 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccC-----CCeEEEEEEEc
Confidence            4567888999999999999997643     2357999999853  3467899999999999998     99999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecC
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNY------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSP  233 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~  233 (432)
                      .++.+|+|+||+ .|+|.+||.....            .+++..+.+.|+.||+.|+.||-++.+|||||-..|+||   
T Consensus       560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV---  636 (774)
T KOG1026|consen  560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV---  636 (774)
T ss_pred             cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee---
Confidence            999999999999 9999999985321            238899999999999999999999999999999999995   


Q ss_pred             CccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccc-----cCCCcchhHHHhCCCCCccchHHHHH
Q 047395          234 EYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIV-----STRHYRAPEVILGLGWSYPCDMWSVG  308 (432)
Q Consensus       234 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~-----gt~~y~aPE~~~~~~~~~~sDiwSlG  308 (432)
                                              ..+..|||+|||+++..-...-+.+     -...|||||.|+..+|+.+|||||+|
T Consensus       637 ------------------------ge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~G  692 (774)
T KOG1026|consen  637 ------------------------GENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFG  692 (774)
T ss_pred             ------------------------ccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhh
Confidence                                    4566677777777765433322222     25689999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhh
Q 047395          309 CILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM  387 (432)
Q Consensus       309 vil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (432)
                      |+|||+++ |+.||.+.++.+.++.|....-                                                .
T Consensus       693 VvLWEIFsyG~QPy~glSn~EVIe~i~~g~l------------------------------------------------L  724 (774)
T KOG1026|consen  693 VVLWEIFSYGKQPYYGLSNQEVIECIRAGQL------------------------------------------------L  724 (774)
T ss_pred             hhhhhhhccccCcccccchHHHHHHHHcCCc------------------------------------------------c
Confidence            99999998 9999999999998887754311                                                2


Q ss_pred             hhcccchHHHHHHHHHccccCCCCCCCHHHHh
Q 047395          388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL  419 (432)
Q Consensus       388 ~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL  419 (432)
                      ..++.++.++.+||..||+.+|.+||++.||-
T Consensus       725 ~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  725 SCPENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            23467888999999999999999999999874

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=4.6e-40  Score=307.44  Aligned_cols=259  Identities=24%  Similarity=0.311  Sum_probs=188.7

Q ss_pred             cCce-EEEeeeecccceEEEEEE----ecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           94 TSRY-KILRKIGEGTFGQVLDCL----DRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        94 ~~~y-~i~~~lg~G~~g~V~~a~----~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .+|| ++.+.||+|+||+||++.    ...++..||+|+++...  .....+.+|+++++.+.|     +||+++++++.
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~   76 (283)
T cd05080           2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYH-----ENIVKYKGCCS   76 (283)
T ss_pred             ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEe
Confidence            3556 999999999999998865    33567899999987532  345667889999999877     99999999865


Q ss_pred             c--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          167 Y--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       167 ~--~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                      .  ...+++||||+ +++|.+++...   .+++..++.++.|++.||.|||++||+||||||+|||++.++         
T Consensus        77 ~~~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~---------  144 (283)
T cd05080          77 EQGGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR---------  144 (283)
T ss_pred             cCCCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCC---------
Confidence            4  35689999999 99999999875   499999999999999999999999999999999999976544         


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCCc------cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg  317 (432)
                                        .++|+|||++.......      ....++..|+|||.+.+..++.++|||||||++|+|++|
T Consensus       145 ------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg  206 (283)
T cd05080         145 ------------------LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTH  206 (283)
T ss_pred             ------------------cEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhC
Confidence                              45566666554332211      112346679999999888899999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ..||....... ...+....+....                            ..+.......    ........++..+
T Consensus       207 ~~p~~~~~~~~-~~~~~~~~~~~~~----------------------------~~~~~~~~~~----~~~~~~~~~~~~~  253 (283)
T cd05080         207 CDSKQSPPKKF-EEMIGPKQGQMTV----------------------------VRLIELLERG----MRLPCPKNCPQEV  253 (283)
T ss_pred             CCCCCCCcchh-hhhhcccccccch----------------------------hhhhhhhhcC----CCCCCCCCCCHHH
Confidence            99986543210 0000000000000                            0000000000    0001123456779


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      .+++.+||+.||++|||++++++
T Consensus       254 ~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         254 YILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHHHHHhccChhhCCCHHHHHH
Confidence            99999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.3e-40  Score=306.93  Aligned_cols=243  Identities=26%  Similarity=0.433  Sum_probs=189.2

Q ss_pred             EEEeeeecccceEEEEEEec----CCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           98 KILRKIGEGTFGQVLDCLDR----ETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        98 ~i~~~lg~G~~g~V~~a~~~----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++.+.||.|.||.||+|...    ..+..|+||+++..  ....+.+.+|++.+..++|     +||+++++++...+..
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h-----~ni~~~~g~~~~~~~~   76 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRH-----PNIVKLYGFCIENEPL   76 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSB-----TTBE-EEEEEESSSSE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccc-----cccccccccccccccc
Confidence            46789999999999999988    44678999999642  2346788899999999977     9999999999988889


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      ++|+||+ +++|.++|.......+++..+..++.||+.||.|||+++|+|+||+++|||++.++                
T Consensus        77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~----------------  140 (259)
T PF07714_consen   77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG----------------  140 (259)
T ss_dssp             EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT----------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------------
Confidence            9999999 89999999987445799999999999999999999999999999999999976544                


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH  324 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~  324 (432)
                                 .+||+|||++......     .....+...|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus       141 -----------~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~  209 (259)
T PF07714_consen  141 -----------QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY  209 (259)
T ss_dssp             -----------EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS
T ss_pred             -----------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                       5666666655543111     112345678999999998889999999999999999999 78999877


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+....+.+...                                                ......++..+.++|.+|
T Consensus       210 ~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~li~~C  241 (259)
T PF07714_consen  210 DNEEIIEKLKQGQR------------------------------------------------LPIPDNCPKDIYSLIQQC  241 (259)
T ss_dssp             CHHHHHHHHHTTEE------------------------------------------------TTSBTTSBHHHHHHHHHH
T ss_pred             cccccccccccccc------------------------------------------------ceeccchhHHHHHHHHHH
Confidence            66554444322111                                                011234567789999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 047395          405 LRYDPSSRLTAHDALK  420 (432)
Q Consensus       405 L~~dP~~R~ta~elL~  420 (432)
                      |..||++|||+.++++
T Consensus       242 ~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  242 WSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             T-SSGGGS--HHHHHH
T ss_pred             cCCChhhCcCHHHHHh
Confidence            9999999999999974

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=6.1e-40  Score=308.59  Aligned_cols=254  Identities=20%  Similarity=0.309  Sum_probs=195.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCC----------------cEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETG----------------ETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSG  155 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~----------------~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~  155 (432)
                      .++|++.+.||+|+||.||+|.+..++                ..||+|.+...  ....+.+.+|++++..++|     
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~-----   78 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSD-----   78 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCC-----
Confidence            357999999999999999999876543                56899998643  2345678889999999987     


Q ss_pred             CceeEeecccccCCeEEEEEccC-CCCHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCC
Q 047395          156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNN---------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKP  225 (432)
Q Consensus       156 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  225 (432)
                      +||+++++++..+...++|||++ +++|.+++....         ...+++..++.++.|++.||.|||++||+||||||
T Consensus        79 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp  158 (296)
T cd05051          79 PNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLAT  158 (296)
T ss_pred             CCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccch
Confidence            99999999999989999999999 899999997643         12589999999999999999999999999999999


Q ss_pred             CcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCc
Q 047395          226 ENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSY  300 (432)
Q Consensus       226 ~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~  300 (432)
                      +||+++.++                           .++|+|||.+......     .....++..|+|||++.+..++.
T Consensus       159 ~Nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  211 (296)
T cd05051         159 RNCLVGKNY---------------------------TIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTT  211 (296)
T ss_pred             hceeecCCC---------------------------ceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCc
Confidence            999976544                           4555555554432111     12234577899999999888999


Q ss_pred             cchHHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhc
Q 047395          301 PCDMWSVGCILIELCS--GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK  378 (432)
Q Consensus       301 ~sDiwSlGvil~ellt--g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (432)
                      ++|||||||++|||++  |..||...+..+.+..+.........                   .                
T Consensus       212 ~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-------------------~----------------  256 (296)
T cd05051         212 KSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGR-------------------Q----------------  256 (296)
T ss_pred             cchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccc-------------------c----------------
Confidence            9999999999999998  77888766655444333221110000                   0                


Q ss_pred             CchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                            ........++.++.+||.+||+.||++|||+.|+++
T Consensus       257 ------~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         257 ------IYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             ------ccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence                  000011234567899999999999999999999964

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=4.4e-40  Score=309.61  Aligned_cols=256  Identities=24%  Similarity=0.412  Sum_probs=194.8

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++...  .....+..|+.++..+.    .|+||+++++++......
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~----~~~~i~~~~~~~~~~~~~   89 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSH----DCPYIVKCYGYFITDSDV   89 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhcc----CCCchHhhheeeecCCeE
Confidence            367999999999999999999999889999999987432  22334555666554443    359999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||++++|.+++.... ..+++..+..++.||+.||.|||+ .||+||||+|+||+++.+                 
T Consensus        90 ~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~-----------------  151 (296)
T cd06618          90 FICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS-----------------  151 (296)
T ss_pred             EEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC-----------------
Confidence            9999999888888877644 368999999999999999999997 699999999999997554                 


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCC----CCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                +.++|+|||.+......  .....++..|+|||.+.+..    ++.++|||||||++|+|++|+.||...
T Consensus       152 ----------~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  221 (296)
T cd06618         152 ----------GNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNC  221 (296)
T ss_pred             ----------CCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcc
Confidence                      45666666655433221  12235778899999997653    788999999999999999999999753


Q ss_pred             Cc-HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          325 EN-LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       325 ~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .. .+.+..+   .....                   ..++                        ....++..+.+||.+
T Consensus       222 ~~~~~~~~~~---~~~~~-------------------~~~~------------------------~~~~~~~~l~~li~~  255 (296)
T cd06618         222 KTEFEVLTKI---LQEEP-------------------PSLP------------------------PNEGFSPDFCSFVDL  255 (296)
T ss_pred             hhHHHHHHHH---hcCCC-------------------CCCC------------------------CCCCCCHHHHHHHHH
Confidence            22 1111111   11000                   0000                        001245568899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||..||++|||++++++||||...
T Consensus       256 ~l~~~p~~Rp~~~~il~~~~~~~~  279 (296)
T cd06618         256 CLTKDHRKRPKYRELLQHPFIRRY  279 (296)
T ss_pred             HccCChhhCCCHHHHhcChhhhcc
Confidence            999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=1e-39  Score=301.30  Aligned_cols=247  Identities=24%  Similarity=0.357  Sum_probs=194.7

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ...++|++.++||+|+||.||+|.+. .+..+|+|.+.......+.+.+|+.+++.+.|     +||+++++.+.. ...
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~-~~~   75 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH-----DKLVKLHAVVTK-EPI   75 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCC-----CCcceEEEEEcC-CCe
Confidence            34578999999999999999999854 45679999987655556678889999998877     999999998877 778


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +++|||+ +++|.+++.......+++..+..++.||+.||.|||+.|++|+||||+||+++..+                
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~----------------  139 (260)
T cd05073          76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL----------------  139 (260)
T ss_pred             EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC----------------
Confidence            9999999 89999999876545688999999999999999999999999999999999976544                


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHE  325 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~  325 (432)
                                 .++|+|||.+......    .....++..|+|||++....++.++|||||||++|++++ |..||.+.+
T Consensus       140 -----------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~  208 (260)
T cd05073         140 -----------VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS  208 (260)
T ss_pred             -----------cEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC
Confidence                       4555555554432211    111234567999999998889999999999999999999 999998765


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....+.....                                                .......+..+.+++.+||
T Consensus       209 ~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~i~~~l  240 (260)
T cd05073         209 NPEVIRALERGYR------------------------------------------------MPRPENCPEELYNIMMRCW  240 (260)
T ss_pred             HHHHHHHHhCCCC------------------------------------------------CCCcccCCHHHHHHHHHHc
Confidence            5443332211100                                                0011234556889999999


Q ss_pred             ccCCCCCCCHHHHhc
Q 047395          406 RYDPSSRLTAHDALK  420 (432)
Q Consensus       406 ~~dP~~R~ta~elL~  420 (432)
                      +.||++||++.++++
T Consensus       241 ~~~p~~Rp~~~~l~~  255 (260)
T cd05073         241 KNRPEERPTFEYIQS  255 (260)
T ss_pred             ccCcccCcCHHHHHH
Confidence            999999999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=1.6e-40  Score=302.31  Aligned_cols=228  Identities=25%  Similarity=0.361  Sum_probs=179.9

Q ss_pred             ccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-CCCHHH
Q 047395          106 GTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYD  184 (432)
Q Consensus       106 G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~  184 (432)
                      |.+|.||+|++..+++.||+|.++....    ...|...+...     .|+||+++++++...+..|+||||+ +++|.+
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   74 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPH-----CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS   74 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhc-----CCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence            8899999999999999999999875432    22333333322     3499999999999999999999999 899999


Q ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeE
Q 047395          185 FLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK  264 (432)
Q Consensus       185 ~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~k  264 (432)
                      ++.+..  .+++..+..++.|++.||.|||++||+||||||+||+++.                           ++.++
T Consensus        75 ~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~---------------------------~~~~~  125 (237)
T cd05576          75 HISKFL--NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDD---------------------------RGHIQ  125 (237)
T ss_pred             HHHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC---------------------------CCCEE
Confidence            998754  5999999999999999999999999999999999999654                           44567


Q ss_pred             EeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHH
Q 047395          265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHM  344 (432)
Q Consensus       265 l~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~  344 (432)
                      ++|||.+...........++..|+|||.+.+..++.++||||+||++|+|++|..||.......                
T Consensus       126 l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----------------  189 (237)
T cd05576         126 LTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI----------------  189 (237)
T ss_pred             EecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----------------
Confidence            7777765544433334456778999999988888999999999999999999998875321100                


Q ss_pred             HHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCH-----HHHh
Q 047395          345 LKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTA-----HDAL  419 (432)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta-----~elL  419 (432)
                          ..       ...                          ...++.+++.+.+||.+||+.||++|+|+     ++++
T Consensus       190 ----~~-------~~~--------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~  232 (237)
T cd05576         190 ----NT-------HTT--------------------------LNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIK  232 (237)
T ss_pred             ----cc-------ccc--------------------------cCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHH
Confidence                00       000                          00112345668899999999999999986     9999


Q ss_pred             cCCCC
Q 047395          420 KHPFF  424 (432)
Q Consensus       420 ~hp~f  424 (432)
                      +||||
T Consensus       233 ~h~~~  237 (237)
T cd05576         233 SHPFF  237 (237)
T ss_pred             cCCCC
Confidence            99998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=4.8e-40  Score=304.52  Aligned_cols=247  Identities=27%  Similarity=0.429  Sum_probs=193.8

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||.|+||.||+|.+..+++.+|||.+...    ......+.+|+.+++.+.|     +||+++++++..++.
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h-----~~i~~~~~~~~~~~~   76 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH-----PNVIKYYASFIEDNE   76 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccC-----CchhhhhheeEeCCe
Confidence            4688999999999999999999999999999987642    2334567789999988877     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          171 ICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      .+++|||+ +++|.+++...  ....+++..++.++.||+.||.|||++||+|+||||+||+++.+              
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~--------------  142 (267)
T cd08229          77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT--------------  142 (267)
T ss_pred             EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC--------------
Confidence            99999999 89999998742  22358999999999999999999999999999999999997554              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                   +.++|+|||++......   .....|+..|+|||.+.+..++.++||||||+++|+|++|..||.+.
T Consensus       143 -------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  209 (267)
T cd08229         143 -------------GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             -------------CCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc
Confidence                         45666666655433221   12346888999999999888999999999999999999999999754


Q ss_pred             CcH--HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          325 ENL--EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       325 ~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ...  .....+...                         .++.                      ......+..+.++|.
T Consensus       210 ~~~~~~~~~~~~~~-------------------------~~~~----------------------~~~~~~~~~~~~li~  242 (267)
T cd08229         210 KMNLYSLCKKIEQC-------------------------DYPP----------------------LPSDHYSEELRQLVN  242 (267)
T ss_pred             cchHHHHhhhhhcC-------------------------CCCC----------------------CCcccccHHHHHHHH
Confidence            321  111111000                         0000                      001234566899999


Q ss_pred             HccccCCCCCCCHHHHhc
Q 047395          403 GLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~  420 (432)
                      +||+.||++|||+.+|++
T Consensus       243 ~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         243 MCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HhcCCCcccCCCHHHHHH
Confidence            999999999999997764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.6e-40  Score=310.06  Aligned_cols=253  Identities=20%  Similarity=0.297  Sum_probs=192.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCC--------------cEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCce
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETG--------------ETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRC  158 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~--------------~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i  158 (432)
                      ++|++.+.||+|+||.||+|++..++              ..||+|+++..  ......+.+|++++..+.|     +|+
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h-----~~i   79 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKN-----PNI   79 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC-----CCc
Confidence            58999999999999999999875432              35899998642  3344568889999999987     999


Q ss_pred             eEeecccccCCeEEEEEccC-CCCHHHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCc
Q 047395          159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNY----------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPEN  227 (432)
Q Consensus       159 v~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  227 (432)
                      +++++++...+..++||||+ +++|.+++.....          ..+++..+..++.|++.||.|||++|++||||||+|
T Consensus        80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N  159 (295)
T cd05097          80 IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN  159 (295)
T ss_pred             CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh
Confidence            99999999999999999999 8999999965321          136788999999999999999999999999999999


Q ss_pred             EEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccc
Q 047395          228 ILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPC  302 (432)
Q Consensus       228 Ili~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~s  302 (432)
                      |+++.++                           .+||+|||++......     .....++..|+|||++.+..++.++
T Consensus       160 ill~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  212 (295)
T cd05097         160 CLVGNHY---------------------------TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTAS  212 (295)
T ss_pred             EEEcCCC---------------------------cEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchh
Confidence            9976544                           4555666555432111     1122346789999999988899999


Q ss_pred             hHHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCc
Q 047395          303 DMWSVGCILIELCS--GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP  380 (432)
Q Consensus       303 DiwSlGvil~ellt--g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (432)
                      |||||||++|+|++  |..||...+..+....+........                  ...                  
T Consensus       213 DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------~~~------------------  256 (295)
T cd05097         213 DVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQG------------------RQI------------------  256 (295)
T ss_pred             hHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhcc------------------ccc------------------
Confidence            99999999999988  6788887665544433322110000                  000                  


Q ss_pred             hhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       381 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                           .....+..++.+.+||.+||+.||++|||++++++
T Consensus       257 -----~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         257 -----YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             -----cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                 00011234567899999999999999999999974

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-40  Score=295.36  Aligned_cols=255  Identities=24%  Similarity=0.410  Sum_probs=203.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|.++.+||+|+|++|.+++.++|.+.+|+|++++..    ..-+..+.|..+.+....    +|.+|-++.+|+.+.
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn----~pflvglhscfqtes  324 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN----NPFLVGLHSCFQTES  324 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccC----CCeEEehhhhhcccc
Confidence            468999999999999999999999999999999997533    223445667666666543    599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+++|.||+ ||+|.-.+.+++  +++++.++.+...|+.||.|||++|||.||||.+|+|++..               
T Consensus       325 rlffvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldae---------------  387 (593)
T KOG0695|consen  325 RLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAE---------------  387 (593)
T ss_pred             eEEEEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccC---------------
Confidence            999999999 999988887765  79999999999999999999999999999999999996554               


Q ss_pred             CCccccccCCCCCCeEEeecCCccc---ccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC-
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAY---EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH-  324 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~-  324 (432)
                                  +.+||+|+|+++.   .+...+++||||.|.|||++.+..|+..+|.|+|||+++||+.|+.||.-. 
T Consensus       388 ------------ghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivg  455 (593)
T KOG0695|consen  388 ------------GHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVG  455 (593)
T ss_pred             ------------CceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceec
Confidence                        4556666665554   234456789999999999999999999999999999999999999999621 


Q ss_pred             ------CcHHHH-HHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          325 ------ENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       325 ------~~~~~~-~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                            +..+.+ +.|.+..-.+|.                                                 ..|-.+
T Consensus       456 m~n~d~ntedylfqvilekqiripr-------------------------------------------------slsvka  486 (593)
T KOG0695|consen  456 MDNPDMNTEDYLFQVILEKQIRIPR-------------------------------------------------SLSVKA  486 (593)
T ss_pred             CCCcccchhHHHHHHHhhhcccccc-------------------------------------------------eeehhh
Confidence                  111221 222222112221                                                 223335


Q ss_pred             HHHHHHccccCCCCCC------CHHHHhcCCCCCCCccC
Q 047395          398 IDLLQGLLRYDPSSRL------TAHDALKHPFFTRDYYR  430 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~------ta~elL~hp~f~~~~~~  430 (432)
                      ..+++..|++||.+|+      ...++..|+||....|+
T Consensus       487 s~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd  525 (593)
T KOG0695|consen  487 SHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWD  525 (593)
T ss_pred             HHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHH
Confidence            6889999999999998      47899999999876553

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=6.1e-40  Score=302.24  Aligned_cols=236  Identities=21%  Similarity=0.314  Sum_probs=184.8

Q ss_pred             eeecccceEEEEEEe--cCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          102 KIGEGTFGQVLDCLD--RETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       102 ~lg~G~~g~V~~a~~--~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +||+|+||.||+|.+  ..++..+|+|+++..   ....+.+..|+.++..+.|     +||++++++++. ...++|||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~-~~~~lv~e   75 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDN-----PYIVRMIGICEA-ESWMLVME   75 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCC-----CCcceEEEEEcC-CCcEEEEe
Confidence            689999999999964  456789999998643   2334567888998888876     999999998764 56789999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK  255 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~  255 (432)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++                     
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~---------------------  132 (257)
T cd05116          76 LAELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH---------------------  132 (257)
T ss_pred             cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC---------------------
Confidence            99 889999997654  689999999999999999999999999999999999975544                     


Q ss_pred             cCCCCCCeEEeecCCcccccCCc------cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHH
Q 047395          256 RLPKSSAIKVIDFGSTAYEHQEH------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE  328 (432)
Q Consensus       256 ~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~  328 (432)
                            .++|+|||++.......      ....++..|+|||.+....++.++|||||||++|||++ |..||...+..+
T Consensus       133 ------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  206 (257)
T cd05116         133 ------YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE  206 (257)
T ss_pred             ------eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                  45666666554332211      11234578999999988888999999999999999998 999998766555


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.+...  +                                              ..+..++..+.+||.+||+.|
T Consensus       207 ~~~~i~~~~~--~----------------------------------------------~~~~~~~~~l~~li~~~~~~~  238 (257)
T cd05116         207 VTQMIESGER--M----------------------------------------------ECPQRCPPEMYDLMKLCWTYG  238 (257)
T ss_pred             HHHHHHCCCC--C----------------------------------------------CCCCCCCHHHHHHHHHHhccC
Confidence            4443322110  0                                              011235666899999999999


Q ss_pred             CCCCCCHHHHhc
Q 047395          409 PSSRLTAHDALK  420 (432)
Q Consensus       409 P~~R~ta~elL~  420 (432)
                      |++||++++|..
T Consensus       239 p~~Rp~~~~i~~  250 (257)
T cd05116         239 VDERPGFAVVEL  250 (257)
T ss_pred             chhCcCHHHHHH
Confidence            999999998864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=4.9e-40  Score=302.31  Aligned_cols=242  Identities=24%  Similarity=0.326  Sum_probs=192.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      ++|++.+.||+|+||.||++.  .+++.||+|+++... ..+.+.+|+.++..++|     +|++++++++... ..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~-----~~i~~~~~~~~~~-~~~~v   76 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-TAQAFLEETAVMTKLHH-----KNLVRLLGVILHN-GLYIV   76 (254)
T ss_pred             HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-hHHHHHHHHHHHHhCCC-----CCcCeEEEEEcCC-CcEEE
Confidence            569999999999999999985  468899999986532 34567889999988877     9999999988654 47999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+ +++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.                     
T Consensus        77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~---------------------  135 (254)
T cd05083          77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSE---------------------  135 (254)
T ss_pred             EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC---------------------
Confidence            9999 899999998765456899999999999999999999999999999999999654                     


Q ss_pred             cccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAM  332 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~  332 (432)
                            ++.++|+|||.+............+..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....
T Consensus       136 ------~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~  209 (254)
T cd05083         136 ------DGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKEC  209 (254)
T ss_pred             ------CCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence                  445667777766543332233344567999999988889999999999999999998 9999987655443332


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      +.+....                                                ...+.++..+.++|.+||+.+|++|
T Consensus       210 ~~~~~~~------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R  241 (254)
T cd05083         210 VEKGYRM------------------------------------------------EPPEGCPADVYVLMTSCWETEPKKR  241 (254)
T ss_pred             HhCCCCC------------------------------------------------CCCCcCCHHHHHHHHHHcCCChhhC
Confidence            2111000                                                0012345668899999999999999


Q ss_pred             CCHHHHhc
Q 047395          413 LTAHDALK  420 (432)
Q Consensus       413 ~ta~elL~  420 (432)
                      |++++++.
T Consensus       242 p~~~~l~~  249 (254)
T cd05083         242 PSFHKLRE  249 (254)
T ss_pred             cCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=5.7e-40  Score=306.38  Aligned_cols=246  Identities=21%  Similarity=0.334  Sum_probs=192.4

Q ss_pred             CceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+|++.++||+|+||.||+|...     .++..+|+|.++.. ......+.+|++++..+.|     +||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~   79 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQH-----QHIVRFYGVCTEG   79 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCC-----CCCceEEEEEecC
Confidence            57889999999999999999743     34668999988643 3445678889999998877     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNY-------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE  234 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~-------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  234 (432)
                      ...++||||+ +++|.+++.....             ..+++..+..++.||+.||+|||++||+||||||+|||+++++
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~  159 (280)
T cd05092          80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL  159 (280)
T ss_pred             CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence            9999999999 8999999986431             2478999999999999999999999999999999999976544


Q ss_pred             ccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHH
Q 047395          235 YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC  309 (432)
Q Consensus       235 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv  309 (432)
                                                 .++|+|||++......     .....+++.|+|||.+.+..++.++|||||||
T Consensus       160 ---------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  212 (280)
T cd05092         160 ---------------------------VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGV  212 (280)
T ss_pred             ---------------------------CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHH
Confidence                                       4555555554322111     11233567899999999989999999999999


Q ss_pred             HHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhh
Q 047395          310 ILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ  388 (432)
Q Consensus       310 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (432)
                      ++|+|++ |.+||......+....+.....                                                ..
T Consensus       213 il~el~~~g~~p~~~~~~~~~~~~~~~~~~------------------------------------------------~~  244 (280)
T cd05092         213 VLWEIFTYGKQPWYQLSNTEAIECITQGRE------------------------------------------------LE  244 (280)
T ss_pred             HHHHHHcCCCCCCccCCHHHHHHHHHcCcc------------------------------------------------CC
Confidence            9999998 9999976555443332211100                                                00


Q ss_pred             hcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       389 ~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      ....+++.+.+||.+||+.||.+||+++++++
T Consensus       245 ~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         245 RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            11234566889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1e-39  Score=302.53  Aligned_cols=246  Identities=22%  Similarity=0.329  Sum_probs=193.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCc---EEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|+..+.||+|+||.||+|.+..++.   .+|+|.++..  ......+..|++++..+.|     +|++++.+++...
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~   78 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSH-----HNIIRLEGVVTKF   78 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC-----CCeeEEEEEEccC
Confidence            3578999999999999999999876654   7999988643  2334567788888888876     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+.||+|+||||+||+++.++             
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~-------------  144 (268)
T cd05063          79 KPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNL-------------  144 (268)
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCC-------------
Confidence            9999999999 889999997654 4689999999999999999999999999999999999976544             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCcc------ccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN------YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                    .++|+|||++........      ....+..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       145 --------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p  210 (268)
T cd05063         145 --------------ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERP  210 (268)
T ss_pred             --------------cEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCC
Confidence                          455555555443221110      1122457999999998889999999999999999997 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...+..+....+.... ..|                                               ....++..+.++
T Consensus       211 ~~~~~~~~~~~~i~~~~-~~~-----------------------------------------------~~~~~~~~~~~l  242 (268)
T cd05063         211 YWDMSNHEVMKAINDGF-RLP-----------------------------------------------APMDCPSAVYQL  242 (268)
T ss_pred             CCcCCHHHHHHHHhcCC-CCC-----------------------------------------------CCCCCCHHHHHH
Confidence            98766554444432211 000                                               011344568899


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      +.+||+.||++||++.++++
T Consensus       243 i~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         243 MLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHHHcCCCcccCcCHHHHHH
Confidence            99999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=2.2e-39  Score=299.96  Aligned_cols=247  Identities=27%  Similarity=0.443  Sum_probs=194.3

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.++..    ......+.+|+++++.+.|     ++++++++.+...+.
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~-----~~i~~~~~~~~~~~~   76 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDH-----PNVIKYLASFIENNE   76 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCC-----CCeeeeeeeeecCCe
Confidence            5799999999999999999999999999999988632    2335677889999998877     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          171 ICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      .++||||+ +++|.+++...  ....+++..+..++.||+.||.|||+.||+|+||||+||+++.+              
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~--------------  142 (267)
T cd08224          77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITAT--------------  142 (267)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCC--------------
Confidence            99999999 89999998753  22458999999999999999999999999999999999997554              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                   +.++|+|||.+......   .....++..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus       143 -------------~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  209 (267)
T cd08224         143 -------------GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             -------------CcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC
Confidence                         45666666655432221   12346788999999999888999999999999999999999999654


Q ss_pred             CcH--HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          325 ENL--EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       325 ~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ...  +....+...  ..+                    ..                         .....+..+.++|.
T Consensus       210 ~~~~~~~~~~~~~~--~~~--------------------~~-------------------------~~~~~~~~~~~~i~  242 (267)
T cd08224         210 KMNLYSLCKKIEKC--DYP--------------------PL-------------------------PADHYSEELRDLVS  242 (267)
T ss_pred             CccHHHHHhhhhcC--CCC--------------------CC-------------------------ChhhcCHHHHHHHH
Confidence            311  111111000  000                    00                         00134556889999


Q ss_pred             HccccCCCCCCCHHHHhc
Q 047395          403 GLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~  420 (432)
                      +||..+|++|||+.++++
T Consensus       243 ~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         243 RCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHcCCCcccCCCHHHHHH
Confidence            999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.3e-39  Score=308.92  Aligned_cols=248  Identities=20%  Similarity=0.319  Sum_probs=191.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecC-------CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE-------TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW  164 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~-------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~  164 (432)
                      .++|.+.++||+|+||.||+|.+..       ....+|+|+++..  ......+..|+.++..+..    |+||++++++
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~----h~~iv~~~~~   86 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGK----HKNIINLLGV   86 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccC----CCCeeeEEEE
Confidence            4689999999999999999998642       3457999998742  2334567788888888741    3999999999


Q ss_pred             cccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEE
Q 047395          165 FDYRNHICIVFEML-GPSLYDFLRKNN--------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL  229 (432)
Q Consensus       165 ~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  229 (432)
                      +...+.+|+||||+ +++|.+++....              ...+++..+..++.||+.||.|||++||+||||||+|||
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil  166 (314)
T cd05099          87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL  166 (314)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence            99889999999999 899999997642              134888999999999999999999999999999999999


Q ss_pred             eecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchH
Q 047395          230 FVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDM  304 (432)
Q Consensus       230 i~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDi  304 (432)
                      ++.++                           .+||+|||.++......     ....++..|+|||++.+..++.++||
T Consensus       167 l~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  219 (314)
T cd05099         167 VTEDN---------------------------VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDV  219 (314)
T ss_pred             EcCCC---------------------------cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchh
Confidence            76544                           45666666654332111     11123467999999998889999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhh
Q 047395          305 WSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ  383 (432)
Q Consensus       305 wSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (432)
                      |||||++|+|++ |..||.+.+..+....+.....                                             
T Consensus       220 wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---------------------------------------------  254 (314)
T cd05099         220 WSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR---------------------------------------------  254 (314)
T ss_pred             hHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---------------------------------------------
Confidence            999999999999 8999977655444433221100                                             


Q ss_pred             hhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       384 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                         ......++..+.+||.+||..||++|||+.++++
T Consensus       255 ---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         255 ---MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             ---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence               0011234556889999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=6.3e-40  Score=304.62  Aligned_cols=244  Identities=16%  Similarity=0.239  Sum_probs=185.7

Q ss_pred             EEEeeeecccceEEEEEEecCCCc--EEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-----
Q 047395           98 KILRKIGEGTFGQVLDCLDRETGE--TVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-----  167 (432)
Q Consensus        98 ~i~~~lg~G~~g~V~~a~~~~~~~--~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-----  167 (432)
                      .+.+.||+|+||.||+|.+..++.  .||+|.++..   ....+.+..|+.++..++|     +||+++++++..     
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~~   76 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDH-----PNVMRLIGVCLQTVESE   76 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCC-----CCcceEEEEEccCCccc
Confidence            467899999999999999887765  6999988642   3345567889999988877     999999986532     


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCc
Q 047395          168 -RNHICIVFEML-GPSLYDFLRKNN----YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       168 -~~~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                       ....+++|||+ +++|.+++....    ...+++..+..++.||+.||.|||++||+||||||+|||++.++       
T Consensus        77 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-------  149 (272)
T cd05075          77 GYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENM-------  149 (272)
T ss_pred             CCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCC-------
Confidence             23578999999 899999885321    13488999999999999999999999999999999999976544       


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt  316 (432)
                                          .++|+|||++......     .....+++.|+|||.+.+..++.++|||||||++|+|++
T Consensus       150 --------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~  209 (272)
T cd05075         150 --------------------NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIAT  209 (272)
T ss_pred             --------------------CEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHc
Confidence                                4555555555432211     112245678999999999889999999999999999999


Q ss_pred             -CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchH
Q 047395          317 -GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG  395 (432)
Q Consensus       317 -g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (432)
                       |..||.+....+....+.....  +                                              .....++.
T Consensus       210 ~g~~p~~~~~~~~~~~~~~~~~~--~----------------------------------------------~~~~~~~~  241 (272)
T cd05075         210 RGQTPYPGVENSEIYDYLRQGNR--L----------------------------------------------KQPPDCLD  241 (272)
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCC--C----------------------------------------------CCCCCCCH
Confidence             8999987655443332211100  0                                              00123455


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          396 YLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       396 ~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      .+.++|.+||+.||++|||+.+++++
T Consensus       242 ~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         242 GLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            68899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-42  Score=351.58  Aligned_cols=254  Identities=31%  Similarity=0.431  Sum_probs=205.9

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec---hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.-|++-...||.|.||.||-|.+..+|...|+|-++-   ..+....+.+|..+++.++|     ||+|+++++-...
T Consensus      1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnH-----pNlV~YyGVEvHR 1306 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNH-----PNLVRYYGVEVHR 1306 (1509)
T ss_pred             cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccC-----ccccccCceeecH
Confidence            456688999999999999999999999999999998752   23444567889999999998     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.++|.|||| +|+|.+++...+  ..++...+.+..|++.||.|||++|||||||||+||+++.+              
T Consensus      1307 ekv~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~-------------- 1370 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFN-------------- 1370 (1509)
T ss_pred             HHHHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecC--------------
Confidence            9999999999 999999998754  57888888999999999999999999999999999996554              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCc-------cccccCCCcchhHHHhCCC---CCccchHHHHHHHHHHHHhC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-------NYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~---~~~~sDiwSlGvil~elltg  317 (432)
                                   +.+|++|||.|.......       ....||+.|||||++.+..   ...++|||||||++.||+||
T Consensus      1371 -------------g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tG 1437 (1509)
T KOG4645|consen 1371 -------------GLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATG 1437 (1509)
T ss_pred             -------------CcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecC
Confidence                         456666666665433322       3468999999999998753   56789999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      +-||...++.-.+.... ..|..|+                                              .+..++.+-
T Consensus      1438 krPW~~~dne~aIMy~V-~~gh~Pq----------------------------------------------~P~~ls~~g 1470 (1509)
T KOG4645|consen 1438 KRPWAELDNEWAIMYHV-AAGHKPQ----------------------------------------------IPERLSSEG 1470 (1509)
T ss_pred             CCchhhccchhHHHhHH-hccCCCC----------------------------------------------CchhhhHhH
Confidence            99998765543221111 1222221                                              112356678


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      +|||..||+.||++|.++.|+|+|-|=+.
T Consensus      1471 ~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1471 RDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             HHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence            89999999999999999999999988654

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.6e-40  Score=300.88  Aligned_cols=237  Identities=22%  Similarity=0.340  Sum_probs=185.5

Q ss_pred             eeeecccceEEEEEEecCCC---cEEEEEEeechhh--hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395          101 RKIGEGTFGQVLDCLDRETG---ETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~---~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      ++||+|+||.||+|.+..++   ..+|+|.+.....  ....+.+|+.+++.+.|     +|++++++++. .+..++||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~-~~~~~~v~   74 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDH-----PCIVRLIGVCK-GEPLMLVM   74 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCC-----CCeeeEEEEEc-CCceEEEE
Confidence            47999999999999876555   7899999875433  45678889999988877     99999999876 45689999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          176 EML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ||+ +++|.+++....  .+++..+..++.|++.||+|||++|++|+||||+|||++.++.                   
T Consensus        75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~-------------------  133 (257)
T cd05060          75 ELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQ-------------------  133 (257)
T ss_pred             EeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCc-------------------
Confidence            999 899999998765  6899999999999999999999999999999999999766554                   


Q ss_pred             ccCCCCCCeEEeecCCcccccCCcc------ccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEHQEHN------YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                              ++|+|||.+........      ...++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..
T Consensus       134 --------~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~  205 (257)
T cd05060         134 --------AKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA  205 (257)
T ss_pred             --------EEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH
Confidence                    55555555443221111      1123467999999998889999999999999999998 99999876654


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+.....                                                ......++..+.++|.+||..
T Consensus       206 ~~~~~~~~~~~------------------------------------------------~~~~~~~~~~l~~li~~cl~~  237 (257)
T cd05060         206 EVIAMLESGER------------------------------------------------LPRPEECPQEIYSIMLSCWKY  237 (257)
T ss_pred             HHHHHHHcCCc------------------------------------------------CCCCCCCCHHHHHHHHHHhcC
Confidence            44333221100                                                001123456688999999999


Q ss_pred             CCCCCCCHHHHhc
Q 047395          408 DPSSRLTAHDALK  420 (432)
Q Consensus       408 dP~~R~ta~elL~  420 (432)
                      ||++|||+.++++
T Consensus       238 ~p~~Rp~~~~l~~  250 (257)
T cd05060         238 RPEDRPTFSELES  250 (257)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.7e-40  Score=303.68  Aligned_cols=245  Identities=18%  Similarity=0.250  Sum_probs=188.0

Q ss_pred             eEEEeeeecccceEEEEEEecCC---CcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC-
Q 047395           97 YKILRKIGEGTFGQVLDCLDRET---GETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN-  169 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~---~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~-  169 (432)
                      |++.+.||+|+||.||+|....+   +..||+|.++..   ......+.+|+..++.+.|     +|++++++++.... 
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~~~   75 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH-----PNVMKLIGVCFEASS   75 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCC-----CCeeeEEeeeccCCc
Confidence            57889999999999999987653   478999998743   2334567889988888877     99999998875544 


Q ss_pred             -----eEEEEEccC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccC
Q 047395          170 -----HICIVFEML-GPSLYDFLRKNN----YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIP  239 (432)
Q Consensus       170 -----~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~  239 (432)
                           ..++||||+ +++|.+++....    ...+++..+..++.|++.||.|||++||+||||||+||++++++     
T Consensus        76 ~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~-----  150 (273)
T cd05035          76 LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDM-----  150 (273)
T ss_pred             cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCC-----
Confidence                 379999999 999999986532    13589999999999999999999999999999999999976544     


Q ss_pred             CcccccCCCCCccccccCCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHH
Q 047395          240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       240 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~el  314 (432)
                                            .+||+|||.+.......     ....++..|+|||.+.+..++.++|||||||++|||
T Consensus       151 ----------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el  208 (273)
T cd05035         151 ----------------------TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI  208 (273)
T ss_pred             ----------------------eEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHH
Confidence                                  45556666554322111     112346689999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccc
Q 047395          315 CS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS  393 (432)
Q Consensus       315 lt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (432)
                      ++ |..||.+.+..+....+....  .                                              ...+..+
T Consensus       209 ~~~g~~p~~~~~~~~~~~~~~~~~--~----------------------------------------------~~~~~~~  240 (273)
T cd05035         209 ATRGQTPYPGVENHEIYDYLRHGN--R----------------------------------------------LKQPEDC  240 (273)
T ss_pred             HhCCCCCCCCCCHHHHHHHHHcCC--C----------------------------------------------CCCCcCC
Confidence            99 999998766544333221110  0                                              0011234


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          394 AGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       394 ~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      +..+.++|.+||+.||++|||+.|++++
T Consensus       241 ~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         241 LDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5668899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=1.1e-39  Score=308.15  Aligned_cols=247  Identities=18%  Similarity=0.306  Sum_probs=192.3

Q ss_pred             cCceEEEeeeecccceEEEEEEec-------CCCcEEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeec
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR-------ETGETVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRN  163 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~-------~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~  163 (432)
                      .++|++.+.||+|+||.||+|++.       ..+..||+|.++..  ......+.+|+.++..+ .|     +||+++++
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~~i~~~~~   88 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-----KNIINLLG   88 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccC-----CCchheeE
Confidence            568999999999999999999753       23457999998642  23345688899999888 45     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcE
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNY--------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI  228 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  228 (432)
                      ++......|+||||+ +++|.+++.....              ..++...+..++.||+.||.|||++||+||||||+||
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  168 (304)
T cd05101          89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV  168 (304)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence            999999999999999 8999999986421              2477888999999999999999999999999999999


Q ss_pred             EeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccch
Q 047395          229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCD  303 (432)
Q Consensus       229 li~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sD  303 (432)
                      |++.++                           .++|+|||.+......     .....++..|+|||++.+..++.++|
T Consensus       169 li~~~~---------------------------~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  221 (304)
T cd05101         169 LVTENN---------------------------VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  221 (304)
T ss_pred             EEcCCC---------------------------cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhh
Confidence            976544                           4555666555433211     11223567899999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchh
Q 047395          304 MWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL  382 (432)
Q Consensus       304 iwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (432)
                      ||||||++|+|++ |..||.+.+..+....+.....                                            
T Consensus       222 i~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------------------------------------------  257 (304)
T cd05101         222 VWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR--------------------------------------------  257 (304)
T ss_pred             HHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc--------------------------------------------
Confidence            9999999999998 8889977655443332211100                                            


Q ss_pred             hhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       383 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                          ......++..+.+||.+||..+|++|||+.|+++
T Consensus       258 ----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~  291 (304)
T cd05101         258 ----MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE  291 (304)
T ss_pred             ----CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence                0001234566889999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=6.7e-40  Score=314.63  Aligned_cols=250  Identities=22%  Similarity=0.341  Sum_probs=189.1

Q ss_pred             cCceEEEeeeecccceEEEEEEe-----cCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLD-----RETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~-----~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .++|++.+.||.|+||.||+|.+     ..+++.||||+++..  ......+.+|+.++..+.+    |+||+++++++.
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~----h~niv~~~~~~~   81 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH----HLNVVNLLGACT   81 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccC----CccHhhhcceee
Confidence            46899999999999999999985     346789999999743  2334567889999998854    399999998775


Q ss_pred             c-CCeEEEEEccC-CCCHHHHHHhcCC-----------------------------------------------------
Q 047395          167 Y-RNHICIVFEML-GPSLYDFLRKNNY-----------------------------------------------------  191 (432)
Q Consensus       167 ~-~~~~~lv~e~~-~~~L~~~l~~~~~-----------------------------------------------------  191 (432)
                      . +..+++||||+ +++|.+++.....                                                     
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (343)
T cd05103          82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV  161 (343)
T ss_pred             cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence            4 45789999999 9999999975321                                                     


Q ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCC
Q 047395          192 ------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK  259 (432)
Q Consensus       192 ------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  259 (432)
                                  ..+++..+..++.||+.||.|||++||+||||||+|||++.                           
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~---------------------------  214 (343)
T cd05103         162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---------------------------  214 (343)
T ss_pred             hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC---------------------------
Confidence                        23677888999999999999999999999999999999654                           


Q ss_pred             CCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHH
Q 047395          260 SSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMM  333 (432)
Q Consensus       260 ~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~i  333 (432)
                      ++.++|+|||++......     .....++..|+|||++.+..++.++|||||||++|+|++ |..||............
T Consensus       215 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~  294 (343)
T cd05103         215 NNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  294 (343)
T ss_pred             CCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHH
Confidence            445677777766543211     111234677999999998889999999999999999997 99999764432211111


Q ss_pred             HHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCC
Q 047395          334 ERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRL  413 (432)
Q Consensus       334 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~  413 (432)
                      ... +.                    ..                          ..+...++.+.+++.+||+.||++||
T Consensus       295 ~~~-~~--------------------~~--------------------------~~~~~~~~~~~~~~~~cl~~~p~~Rp  327 (343)
T cd05103         295 LKE-GT--------------------RM--------------------------RAPDYTTPEMYQTMLDCWHGEPSQRP  327 (343)
T ss_pred             Hhc-cC--------------------CC--------------------------CCCCCCCHHHHHHHHHHccCChhhCc
Confidence            000 00                    00                          00112345588999999999999999


Q ss_pred             CHHHHhcC
Q 047395          414 TAHDALKH  421 (432)
Q Consensus       414 ta~elL~h  421 (432)
                      |+.|+++|
T Consensus       328 s~~eil~~  335 (343)
T cd05103         328 TFSELVEH  335 (343)
T ss_pred             CHHHHHHH
Confidence            99999976

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=9.3e-40  Score=318.08  Aligned_cols=249  Identities=20%  Similarity=0.295  Sum_probs=192.9

Q ss_pred             cCceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeech--hhhhHhHHHHHHHHHHHH-hcCCCCCceeEeeccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI--KKYREAAMTEIDVLELLK-RYDRSGSRCVQIRNWF  165 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~-~~~~~~~~iv~~~~~~  165 (432)
                      .++|.+.+.||+|+||.||+|++.     .+++.||+|+++..  ......+.+|+.++..+. |     +||+++++++
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H-----~niv~~~~~~  110 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPH-----LNIVNLLGAC  110 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCC-----CCeEEEEEEE
Confidence            457899999999999999999864     34568999999743  222346788999999886 5     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC-----------------------------------------------------
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNY-----------------------------------------------------  191 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~-----------------------------------------------------  191 (432)
                      ...+..++||||+ +|+|.+++.....                                                     
T Consensus       111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (401)
T cd05107         111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV  190 (401)
T ss_pred             ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence            9999999999999 9999999975421                                                     


Q ss_pred             -------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcE
Q 047395          192 -------------------------------------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI  228 (432)
Q Consensus       192 -------------------------------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  228 (432)
                                                                 ..+++..+..++.||+.||.|||+.+|+||||||+||
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~Ni  270 (401)
T cd05107         191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNV  270 (401)
T ss_pred             chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceE
Confidence                                                       1366778889999999999999999999999999999


Q ss_pred             EeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCCCCccch
Q 047395          229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCD  303 (432)
Q Consensus       229 li~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sD  303 (432)
                      |++.+                           ..++|+|||++.....     ......++..|+|||.+.+..++.++|
T Consensus       271 Ll~~~---------------------------~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  323 (401)
T cd05107         271 LICEG---------------------------KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSD  323 (401)
T ss_pred             EEeCC---------------------------CEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhH
Confidence            97654                           4466666666553221     112235678899999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchh
Q 047395          304 MWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL  382 (432)
Q Consensus       304 iwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (432)
                      ||||||++|||++ |..||......+........ +..                                          
T Consensus       324 vwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~-~~~------------------------------------------  360 (401)
T cd05107         324 VWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKR-GYR------------------------------------------  360 (401)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHc-CCC------------------------------------------
Confidence            9999999999998 89999765443332211110 000                                          


Q ss_pred             hhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       383 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                          ...+..++..+.+||.+||..+|.+||+++++++.
T Consensus       361 ----~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         361 ----MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             ----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                00112345668999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.1e-39  Score=302.56  Aligned_cols=245  Identities=24%  Similarity=0.360  Sum_probs=193.0

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCc---EEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      +.|++.+.||+|+||.||+|.+..+++   .||||+++..  ......+..|+.++..+.|     +||+++++++..+.
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~ni~~~~~~~~~~~   78 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH-----PNIIHLEGVVTKSR   78 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC-----cCcceEEEEECCCC
Confidence            468999999999999999999887665   6999998642  3345678889999988877     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ..++||||+ +++|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+||+++.++              
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~--------------  143 (269)
T cd05065          79 PVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNL--------------  143 (269)
T ss_pred             ceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCC--------------
Confidence            999999999 889999998654 4689999999999999999999999999999999999976544              


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCcc------cc--ccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN------YI--VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEA  319 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~--~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~  319 (432)
                                   .++|+|||.+........      ..  ..+..|+|||.+.+..++.++|||||||++|||++ |..
T Consensus       144 -------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~  210 (269)
T cd05065         144 -------------VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER  210 (269)
T ss_pred             -------------cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCC
Confidence                         455555555433221110      01  12457999999998889999999999999999886 999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||...+..+....+..... .|                                               ....++..+.+
T Consensus       211 p~~~~~~~~~~~~i~~~~~-~~-----------------------------------------------~~~~~~~~~~~  242 (269)
T cd05065         211 PYWDMSNQDVINAIEQDYR-LP-----------------------------------------------PPMDCPTALHQ  242 (269)
T ss_pred             CCCCCCHHHHHHHHHcCCc-CC-----------------------------------------------CcccCCHHHHH
Confidence            9987665544333321100 00                                               01234556889


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 047395          400 LLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~  420 (432)
                      ++.+||+.+|++||++++++.
T Consensus       243 li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         243 LMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=1.1e-39  Score=304.38  Aligned_cols=244  Identities=19%  Similarity=0.250  Sum_probs=184.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCc----EEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGE----TVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~----~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ++|++.+.||+|+||+||+|.+..+++    .+++|.+...  ......+..|+..+..+.|     +||+++++++.. 
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h-----~~iv~~~~~~~~-   80 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDH-----AYIVRLLGICPG-   80 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCC-----CCcceEEEEECC-
Confidence            478999999999999999999887776    4777776432  1222445556666666555     999999998754 


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      ...++++||+ +++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.+              
T Consensus        81 ~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~--------------  145 (279)
T cd05111          81 ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSD--------------  145 (279)
T ss_pred             CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC--------------
Confidence            4577899998 999999998754 368999999999999999999999999999999999996544              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALF  321 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf  321 (432)
                                   +.+||+|||.+......     .....++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus       146 -------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~  212 (279)
T cd05111         146 -------------SIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY  212 (279)
T ss_pred             -------------CcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCC
Confidence                         45666666665432211     122346778999999998889999999999999999998 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.........+.... .++                                               ....++..+.+++
T Consensus       213 ~~~~~~~~~~~~~~~~-~~~-----------------------------------------------~~~~~~~~~~~li  244 (279)
T cd05111         213 AGMRPHEVPDLLEKGE-RLA-----------------------------------------------QPQICTIDVYMVM  244 (279)
T ss_pred             CCCCHHHHHHHHHCCC-cCC-----------------------------------------------CCCCCCHHHHHHH
Confidence            8765443322221100 000                                               0012334577999


Q ss_pred             HHccccCCCCCCCHHHHhc
Q 047395          402 QGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~  420 (432)
                      .+||..||++|||+.|+++
T Consensus       245 ~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         245 VKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHHcCCCcccCcCHHHHHH
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.2e-39  Score=302.01  Aligned_cols=245  Identities=25%  Similarity=0.339  Sum_probs=192.5

Q ss_pred             CceEEEeeeecccceEEEEEEecCCC---cEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETG---ETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~---~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .+|++.+.||+|+||.||+|.+..++   ..+|+|.++..  ......+.+|+.++..++|     +||+++++++..++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~   78 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH-----PNIIHLEGVVTKSK   78 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCC-----CCcceEEEEEecCC
Confidence            57999999999999999999886544   37999988642  2344577889998888876     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ..|+||||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++.++              
T Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~--------------  143 (267)
T cd05066          79 PVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNL--------------  143 (267)
T ss_pred             ccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCC--------------
Confidence            999999999 899999998764 3689999999999999999999999999999999999976544              


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCc------cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEH------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALF  321 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf  321 (432)
                                   .++|+|||.+.......      ....++..|+|||.+.+..++.++|||||||++|++++ |..||
T Consensus       144 -------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~  210 (267)
T cd05066         144 -------------VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY  210 (267)
T ss_pred             -------------eEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCc
Confidence                         45555555544322111      11123567999999998889999999999999999886 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ......+....+.+... +|                                               ....++..+.+++
T Consensus       211 ~~~~~~~~~~~~~~~~~-~~-----------------------------------------------~~~~~~~~~~~li  242 (267)
T cd05066         211 WEMSNQDVIKAIEEGYR-LP-----------------------------------------------APMDCPAALHQLM  242 (267)
T ss_pred             ccCCHHHHHHHHhCCCc-CC-----------------------------------------------CCCCCCHHHHHHH
Confidence            87665444333322110 00                                               0113455688999


Q ss_pred             HHccccCCCCCCCHHHHhc
Q 047395          402 QGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~  420 (432)
                      .+||+.+|.+|||+.++++
T Consensus       243 ~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         243 LDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHcccCchhCCCHHHHHH
Confidence            9999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=1.6e-39  Score=304.59  Aligned_cols=255  Identities=28%  Similarity=0.434  Sum_probs=196.6

Q ss_pred             ceEEEeeeecccceEEEEEEec---CCCcEEEEEEeechh-----hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           96 RYKILRKIGEGTFGQVLDCLDR---ETGETVAIKVVRSIK-----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      +|++.+.||.|+||.||+|++.   .+++.||||+++...     ...+.+..|+.++..+.+    |++|+++++.+..
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~----~~~i~~~~~~~~~   76 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRR----CPFLVTLHYAFQT   76 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccC----Ccchhhhheeeec
Confidence            4889999999999999999864   467899999987432     223456788888888853    3999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      +...|+||||+ +++|.+++....  .+++..++.++.|++.||.|||+.|++||||||+||+++.              
T Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~--------------  140 (288)
T cd05583          77 DTKLHLILDYVNGGELFTHLYQRE--HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDS--------------  140 (288)
T ss_pred             CCEEEEEEecCCCCcHHHHHhhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--------------
Confidence            99999999999 889999997653  6899999999999999999999999999999999999654              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCC--CCccchHHHHHHHHHHHHhCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLG--WSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGvil~elltg~~p  320 (432)
                                   ++.++|+|||++......    .....|+..|+|||.+.+..  .+.++||||||+++|+|++|..|
T Consensus       141 -------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p  207 (288)
T cd05583         141 -------------EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASP  207 (288)
T ss_pred             -------------CCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCC
Confidence                         445677777766543221    12245788999999987765  68899999999999999999999


Q ss_pred             CCCCCcHHHHHHHHH-HhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          321 FQTHENLEHLAMMER-VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       321 f~~~~~~~~~~~i~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      |...........+.+ ....                                              .......++..+.+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~l~~  241 (288)
T cd05583         208 FTVDGEQNSQSEISRRILKS----------------------------------------------KPPFPKTMSAEARD  241 (288)
T ss_pred             cccCcccchHHHHHHHHHcc----------------------------------------------CCCCCcccCHHHHH
Confidence            964332111111111 0000                                              00011234556889


Q ss_pred             HHHHccccCCCCCCC---HHHHhcCCCCCCCcc
Q 047395          400 LLQGLLRYDPSSRLT---AHDALKHPFFTRDYY  429 (432)
Q Consensus       400 li~~~L~~dP~~R~t---a~elL~hp~f~~~~~  429 (432)
                      +|.+||+.||++|||   +.++|+||||+...+
T Consensus       242 li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~  274 (288)
T cd05583         242 FIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW  274 (288)
T ss_pred             HHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence            999999999999998   577899999987554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=1.2e-39  Score=305.79  Aligned_cols=245  Identities=19%  Similarity=0.324  Sum_probs=190.8

Q ss_pred             ceEEEeeeecccceEEEEEEecC-----CCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRE-----TGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      +|++.+.||+|+||.||+|++..     ....+|+|.+....  .....+.+|+.++..+.|     +||+++++.+...
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~   75 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNH-----PHVIKLYGACSQD   75 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCC-----CCEeeEEEEEecC
Confidence            47899999999999999998753     23579999886432  234567889999998877     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNN----------------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKP  225 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  225 (432)
                      +..++|+||+ +++|.+++....                      ...+++..+..++.|++.||.|||++||+||||||
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp  155 (290)
T cd05045          76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAA  155 (290)
T ss_pred             CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhh
Confidence            9999999999 899999987531                      12478899999999999999999999999999999


Q ss_pred             CcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCc
Q 047395          226 ENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSY  300 (432)
Q Consensus       226 ~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~  300 (432)
                      +|||+.++                           +.++|+|||++......     .....++..|+|||.+.+..++.
T Consensus       156 ~nill~~~---------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~  208 (290)
T cd05045         156 RNVLVAEG---------------------------RKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTT  208 (290)
T ss_pred             heEEEcCC---------------------------CcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcch
Confidence            99996544                           45666666665432211     11224567899999998888999


Q ss_pred             cchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcC
Q 047395          301 PCDMWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL  379 (432)
Q Consensus       301 ~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (432)
                      ++|||||||++|+|++ |..||.+.........+.....                                         
T Consensus       209 ~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-----------------------------------------  247 (290)
T cd05045         209 QSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYR-----------------------------------------  247 (290)
T ss_pred             HhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC-----------------------------------------
Confidence            9999999999999998 9999977654443322211100                                         


Q ss_pred             chhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       380 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                             ......++..+.++|.+||+.||++||++.++++
T Consensus       248 -------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         248 -------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             -------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                   0011234566889999999999999999999974

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=1.6e-39  Score=305.74  Aligned_cols=254  Identities=20%  Similarity=0.302  Sum_probs=191.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecC----------------CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE----------------TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSG  155 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~----------------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~  155 (432)
                      .++|++.++||+|+||.||+|.+..                ++..||+|+++..  ......+.+|+.++..++|     
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~-----   78 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKD-----   78 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC-----
Confidence            4579999999999999999986432                3457999998743  2344678899999999877     


Q ss_pred             CceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCC
Q 047395          156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNY---------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKP  225 (432)
Q Consensus       156 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  225 (432)
                      +||+++++++...+..++||||+ +++|.+++.....         ..+++..+..++.||+.||+|||++||+||||||
T Consensus        79 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp  158 (296)
T cd05095          79 PNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLAT  158 (296)
T ss_pred             CCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCCh
Confidence            99999999999999999999999 8999999986431         2367788999999999999999999999999999


Q ss_pred             CcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCc
Q 047395          226 ENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSY  300 (432)
Q Consensus       226 ~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~  300 (432)
                      +|||++.++                           .++|+|||++......     .....++..|+|||+..+..++.
T Consensus       159 ~Nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~  211 (296)
T cd05095         159 RNCLVGKNY---------------------------TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTT  211 (296)
T ss_pred             heEEEcCCC---------------------------CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccc
Confidence            999976544                           4566666655432211     11223467899999998888999


Q ss_pred             cchHHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhc
Q 047395          301 PCDMWSVGCILIELCS--GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK  378 (432)
Q Consensus       301 ~sDiwSlGvil~ellt--g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (432)
                      ++|||||||++|||++  |..||...+..+............        ..         ...                
T Consensus       212 ~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~~---------~~~----------------  258 (296)
T cd05095         212 ASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQ--------GR---------QVY----------------  258 (296)
T ss_pred             hhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhc--------cc---------ccc----------------
Confidence            9999999999999998  778997665544332221110000        00         000                


Q ss_pred             CchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                              ......+++.+.+||.+||+.||.+|||+.++++
T Consensus       259 --------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         259 --------LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             --------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                    0011234566889999999999999999999874

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=2.1e-39  Score=298.70  Aligned_cols=237  Identities=22%  Similarity=0.323  Sum_probs=183.8

Q ss_pred             eeecccceEEEEEEec--CCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEcc
Q 047395          102 KIGEGTFGQVLDCLDR--ETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEM  177 (432)
Q Consensus       102 ~lg~G~~g~V~~a~~~--~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  177 (432)
                      .||+|+||.||+|.+.  .++..||+|++....  ...+.+.+|+.+++.+.|     +||++++++++. ...++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~ii~~~~~~~~-~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDN-----PYIVRMIGVCEA-EALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCC-----CCeEEEEEEEcC-CCeEEEEEe
Confidence            4899999999999765  445679999986432  334568889999999877     999999998864 578999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccccc
Q 047395          178 L-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR  256 (432)
Q Consensus       178 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~  256 (432)
                      + +++|.+++.... ..+++..++.++.||+.||.|||++|++||||||+|||++.++                      
T Consensus        76 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~----------------------  132 (257)
T cd05115          76 ASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQH----------------------  132 (257)
T ss_pred             CCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCC----------------------
Confidence            9 899999997543 3689999999999999999999999999999999999976544                      


Q ss_pred             CCCCCCeEEeecCCcccccCCc------cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 047395          257 LPKSSAIKVIDFGSTAYEHQEH------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEH  329 (432)
Q Consensus       257 ~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~  329 (432)
                           .++|+|||++.......      ....++..|+|||++.+..++.++|||||||++|+|++ |..||......+.
T Consensus       133 -----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~  207 (257)
T cd05115         133 -----YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV  207 (257)
T ss_pred             -----cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH
Confidence                 45566666554322111      11123568999999998889999999999999999996 9999987665444


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+.....                                                .......++++.++|.+||..||
T Consensus       208 ~~~~~~~~~------------------------------------------------~~~~~~~~~~l~~li~~c~~~~~  239 (257)
T cd05115         208 MSFIEQGKR------------------------------------------------LDCPAECPPEMYALMKDCWIYKW  239 (257)
T ss_pred             HHHHHCCCC------------------------------------------------CCCCCCCCHHHHHHHHHHcCCCh
Confidence            332221100                                                00112345678899999999999


Q ss_pred             CCCCCHHHHhc
Q 047395          410 SSRLTAHDALK  420 (432)
Q Consensus       410 ~~R~ta~elL~  420 (432)
                      ++||++.++++
T Consensus       240 ~~Rp~~~~i~~  250 (257)
T cd05115         240 EDRPNFAKVEE  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.8e-39  Score=298.80  Aligned_cols=244  Identities=22%  Similarity=0.331  Sum_probs=194.3

Q ss_pred             eEEEeeeecccceEEEEEEecCCC----cEEEEEEeechhh--hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETG----ETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~----~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +++.+.||.|+||.||+|.+...+    ..||+|+++....  ....+..|+.++..+.|     +|++++++++...+.
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~   75 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDH-----PNIVKLLGVCTEEEP   75 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCC-----CchheEEEEEcCCCe
Confidence            357789999999999999998766    8999999975433  45678889999988866     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .+++|||+ +++|.+++.......+++..+..++.||+.||.|||+.|++|+||||+||+++.++               
T Consensus        76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~---------------  140 (258)
T smart00219       76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL---------------  140 (258)
T ss_pred             eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCC---------------
Confidence            99999999 89999999875532389999999999999999999999999999999999976544               


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCcc----ccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHN----YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH  324 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~  324 (432)
                                  .++|+|||.+........    ...++..|+|||.+.+..++.++|||||||++|+|++ |.+||...
T Consensus       141 ------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~  208 (258)
T smart00219      141 ------------VVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM  208 (258)
T ss_pred             ------------eEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence                        456666665544332211    1226788999999988889999999999999999998 88999875


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +.......+......                                                ......+..+.+++.+|
T Consensus       209 ~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~i~~~  240 (258)
T smart00219      209 SNEEVLEYLKKGYRL------------------------------------------------PKPENCPPEIYKLMLQC  240 (258)
T ss_pred             CHHHHHHHHhcCCCC------------------------------------------------CCCCcCCHHHHHHHHHH
Confidence            554444333221100                                                00112456688999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 047395          405 LRYDPSSRLTAHDALK  420 (432)
Q Consensus       405 L~~dP~~R~ta~elL~  420 (432)
                      |..||++|||+.|+++
T Consensus       241 l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      241 WAEDPEDRPTFSELVE  256 (258)
T ss_pred             CcCChhhCcCHHHHHh
Confidence            9999999999999985

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=1.9e-39  Score=310.55  Aligned_cols=248  Identities=19%  Similarity=0.310  Sum_probs=192.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCC-------CcEEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeec
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRET-------GETVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRN  163 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~-------~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~  163 (432)
                      ..+|++.+.||+|+||.||+|++...       +..||+|+++..  ......+.+|+.++..+ .|     +||+++++
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~~iv~~~~   85 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKH-----KNIINLLG   85 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCC-----CCeeeeeE
Confidence            45799999999999999999986432       236999988642  23345778899999888 45     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcE
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNN--------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI  228 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  228 (432)
                      ++...+.++++|||+ +++|.+++....              ...++...+..++.||+.||.|||++||+||||||+||
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  165 (334)
T cd05100          86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV  165 (334)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence            999999999999999 899999998642              12477888999999999999999999999999999999


Q ss_pred             EeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccch
Q 047395          229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCD  303 (432)
Q Consensus       229 li~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sD  303 (432)
                      |++.++                           .++|+|||+++.....     .....++..|+|||++.+..++.++|
T Consensus       166 ll~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  218 (334)
T cd05100         166 LVTEDN---------------------------VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  218 (334)
T ss_pred             EEcCCC---------------------------cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhh
Confidence            976544                           4555555555432211     11123356799999999988999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchh
Q 047395          304 MWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL  382 (432)
Q Consensus       304 iwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (432)
                      ||||||++|||++ |..||.+.+..+....+.....                                            
T Consensus       219 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--------------------------------------------  254 (334)
T cd05100         219 VWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHR--------------------------------------------  254 (334)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--------------------------------------------
Confidence            9999999999998 8999987665444333221100                                            


Q ss_pred             hhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       383 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                          .......+..+.+||.+||+.+|++|||+.|++++
T Consensus       255 ----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         255 ----MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             ----CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence                00012345568899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=2.8e-39  Score=326.07  Aligned_cols=272  Identities=22%  Similarity=0.319  Sum_probs=177.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCC----CcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc-----
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRET----GETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW-----  164 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~----~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~-----  164 (432)
                      .++|++.++||+|+||.||+|++..+    +..||||.+.....      .|......+.+..  +.++..+...     
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e~l~~~~--~~~~~~~~~~~~~~~  202 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNERVRRAC--PNSCADFVYGFLEPV  202 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHHHHHhhc--hhhHHHHHHhhhccc
Confidence            46899999999999999999999988    89999998754221      1222222222210  0112211111     


Q ss_pred             -cccCCeEEEEEccC-CCCHHHHHHhcCCC------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeccCC
Q 047395          165 -FDYRNHICIVFEML-GPSLYDFLRKNNYR------------------PFPVDLVREIGRQLLECVAFMHDLRLIHTDLK  224 (432)
Q Consensus       165 -~~~~~~~~lv~e~~-~~~L~~~l~~~~~~------------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  224 (432)
                       .......++|+||+ +++|.+++......                  ......+..++.||+.||.|||++||+|||||
T Consensus       203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK  282 (566)
T PLN03225        203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK  282 (566)
T ss_pred             ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence             23456899999999 89999998764310                  11234567899999999999999999999999


Q ss_pred             CCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC----CccccccCCCcchhHHHhCCC---
Q 047395          225 PENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ----EHNYIVSTRHYRAPEVILGLG---  297 (432)
Q Consensus       225 p~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~---  297 (432)
                      |+|||++.                          ..+.+||+|||+|.....    .....++|+.|+|||.+....   
T Consensus       283 P~NILl~~--------------------------~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~  336 (566)
T PLN03225        283 PQNIIFSE--------------------------GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTP  336 (566)
T ss_pred             HHHEEEeC--------------------------CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCC
Confidence            99999753                          235678888888764322    223467899999999774322   


Q ss_pred             -------------------CCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhcc
Q 047395          298 -------------------WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR  358 (432)
Q Consensus       298 -------------------~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~  358 (432)
                                         ++.++|||||||+||||+++..++.  +....+..+....+.....+.......       
T Consensus       337 ~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~-------  407 (566)
T PLN03225        337 SAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYDLVAWRKLVEPR-------  407 (566)
T ss_pred             CCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCcHHHHHHhhccc-------
Confidence                               3446799999999999999766543  222222222222222111111111000       


Q ss_pred             CCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          359 GRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                               . ..         ... ......+.......+||.+||+.||++|||+.|+|+||||++..
T Consensus       408 ---------~-~~---------~~~-~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~  457 (566)
T PLN03225        408 ---------A-SP---------DLR-RGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREG  457 (566)
T ss_pred             ---------c-ch---------hhh-hhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence                     0 00         000 00011123344567999999999999999999999999998754

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=1.9e-39  Score=304.03  Aligned_cols=247  Identities=20%  Similarity=0.300  Sum_probs=192.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecC-----CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE-----TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~-----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .++|++.+.||.|+||.||+|.+..     ++..||+|++...  ......+.+|+.++..+.|     +|++++++++.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h-----~~iv~~~~~~~   78 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDH-----PNIVKLLGVCA   78 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCC-----CchheEEEEEc
Confidence            4679999999999999999998753     5788999998643  2334568889999998877     99999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCC
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNN--------------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKP  225 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  225 (432)
                      .....|+||||+ +++|.+++....                    ...+++..++.++.||+.||.|||++|++||||||
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p  158 (288)
T cd05050          79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLAT  158 (288)
T ss_pred             CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccH
Confidence            999999999999 889999997532                    12478888999999999999999999999999999


Q ss_pred             CcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCc
Q 047395          226 ENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSY  300 (432)
Q Consensus       226 ~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~  300 (432)
                      +|||++.++                           .++|+|||++......     ......+..|+|||.+.+..++.
T Consensus       159 ~nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  211 (288)
T cd05050         159 RNCLVGENM---------------------------VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTT  211 (288)
T ss_pred             hheEecCCC---------------------------ceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCc
Confidence            999975544                           4556666655432111     11223456799999999889999


Q ss_pred             cchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcC
Q 047395          301 PCDMWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL  379 (432)
Q Consensus       301 ~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (432)
                      ++|||||||++|+|++ |..||.+.+..+....+....  .+                                      
T Consensus       212 ~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~--~~--------------------------------------  251 (288)
T cd05050         212 ESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGN--VL--------------------------------------  251 (288)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC--CC--------------------------------------
Confidence            9999999999999998 888997665544333221100  00                                      


Q ss_pred             chhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       380 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                              ......+..+.+||.+||+.||++|||+.|+++
T Consensus       252 --------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         252 --------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             --------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                    001234566889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.2e-40  Score=314.62  Aligned_cols=282  Identities=26%  Similarity=0.375  Sum_probs=213.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +-|..++.||-|+||+|.+++...|...||+|.+++...    .......|-.||.....     +.||+|+-.|++.+.
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn-----~WVVrLyySFQDkdn  703 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADN-----EWVVRLYYSFQDKDN  703 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCC-----cceEEEEEEeccCCc
Confidence            458899999999999999999999999999999875432    23345667777777655     899999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||+|+ ||++..+|.+.+  -|.|+.++.++..+..|+++.|..|+|||||||+||||+.+|++||+||||.--+..
T Consensus       704 LYFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW  781 (1034)
T KOG0608|consen  704 LYFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  781 (1034)
T ss_pred             eEEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecccccccee
Confidence            99999999 999999998876  699999999999999999999999999999999999999999999999999865443


Q ss_pred             Cccc--cc-----cCCC-CCCeEEeecCCccc--------cc--CCccccccCCCcchhHHHhCCCCCccchHHHHHHHH
Q 047395          250 DVNY--YK-----RLPK-SSAIKVIDFGSTAY--------EH--QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL  311 (432)
Q Consensus       250 ~~~~--~~-----~~~~-~~~~kl~Dfg~a~~--------~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil  311 (432)
                      ..+.  +.     +.+. ...-...|-+-+-.        ..  ......+||+.|+|||++....|+..+|+||.||||
T Consensus       782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil  861 (1034)
T KOG0608|consen  782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL  861 (1034)
T ss_pred             ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence            2211  11     0000 00011122221100        00  011336899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcc
Q 047395          312 IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD  391 (432)
Q Consensus       312 ~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (432)
                      |||+.|++||......+....+...                                     +..        +......
T Consensus       862 ~em~~g~~pf~~~tp~~tq~kv~nw-------------------------------------~~~--------l~~~~~~  896 (1034)
T KOG0608|consen  862 YEMLVGQPPFLADTPGETQYKVINW-------------------------------------RNF--------LHIPYQG  896 (1034)
T ss_pred             HHHhhCCCCccCCCCCcceeeeeeh-------------------------------------hhc--------ccccccc
Confidence            9999999999876543322221110                                     000        0111224


Q ss_pred             cchHHHHHHHHHccccCCCCCC---CHHHHhcCCCCCCCcc
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRL---TAHDALKHPFFTRDYY  429 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~---ta~elL~hp~f~~~~~  429 (432)
                      .++.++.+||.++. -+++.|+   .++|+.+||||+...|
T Consensus       897 ~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDf  936 (1034)
T KOG0608|consen  897 NLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDF  936 (1034)
T ss_pred             ccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccch
Confidence            66788899998754 5788888   4888999999998765

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=2.2e-39  Score=298.33  Aligned_cols=240  Identities=22%  Similarity=0.307  Sum_probs=188.6

Q ss_pred             eeeecccceEEEEEEecC-CC--cEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395          101 RKIGEGTFGQVLDCLDRE-TG--ETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~-~~--~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      +.||+|++|.||+|.+.. .+  ..||||.++...  .....+.+|+.++..++|     +||+++++.+.. ...++||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~-~~~~~v~   74 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDH-----ENLIRLYGVVLT-HPLMMVT   74 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCC-----CCccceeEEEcC-CeEEEEE
Confidence            468999999999999865 33  369999987533  345678889999999877     999999999887 8999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          176 EML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ||+ +++|.+++.......+++..++.++.|++.||.|||++|++|+||||+||+++.++.+|++|||            
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg------------  142 (257)
T cd05040          75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFG------------  142 (257)
T ss_pred             EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccc------------
Confidence            999 9999999987643468999999999999999999999999999999999997765555555554            


Q ss_pred             ccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                                     ++......      .....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..
T Consensus       143 ---------------~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  207 (257)
T cd05040         143 ---------------LMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS  207 (257)
T ss_pred             ---------------ccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                           44332211      112346778999999998889999999999999999999 99999876655


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+.......                                               ......+..+.+++.+||+.
T Consensus       208 ~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~~  240 (257)
T cd05040         208 QILKKIDKEGERL-----------------------------------------------ERPEACPQDIYNVMLQCWAH  240 (257)
T ss_pred             HHHHHHHhcCCcC-----------------------------------------------CCCccCCHHHHHHHHHHCCC
Confidence            5444332210000                                               00123455688999999999


Q ss_pred             CCCCCCCHHHHhc
Q 047395          408 DPSSRLTAHDALK  420 (432)
Q Consensus       408 dP~~R~ta~elL~  420 (432)
                      +|++|||+.++++
T Consensus       241 ~p~~Rps~~~~~~  253 (257)
T cd05040         241 NPADRPTFAALRE  253 (257)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999985

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=1e-40  Score=338.01  Aligned_cols=271  Identities=26%  Similarity=0.383  Sum_probs=196.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc----
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY----  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~----  167 (432)
                      ..+|+.++.||+||||.||+++++-+|+.||||.+...  ......+.+|+..|.+|.|     ||||+++..+..    
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnH-----pNVVRYysAWVEs~~~  552 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNH-----PNVVRYYSAWVESTAE  552 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCC-----cceeeeehhhhccCCc
Confidence            45688999999999999999999999999999998644  4556678899999999998     999987653311    


Q ss_pred             --------------------------------------------------------------------------------
Q 047395          168 --------------------------------------------------------------------------------  167 (432)
Q Consensus       168 --------------------------------------------------------------------------------  167 (432)
                                                                                                      
T Consensus       553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~  632 (1351)
T KOG1035|consen  553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN  632 (1351)
T ss_pred             cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence                                                                                            


Q ss_pred             ---------------------------C--------CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Q 047395          168 ---------------------------R--------NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA  211 (432)
Q Consensus       168 ---------------------------~--------~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~  211 (432)
                                                 +        ..+||-|||| ..+|.+++..+... -....++++++||++||.
T Consensus       633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGLa  711 (1351)
T KOG1035|consen  633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGLA  711 (1351)
T ss_pred             ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHHH
Confidence                                       0        1368999999 56666666665411 147889999999999999


Q ss_pred             HHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCccc-ccCCccccccCCCcchh
Q 047395          212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY-EHQEHNYIVSTRHYRAP  290 (432)
Q Consensus       212 ~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~-~~~~~~~~~gt~~y~aP  290 (432)
                      |+|++|||||||||.||++++++.+||+|||++...-...       ........+.+.-.- .....+..+||.-|+||
T Consensus       712 YIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~-------~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAP  784 (1351)
T KOG1035|consen  712 YIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENL-------ESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAP  784 (1351)
T ss_pred             HHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhh-------hhHhhccCccccccCCCCcccccccceeeeecH
Confidence            9999999999999999999999999999999874311100       011111111111111 11234557899999999


Q ss_pred             HHHhCCC---CCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH-hCCCCHHHHHhcCCcchhhhccCCcCCCCC
Q 047395          291 EVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERV-LGPIPQHMLKRVDKPAEKFVRRGRLDWPEG  366 (432)
Q Consensus       291 E~~~~~~---~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  366 (432)
                      |++.+..   |+.|+||||||||||||+   +||..  .++....+..+ -|.+|.+                     ..
T Consensus       785 Ell~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~T--sMERa~iL~~LR~g~iP~~---------------------~~  838 (1351)
T KOG1035|consen  785 ELLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGT--SMERASILTNLRKGSIPEP---------------------AD  838 (1351)
T ss_pred             HHhcccccccccchhhhHHHHHHHHHHh---ccCCc--hHHHHHHHHhcccCCCCCC---------------------cc
Confidence            9998754   999999999999999998   45754  23322222221 1223221                     00


Q ss_pred             CCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q 047395          367 ATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~  425 (432)
                      .                      ...--+.-..+|+.||+.||++||||.|+|++.||-
T Consensus       839 f----------------------~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  839 F----------------------FDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             c----------------------ccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence            0                      001112245899999999999999999999999996

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.2e-39  Score=301.34  Aligned_cols=243  Identities=23%  Similarity=0.300  Sum_probs=184.4

Q ss_pred             eeecccceEEEEEEecCC------------------------CcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCC
Q 047395          102 KIGEGTFGQVLDCLDRET------------------------GETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGS  156 (432)
Q Consensus       102 ~lg~G~~g~V~~a~~~~~------------------------~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~  156 (432)
                      .||+|+||.||+|....+                        ...||+|++.... .....+.+|+.++..+.|     +
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h-----~   76 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSH-----I   76 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCC-----C
Confidence            689999999999974321                        2358999886432 233456677777777776     9


Q ss_pred             ceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCc
Q 047395          157 RCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEY  235 (432)
Q Consensus       157 ~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~  235 (432)
                      ||+++++++......++||||+ +++|..++.... ..+++..+..++.||+.||+|||++||+||||||+|||++..+.
T Consensus        77 niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~  155 (274)
T cd05076          77 HLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGL  155 (274)
T ss_pred             CeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCc
Confidence            9999999999999999999999 899999987643 36899999999999999999999999999999999999875431


Q ss_pred             cccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHH
Q 047395          236 LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       236 ~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~el  314 (432)
                      .                    ......++++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|||
T Consensus       156 ~--------------------~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el  214 (274)
T cd05076         156 A--------------------EGTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI  214 (274)
T ss_pred             c--------------------cCccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence            1                    112345789999977543222 22457888999999876 4588999999999999998


Q ss_pred             H-hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccc
Q 047395          315 C-SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS  393 (432)
Q Consensus       315 l-tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (432)
                      + +|..||......+....+.. ....                                                 ....
T Consensus       215 ~~~g~~p~~~~~~~~~~~~~~~-~~~~-------------------------------------------------~~~~  244 (274)
T cd05076         215 CFDGEVPLKERTPSEKERFYEK-KHRL-------------------------------------------------PEPS  244 (274)
T ss_pred             HhCCCCCccccChHHHHHHHHh-ccCC-------------------------------------------------CCCC
Confidence            5 69999976544332211100 0000                                                 0112


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          394 AGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       394 ~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      +..+.++|.+||+.+|++|||+.++|++
T Consensus       245 ~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         245 CKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             ChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            3447899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-39  Score=299.97  Aligned_cols=241  Identities=22%  Similarity=0.287  Sum_probs=184.5

Q ss_pred             eeeecccceEEEEEEecCCCc--EEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGE--TVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~--~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||.||+|++..++.  .+|+|.++..  ....+.+..|+.++..+.+    |+||+++++++...+..|+|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~----h~~iv~~~~~~~~~~~~~lv~e   76 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH----HPNIINLLGACEHRGYLYLAIE   76 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhcc----CCCeeeEEEEEecCCCceEEEE
Confidence            368999999999999888775  4688887632  3344567889999988842    3999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCc
Q 047395          177 ML-GPSLYDFLRKNN--------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                      |+ +++|.+++....              ...+++..++.++.|++.||+|||++|++||||||+|||++.++       
T Consensus        77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~-------  149 (270)
T cd05047          77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY-------  149 (270)
T ss_pred             eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCC-------
Confidence            99 899999997643              12478999999999999999999999999999999999976544       


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CC
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GE  318 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~  318 (432)
                                          .++|+|||++.......  .....+..|+|||++.+..++.++|||||||++|||++ |.
T Consensus       150 --------------------~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~  209 (270)
T cd05047         150 --------------------VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG  209 (270)
T ss_pred             --------------------eEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCC
Confidence                                45555555543211111  11123567999999988889999999999999999997 99


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||.+.+..+....+.....                                                .......+..+.
T Consensus       210 ~pf~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~  241 (270)
T cd05047         210 TPYCGMTCAELYEKLPQGYR------------------------------------------------LEKPLNCDDEVY  241 (270)
T ss_pred             CCccccCHHHHHHHHhCCCC------------------------------------------------CCCCCcCCHHHH
Confidence            99976554433322211000                                                000113445688


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~  420 (432)
                      +|+.+||+.||.+|||+.++++
T Consensus       242 ~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         242 DLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHHHHcccChhhCCCHHHHHH
Confidence            9999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=2.8e-39  Score=300.83  Aligned_cols=248  Identities=19%  Similarity=0.287  Sum_probs=193.7

Q ss_pred             CceEEEeeeecccceEEEEEEecC-----CCcEEEEEEeechhh--hhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRE-----TGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~-----~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ++|++.+.||.|+||.||+|+...     +.+.|++|.+.....  ....+.+|+++++.+.|     +|++++++++..
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~   79 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSH-----KNVVRLLGLCRE   79 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCC-----cceeeeEEEECC
Confidence            579999999999999999999654     346899998864332  34678889999999987     999999999998


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNY-------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIP  239 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~  239 (432)
                      ....|+||||+ +++|.+++.....       ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+++ 
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l-  158 (275)
T cd05046          80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKV-  158 (275)
T ss_pred             CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEE-
Confidence            89999999999 8999999986541       15899999999999999999999999999999999999776555444 


Q ss_pred             CcccccCCCCCccccccCCCCCCeEEeecCCcccccC----CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHH
Q 047395          240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ----EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       240 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ell  315 (432)
                                                +|||++.....    ......++..|+|||.+.+..++.++|||||||++|+|+
T Consensus       159 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  212 (275)
T cd05046         159 --------------------------SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVF  212 (275)
T ss_pred             --------------------------cccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHH
Confidence                                      45444432211    112234567799999998888899999999999999999


Q ss_pred             h-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          316 S-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       316 t-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      + |..||...........+....                       ..|+                        ....++
T Consensus       213 ~~~~~p~~~~~~~~~~~~~~~~~-----------------------~~~~------------------------~~~~~~  245 (275)
T cd05046         213 TQGELPFYGLSDEEVLNRLQAGK-----------------------LELP------------------------VPEGCP  245 (275)
T ss_pred             hCCCCCccccchHHHHHHHHcCC-----------------------cCCC------------------------CCCCCC
Confidence            9 889997655444333221100                       0010                        112445


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      ..+.++|.+||+.||++|||+.|+++.
T Consensus       246 ~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         246 SRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            668899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-40  Score=320.71  Aligned_cols=202  Identities=26%  Similarity=0.393  Sum_probs=175.3

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC---
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN---  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~---  169 (432)
                      .-+...+.||+|+||.||+++++.+|+.||||.++..  ....+...+|++++++|+|     +|||++.++-+...   
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh-----~NIVk~f~iee~~~~~~   87 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNH-----PNIVKLFDIEETKFLGL   87 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCc-----hhhhhhcccCCccccCc
Confidence            3466778999999999999999999999999998753  4567889999999999998     99999999876543   


Q ss_pred             ---eEEEEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          170 ---HICIVFEML-GPSLYDFLRKNN-YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       170 ---~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                         ...+||||| ||+|...|.+-. ...+++.+++.++..+..||.|||++|||||||||.||++...           
T Consensus        88 ~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~G-----------  156 (732)
T KOG4250|consen   88 VTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIG-----------  156 (732)
T ss_pred             ccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeec-----------
Confidence               568999999 999999998632 2469999999999999999999999999999999999997542           


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                  .+.....||+|||.|+...+.  ....+||..|.+||++.. +.|+..+|.|||||++|+++||..||
T Consensus       157 ------------edgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF  224 (732)
T KOG4250|consen  157 ------------EDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPF  224 (732)
T ss_pred             ------------CCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCC
Confidence                        234566899999999876554  456799999999999995 78899999999999999999999999


Q ss_pred             CCC
Q 047395          322 QTH  324 (432)
Q Consensus       322 ~~~  324 (432)
                      ...
T Consensus       225 ~p~  227 (732)
T KOG4250|consen  225 IPF  227 (732)
T ss_pred             CcC
Confidence            654

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=4.5e-39  Score=298.62  Aligned_cols=245  Identities=24%  Similarity=0.326  Sum_probs=191.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCC---CcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRET---GETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~---~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|.+.+.||.|+||.||+|.+...   ...||||.....  ....+.+.+|+.+++.+.|     +||+++++++.. 
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h-----~~i~~~~~~~~~-   78 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDH-----PHIVKLIGVITE-   78 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCC-----CchhceeEEEcC-
Confidence            35699999999999999999987644   357999988643  3445678889999988877     999999998875 


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      ...|+||||+ +++|.+++.... ..+++..+..++.||+.||+|||++|++|+||||+|||++.++             
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~-------------  144 (270)
T cd05056          79 NPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD-------------  144 (270)
T ss_pred             CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCC-------------
Confidence            4578999999 899999998754 3589999999999999999999999999999999999976544             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQ  322 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~  322 (432)
                                    .++|+|||++.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus       145 --------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~  210 (270)
T cd05056         145 --------------CVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQ  210 (270)
T ss_pred             --------------CeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCC
Confidence                          45555555554322211    11234567999999988889999999999999999986 999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.+..+....+......                                                .....++..+.++|.
T Consensus       211 ~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~li~  242 (270)
T cd05056         211 GVKNNDVIGRIENGERL------------------------------------------------PMPPNCPPTLYSLMT  242 (270)
T ss_pred             CCCHHHHHHHHHcCCcC------------------------------------------------CCCCCCCHHHHHHHH
Confidence            77655444333211000                                                011244566889999


Q ss_pred             HccccCCCCCCCHHHHhc
Q 047395          403 GLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~  420 (432)
                      +||..+|++|||+.++++
T Consensus       243 ~~l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         243 KCWAYDPSKRPRFTELKA  260 (270)
T ss_pred             HHcCCChhhCcCHHHHHH
Confidence            999999999999999885

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-40  Score=314.71  Aligned_cols=247  Identities=24%  Similarity=0.336  Sum_probs=200.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCC----cEEEEEEeec----hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETG----ETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~----~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      .++-.+.++||+|+||.||+|..+..+    ..||||..+.    .......+++|.++++.++|     +|||+++|+.
T Consensus       156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H-----~NVVr~yGVa  230 (474)
T KOG0194|consen  156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNH-----PNVVRFYGVA  230 (474)
T ss_pred             ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCC-----CCEEEEEEEE
Confidence            455666799999999999999877542    2389999873    34566789999999999988     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      .....+++|||+| ||+|.++|++.+. .++..+...++.+.+.||+|||++++|||||-..|+|+..++          
T Consensus       231 ~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~----------  299 (474)
T KOG0194|consen  231 VLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKG----------  299 (474)
T ss_pred             cCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCC----------
Confidence            9999999999999 9999999998763 599999999999999999999999999999999999976544          


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCCc--c-ccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--N-YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~-~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                       .+||+|||+++......  . ...-...|+|||.+....|+.++|||||||++||+++ |..|
T Consensus       300 -----------------~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~P  362 (474)
T KOG0194|consen  300 -----------------VVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEP  362 (474)
T ss_pred             -----------------eEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCC
Confidence                             45666666655443111  1 1123567999999999999999999999999999998 8999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+....+..+.|.......+                                               .+...+..+..+
T Consensus       363 y~g~~~~~v~~kI~~~~~r~~-----------------------------------------------~~~~~p~~~~~~  395 (474)
T KOG0194|consen  363 YPGMKNYEVKAKIVKNGYRMP-----------------------------------------------IPSKTPKELAKV  395 (474)
T ss_pred             CCCCCHHHHHHHHHhcCccCC-----------------------------------------------CCCCCHHHHHHH
Confidence            999988877776643222111                                               112345557889


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      +.+||..||++|||+.++.+
T Consensus       396 ~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  396 MKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HHHhccCChhhccCHHHHHH
Confidence            99999999999999988763

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.8e-39  Score=302.28  Aligned_cols=260  Identities=24%  Similarity=0.357  Sum_probs=189.5

Q ss_pred             ceEEEeeeecccceEEEEEEe----cCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC-
Q 047395           96 RYKILRKIGEGTFGQVLDCLD----RETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR-  168 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~----~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~-  168 (432)
                      -|++++.||+|+||.||+|..    ..++..||+|.++..  ......+.+|+.+++.+.|     +|++++++++... 
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~   79 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH-----ENIVKYKGICTEDG   79 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCC-----CCeeeeeeEEecCC
Confidence            478999999999999999974    456889999998643  2334578899999999877     9999999988764 


Q ss_pred             -CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          169 -NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       169 -~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                       ...++||||+ +++|.+++.+.. ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+          
T Consensus        80 ~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~----------  148 (284)
T cd05079          80 GNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQV----------  148 (284)
T ss_pred             CCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCE----------
Confidence             5789999999 999999997653 358999999999999999999999999999999999997665544          


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                       +|+|||++......      .....++..|+|||++.+..++.++|||||||++|+|+++..|
T Consensus       149 -----------------~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~  211 (284)
T cd05079         149 -----------------KIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDS  211 (284)
T ss_pred             -----------------EECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCC
Confidence                             55555544332211      1123467789999999988899999999999999999998776


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      +......     .....++.....                        ............    ........++..+.+|
T Consensus       212 ~~~~~~~-----~~~~~~~~~~~~------------------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~l  258 (284)
T cd05079         212 ESSPMTL-----FLKMIGPTHGQM------------------------TVTRLVRVLEEG----KRLPRPPNCPEEVYQL  258 (284)
T ss_pred             Cccccch-----hhhhcccccccc------------------------cHHHHHHHHHcC----ccCCCCCCCCHHHHHH
Confidence            5432110     011111111000                        000000000000    0011123467789999


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 047395          401 LQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~h  421 (432)
                      |.+||+.||++|||+.+++++
T Consensus       259 i~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         259 MRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHHHccCCcccCcCHHHHHHH
Confidence            999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=4.2e-39  Score=302.54  Aligned_cols=260  Identities=16%  Similarity=0.237  Sum_probs=182.4

Q ss_pred             cCceecCceEEEeeeecccceEEEEEEecCC---CcEEEEEEeechhhh--hHh-------HHHHHHHHHHHHhcCCCCC
Q 047395           89 LGENLTSRYKILRKIGEGTFGQVLDCLDRET---GETVAIKVVRSIKKY--REA-------AMTEIDVLELLKRYDRSGS  156 (432)
Q Consensus        89 ~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~---~~~vaiK~~~~~~~~--~~~-------~~~E~~~l~~l~~~~~~~~  156 (432)
                      +.+...++|++.+.||+|+||+||+|.+..+   +..+|+|+.......  .+.       ...++..+..+  ....|+
T Consensus         6 ~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~--~~~~h~   83 (294)
T PHA02882          6 LIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNI--HNIDHL   83 (294)
T ss_pred             eeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHh--ccCCCC
Confidence            3455668999999999999999999998877   677888864321110  000       01112222222  223568


Q ss_pred             ceeEeecccccCC----eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec
Q 047395          157 RCVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       157 ~iv~~~~~~~~~~----~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  232 (432)
                      +++++++......    ..++++|++..++.+.+....  ..++..++.++.||+.||+|||+++|+||||||+|||++.
T Consensus        84 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~  161 (294)
T PHA02882         84 GIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDG  161 (294)
T ss_pred             CCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence            8999887654332    457899998888888877643  4688899999999999999999999999999999999654


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCccccc----------CCccccccCCCcchhHHHhCCCCCccc
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH----------QEHNYIVSTRHYRAPEVILGLGWSYPC  302 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~s  302 (432)
                                                 ++.++|+|||+|+...          .......||+.|+|||++.+..++.++
T Consensus       162 ---------------------------~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~  214 (294)
T PHA02882        162 ---------------------------NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRG  214 (294)
T ss_pred             ---------------------------CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHH
Confidence                                       4456667777665321          111234699999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchh
Q 047395          303 DMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL  382 (432)
Q Consensus       303 DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (432)
                      |||||||++|||++|..||.+.............      .+......        +                       
T Consensus       215 DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~------~~~~~~~~--------~-----------------------  257 (294)
T PHA02882        215 DLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC------DFIKRLHE--------G-----------------------  257 (294)
T ss_pred             HHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH------HHHHHhhh--------h-----------------------
Confidence            9999999999999999999876432221111100      00000000        0                       


Q ss_pred             hhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       383 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                          .......+..+.+++..|+..+|++||+.+++++
T Consensus       258 ----~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        258 ----KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             ----hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                0011234566889999999999999999999875

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=3.3e-39  Score=299.31  Aligned_cols=245  Identities=20%  Similarity=0.313  Sum_probs=190.7

Q ss_pred             eeeecccceEEEEEEecCCC------cEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395          101 RKIGEGTFGQVLDCLDRETG------ETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +.||.|+||.||+|.+....      +.+|||.+....  .....+.+|+.+++.+.|     +||+++++++......+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~   75 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNH-----PNIVKLLGVCLLNEPQY   75 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCC-----CCeeeEeeeecCCCCeE
Confidence            36899999999999876543      689999876432  345567889999998877     99999999999889999


Q ss_pred             EEEccC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          173 IVFEML-GPSLYDFLRKNN-----YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      +||||+ +++|.+++....     ...+++..+..++.||+.||.|||+++++|+||||+||+++.++            
T Consensus        76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~------------  143 (269)
T cd05044          76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKG------------  143 (269)
T ss_pred             EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCC------------
Confidence            999999 899999997532     12478899999999999999999999999999999999987643            


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                .+....++|+|||++......     .....++..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       144 ----------~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p  213 (269)
T cd05044         144 ----------YDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP  213 (269)
T ss_pred             ----------CCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence                      112336777777776543211     112245678999999999889999999999999999998 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...+..+....+.....                                                .......+..+.+|
T Consensus       214 ~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~l  245 (269)
T cd05044         214 YPALNNQEVLQHVTAGGR------------------------------------------------LQKPENCPDKIYQL  245 (269)
T ss_pred             CcccCHHHHHHHHhcCCc------------------------------------------------cCCcccchHHHHHH
Confidence            986665444333211000                                                00112345668899


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      |.+||+.+|.+||+++++++
T Consensus       246 i~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         246 MTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHHcCCCcccCCCHHHHHH
Confidence            99999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=4.2e-39  Score=297.48  Aligned_cols=244  Identities=20%  Similarity=0.254  Sum_probs=185.0

Q ss_pred             eeeecccceEEEEEEecCC------------CcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395          101 RKIGEGTFGQVLDCLDRET------------GETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~------------~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      +.||+|+||.||+|.....            ...||+|++.... .....+..|+.++..+.|     |||+++++++..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~h-----p~iv~~~~~~~~   75 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSH-----KHIVLLYGVCVR   75 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCC-----CCEeeEEEEEec
Confidence            3689999999999985322            2368999876433 233456777888888876     999999999998


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ....++||||+ +++|..++.... ..+++..+..++.||+.||+|||++||+||||||+|||+..++..          
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~----------  144 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGID----------  144 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCcc----------
Confidence            88999999999 889988887643 468999999999999999999999999999999999998765421          


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHh-CCCCCccchHHHHHHHHHHHH-hCCCCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELC-SGEALFQTH  324 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGvil~ell-tg~~pf~~~  324 (432)
                                ......++++|||.+...... ....++..|+|||++. +..++.++|||||||++|||+ +|..||...
T Consensus       145 ----------~~~~~~~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~  213 (262)
T cd05077         145 ----------GECGPFIKLSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK  213 (262)
T ss_pred             ----------CCCCceeEeCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc
Confidence                      112334889999987654322 2346788999999987 456889999999999999998 588888754


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      ...+..... .  +..                                               ......+..+.+||.+|
T Consensus       214 ~~~~~~~~~-~--~~~-----------------------------------------------~~~~~~~~~~~~li~~c  243 (262)
T cd05077         214 TLAEKERFY-E--GQC-----------------------------------------------MLVTPSCKELADLMTHC  243 (262)
T ss_pred             chhHHHHHH-h--cCc-----------------------------------------------cCCCCChHHHHHHHHHH
Confidence            332211100 0  000                                               00012234578999999


Q ss_pred             cccCCCCCCCHHHHhcC
Q 047395          405 LRYDPSSRLTAHDALKH  421 (432)
Q Consensus       405 L~~dP~~R~ta~elL~h  421 (432)
                      |+.||.+||++.+|+++
T Consensus       244 l~~dp~~Rp~~~~il~~  260 (262)
T cd05077         244 MNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             cCCChhhCcCHHHHHHh
Confidence            99999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.5e-39  Score=294.69  Aligned_cols=238  Identities=24%  Similarity=0.357  Sum_probs=187.9

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      ++||.|+||.||+|.+.. ++.||+|+++...  .....+.+|+++++.+.|     +||+++++++......++||||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~~v~e~~   74 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDH-----PNIVKLIGVCVQKQPIYIVMELV   74 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCC-----CCeEEEEEEEecCCCeEEEEEcC
Confidence            479999999999999877 9999999886432  245678889999998877     99999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccC
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL  257 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  257 (432)
                       +++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+|||++.+                        
T Consensus        75 ~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~------------------------  129 (251)
T cd05041          75 PGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGEN------------------------  129 (251)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCC------------------------
Confidence             899999997654 358999999999999999999999999999999999997554                        


Q ss_pred             CCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHH
Q 047395          258 PKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLA  331 (432)
Q Consensus       258 ~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~  331 (432)
                         +.++|+|||.+.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |..||..........
T Consensus       130 ---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~  206 (251)
T cd05041         130 ---NVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE  206 (251)
T ss_pred             ---CcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHH
Confidence               456666666554332111     11223567999999998889999999999999999999 889997665433332


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+..... .                                               ...+..+..+.++|.+||+.+|.+
T Consensus       207 ~~~~~~~-~-----------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~  238 (251)
T cd05041         207 RIESGYR-M-----------------------------------------------PAPQLCPEEIYRLMLQCWAYDPEN  238 (251)
T ss_pred             HHhcCCC-C-----------------------------------------------CCCccCCHHHHHHHHHHhccChhh
Confidence            2211100 0                                               001234556889999999999999


Q ss_pred             CCCHHHHhc
Q 047395          412 RLTAHDALK  420 (432)
Q Consensus       412 R~ta~elL~  420 (432)
                      |||+.|+++
T Consensus       239 Rp~~~ell~  247 (251)
T cd05041         239 RPSFSEIYN  247 (251)
T ss_pred             CcCHHHHHH
Confidence            999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.1e-39  Score=298.41  Aligned_cols=245  Identities=21%  Similarity=0.324  Sum_probs=191.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCc----EEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGE----TVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~----~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ..+|++.+.||+|+||.||+|.+..++.    .||+|.++...  .....+.+|+.+++.+.|     +|++++++++..
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~   80 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDH-----PHVVRLLGICLS   80 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCC-----CCcceEEEEEec
Confidence            3579999999999999999999876665    58999876432  344567889999998876     999999998876


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                       ...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++            
T Consensus        81 -~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~------------  146 (279)
T cd05057          81 -SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQ------------  146 (279)
T ss_pred             -CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCC------------
Confidence             7899999999 999999998754 3589999999999999999999999999999999999976544            


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCCcc-----ccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN-----YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                     .++|+|||.+........     ...++..|+|||.+....++.++|||||||++||+++ |..|
T Consensus       147 ---------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p  211 (279)
T cd05057         147 ---------------HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKP  211 (279)
T ss_pred             ---------------eEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCC
Confidence                           455555555543322111     1123567999999988889999999999999999998 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+....+....+.... ..+                                               .+...+..+.++
T Consensus       212 ~~~~~~~~~~~~~~~~~-~~~-----------------------------------------------~~~~~~~~~~~~  243 (279)
T cd05057         212 YEGIPAVEIPDLLEKGE-RLP-----------------------------------------------QPPICTIDVYMV  243 (279)
T ss_pred             CCCCCHHHHHHHHhCCC-CCC-----------------------------------------------CCCCCCHHHHHH
Confidence            98766544433322110 000                                               011234457899


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      |.+||..||++|||+.++++
T Consensus       244 ~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         244 LVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             HHHHcCCChhhCCCHHHHHH
Confidence            99999999999999998874

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=7.4e-39  Score=298.81  Aligned_cols=247  Identities=17%  Similarity=0.229  Sum_probs=191.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecC----CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE----TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .++|++.+.||+|+||.||+|.+..    ++..|++|+++..  ......+.+|+.+++.+.|     +||+++++++..
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h-----~ni~~~~~~~~~   79 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH-----QNILPILHVCIE   79 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCC-----CCCCeEEEEEec
Confidence            4689999999999999999999876    3578999988643  3334567789988888877     999999997654


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccC
Q 047395          168 -RNHICIVFEML-GPSLYDFLRKNNY------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIP  239 (432)
Q Consensus       168 -~~~~~lv~e~~-~~~L~~~l~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~  239 (432)
                       +...++++||+ +++|.+++.....      ..+++..+..++.||+.||+|||+++++||||||+||+++.++.    
T Consensus        80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~----  155 (280)
T cd05043          80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQ----  155 (280)
T ss_pred             CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCc----
Confidence             57789999999 8999999976432      35899999999999999999999999999999999999765544    


Q ss_pred             CcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHH
Q 047395          240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       240 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~el  314 (432)
                                             +||+|||+++.....     .....++..|+|||++.+..++.++|||||||++|++
T Consensus       156 -----------------------~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el  212 (280)
T cd05043         156 -----------------------VKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWEL  212 (280)
T ss_pred             -----------------------EEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHH
Confidence                                   555555554432111     1112356679999999988899999999999999999


Q ss_pred             Hh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccc
Q 047395          315 CS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS  393 (432)
Q Consensus       315 lt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (432)
                      ++ |+.||...+..+....+..... +                                               .....+
T Consensus       213 ~~~g~~p~~~~~~~~~~~~~~~~~~-~-----------------------------------------------~~~~~~  244 (280)
T cd05043         213 MTLGQTPYVEIDPFEMAAYLKDGYR-L-----------------------------------------------AQPINC  244 (280)
T ss_pred             hcCCCCCcCcCCHHHHHHHHHcCCC-C-----------------------------------------------CCCCcC
Confidence            99 9999987655443322211100 0                                               001134


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          394 AGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       394 ~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      ++.+.+++.+||..||++|||+.++++
T Consensus       245 ~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         245 PDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            556889999999999999999999984

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=9.5e-39  Score=298.69  Aligned_cols=261  Identities=25%  Similarity=0.331  Sum_probs=187.3

Q ss_pred             CceEEEeeeecccceEEEEEE----ecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc--c
Q 047395           95 SRYKILRKIGEGTFGQVLDCL----DRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD--Y  167 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~----~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~--~  167 (432)
                      .+|++.+.||+|+||.||+|.    +..+++.||+|.+.... .....+.+|++++..++|     +|++++++++.  .
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~~   78 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQH-----DNIVKYKGVCYSAG   78 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC-----CCeeEEEEEEccCC
Confidence            479999999999999999997    44578899999986432 334567889999999877     99999998754  3


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ...+++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.           
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~-----------  146 (284)
T cd05081          79 RRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENR-----------  146 (284)
T ss_pred             CCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCe-----------
Confidence            45789999999 999999997653 35899999999999999999999999999999999999766554           


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCCcc------ccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN------YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                      ++|+|||++........      ...++..|+|||++.+..++.++|||||||++|||++|..+
T Consensus       147 ----------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~  210 (284)
T cd05081         147 ----------------VKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDK  210 (284)
T ss_pred             ----------------EEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCc
Confidence                            45555554443221111      11234469999999988899999999999999999998877


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      +..... .....    .+....                       .......+.......    ........++..+.+|
T Consensus       211 ~~~~~~-~~~~~----~~~~~~-----------------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l  258 (284)
T cd05081         211 SCSPPA-EFMRM----MGNDKQ-----------------------GQMIVYHLIELLKNN----GRLPAPPGCPAEIYAI  258 (284)
T ss_pred             CCCcch-hhhhh----cccccc-----------------------cccchHHHHHHHhcC----CcCCCCCCCCHHHHHH
Confidence            643221 11100    000000                       000000000000000    0011123456779999


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      |.+||..+|++|||+.|+++
T Consensus       259 i~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         259 MKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHHHccCChhhCCCHHHHHH
Confidence            99999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=1.3e-38  Score=292.08  Aligned_cols=238  Identities=22%  Similarity=0.339  Sum_probs=186.0

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      +.||.|+||.||+|... ++..+|+|+++..  ......+.+|++++..+.|     +|++++++++...+..++||||+
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~lv~e~~   74 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDH-----PNIVKLIGVCTQRQPIYIVMELV   74 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCC-----CCcCeEEEEEecCCccEEEEECC
Confidence            36899999999999854 6889999998643  2334567889999888876     99999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccC
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL  257 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~  257 (432)
                       +++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++                       
T Consensus        75 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~-----------------------  130 (250)
T cd05085          75 PGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENN-----------------------  130 (250)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCC-----------------------
Confidence             999999987654 3589999999999999999999999999999999999976544                       


Q ss_pred             CCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 047395          258 PKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAM  332 (432)
Q Consensus       258 ~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~  332 (432)
                          .++|+|||++.......    ....++..|+|||++.+..++.++|||||||++|++++ |..||...........
T Consensus       131 ----~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~  206 (250)
T cd05085         131 ----VLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQ  206 (250)
T ss_pred             ----eEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence                45555665554322111    11234567999999988889999999999999999998 9999987654433322


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      +.....                                                ......++..+.+++.+||+.+|++|
T Consensus       207 ~~~~~~------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R  238 (250)
T cd05085         207 VEKGYR------------------------------------------------MSCPQKCPDDVYKVMQRCWDYKPENR  238 (250)
T ss_pred             HHcCCC------------------------------------------------CCCCCCCCHHHHHHHHHHcccCcccC
Confidence            211100                                                00112345668899999999999999


Q ss_pred             CCHHHHhc
Q 047395          413 LTAHDALK  420 (432)
Q Consensus       413 ~ta~elL~  420 (432)
                      ||+.++++
T Consensus       239 p~~~~l~~  246 (250)
T cd05085         239 PKFSELQK  246 (250)
T ss_pred             CCHHHHHH
Confidence            99999975

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=6.4e-39  Score=295.53  Aligned_cols=242  Identities=22%  Similarity=0.295  Sum_probs=187.4

Q ss_pred             eeeecccceEEEEEEecCCC----------cEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395          101 RKIGEGTFGQVLDCLDRETG----------ETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~----------~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +.||+|+||.||+|.+..++          ..+++|++.........+.+|+.+++.+.|     +||+++++++.. ..
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~-~~   74 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH-----KHLVKLYGVCVR-DE   74 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCC-----cchhheeeEEec-CC
Confidence            46899999999999998776          358888876544436677888888888877     999999998877 77


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.-             
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~-------------  140 (259)
T cd05037          75 NIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLN-------------  140 (259)
T ss_pred             cEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccc-------------
Confidence            89999999 999999998754 268999999999999999999999999999999999998754310             


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC--CCCccchHHHHHHHHHHHHh-CCCCCCCCCc
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILIELCS-GEALFQTHEN  326 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvil~ellt-g~~pf~~~~~  326 (432)
                             ......++|+|||++..... .....++..|+|||++.+.  .++.++|||||||++|+|++ |..||...+.
T Consensus       141 -------~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~  212 (259)
T cd05037         141 -------EGYVPFIKLSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS  212 (259)
T ss_pred             -------cCCceeEEeCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc
Confidence                   01223588899988776443 2334567889999999876  68899999999999999999 5788866543


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+...... ...                       ..+                          ......+.++|.+||.
T Consensus       213 ~~~~~~~~-~~~-----------------------~~~--------------------------~~~~~~~~~li~~~l~  242 (259)
T cd05037         213 SEKERFYQ-DQH-----------------------RLP--------------------------MPDCAELANLINQCWT  242 (259)
T ss_pred             hhHHHHHh-cCC-----------------------CCC--------------------------CCCchHHHHHHHHHhc
Confidence            22111110 000                       000                          0111457899999999


Q ss_pred             cCCCCCCCHHHHhc
Q 047395          407 YDPSSRLTAHDALK  420 (432)
Q Consensus       407 ~dP~~R~ta~elL~  420 (432)
                      .||.+|||+.++++
T Consensus       243 ~~p~~Rpt~~~il~  256 (259)
T cd05037         243 YDPTKRPSFRAILR  256 (259)
T ss_pred             cChhhCCCHHHHHH
Confidence            99999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-39  Score=318.81  Aligned_cols=258  Identities=25%  Similarity=0.421  Sum_probs=214.4

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-----
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-----  167 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-----  167 (432)
                      ..+.|+|.+.||.|.+|.||+++.+.+++..|+||+.......+.+..|.++|+.+.+    |||++.++++|..     
T Consensus        17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~----hpnv~~fyg~~~k~~~~~   92 (953)
T KOG0587|consen   17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSH----HPNVATFYGAFIKKDPGN   92 (953)
T ss_pred             CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccC----CCCcceEEEEEEEecCCC
Confidence            3567999999999999999999999999999999998888888889999999998876    5999999998853     


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ++.+||||||| |||.-|+++......+.|+.+..|++.++.||.+||.+.++|||||-.|||++               
T Consensus        93 ~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT---------------  157 (953)
T KOG0587|consen   93 GDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT---------------  157 (953)
T ss_pred             CCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe---------------
Confidence            47899999999 99999999987777899999999999999999999999999999999999955               


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCC-----CCCccchHHHHHHHHHHHHhCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGL-----GWSYPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-----~~~~~sDiwSlGvil~elltg~  318 (432)
                                  .++.|||+|||.+.....   ...+.+||+.|||||++...     .|+..+|+||||++..||.-|.
T Consensus       158 ------------~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~  225 (953)
T KOG0587|consen  158 ------------ENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGA  225 (953)
T ss_pred             ------------ccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCC
Confidence                        455677777777655433   34567999999999999643     3778899999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      +|+...-..-.+.   .+...+|+.                                           ...+..++..+.
T Consensus       226 PPl~DmHPmraLF---~IpRNPPPk-------------------------------------------Lkrp~kWs~~Fn  259 (953)
T KOG0587|consen  226 PPLCDMHPMRALF---LIPRNPPPK-------------------------------------------LKRPKKWSKKFN  259 (953)
T ss_pred             CCccCcchhhhhc---cCCCCCCcc-------------------------------------------ccchhhHHHHHH
Confidence            9997654432221   112222211                                           112345677789


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +||..||..|-.+||+..++|+|||++..
T Consensus       260 dFIs~cL~Kd~e~RP~~~~ll~hpFi~e~  288 (953)
T KOG0587|consen  260 DFISTCLVKDYEQRPSTEELLKHPFITEQ  288 (953)
T ss_pred             HHHHHHHhhccccCcchhhhccCCccccc
Confidence            99999999999999999999999999843

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=1.9e-38  Score=294.24  Aligned_cols=244  Identities=20%  Similarity=0.259  Sum_probs=179.2

Q ss_pred             eeeecccceEEEEEEecC--CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRE--TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~--~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      ++||+|+||.||+|....  ....+|+|.+...  ......+.+|+.+++.++|     +||+++++.+......|+|||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h-----~nii~~~~~~~~~~~~~lv~e   75 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNH-----PNVLQCLGQCIESIPYLLVLE   75 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCC-----CCcceEEEEECCCCceEEEEE
Confidence            368999999999996432  3457888877532  2334567788888888766     999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          177 ML-GPSLYDFLRKNNY---RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      |+ +++|.+++.....   ...++..+..++.||+.||+|||++||+||||||+|||++.+                   
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~-------------------  136 (269)
T cd05042          76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTAD-------------------  136 (269)
T ss_pred             eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCC-------------------
Confidence            99 8999999987532   234678889999999999999999999999999999996554                   


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhC-------CCCCccchHHHHHHHHHHHHh-CCC
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILG-------LGWSYPCDMWSVGCILIELCS-GEA  319 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~sDiwSlGvil~ellt-g~~  319 (432)
                              +.+||+|||++......     .....++..|+|||++..       ..++.++|||||||++|||++ |..
T Consensus       137 --------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~  208 (269)
T cd05042         137 --------LSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQ  208 (269)
T ss_pred             --------CcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCC
Confidence                    45666666655432111     122345678999999853       346789999999999999999 888


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||....+.+.+..+......                      .++.                     ......++..+.+
T Consensus       209 p~~~~~~~~~~~~~~~~~~~----------------------~~~~---------------------~~~~~~~~~~~~~  245 (269)
T cd05042         209 PYPDLSDEQVLKQVVREQDI----------------------KLPK---------------------PQLDLKYSDRWYE  245 (269)
T ss_pred             CCCcCCHHHHHHHHhhccCc----------------------cCCC---------------------CcccccCCHHHHH
Confidence            99876655443332221110                      0000                     0011234555778


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 047395          400 LLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~  420 (432)
                      ++..|+ .||++|||++++++
T Consensus       246 ~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         246 VMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHh-cCcccccCHHHHHH
Confidence            999998 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=7.9e-39  Score=301.80  Aligned_cols=259  Identities=24%  Similarity=0.315  Sum_probs=208.1

Q ss_pred             ecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           88 ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        88 ~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      +..+-..++..+.++||+|-||.|.+|.-. .+..||+|+++..  ...+..+.+|+++|.+|+|     |||++++++|
T Consensus       531 al~EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkh-----PNIveLvGVC  604 (807)
T KOG1094|consen  531 ALVEFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKH-----PNIVELLGVC  604 (807)
T ss_pred             chhhcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCC-----CCeeEEEeee
Confidence            334445678999999999999999999743 4689999999853  3445789999999999988     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ..++.+|+|+||+ .|+|.+|+..+.-..+..+....|+.||+.|++||.+.++|||||.+.|+|               
T Consensus       605 ~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcL---------------  669 (807)
T KOG1094|consen  605 VQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCL---------------  669 (807)
T ss_pred             ecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhcccccccee---------------
Confidence            9999999999999 999999999875333455667779999999999999999999999999999               


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCCccc-----cccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh--C
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY-----IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS--G  317 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt--g  317 (432)
                                  ++.++++||+|||+++..-....+     .+-...|||||.+...+++.+||+|+||+++||+++  .
T Consensus       670 ------------v~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~  737 (807)
T KOG1094|consen  670 ------------VDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCR  737 (807)
T ss_pred             ------------ecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHh
Confidence                        556777888888888754333222     234678999999999999999999999999999765  8


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ..||....+.+........+...+..                                         .....+.-++..+
T Consensus       738 e~Py~~lt~e~vven~~~~~~~~~~~-----------------------------------------~~l~~P~~cp~~l  776 (807)
T KOG1094|consen  738 EQPYSQLTDEQVVENAGEFFRDQGRQ-----------------------------------------VVLSRPPACPQGL  776 (807)
T ss_pred             hCchhhhhHHHHHHhhhhhcCCCCcc-----------------------------------------eeccCCCcCcHHH
Confidence            89998877766555443333222110                                         1112334667778


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      .+||.+||..|-.+|||.+++-.
T Consensus       777 yelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  777 YELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             HHHHHHHhchhhhcCCCHHHHHH
Confidence            99999999999999999999853

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=9.7e-41  Score=287.22  Aligned_cols=258  Identities=24%  Similarity=0.401  Sum_probs=201.3

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++.+-+..||.|+||+|++-.++.+|+..|||.++...  +...+++.|.+...+-..    .||||++++..-.++..|
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~----cp~IVkfyGa~F~EGdcW  139 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSN----CPNIVKFYGALFSEGDCW  139 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcC----CcHHHHHhhhhhcCCcee
Confidence            45666789999999999999999999999999997543  445566777766554433    499999999988889999


Q ss_pred             EEEccCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          173 IVFEMLGPSLYDFLRK---NNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      +.||++..||..+.+.   .....++|..+-.|....+.||+||-+ ..||||||||+|||+                  
T Consensus       140 iCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl------------------  201 (361)
T KOG1006|consen  140 ICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL------------------  201 (361)
T ss_pred             eeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE------------------
Confidence            9999998888766542   222469999999999999999999985 699999999999994                  


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhC--CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                               +..+.+||||||.+......  .+.-+|-..|||||.+..  ..|+-+|||||||++|||+.||+.||.+-
T Consensus       202 ---------dr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w  272 (361)
T KOG1006|consen  202 ---------DRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW  272 (361)
T ss_pred             ---------ecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH
Confidence                     55677888888887654432  233578889999999964  35899999999999999999999999875


Q ss_pred             CcHHHHHHHHHHh-CCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          325 ENLEHLAMMERVL-GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       325 ~~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      ++  ++.++..+. |.+|.-..                                         ....-..+..+..+|.-
T Consensus       273 ~s--vfeql~~Vv~gdpp~l~~-----------------------------------------~~~~~~~s~~~~~fint  309 (361)
T KOG1006|consen  273 DS--VFEQLCQVVIGDPPILLF-----------------------------------------DKECVHYSFSMVRFINT  309 (361)
T ss_pred             HH--HHHHHHHHHcCCCCeecC-----------------------------------------cccccccCHHHHHHHHH
Confidence            54  333333332 22321100                                         00112456678999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCC
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ||.+|-+.||...+++++||+..
T Consensus       310 Cl~Kd~~~Rpky~~Lk~~~fyr~  332 (361)
T KOG1006|consen  310 CLIKDRSDRPKYDDLKKFPFYRM  332 (361)
T ss_pred             HhhcccccCcchhhhhcCchhhh
Confidence            99999999999999999999865

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.9e-38  Score=299.57  Aligned_cols=245  Identities=21%  Similarity=0.295  Sum_probs=188.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCc----EEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGE----TVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~----~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ++|++.+.||+|+||.||+|.+..++.    .||+|.+....  .....+.+|+.++..+.|     +||+++++++...
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h-----~niv~~~~~~~~~   81 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH-----PHLVRLLGVCLSP   81 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCC-----CCcccEEEEEcCC
Confidence            578999999999999999999887776    57888876432  223457788888888876     9999999988654


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                       ..++++||+ +|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.+              
T Consensus        82 -~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~--------------  145 (303)
T cd05110          82 -TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSP--------------  145 (303)
T ss_pred             -CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCC--------------
Confidence             467899999 899999998754 358999999999999999999999999999999999996544              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALF  321 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf  321 (432)
                                   +.+||+|||++.......     ....++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus       146 -------------~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~  212 (303)
T cd05110         146 -------------NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY  212 (303)
T ss_pred             -------------CceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence                         446666666655432211     12235678999999998889999999999999999997 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+....+....+.. ...++                                               ....++..+.++|
T Consensus       213 ~~~~~~~~~~~~~~-~~~~~-----------------------------------------------~~~~~~~~~~~li  244 (303)
T cd05110         213 DGIPTREIPDLLEK-GERLP-----------------------------------------------QPPICTIDVYMVM  244 (303)
T ss_pred             CCCCHHHHHHHHHC-CCCCC-----------------------------------------------CCCCCCHHHHHHH
Confidence            76554332222111 00000                                               0112344578999


Q ss_pred             HHccccCCCCCCCHHHHhcC
Q 047395          402 QGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~h  421 (432)
                      .+||..||++||++.++++.
T Consensus       245 ~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         245 VKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHcCCChhhCcCHHHHHHH
Confidence            99999999999999998763

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-39  Score=327.29  Aligned_cols=247  Identities=21%  Similarity=0.334  Sum_probs=204.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCC-----cEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETG-----ETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~-----~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ..+.++.+.||+|.||.||.|......     ..||||.+++.  ......+.+|..++..+.|     ||||++++++-
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~H-----pNiv~liGv~l  765 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDH-----PNIVSLIGVCL  765 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC-----cceeeEEEeec
Confidence            456888999999999999999876433     24999998754  4566789999999999988     99999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCC
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNN-----YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      .....+|++||| ||+|..||++.+     ...++..+...++.||++|+.||+++++|||||-..|+|++         
T Consensus       766 ~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~---------  836 (1025)
T KOG1095|consen  766 DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD---------  836 (1025)
T ss_pred             CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec---------
Confidence            999999999999 999999999862     13588999999999999999999999999999999999954         


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCCcccc-----ccCCCcchhHHHhCCCCCccchHHHHHHHHHHHH
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI-----VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ell  315 (432)
                                        ....+||+|||+|+.......+.     .-...|||||.+....++.|+|||||||+|||++
T Consensus       837 ------------------~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEif  898 (1025)
T KOG1095|consen  837 ------------------ERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIF  898 (1025)
T ss_pred             ------------------ccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHH
Confidence                              45677777777777433222111     1245799999999999999999999999999999


Q ss_pred             h-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          316 S-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       316 t-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      | |..||...++.+.+....+.                      ++++                          .+..++
T Consensus       899 slG~~PY~~~~n~~v~~~~~~g----------------------gRL~--------------------------~P~~CP  930 (1025)
T KOG1095|consen  899 SLGATPYPSRSNFEVLLDVLEG----------------------GRLD--------------------------PPSYCP  930 (1025)
T ss_pred             hCCCCCCCCcchHHHHHHHHhC----------------------CccC--------------------------CCCCCC
Confidence            9 99999998888776544332                      1222                          234677


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      +.+.++|.+||+.+|++||++..|++
T Consensus       931 ~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  931 EKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             hHHHHHHHHHccCChhhCccHHHHHh
Confidence            88999999999999999999999986

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=2.1e-38  Score=292.74  Aligned_cols=239  Identities=18%  Similarity=0.248  Sum_probs=179.1

Q ss_pred             eeeecccceEEEEEEecC---CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc-cCCeEEEE
Q 047395          101 RKIGEGTFGQVLDCLDRE---TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD-YRNHICIV  174 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~---~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~-~~~~~~lv  174 (432)
                      +.||+|+||.||+|.+..   .+..||+|.+...  ....+.+.+|+.+++.++|     +|++++++++. .++..++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~~~~~~lv   75 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSH-----PNVLSLLGICLPSEGSPLVV   75 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCC-----CCcceEEEEeecCCCCcEEE
Confidence            368999999999998653   3457999988532  2334567788888888776     99999999754 45678999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+ +++|.+++.... ..+++..+..++.||+.||.|||+.+|+||||||+|||++.++.                  
T Consensus        76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~------------------  136 (262)
T cd05058          76 LPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFT------------------  136 (262)
T ss_pred             EecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCc------------------
Confidence            9999 899999998654 34677888999999999999999999999999999999765554                  


Q ss_pred             cccCCCCCCeEEeecCCcccccC-------CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCC
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQ-------EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHE  325 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~  325 (432)
                               +||+|||++.....       ......++..|+|||.+.+..++.++|||||||++|||++ |.+||...+
T Consensus       137 ---------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~  207 (262)
T cd05058         137 ---------VKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD  207 (262)
T ss_pred             ---------EEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence                     45555554432211       1112345678999999988889999999999999999999 566776554


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....+..... +                                               ......+..+.+++.+||
T Consensus       208 ~~~~~~~~~~~~~-~-----------------------------------------------~~~~~~~~~~~~li~~cl  239 (262)
T cd05058         208 SFDITVYLLQGRR-L-----------------------------------------------LQPEYCPDPLYEVMLSCW  239 (262)
T ss_pred             HHHHHHHHhcCCC-C-----------------------------------------------CCCCcCCHHHHHHHHHHc
Confidence            4333222211000 0                                               001123456889999999


Q ss_pred             ccCCCCCCCHHHHhc
Q 047395          406 RYDPSSRLTAHDALK  420 (432)
Q Consensus       406 ~~dP~~R~ta~elL~  420 (432)
                      ..+|++||++.++++
T Consensus       240 ~~~p~~Rp~~~~il~  254 (262)
T cd05058         240 HPKPEMRPTFSELVS  254 (262)
T ss_pred             CCChhhCCCHHHHHH
Confidence            999999999999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=3.1e-38  Score=292.90  Aligned_cols=243  Identities=19%  Similarity=0.235  Sum_probs=179.5

Q ss_pred             eeeecccceEEEEEEec--CCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDR--ETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~--~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      +.||+|+||.||+|...  .++..+|+|.++...  .....+.+|+.++..++|     +||+++++++......++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~~lv~e   75 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQH-----SNLLQCLGQCTEVTPYLLVME   75 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEcCCCCcEEEEE
Confidence            36899999999999754  345689999886432  233467789999988877     999999999998889999999


Q ss_pred             cC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          177 ML-GPSLYDFLRKNNY---RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      |+ +++|.+++.....   ...++..++.++.|++.||.|||+.|++||||||+||+++.++                  
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~------------------  137 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADL------------------  137 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC------------------
Confidence            99 8999999975421   2456778889999999999999999999999999999976544                  


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCC-------CCCccchHHHHHHHHHHHHh-CCC
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGL-------GWSYPCDMWSVGCILIELCS-GEA  319 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~sDiwSlGvil~ellt-g~~  319 (432)
                               .++|+|||.+......     .....++..|+|||++.+.       .++.++|||||||++|||++ |..
T Consensus       138 ---------~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~  208 (269)
T cd05087         138 ---------TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQ  208 (269)
T ss_pred             ---------cEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCC
Confidence                     4555555555332111     1223567889999998643       35789999999999999996 999


Q ss_pred             CCCCCCcHHHHHHHHHHh-CCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          320 LFQTHENLEHLAMMERVL-GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      ||......+......... ...+                       .                     .......+..+.
T Consensus       209 p~~~~~~~~~~~~~~~~~~~~~~-----------------------~---------------------~~~~~~~~~~~~  244 (269)
T cd05087         209 PYRHLSDEQVLTYTVREQQLKLP-----------------------K---------------------PRLKLPLSDRWY  244 (269)
T ss_pred             CCCCCChHHHHHHHhhcccCCCC-----------------------C---------------------CccCCCCChHHH
Confidence            997665544322211100 0000                       0                     000112345578


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~  420 (432)
                      ++|..|+ .+|++|||++||+.
T Consensus       245 ~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         245 EVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHHHh-cCcccCCCHHHHHH
Confidence            9999998 68999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=3.1e-38  Score=292.83  Aligned_cols=247  Identities=21%  Similarity=0.385  Sum_probs=189.8

Q ss_pred             ceEEEeeeecccceEEEEEEecC-CCcEEEEEEeechh-----------hhhHhHHHHHHHHHH-HHhcCCCCCceeEee
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRE-TGETVAIKVVRSIK-----------KYREAAMTEIDVLEL-LKRYDRSGSRCVQIR  162 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~-~~~~vaiK~~~~~~-----------~~~~~~~~E~~~l~~-l~~~~~~~~~iv~~~  162 (432)
                      .|++.+.||+|+||.||+|.+.. +++.+|+|.+....           .....+..|+.++.. +.     |+||++++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~-----h~~i~~~~   75 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR-----HPNIVRYY   75 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCC-----CCCeeeEE
Confidence            37889999999999999999887 67899999875321           112334456665543 33     49999999


Q ss_pred             cccccCCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCcccc
Q 047395          163 NWFDYRNHICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKI  238 (432)
Q Consensus       163 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~  238 (432)
                      +++..++..++||||+ +++|.+++...  ....+++..++.++.|++.||.|||+ .||+|+||||+||+++.      
T Consensus        76 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~------  149 (269)
T cd08528          76 KTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE------  149 (269)
T ss_pred             eeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC------
Confidence            9999999999999999 89999988542  22468999999999999999999996 78999999999999654      


Q ss_pred             CCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh
Q 047395          239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       239 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt  316 (432)
                                           ++.++|+|||.+......  .....|+..|+|||.+.+..++.++||||||+++|+|++
T Consensus       150 ---------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~  208 (269)
T cd08528         150 ---------------------DDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCT  208 (269)
T ss_pred             ---------------------CCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHh
Confidence                                 445677777766543322  223468889999999998889999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       317 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      |..||...+.......+.......                                               .....+++.
T Consensus       209 g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~  241 (269)
T cd08528         209 LQPPFYSTNMLSLATKIVEAVYEP-----------------------------------------------LPEGMYSED  241 (269)
T ss_pred             CCCcccccCHHHHHHHHhhccCCc-----------------------------------------------CCcccCCHH
Confidence            999997655443333222111000                                               001134556


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcC
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      +.++|.+||+.||++||++.|+.++
T Consensus       242 l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         242 VTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             HHHHHHHHCCCCCccCCCHHHHHHH
Confidence            8899999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=3e-38  Score=295.08  Aligned_cols=260  Identities=24%  Similarity=0.345  Sum_probs=191.9

Q ss_pred             CceEEEeeeecccceEEEEEEec----CCCcEEEEEEeechhh--hhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDR----ETGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-  167 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-  167 (432)
                      ..|++.+.||+|+||.||+|...    .++..||||+++....  ....+.+|+++++.+.|     +||+++++++.. 
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~-----~~i~~~~~~~~~~   78 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDH-----ENIVKYKGVCEKP   78 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCC-----CChheEEeeeecC
Confidence            46888999999999999999864    3478999999975444  36678899999998877     999999998876 


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          168 -RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       168 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                       ....++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+|+||||+||+++.+            
T Consensus        79 ~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~------------  145 (284)
T cd05038          79 GGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESE------------  145 (284)
T ss_pred             CCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC------------
Confidence             56899999999 899999998754 358999999999999999999999999999999999997554            


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCCcc------ccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN------YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                     +.++|+|||.+........      ...++..|+|||.+.+..++.++|||||||++|||++|..
T Consensus       146 ---------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~  210 (284)
T cd05038         146 ---------------DLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD  210 (284)
T ss_pred             ---------------CCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCC
Confidence                           4566666666554332111      1234556999999998889999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||........     ...++..                        .......+...+...    ........++..+.+
T Consensus       211 p~~~~~~~~~-----~~~~~~~------------------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  257 (284)
T cd05038         211 PSQSPPAEFL-----RMIGIAQ------------------------GQMIVTRLLELLKEG----ERLPRPPSCPDEVYD  257 (284)
T ss_pred             Ccccccchhc-----ccccccc------------------------ccccHHHHHHHHHcC----CcCCCCccCCHHHHH
Confidence            9865332110     0000000                        000000000000000    000111234567899


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 047395          400 LLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~  420 (432)
                      |+.+||+.||++|||+.|+++
T Consensus       258 li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         258 LMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHHHhccChhhCCCHHHHHH
Confidence            999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-39  Score=304.58  Aligned_cols=246  Identities=21%  Similarity=0.338  Sum_probs=211.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      ..+.....+||-|.||.||.|+++.-.-.||||.++.+....+.|+.|..+++.++|     ||+|+++++|..+..+||
T Consensus       266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikH-----pNLVqLLGVCT~EpPFYI  340 (1157)
T KOG4278|consen  266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQLLGVCTHEPPFYI  340 (1157)
T ss_pred             chheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcC-----ccHHHHhhhhccCCCeEE
Confidence            445667789999999999999999989999999999888889999999999999998     999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      |+||| .|+|.+||++.....++.-.++.++.||..|++||..+++|||||-..|+||.                     
T Consensus       341 iTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg---------------------  399 (1157)
T KOG4278|consen  341 ITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---------------------  399 (1157)
T ss_pred             EEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc---------------------
Confidence            99999 99999999988767788889999999999999999999999999999999954                     


Q ss_pred             ccccCCCCCCeEEeecCCcccccCCc-ccccc---CCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQEH-NYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~g---t~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                            .+..+|++|||+++...... +...|   ...|.|||-+....++.|+|||+|||+|||+.| |..||.+.+-.
T Consensus       400 ------EnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS  473 (1157)
T KOG4278|consen  400 ------ENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS  473 (1157)
T ss_pred             ------ccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH
Confidence                  45567777777776543322 22233   567999999999999999999999999999998 99999988776


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .++..+++.                                                +.+..+..|++.+.+|++.||+|
T Consensus       474 qVY~LLEkg------------------------------------------------yRM~~PeGCPpkVYeLMraCW~W  505 (1157)
T KOG4278|consen  474 QVYGLLEKG------------------------------------------------YRMDGPEGCPPKVYELMRACWNW  505 (1157)
T ss_pred             HHHHHHhcc------------------------------------------------ccccCCCCCCHHHHHHHHHHhcC
Confidence            666554332                                                22334567888899999999999


Q ss_pred             CCCCCCCHHHHh
Q 047395          408 DPSSRLTAHDAL  419 (432)
Q Consensus       408 dP~~R~ta~elL  419 (432)
                      +|.+||+..|+-
T Consensus       506 sPsDRPsFaeiH  517 (1157)
T KOG4278|consen  506 SPSDRPSFAEIH  517 (1157)
T ss_pred             CcccCccHHHHH
Confidence            999999988764

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-40  Score=301.02  Aligned_cols=262  Identities=24%  Similarity=0.404  Sum_probs=206.9

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--------hhhHhHHHHHHHHHHHHhcCCCCCceeEe
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--------KYREAAMTEIDVLELLKRYDRSGSRCVQI  161 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~  161 (432)
                      -..+.+||-++..||+|||+.||+|.+....+.||||+-...+        .......+|.+|.+.|.|     +.||++
T Consensus       458 HptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDH-----pRIVKl  532 (775)
T KOG1151|consen  458 HPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDH-----PRIVKL  532 (775)
T ss_pred             CcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCc-----ceeeee
Confidence            3456789999999999999999999999999999999864322        233457789998888887     999999


Q ss_pred             ecccc-cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--CcEeccCCCCcEEeecCCccc
Q 047395          162 RNWFD-YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL--RLIHTDLKPENILFVSPEYLK  237 (432)
Q Consensus       162 ~~~~~-~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~NIli~~~~~~k  237 (432)
                      +++|. +.+.+|-|+||| |.+|.-||+++.  .+++.+++.|+.||+.||.||.+.  .|||-||||.|||+.+     
T Consensus       533 YDyfslDtdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~-----  605 (775)
T KOG1151|consen  533 YDYFSLDTDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVN-----  605 (775)
T ss_pred             eeeeeeccccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEec-----
Confidence            99987 456799999999 889988898875  799999999999999999999975  6999999999999865     


Q ss_pred             cCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCc----------cccccCCCcchhHHHhCC----CCCccch
Q 047395          238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH----------NYIVSTRHYRAPEVILGL----GWSYPCD  303 (432)
Q Consensus       238 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~----~~~~~sD  303 (432)
                                         -...+.+||+|||+++......          +...||.+|++||.+.-.    +.+.++|
T Consensus       606 -------------------GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVD  666 (775)
T KOG1151|consen  606 -------------------GTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVD  666 (775)
T ss_pred             -------------------CcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCcccccee
Confidence                               2345667777777776543321          235789999999998644    3788999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchh
Q 047395          304 MWSVGCILIELCSGEALFQTHENLE-HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL  382 (432)
Q Consensus       304 iwSlGvil~elltg~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (432)
                      |||+|||+|..+.|+.||....... .+..- .                   ++......+                   
T Consensus       667 VWSvGVIFyQClYGrKPFGhnqsQQdILqeN-T-------------------IlkAtEVqF-------------------  707 (775)
T KOG1151|consen  667 VWSVGVIFYQCLYGRKPFGHNQSQQDILQEN-T-------------------ILKATEVQF-------------------  707 (775)
T ss_pred             eEeeehhhhhhhccCCCCCCchhHHHHHhhh-c-------------------hhcceeccC-------------------
Confidence            9999999999999999997543322 11110 0                   000111111                   


Q ss_pred             hhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       383 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                           +..+.++.++.+||++||++--++|....++-.||||.-
T Consensus       708 -----P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  708 -----PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             -----CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence                 122456778999999999999999999999999999964

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.4e-37  Score=288.40  Aligned_cols=243  Identities=21%  Similarity=0.248  Sum_probs=179.2

Q ss_pred             eeeecccceEEEEEEecCC--CcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRET--GETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~--~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      ++||+|+||.||+|.....  ...+++|.++..  ....+.+.+|+.++..++|     +|++++++.+......|+|||
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h-----~~iv~~~~~~~~~~~~~lv~e   75 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQH-----PNILQCLGQCVEAIPYLLVFE   75 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCC-----cchhheEEEecCCCccEEEEe
Confidence            3699999999999975433  235667766532  2345678888888888877     999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          177 ML-GPSLYDFLRKNN--YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |+ +++|.+++.+..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++                   
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~-------------------  136 (268)
T cd05086          76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDL-------------------  136 (268)
T ss_pred             cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCc-------------------
Confidence            99 899999998642  13467778889999999999999999999999999999975544                   


Q ss_pred             cccCCCCCCeEEeecCCccccc-----CCccccccCCCcchhHHHhC-------CCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEH-----QEHNYIVSTRHYRAPEVILG-------LGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                              .++|+|||++....     .......++..|+|||++..       ..++.++|||||||++|||++ |..|
T Consensus       137 --------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p  208 (268)
T cd05086         137 --------TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQP  208 (268)
T ss_pred             --------cEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCC
Confidence                    46666666543211     11223467889999999853       235789999999999999997 6778


Q ss_pred             CCCCCcHHHHHHHHHHhC-CCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          321 FQTHENLEHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      |...+..+.+..+..... ..+.                                            .......++.+.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~  244 (268)
T cd05086         209 YSHLSDREVLNHVIKDQQVKLFK--------------------------------------------PQLELPYSERWYE  244 (268)
T ss_pred             CCCCCHHHHHHHHHhhcccccCC--------------------------------------------CccCCCCcHHHHH
Confidence            877665554443322110 0000                                            0001234556789


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 047395          400 LLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~  420 (432)
                      +|..|| .+|++|||++++++
T Consensus       245 l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         245 VLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHh-hCcccCCCHHHHHH
Confidence            999999 68999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=8.1e-38  Score=290.59  Aligned_cols=244  Identities=15%  Similarity=0.220  Sum_probs=185.0

Q ss_pred             eEEEeeeecccceEEEEEEecC---CCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC-
Q 047395           97 YKILRKIGEGTFGQVLDCLDRE---TGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN-  169 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~---~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~-  169 (432)
                      |++.+.||+|+||.||+|.+..   +++.||||+++..   ....+.+.+|+++++.+.|     +|++++++++.... 
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~   75 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH-----PNVIKLIGVSLRSRA   75 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCC-----CCcceEEEEEccCCC
Confidence            6778899999999999998653   5789999998642   2345567889999988877     99999999875432 


Q ss_pred             -----eEEEEEccC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccC
Q 047395          170 -----HICIVFEML-GPSLYDFLRKNN----YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIP  239 (432)
Q Consensus       170 -----~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~  239 (432)
                           ..++++||+ +++|.+++....    ...++...++.++.||+.||+|||++||+||||||+||+++.++     
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~-----  150 (273)
T cd05074          76 KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENM-----  150 (273)
T ss_pred             CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCC-----
Confidence                 347889999 899998875422    12478899999999999999999999999999999999976544     


Q ss_pred             CcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHH
Q 047395          240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       240 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~el  314 (432)
                                            .++|+|||.+......     .....+++.|++||.+.+..++.++|||||||++|+|
T Consensus       151 ----------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el  208 (273)
T cd05074         151 ----------------------TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEI  208 (273)
T ss_pred             ----------------------CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHH
Confidence                                  4555566555432211     1122346779999999988899999999999999999


Q ss_pred             Hh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccc
Q 047395          315 CS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS  393 (432)
Q Consensus       315 lt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (432)
                      ++ |.+||.+.+..+....+.... ..                     .                          .....
T Consensus       209 ~~~g~~p~~~~~~~~~~~~~~~~~-~~---------------------~--------------------------~~~~~  240 (273)
T cd05074         209 MTRGQTPYAGVENSEIYNYLIKGN-RL---------------------K--------------------------QPPDC  240 (273)
T ss_pred             hhCCCCCCCCCCHHHHHHHHHcCC-cC---------------------C--------------------------CCCCC
Confidence            99 899997665543332221110 00                     0                          01134


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          394 AGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       394 ~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      +..+.+++.+||+.+|++|||+.++++
T Consensus       241 ~~~~~~l~~~~l~~~p~~Rps~~~~~~  267 (273)
T cd05074         241 LEDVYELMCQCWSPEPKCRPSFQHLRD  267 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            456889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.3e-37  Score=306.51  Aligned_cols=270  Identities=21%  Similarity=0.381  Sum_probs=184.3

Q ss_pred             cCceEEEeeeecccceEEEEEEec----------------CCCcEEEEEEeechhh---------------hhHhHHHHH
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR----------------ETGETVAIKVVRSIKK---------------YREAAMTEI  142 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~----------------~~~~~vaiK~~~~~~~---------------~~~~~~~E~  142 (432)
                      .++|++.++||+|+||+||+|...                ..++.||||.++....               ..+....|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            568999999999999999999752                2356799999863221               112334567


Q ss_pred             HHHHHHHhcCCCCCceeEeeccccc--------CCeEEEEEccC-CCCHHHHHHhcCC----------------------
Q 047395          143 DVLELLKRYDRSGSRCVQIRNWFDY--------RNHICIVFEML-GPSLYDFLRKNNY----------------------  191 (432)
Q Consensus       143 ~~l~~l~~~~~~~~~iv~~~~~~~~--------~~~~~lv~e~~-~~~L~~~l~~~~~----------------------  191 (432)
                      ..+..++|....+.+++++++++..        .+..++||||+ +++|.+++.....                      
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            7777777744445567777777653        35689999999 9999999874310                      


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCc
Q 047395          192 RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST  271 (432)
Q Consensus       192 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  271 (432)
                      ..+++..++.++.|++.||.|||+++|+||||||+|||++.                           +..++|+|||++
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~---------------------------~~~~kL~DFGla  356 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTV---------------------------DGQVKIIDFGAA  356 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECC---------------------------CCcEEEEeCcCc
Confidence            12456778899999999999999999999999999999654                           445677777766


Q ss_pred             ccccCCc--c--ccccCCCcchhHHHhCCC--------------------C--CccchHHHHHHHHHHHHhCCC-CCCCC
Q 047395          272 AYEHQEH--N--YIVSTRHYRAPEVILGLG--------------------W--SYPCDMWSVGCILIELCSGEA-LFQTH  324 (432)
Q Consensus       272 ~~~~~~~--~--~~~gt~~y~aPE~~~~~~--------------------~--~~~sDiwSlGvil~elltg~~-pf~~~  324 (432)
                      .......  .  ...+|+.|+|||++....                    +  ..+.||||+||++|+|++|.. ||...
T Consensus       357 ~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~  436 (507)
T PLN03224        357 VDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANI  436 (507)
T ss_pred             cccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccch
Confidence            4432211  1  123478999999986432                    1  134799999999999999875 77543


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhh--hccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKF--VRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ......  +..            .......+  .....                        ......+..++..+|||.
T Consensus       437 ~~f~~~--~~~------------~~~~~~~~r~~~~~~------------------------~~~~~~d~~s~~~~dLi~  478 (507)
T PLN03224        437 RLFNTE--LRQ------------YDNDLNRWRMYKGQK------------------------YDFSLLDRNKEAGWDLAC  478 (507)
T ss_pred             hhhhhH--Hhh------------ccchHHHHHhhcccC------------------------CCcccccccChHHHHHHH
Confidence            211100  000            00000000  00000                        011123456778999999


Q ss_pred             HccccCC---CCCCCHHHHhcCCCCCCCc
Q 047395          403 GLLRYDP---SSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       403 ~~L~~dP---~~R~ta~elL~hp~f~~~~  428 (432)
                      +||..+|   .+|+|++|+|+||||...+
T Consensus       479 ~LL~~~~~~~~~RlSa~eaL~Hp~f~~~~  507 (507)
T PLN03224        479 KLITKRDQANRGRLSVGQALSHRFFLPEF  507 (507)
T ss_pred             HHhccCCCCcccCCCHHHHhCCCCcCCCC
Confidence            9999876   6899999999999997653

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-38  Score=307.54  Aligned_cols=245  Identities=24%  Similarity=0.365  Sum_probs=213.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCc---EEEEEEeec--hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~---~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      +...|.++||.|.||.|++|+.+..|+   .||||.++.  ..+.+.+|+.|..|+.++.|     |||++|.++....+
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdH-----PNIIrLEGVVTks~  703 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDH-----PNIIRLEGVVTKSK  703 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCC-----CcEEEEEEEEecCc
Confidence            567889999999999999999887664   799999985  45677889999999999988     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+.||+||| +|+|..||+++. +.|+..++..+++.|+.|++||-+.|+|||||-..||||+                 
T Consensus       704 PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVN-----------------  765 (996)
T KOG0196|consen  704 PVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVN-----------------  765 (996)
T ss_pred             eeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeec-----------------
Confidence            999999999 999999999987 5699999999999999999999999999999999999965                 


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCcc----cccc--CCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN----YIVS--TRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALF  321 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~g--t~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf  321 (432)
                                .+..+|++|||+++.......    +.-|  ...|.|||.+...+++.+|||||+||++||.++ |.-||
T Consensus       766 ----------snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY  835 (996)
T KOG0196|consen  766 ----------SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY  835 (996)
T ss_pred             ----------cceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence                      456677777777776543331    1222  468999999999999999999999999999887 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ...++.+.+..|++...-+|+                                                .+++..|..|+
T Consensus       836 WdmSNQdVIkaIe~gyRLPpP------------------------------------------------mDCP~aL~qLM  867 (996)
T KOG0196|consen  836 WDMSNQDVIKAIEQGYRLPPP------------------------------------------------MDCPAALYQLM  867 (996)
T ss_pred             cccchHHHHHHHHhccCCCCC------------------------------------------------CCCcHHHHHHH
Confidence            999999999998887654331                                                36777899999


Q ss_pred             HHccccCCCCCCCHHHHhc
Q 047395          402 QGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~  420 (432)
                      ..||++|-.+||...||++
T Consensus       868 ldCWqkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  868 LDCWQKDRNRRPKFAQIVS  886 (996)
T ss_pred             HHHHHHHhhcCCCHHHHHH
Confidence            9999999999999999885

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=100.00  E-value=6.9e-38  Score=286.44  Aligned_cols=323  Identities=24%  Similarity=0.371  Sum_probs=218.6

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecC---CCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRE---TGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ..+.+.|.++++||+|.|++||+|.+..   .++.||+|.+.... ....+..|++.|..+..    +.||+.+.+++..
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG----~~ni~~~~~~~rn  106 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGG----SDNIIKLNGCFRN  106 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhcc----chhhhcchhhhcc
Confidence            3456789999999999999999999887   78899999986543 34568899999998865    4899999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec-CCccccCCccccc
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS-PEYLKIPDYKVTA  245 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~-~~~~k~~df~~~~  245 (432)
                      ++.+++||||+ .....+++..     ++..+++.+++.++.||.++|.+|||||||||+|+|++. .+.-.+.||||+-
T Consensus       107 nd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  107 NDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             CCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHH
Confidence            99999999999 7778787754     788999999999999999999999999999999999975 3566788999986


Q ss_pred             CCCCCcccc--c-------------cCCCCCCeEEee-cCCcc--c--ccCCccccccCCCcchhHHHhCCC-CCccchH
Q 047395          246 RSPTDVNYY--K-------------RLPKSSAIKVID-FGSTA--Y--EHQEHNYIVSTRHYRAPEVILGLG-WSYPCDM  304 (432)
Q Consensus       246 ~~~~~~~~~--~-------------~~~~~~~~kl~D-fg~a~--~--~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDi  304 (432)
                      .........  .             .......+.... -|..+  .  .........||++|+|||++...+ .++++||
T Consensus       182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi  261 (418)
T KOG1167|consen  182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI  261 (418)
T ss_pred             HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence            311110000  0             000000000000 00000  0  001112357999999999998764 6889999


Q ss_pred             HHHHHHHHHHHhCCCCCC-CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHh-----hc
Q 047395          305 WSVGCILIELCSGEALFQ-THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV-----LK  378 (432)
Q Consensus       305 wSlGvil~elltg~~pf~-~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  378 (432)
                      ||.|||+..++++..||- ..++.+.+..|..++|...-.-........ .+..+  ..++........+...     .+
T Consensus       262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~-~l~~k--sn~~~~~e~~~~f~s~~~~~~~~  338 (418)
T KOG1167|consen  262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRI-LLWQK--SNIPTIPELRVNFETLHIESIYK  338 (418)
T ss_pred             eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCce-eeecc--ccccccHHHHhchhccChhhccc
Confidence            999999999999999985 455667777777777643321111110000 00000  0011111111111111     00


Q ss_pred             CchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ............+..+..+.||+.+||..||.+|+||+++|+||||..
T Consensus       339 ~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  339 SRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             ccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence            000001112223455568999999999999999999999999999985

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-38  Score=308.02  Aligned_cols=253  Identities=23%  Similarity=0.313  Sum_probs=192.5

Q ss_pred             eEEEeeeecccceE-EEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395           97 YKILRKIGEGTFGQ-VLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus        97 y~i~~~lg~G~~g~-V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      |.-.+.+|.|+.|+ ||+|..  .|+.||||.+-  ....+.+.+|+..|+.-.    .|+|||++++.-.+..+.||+.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll--~e~~~~A~rEi~lL~eSD----~H~NviRyyc~E~d~qF~YIal  582 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLL--EEFFDFAQREIQLLQESD----EHPNVIRYYCSEQDRQFLYIAL  582 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee--CCceehHHHHh--hHhHHHHHHHHHHHHhcc----CCCceEEEEeeccCCceEEEEe
Confidence            34456789999985 799965  48999999763  344556788998887654    4699999999999999999999


Q ss_pred             ccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          176 EMLGPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       176 e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |.|..+|.+++...  ..........+.++.|++.||++||+.+||||||||.||||..+.                   
T Consensus       583 ELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~-------------------  643 (903)
T KOG1027|consen  583 ELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPS-------------------  643 (903)
T ss_pred             hHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccC-------------------
Confidence            99999999999874  111112245678999999999999999999999999999997632                   


Q ss_pred             cccCCCCCCeEEeecCCcccccCCc------cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhC-CCCCCCCCc
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQEH------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG-EALFQTHEN  326 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg-~~pf~~~~~  326 (432)
                         .+....++|+|||+++......      ....||-+|+|||++....-+.++||+||||++|+.++| ..||...-.
T Consensus       644 ---~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~  720 (903)
T KOG1027|consen  644 ---ADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE  720 (903)
T ss_pred             ---CCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH
Confidence               2345678999999887654433      345789999999999998888899999999999999985 999975332


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+  +.|......+                       ..                +     ...+++  ++.|||.+||.
T Consensus       721 R~--~NIl~~~~~L-----------------------~~----------------L-----~~~~d~--eA~dLI~~ml~  752 (903)
T KOG1027|consen  721 RQ--ANILTGNYTL-----------------------VH----------------L-----EPLPDC--EAKDLISRMLN  752 (903)
T ss_pred             hh--hhhhcCccce-----------------------ee----------------e-----ccCchH--HHHHHHHHhcC
Confidence            21  1111110000                       00                0     000011  58899999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 047395          407 YDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ++|..||+|.++|+||+|-..
T Consensus       753 ~dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  753 PDPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             CCcccCCCHHHHhCCCccCCh
Confidence            999999999999999999654

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-37  Score=297.83  Aligned_cols=246  Identities=21%  Similarity=0.301  Sum_probs=204.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCC---cEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETG---ETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~---~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      +...+.++||+|.||.|++|.+...+   ..||||+++...  ...+.|.+|+.++..|.|     +|++++|++.-+ .
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H-----~hliRLyGvVl~-q  183 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQH-----PHLIRLYGVVLD-Q  183 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccC-----cceeEEeeeecc-c
Confidence            45677889999999999999887533   479999997543  256789999999999998     999999999876 6


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ...+|||++ .|+|.+.|++.....|.......++.||+.|+.||..++.|||||-..|+|+.+                
T Consensus       184 p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas----------------  247 (1039)
T KOG0199|consen  184 PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS----------------  247 (1039)
T ss_pred             hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc----------------
Confidence            788999999 999999999855567889999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCccccc------cCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIV------STRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALF  321 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~------gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf  321 (432)
                                 ...|||+|||+.+........++      -...|+|||.+...+++.+||||++||+||||+| |+.||
T Consensus       248 -----------prtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW  316 (1039)
T KOG0199|consen  248 -----------PRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPW  316 (1039)
T ss_pred             -----------cceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCC
Confidence                       45567777777665544433322      2457999999999999999999999999999999 89999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.....++..|...-                                                ....++.++..+.+++
T Consensus       317 ~G~~g~qIL~~iD~~e------------------------------------------------rLpRPk~csedIY~im  348 (1039)
T KOG0199|consen  317 VGCRGIQILKNIDAGE------------------------------------------------RLPRPKYCSEDIYQIM  348 (1039)
T ss_pred             CCCCHHHHHHhccccc------------------------------------------------cCCCCCCChHHHHHHH
Confidence            9999888777664210                                                0122457888899999


Q ss_pred             HHccccCCCCCCCHHHHhcC
Q 047395          402 QGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~h  421 (432)
                      .+||..+|++|||+..|.+.
T Consensus       349 k~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  349 KNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             HHhccCCccccccHHHHHHh
Confidence            99999999999999887543

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-36  Score=278.55  Aligned_cols=206  Identities=25%  Similarity=0.322  Sum_probs=162.7

Q ss_pred             CCCceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEe
Q 047395           82 DGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI  161 (432)
Q Consensus        82 ~~~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~  161 (432)
                      +...++-....+..+.++.+.||+|.||.||+|.++  |+.||||++....+..-.-..|+.....|+|     +||+.+
T Consensus       198 GSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE~SWfrEtEIYqTvmLRH-----ENILgF  270 (513)
T KOG2052|consen  198 GSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDERSWFRETEIYQTVMLRH-----ENILGF  270 (513)
T ss_pred             CCCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccchhhhhhHHHHHHHHHhcc-----chhhhh
Confidence            345566667778889999999999999999999888  8999999997654433333445555566777     999999


Q ss_pred             ecccccC----CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcEeccCCCCcE
Q 047395          162 RNWFDYR----NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL--------RLIHTDLKPENI  228 (432)
Q Consensus       162 ~~~~~~~----~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlkp~NI  228 (432)
                      ++.-..+    .++|||++|. .|||+|||.++   .++.+...+++..++.||++||..        .|.|||||..||
T Consensus       271 IaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNI  347 (513)
T KOG2052|consen  271 IAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNI  347 (513)
T ss_pred             hhccccCCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccE
Confidence            8875543    4799999999 99999999986   499999999999999999999952        599999999999


Q ss_pred             EeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCC----C--Cccc
Q 047395          229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG----W--SYPC  302 (432)
Q Consensus       229 li~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~----~--~~~s  302 (432)
                      ||..+|.+.|+|+||+.+-..+.            ..+|        ...+..+||..|||||++...-    +  -..+
T Consensus       348 LVKkn~~C~IADLGLAv~h~~~t------------~~id--------i~~N~rVGTKRYMAPEvLdetin~~~Fesyk~A  407 (513)
T KOG2052|consen  348 LVKKNGTCCIADLGLAVRHDSDT------------DTID--------IPPNPRVGTKRYMAPEVLDETINMKHFESYKRA  407 (513)
T ss_pred             EEccCCcEEEeeceeeEEecccC------------Cccc--------CCCCCccceeeccChHHhhhhcChhhhhhhhHH
Confidence            99988888888888875433321            1112        2234568999999999996532    1  2458


Q ss_pred             hHHHHHHHHHHHHhC
Q 047395          303 DMWSVGCILIELCSG  317 (432)
Q Consensus       303 DiwSlGvil~elltg  317 (432)
                      ||||||.++||++..
T Consensus       408 DIYafgLVlWEiarR  422 (513)
T KOG2052|consen  408 DIYAFGLVLWEIARR  422 (513)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999999853

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=9e-36  Score=270.99  Aligned_cols=238  Identities=37%  Similarity=0.597  Sum_probs=190.5

Q ss_pred             cceEEEEEEecCCCcEEEEEEeechhhh--hHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-CCCHH
Q 047395          107 TFGQVLDCLDRETGETVAIKVVRSIKKY--REAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLY  183 (432)
Q Consensus       107 ~~g~V~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~  183 (432)
                      +||.||+|.+..+++.+|+|++......  .+.+.+|++.+..++|     ++++++++++......++++|++ +++|.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~-----~~i~~~~~~~~~~~~~~l~~e~~~~~~L~   75 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKH-----PNIVRLYDVFEDEDKLYLVMEYCDGGDLF   75 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCC-----CcHHHHHhheeeCCEEEEEEeCCCCCCHH
Confidence            5899999999988999999998753322  4678889999888866     99999999999889999999999 66999


Q ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCe
Q 047395          184 DFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI  263 (432)
Q Consensus       184 ~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~  263 (432)
                      +++....  .++...+..++.+++.+|.|||+.+|+|+||+|+||+++.                           ++.+
T Consensus        76 ~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~---------------------------~~~~  126 (244)
T smart00220       76 DLLKKRG--RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE---------------------------DGHV  126 (244)
T ss_pred             HHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC---------------------------CCcE
Confidence            9998754  3899999999999999999999999999999999999654                           3566


Q ss_pred             EEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHH-HHHHHHhCCC
Q 047395          264 KVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPI  340 (432)
Q Consensus       264 kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~-~~i~~~~~~~  340 (432)
                      +|+|||.+.....  ......++..|+|||.+.+..++.++||||||+++|+|++|..||......+.. ..+.......
T Consensus       127 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~  206 (244)
T smart00220      127 KLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF  206 (244)
T ss_pred             EEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC
Confidence            7777776655443  234456788999999999888899999999999999999999999763332222 1111110000


Q ss_pred             CHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       341 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      .                                              .....++..+.+++.+||..||++||++.++++
T Consensus       207 ~----------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      207 P----------------------------------------------PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             c----------------------------------------------cccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            0                                              000014556889999999999999999999999


Q ss_pred             CCCC
Q 047395          421 HPFF  424 (432)
Q Consensus       421 hp~f  424 (432)
                      ||||
T Consensus       241 ~~~~  244 (244)
T smart00220      241 HPFF  244 (244)
T ss_pred             CCCC
Confidence            9997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-37  Score=292.43  Aligned_cols=244  Identities=23%  Similarity=0.368  Sum_probs=199.7

Q ss_pred             CceEEEeeeecccceEEEEEEecCC--C--cEEEEEEeec--hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRET--G--ETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~--~--~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      +...+.++||.|.||.||+|.....  |  --||||..+.  .....+.++.|..+++.+.|     |||+++++++.. 
T Consensus       389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdH-----phIikLIGv~~e-  462 (974)
T KOG4257|consen  389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDH-----PHIIKLIGVCVE-  462 (974)
T ss_pred             hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCC-----cchhheeeeeec-
Confidence            3445567899999999999987543  3  3589998875  34557889999999999988     999999999875 


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      ...|||||++ -|.|..||+.+. ..++......++.||+.||.|||+.+.|||||-..||||.+               
T Consensus       463 ~P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS---------------  526 (974)
T KOG4257|consen  463 QPMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS---------------  526 (974)
T ss_pred             cceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC---------------
Confidence            5689999999 999999999876 46999999999999999999999999999999999999654               


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCcccc--cc--CCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI--VS--TRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQ  322 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~--~g--t~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~  322 (432)
                                  ...+||+|||++++......+.  .|  ...|||||.+.-..++.+||||-|||++||++. |..||.
T Consensus       527 ------------p~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfq  594 (974)
T KOG4257|consen  527 ------------PQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQ  594 (974)
T ss_pred             ------------cceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccc
Confidence                        4567788888877765543221  22  457999999999999999999999999999987 999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +..+.+.+..+++.-.                                                .+.++.+++.+..|+.
T Consensus       595 gvkNsDVI~~iEnGeR------------------------------------------------lP~P~nCPp~LYslms  626 (974)
T KOG4257|consen  595 GVKNSDVIGHIENGER------------------------------------------------LPCPPNCPPALYSLMS  626 (974)
T ss_pred             cccccceEEEecCCCC------------------------------------------------CCCCCCCChHHHHHHH
Confidence            8777665544433211                                                1234578888999999


Q ss_pred             HccccCCCCCCCHHHHhc
Q 047395          403 GLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~  420 (432)
                      +||.+||.+||+..|+..
T Consensus       627 kcWayeP~kRPrftei~~  644 (974)
T KOG4257|consen  627 KCWAYEPSKRPRFTEIKA  644 (974)
T ss_pred             HHhccCcccCCcHHHHHH
Confidence            999999999999887653

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-36  Score=283.03  Aligned_cols=197  Identities=27%  Similarity=0.505  Sum_probs=173.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhH---------hHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE---------AAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~---------~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      ..|..++.||+|+||.|++|.++++...|+||.+.+.+...+         ..-.||.||..|+.  +.|+||++++++|
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~--~sH~NIlKlLdfF  638 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNK--HSHENILKLLDFF  638 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhh--cCccchhhhhhee
Confidence            459999999999999999999999999999999976543322         34459999999985  3569999999999


Q ss_pred             ccCCeEEEEEccC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          166 DYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       166 ~~~~~~~lv~e~~--~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                      ++++++||+||.-  |-+|+++|..+.  .++|.+++.|++||+.|+++||++||||||||-+|+.+             
T Consensus       639 Eddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv-------------  703 (772)
T KOG1152|consen  639 EDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV-------------  703 (772)
T ss_pred             ecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCceecccccccEEE-------------
Confidence            9999999999987  679999999876  69999999999999999999999999999999999995             


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhCCCCC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg~~pf  321 (432)
                                    +.++-+||+|||.|..... +-..++||..|.|||++.|.+| +..-|||+||++||.++....||
T Consensus       704 --------------d~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy  769 (772)
T KOG1152|consen  704 --------------DSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY  769 (772)
T ss_pred             --------------ecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence                          4566789999998877544 4466899999999999999887 56789999999999999999998


Q ss_pred             C
Q 047395          322 Q  322 (432)
Q Consensus       322 ~  322 (432)
                      .
T Consensus       770 y  770 (772)
T KOG1152|consen  770 Y  770 (772)
T ss_pred             c
Confidence            5

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=3e-35  Score=244.58  Aligned_cols=211  Identities=23%  Similarity=0.408  Sum_probs=168.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      +...-+..||+|+||.|-+.++..+|...|+|.++..  .+.....++|+.+....    ...|.+|.+++.+-....++
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~----~~CPf~V~FyGa~~regdvw  121 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRT----VDCPFTVHFYGALFREGDVW  121 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccC----CCCCeEEEeehhhhccccEE
Confidence            4455677899999999999999999999999998643  23344555666654433    24599999999988889999


Q ss_pred             EEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          173 IVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +.||.+..||..+.++  .....++|..+-+|+..++.||.|||++ .|||||+||+||||                   
T Consensus       122 IcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI-------------------  182 (282)
T KOG0984|consen  122 ICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI-------------------  182 (282)
T ss_pred             EeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE-------------------
Confidence            9999999999887664  1224699999999999999999999975 89999999999995                   


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCcc--ccccCCCcchhHHHhC----CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHN--YIVSTRHYRAPEVILG----LGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~gt~~y~aPE~~~~----~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                              +..+++|+||||.+........  ...|-..|||||.+..    ..|+-+|||||||++++||.+++.||..
T Consensus       183 --------n~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  183 --------NYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             --------ccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence                    4567788888888876554432  2467788999999853    3689999999999999999999999974


Q ss_pred             -CCcHHHHHHHHHH
Q 047395          324 -HENLEHLAMMERV  336 (432)
Q Consensus       324 -~~~~~~~~~i~~~  336 (432)
                       .+..+++.++.+.
T Consensus       255 w~tpF~qLkqvVee  268 (282)
T KOG0984|consen  255 WGTPFQQLKQVVEE  268 (282)
T ss_pred             cCCHHHHHHHHhcC
Confidence             4556666665443

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=8.8e-35  Score=315.41  Aligned_cols=187  Identities=19%  Similarity=0.287  Sum_probs=154.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      ..|...+.||+|+||.||+|++..++..||||.++....   ....|++++..++|     |||+++++++...+..|+|
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l~H-----pnIv~~~~~~~~~~~~~lv  761 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKLQH-----PNIVKLIGLCRSEKGAYLI  761 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhCCC-----CCcceEEEEEEcCCCCEEE
Confidence            456777899999999999999989999999998864322   22346777777766     9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH---DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |||+ +++|.++++.     +++..+..++.||+.||+|||   +.+|+||||||+||+++.++                
T Consensus       762 ~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~----------------  820 (968)
T PLN00113        762 HEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKD----------------  820 (968)
T ss_pred             EeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCC----------------
Confidence            9999 9999999953     889999999999999999999   67999999999999976543                


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                 ..++. ||.+..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus       821 -----------~~~~~-~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        821 -----------EPHLR-LSLPGLLCT-DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             -----------ceEEE-ecccccccc-CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence                       23332 333322111 1223678999999999998999999999999999999999999953

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-36  Score=286.95  Aligned_cols=258  Identities=26%  Similarity=0.432  Sum_probs=206.1

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ..++|+++..+|+|.||.||+|+++.+++..|+|+++-.. .....++.|+-+++..+|     +||+.+++.+.....+
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h-----~nivay~gsylr~dkl   87 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRH-----PNIVAYFGSYLRRDKL   87 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCC-----cChHHHHhhhhhhcCc
Confidence            3568999999999999999999999999999999998543 233456678877777777     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +++|||| ||+|.+...-.+  ++++.++....+..+.||+|||++|-+|||||-.|||+++.|                
T Consensus        88 wicMEycgggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~g----------------  149 (829)
T KOG0576|consen   88 WICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEG----------------  149 (829)
T ss_pred             EEEEEecCCCcccceeeecc--cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccC----------------
Confidence            9999999 899999887654  899999999999999999999999999999999999966554                


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHh---CCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                 .+|++|||.+.....   ....++||+.|||||+..   ...|...+|||++|++..|+---++|--..
T Consensus       150 -----------DvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl  218 (829)
T KOG0576|consen  150 -----------DVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL  218 (829)
T ss_pred             -----------ceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc
Confidence                       555555555444332   234578999999999874   456899999999999999998777775544


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      -.+..+..+.+....+|.                                            ......+++.+-+|++.+
T Consensus       219 hpmr~l~LmTkS~~qpp~--------------------------------------------lkDk~kws~~fh~fvK~a  254 (829)
T KOG0576|consen  219 HPMRALFLMTKSGFQPPT--------------------------------------------LKDKTKWSEFFHNFVKGA  254 (829)
T ss_pred             chHHHHHHhhccCCCCCc--------------------------------------------ccCCccchHHHHHHHHHH
Confidence            444444443333222221                                            111234566788999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCc
Q 047395          405 LRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      |..||.+|||++.+|.|||..+.-
T Consensus       255 ltknpKkRptaeklL~h~fvs~~l  278 (829)
T KOG0576|consen  255 LTKNPKKRPTAEKLLQHPFVSQTL  278 (829)
T ss_pred             hcCCCccCCChhhheeceeeccch
Confidence            999999999999999999998763

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-34  Score=267.96  Aligned_cols=195  Identities=25%  Similarity=0.324  Sum_probs=151.3

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC----e
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN----H  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~----~  170 (432)
                      ...++.+.||+|.||.||+|...  ++.||||++.....  ..+..|-+|......   .|+||+++++.-+...    .
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~k--qs~~~Ek~Iy~lp~m---~h~nIl~Fi~~ekr~t~~~~e  282 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQEK--QSFQNEKNIYSLPGM---KHENILQFIGAEKRGTADRME  282 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc--CceeEEEecCHHHH--HHHHhHHHHHhccCc---cchhHHHhhchhccCCccccc
Confidence            45778899999999999999654  69999999975433  445566665554321   3499999998876554    8


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CcEeccCCCCcEEeecCCccccCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL---------RLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---------~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      ++||+||. .|+|.++|+.+.   +++....+++..|+.||+|||+-         .|+|||||..||||.+++++.|+|
T Consensus       283 ywLVt~fh~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD  359 (534)
T KOG3653|consen  283 YWLVTEFHPKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD  359 (534)
T ss_pred             eeEEeeeccCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence            99999999 999999999875   99999999999999999999963         699999999999988877766666


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCC-CC-----ccchHHHHHHHHHHH
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WS-----YPCDMWSVGCILIEL  314 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~sDiwSlGvil~el  314 (432)
                      |||+.+...                   |.   .......-+||..|||||++.+.. +.     .+.||||+|.+||||
T Consensus       360 FGLAl~~~p-------------------~~---~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi  417 (534)
T KOG3653|consen  360 FGLALRLEP-------------------GK---PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEI  417 (534)
T ss_pred             cceeEEecC-------------------CC---CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            666543211                   10   111112258999999999998753 22     358999999999999


Q ss_pred             HhCCCCC
Q 047395          315 CSGEALF  321 (432)
Q Consensus       315 ltg~~pf  321 (432)
                      +++..-+
T Consensus       418 ~SRC~~~  424 (534)
T KOG3653|consen  418 ASRCTDA  424 (534)
T ss_pred             Hhhcccc
Confidence            9876544

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3e-33  Score=284.94  Aligned_cols=250  Identities=23%  Similarity=0.376  Sum_probs=196.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecC-------CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEee
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRE-------TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIR  162 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~-------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~  162 (432)
                      ...++.++.+.||+|.||.|++|.-..       ....||||.++..  ....+.+..|++++..+.+    |+|++.++
T Consensus       293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~----H~niv~ll  368 (609)
T KOG0200|consen  293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGK----HPNIVNLL  368 (609)
T ss_pred             echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcC----Ccchhhhe
Confidence            334556777899999999999997431       1457999998743  3456788999999999875    59999999


Q ss_pred             cccccCCeEEEEEccC-CCCHHHHHHhcC------------C--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCc
Q 047395          163 NWFDYRNHICIVFEML-GPSLYDFLRKNN------------Y--RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPEN  227 (432)
Q Consensus       163 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~------------~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  227 (432)
                      +++...+.+++|+||+ .|+|.++++.++            .  ..++..+...++.||+.|++||++.++|||||-..|
T Consensus       369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRN  448 (609)
T KOG0200|consen  369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARN  448 (609)
T ss_pred             eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhh
Confidence            9999999999999999 999999999865            0  138899999999999999999999999999999999


Q ss_pred             EEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccc----ccc--CCCcchhHHHhCCCCCcc
Q 047395          228 ILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY----IVS--TRHYRAPEVILGLGWSYP  301 (432)
Q Consensus       228 Ili~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~g--t~~y~aPE~~~~~~~~~~  301 (432)
                      ||+..                           +..+||+|||+|+........    ..|  ...|||||.+....|+.+
T Consensus       449 VLi~~---------------------------~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~k  501 (609)
T KOG0200|consen  449 VLITK---------------------------NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSK  501 (609)
T ss_pred             EEecC---------------------------CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCccccc
Confidence            99654                           456677777777643332222    122  234999999999999999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCC-cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcC
Q 047395          302 CDMWSVGCILIELCS-GEALFQTHE-NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL  379 (432)
Q Consensus       302 sDiwSlGvil~ellt-g~~pf~~~~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (432)
                      +||||+||+|||++| |..||.+.. ..+.+..+....                                          
T Consensus       502 SDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~------------------------------------------  539 (609)
T KOG0200|consen  502 SDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGN------------------------------------------  539 (609)
T ss_pred             chhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCC------------------------------------------
Confidence            999999999999999 999998744 333322221111                                          


Q ss_pred             chhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       380 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                            ....+..+++++.++++.||+.+|++||+..++.+
T Consensus       540 ------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  540 ------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             ------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence                  11234467788999999999999999999988763

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-34  Score=279.07  Aligned_cols=242  Identities=21%  Similarity=0.262  Sum_probs=193.2

Q ss_pred             eEEEeeeecccceEEEEEEecCCCc----EEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGE----TVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~----~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .+..++||+|+||+||+|.+...|+    +||||++...  .+....++.|+-++..|.|     +|++++++++.... 
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldH-----pnl~RLLgvc~~s~-  771 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDH-----PNLLRLLGVCMLST-  771 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCC-----chHHHHhhhcccch-
Confidence            4556799999999999999876654    7999998643  3446788899999999988     99999999988665 


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +.||++|+ .|+|.++++.++ ..+.....+.|..||++||.|||++++|||||-..||||.+++++             
T Consensus       772 ~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hv-------------  837 (1177)
T KOG1025|consen  772 LQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHV-------------  837 (1177)
T ss_pred             HHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeE-------------
Confidence            88999999 999999999876 579999999999999999999999999999999999997766555             


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCccc---c--ccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY---I--VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQT  323 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~--~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~  323 (432)
                                    ||.|||+++........   .  .-.+.|||-|.+....|+.++|||||||++||++| |..|+.+
T Consensus       838 --------------kitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g  903 (1177)
T KOG1025|consen  838 --------------KITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG  903 (1177)
T ss_pred             --------------EEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC
Confidence                          45555554443322211   1  12557999999999999999999999999999998 9999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      ....++-..++...                                                ....++.++-++.-++.+
T Consensus       904 i~~~eI~dlle~ge------------------------------------------------RLsqPpiCtiDVy~~mvk  935 (1177)
T KOG1025|consen  904 IPAEEIPDLLEKGE------------------------------------------------RLSQPPICTIDVYMVMVK  935 (1177)
T ss_pred             CCHHHhhHHHhccc------------------------------------------------cCCCCCCccHHHHHHHHH
Confidence            77655433222111                                                012345667778899999


Q ss_pred             ccccCCCCCCCHHHHhc
Q 047395          404 LLRYDPSSRLTAHDALK  420 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~  420 (432)
                      ||..|+..||+++++..
T Consensus       936 Cwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  936 CWMIDADSRPTFKELAE  952 (1177)
T ss_pred             HhccCcccCccHHHHHH
Confidence            99999999999988753

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.9e-34  Score=304.87  Aligned_cols=211  Identities=17%  Similarity=0.198  Sum_probs=160.3

Q ss_pred             ceeEeecccc-------cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEE
Q 047395          157 RCVQIRNWFD-------YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL  229 (432)
Q Consensus       157 ~iv~~~~~~~-------~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  229 (432)
                      ||..++++|.       ....++++||+++++|.++|.... ..+++..++.++.||+.||+|||++||+||||||+|||
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiL  112 (793)
T PLN00181         34 YVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFV  112 (793)
T ss_pred             HHHHhhcccCCccccccccchhhhhhccCCccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEE
Confidence            5555566552       224578889999999999997543 46999999999999999999999999999999999999


Q ss_pred             eecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-------------------ccccccCCCcchh
Q 047395          230 FVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-------------------HNYIVSTRHYRAP  290 (432)
Q Consensus       230 i~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------------------~~~~~gt~~y~aP  290 (432)
                      |...|.+|+.|||++.....        +....+|++|||+++.....                   ....+||+.||||
T Consensus       113 l~~~~~~k~~d~~~~~~~~~--------~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP  184 (793)
T PLN00181        113 MSSFNHVSFIESASCSDSGS--------DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP  184 (793)
T ss_pred             EcccCcEEEeeccccCcccc--------cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence            99999999999999764322        24567999999998642210                   0113689999999


Q ss_pred             HHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCH
Q 047395          291 EVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSR  370 (432)
Q Consensus       291 E~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (432)
                      |++.+..++.++|||||||+||||++|.+|+.....  ....+...  ..|...                          
T Consensus       185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~--~~~~~~--------------------------  234 (793)
T PLN00181        185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHR--VLPPQI--------------------------  234 (793)
T ss_pred             hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHh--hcChhh--------------------------
Confidence            999999999999999999999999999888753211  11111100  001000                          


Q ss_pred             HHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                                          ........+++.+||+.||.+|||+.|+|+||||.+
T Consensus       235 --------------------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        235 --------------------LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             --------------------hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence                                001122568899999999999999999999999975

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-34  Score=246.44  Aligned_cols=201  Identities=24%  Similarity=0.368  Sum_probs=170.2

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeec-ccccCCe
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRN-WFDYRNH  170 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~-~~~~~~~  170 (432)
                      .+.+.|.|.+.||+|.||.+.+|+++.++..+++|.+.+......++.+|..---.|.+    |.||+..++ .|+..+.
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~----H~hIi~tY~vaFqt~d~   96 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSP----HQHIIDTYEVAFQTSDA   96 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeecc----chhhhHHHHHHhhcCce
Confidence            35678999999999999999999999999999999998776667788888765444443    578887775 4788889


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +++++||+ -|+|.+-+...+   +.+...+.++.|+++||.|+|++++||||||.+||||...                
T Consensus        97 YvF~qE~aP~gdL~snv~~~G---igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~----------------  157 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEAAG---IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA----------------  157 (378)
T ss_pred             EEEeeccCccchhhhhcCccc---ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC----------------
Confidence            99999999 899998887755   8999999999999999999999999999999999998652                


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC-----CCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-----GWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                               +...+||||||.++..+......--+..|.|||+....     ..++.+|||.||+++|.++||++||+..
T Consensus       158 ---------df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka  228 (378)
T KOG1345|consen  158 ---------DFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA  228 (378)
T ss_pred             ---------CccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh
Confidence                     33479999999988766655555557789999988643     2568899999999999999999999743

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.97  E-value=1.1e-30  Score=231.85  Aligned_cols=208  Identities=38%  Similarity=0.615  Sum_probs=179.1

Q ss_pred             eecccceEEEEEEecCCCcEEEEEEeechhh--hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-C
Q 047395          103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-G  179 (432)
Q Consensus       103 lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~  179 (432)
                      ||+|++|.||++.+..+++.+++|++.....  ....+.+|+..++.+.+     ++++++++++......++++|++ +
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~-----~~i~~~~~~~~~~~~~~~~~e~~~~   75 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH-----PNIVKLYGVFEDENHLYLVMEYCEG   75 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC-----CCeeeEeeeeecCCeEEEEEecCCC
Confidence            6899999999999988899999999976543  24678899999999987     99999999999889999999999 6


Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCC
Q 047395          180 PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK  259 (432)
Q Consensus       180 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  259 (432)
                      ++|.+++.... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++.                          .
T Consensus        76 ~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~--------------------------~  128 (215)
T cd00180          76 GSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS--------------------------D  128 (215)
T ss_pred             CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC--------------------------C
Confidence            99999998752 35899999999999999999999999999999999999653                          1


Q ss_pred             CCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Q 047395          260 SSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER  335 (432)
Q Consensus       260 ~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~  335 (432)
                      ...++|+|||.+......   .....++..|++||.+... .++.++|+|+||+++++|                     
T Consensus       129 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------  187 (215)
T cd00180         129 NGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------  187 (215)
T ss_pred             CCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------
Confidence            456788888877655443   3345678889999999887 788999999999999999                     


Q ss_pred             HhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCH
Q 047395          336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTA  415 (432)
Q Consensus       336 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta  415 (432)
                                                                                 ..+.+++.+||+.||++||++
T Consensus       188 -----------------------------------------------------------~~~~~~l~~~l~~~p~~R~~~  208 (215)
T cd00180         188 -----------------------------------------------------------PELKDLIRKMLQKDPEKRPSA  208 (215)
T ss_pred             -----------------------------------------------------------HHHHHHHHHHhhCCcccCcCH
Confidence                                                                       005689999999999999999


Q ss_pred             HHHhcCC
Q 047395          416 HDALKHP  422 (432)
Q Consensus       416 ~elL~hp  422 (432)
                      .++++|+
T Consensus       209 ~~l~~~~  215 (215)
T cd00180         209 KEILEHL  215 (215)
T ss_pred             HHHhhCC
Confidence            9999885

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.97  E-value=1.9e-31  Score=241.21  Aligned_cols=248  Identities=16%  Similarity=0.192  Sum_probs=190.5

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCC-----cEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETG-----ETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~-----~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      -..|+++...+-+|.||.||.|.+++..     +.|.+|.++...  .....+..|.-.+.     ...|+|+..+.++.
T Consensus       282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly-----~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLY-----GASHPNLLSVLGVS  356 (563)
T ss_pred             hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHh-----cCcCCCccceeEEE
Confidence            3568899999999999999999877543     345566554221  22233334433333     33469999998876


Q ss_pred             cc-CCeEEEEEccC-CCCHHHHHHhcC------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccc
Q 047395          166 DY-RNHICIVFEML-GPSLYDFLRKNN------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLK  237 (432)
Q Consensus       166 ~~-~~~~~lv~e~~-~~~L~~~l~~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  237 (432)
                      .. ....++++.+. -|+|..||...+      .+.++..+...++.|++.|++|||++||||.||-..|++|       
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI-------  429 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI-------  429 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee-------
Confidence            54 45677888888 799999998322      2347778888999999999999999999999999999995       


Q ss_pred             cCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCcccccc-----CCCcchhHHHhCCCCCccchHHHHHHHHH
Q 047395          238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVS-----TRHYRAPEVILGLGWSYPCDMWSVGCILI  312 (432)
Q Consensus       238 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~g-----t~~y~aPE~~~~~~~~~~sDiwSlGvil~  312 (432)
                                          ++..++||+|-.+++..-...-...|     ...||+||.+.+..|+.++|+|||||++|
T Consensus       430 --------------------dd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllW  489 (563)
T KOG1024|consen  430 --------------------DDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLW  489 (563)
T ss_pred             --------------------hhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHH
Confidence                                45567888887777665444333333     45799999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcc
Q 047395          313 ELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD  391 (432)
Q Consensus       313 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (432)
                      ||+| |+.|+...+..++...+.+..                                                ..+++-
T Consensus       490 ELmtlg~~PyaeIDPfEm~~ylkdGy------------------------------------------------RlaQP~  521 (563)
T KOG1024|consen  490 ELMTLGKLPYAEIDPFEMEHYLKDGY------------------------------------------------RLAQPF  521 (563)
T ss_pred             HHHhcCCCCccccCHHHHHHHHhccc------------------------------------------------eecCCC
Confidence            9998 999999888888766654432                                                123345


Q ss_pred             cchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      ++++++..++.-||+.+|++||+.+|+..
T Consensus       522 NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  522 NCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             CCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            78999999999999999999999999874

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.97  E-value=8.3e-30  Score=229.23  Aligned_cols=198  Identities=37%  Similarity=0.615  Sum_probs=167.4

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh--hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      |.+.+.||.|++|.||++....+++.+|+|.+.....  ....+.+|++.+..+.+     ++++++++++......+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~-----~~i~~~~~~~~~~~~~~~v   75 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKH-----PNIVKLYGVFEDPEPLYLV   75 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCC-----CChhhheeeeecCCceEEE
Confidence            5678999999999999999998899999999875432  45678889888888865     9999999999888999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      +|++ +++|.+++..... .+++..+..++.+++.+|.+||+++++|+||+|.||+++.                     
T Consensus        76 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~---------------------  133 (225)
T smart00221       76 MEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGM---------------------  133 (225)
T ss_pred             EeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---------------------
Confidence            9999 7799999987641 2899999999999999999999999999999999999653                     


Q ss_pred             cccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHH-hCCCCCccchHHHHHHHHHHHHhCCCCCCC-CCcH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVI-LGLGWSYPCDMWSVGCILIELCSGEALFQT-HENL  327 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~-~~~~~~~~sDiwSlGvil~elltg~~pf~~-~~~~  327 (432)
                            ...++|+|||.+.......    ....++..|++||.+ ....++.++||||||+++++|++|+.||.. .+..
T Consensus       134 ------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~  207 (225)
T smart00221      134 ------DGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFT  207 (225)
T ss_pred             ------CCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhH
Confidence                  4567888888766554432    445678889999999 666778899999999999999999999976 3443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.96  E-value=2e-29  Score=218.45  Aligned_cols=166  Identities=23%  Similarity=0.294  Sum_probs=121.9

Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCC
Q 047395          180 PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK  259 (432)
Q Consensus       180 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~  259 (432)
                      |+|.+++...+ ..+++..++.++.||+.||.|||+++      ||+|||++.++                         
T Consensus         1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~-------------------------   48 (176)
T smart00750        1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDG-------------------------   48 (176)
T ss_pred             CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCcc-------------------------
Confidence            68999998654 46999999999999999999999998      99999966544                         


Q ss_pred             CCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhC
Q 047395          260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL-EHLAMMERVLG  338 (432)
Q Consensus       260 ~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~-~~~~~i~~~~~  338 (432)
                        .+++  ||.+.......  ..||+.|+|||++.+..++.++|||||||++|||++|..||...... ..+..+.....
T Consensus        49 --~~~~--fG~~~~~~~~~--~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~  122 (176)
T smart00750       49 --LLKL--DGSVAFKTPEQ--SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP  122 (176)
T ss_pred             --ceee--ccceEeecccc--CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc
Confidence              4454  66554433222  26899999999999999999999999999999999999999754432 12222211111


Q ss_pred             CCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch--HHHHHHHHHccccCCCCCCCHH
Q 047395          339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA--GYLIDLLQGLLRYDPSSRLTAH  416 (432)
Q Consensus       339 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~li~~~L~~dP~~R~ta~  416 (432)
                      ...                      +.....                    ...++  ..+.++|.+||..||.+|||+.
T Consensus       123 ~~~----------------------~~~~~~--------------------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~  160 (176)
T smart00750      123 ADD----------------------PRDRSN--------------------LESVSAARSFADFMRVCASRLPQRREAAN  160 (176)
T ss_pred             cCC----------------------cccccc--------------------HHHHHhhhhHHHHHHHHHhcccccccCHH
Confidence            000                      000000                    00112  2488999999999999999999


Q ss_pred             HHhcCCCCC
Q 047395          417 DALKHPFFT  425 (432)
Q Consensus       417 elL~hp~f~  425 (432)
                      |+++|+|+.
T Consensus       161 ~ll~~~~~~  169 (176)
T smart00750      161 HYLAHCRAL  169 (176)
T ss_pred             HHHHHHHHH
Confidence            999999875

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.96  E-value=5.2e-27  Score=222.61  Aligned_cols=209  Identities=27%  Similarity=0.348  Sum_probs=171.4

Q ss_pred             ceEEEeeeecccceEEEEEEecCCC-cEEEEEEeechhhh-hHhHHHHHHHHHHHHhcCCCCCceeEeeccc-ccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETG-ETVAIKVVRSIKKY-REAAMTEIDVLELLKRYDRSGSRCVQIRNWF-DYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~-~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~-~~~~~~~  172 (432)
                      +|++.++||+|+||.||+|.+..++ ..+|+|+....... ...+..|..++..+.. .....++..+++.. .....-|
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~-~~~~~~~~~~~~~G~~~~~~~~   97 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK-KNGPSHFPKLLDHGRSTEDFNF   97 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh-hcCCCCCCEEEEeccCCCceeE
Confidence            8999999999999999999988774 67999987654222 2268889999999885 22235788888888 5778899


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +||+.+|.+|.++......+.++..++..++.|++.+|++||+.|++||||||+|+++...+                  
T Consensus        98 iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~------------------  159 (322)
T KOG1164|consen   98 IVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSS------------------  159 (322)
T ss_pred             EEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCC------------------
Confidence            99999999999998776656899999999999999999999999999999999999975421                  


Q ss_pred             ccccCCCCCCeEEeecCCcc--cc----c-----C-C-ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          253 YYKRLPKSSAIKVIDFGSTA--YE----H-----Q-E-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~--~~----~-----~-~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                          ......+.|.|||+++  ..    .     . . .....||..|+++.+..+...+.+.|+||++.++.+++.|..
T Consensus       160 ----~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~L  235 (322)
T KOG1164|consen  160 ----RSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSL  235 (322)
T ss_pred             ----CcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCC
Confidence                0122568889999887  21    0     1 1 123569999999999999999999999999999999999999


Q ss_pred             CCCCCCcH
Q 047395          320 LFQTHENL  327 (432)
Q Consensus       320 pf~~~~~~  327 (432)
                      ||......
T Consensus       236 PW~~~~~~  243 (322)
T KOG1164|consen  236 PWEALEMT  243 (322)
T ss_pred             CCcccccc
Confidence            99776543

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=4e-28  Score=206.74  Aligned_cols=210  Identities=29%  Similarity=0.434  Sum_probs=175.5

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ..++|+++++||+|+||.+|+|....+|..||||+-++. .....+..|.++...|++    ...|..+..+..+..+-.
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-a~hpqL~yEskvY~iL~~----g~GiP~i~~y~~e~~ynv   87 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK-AKHPQLLYESKVYRILQG----GVGIPHIRHYGTEKDYNV   87 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc-CCCcchhHHHHHHHHhcc----CCCCchhhhhccccccce
Confidence            457899999999999999999999999999999985443 334567789999998886    367888888888889999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +||+++|.+|.+++.-.. +.++..+++-++-|++.-++|+|.+++|||||||+|+|..-                    
T Consensus        88 lVMdLLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGl--------------------  146 (341)
T KOG1163|consen   88 LVMDLLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGL--------------------  146 (341)
T ss_pred             eeeeccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeecc--------------------
Confidence            999999999999987654 46999999999999999999999999999999999999642                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccC----------CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQ----------EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                          -.....+.|+|||+|+..-.          +.....||..|.+--...+..-+..-|+=|+|.+|..+.-|..||+
T Consensus       147 ----grh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQ  222 (341)
T KOG1163|consen  147 ----GRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQ  222 (341)
T ss_pred             ----ccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccc
Confidence                12345789999999875322          2234679999999888887777889999999999999999999999


Q ss_pred             CCCcHHHHHH
Q 047395          323 THENLEHLAM  332 (432)
Q Consensus       323 ~~~~~~~~~~  332 (432)
                      +.......+.
T Consensus       223 glka~tk~QK  232 (341)
T KOG1163|consen  223 GLKAATKKQK  232 (341)
T ss_pred             ccchhhHHHH
Confidence            8765444333

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=1.8e-27  Score=211.59  Aligned_cols=204  Identities=27%  Similarity=0.385  Sum_probs=176.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .-.|+++++||+|+||.++.|.+..++++||||.-. .+....++..|.+..+.|...    +.|..++-+-..+.+-.|
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEP-rkS~APQLrdEYr~YKlL~g~----~GIP~vYYFGqeG~~NiL  101 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEP-RKSEAPQLRDEYRTYKLLGGT----EGIPQVYYFGQEGKYNIL  101 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEecc-ccCCcchHHHHHHHHHHHcCC----CCCCceeeeccccchhhh
Confidence            346999999999999999999999999999999643 333445677888888888753    788888888888888999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          174 VFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       174 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |+|++|.||.|+..-.+ +.|+..++..++.|++.-++|+|++.+|.|||||+|+||..++                   
T Consensus       102 VidLLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~-------------------  161 (449)
T KOG1165|consen  102 VIDLLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPG-------------------  161 (449)
T ss_pred             hhhhhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCC-------------------
Confidence            99999999999998776 6799999999999999999999999999999999999998765                   


Q ss_pred             cccCCCCCCeEEeecCCcccccCC----------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQE----------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                         ......+.|+|||+|+.....          .....||..||+=-...|..-+..-|+=|||-++++.|-|..||++
T Consensus       162 ---~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG  238 (449)
T KOG1165|consen  162 ---TKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG  238 (449)
T ss_pred             ---CCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence               445677999999999864322          2346799999999988998889999999999999999999999987


Q ss_pred             CC
Q 047395          324 HE  325 (432)
Q Consensus       324 ~~  325 (432)
                      ..
T Consensus       239 LK  240 (449)
T KOG1165|consen  239 LK  240 (449)
T ss_pred             cc
Confidence            54

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=4.8e-28  Score=243.80  Aligned_cols=260  Identities=22%  Similarity=0.284  Sum_probs=182.9

Q ss_pred             Cce-EEEeeeecccceEEEEEEecCCCcEEEEEEee----chhh---hhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           95 SRY-KILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKK---YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        95 ~~y-~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~----~~~~---~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ..| .....+|.|++|.|+.+........++.|.++    ....   ....+..|..+-..+.|     +|++..+..+.
T Consensus       317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h-----~~~~e~l~~~~  391 (601)
T KOG0590|consen  317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSH-----PNIIETLDIVQ  391 (601)
T ss_pred             cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccC-----CchhhhHHHHh
Confidence            445 45678999999988888887777767776553    1111   11113334444444444     89888777766


Q ss_pred             cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          167 YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       167 ~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      +.....-+||||.++|+.++....  .++..++..+++|++.||+|||+.||.||||||+|+++..+|            
T Consensus       392 ~~~~~~~~mE~~~~Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g------------  457 (601)
T KOG0590|consen  392 EIDGILQSMEYCPYDLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENG------------  457 (601)
T ss_pred             hcccchhhhhcccHHHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCC------------
Confidence            655555559999449999998863  589999999999999999999999999999999999976654            


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccC-------CccccccCCCcchhHHHhCCCCCc-cchHHHHHHHHHHHHhCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-------EHNYIVSTRHYRAPEVILGLGWSY-PCDMWSVGCILIELCSGE  318 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~-~sDiwSlGvil~elltg~  318 (432)
                                     .+||+|||.+.....       .....+|+..|+|||++.+..|++ ..||||.|++++.|.+|+
T Consensus       458 ---------------~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~  522 (601)
T KOG0590|consen  458 ---------------ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGR  522 (601)
T ss_pred             ---------------ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCC
Confidence                           556666665543221       223468999999999999999875 579999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||......+....  ..                     . ...+-..                ..........++...+
T Consensus       523 ~~Wk~a~~~~~~~~--~~---------------------~-~~~~~~~----------------~~~~~~~~~~lp~~~~  562 (601)
T KOG0590|consen  523 FPWKVAKKSDNSFK--TN---------------------N-YSDQRNI----------------FEGPNRLLSLLPRETR  562 (601)
T ss_pred             Cccccccccccchh--hh---------------------c-ccccccc----------------ccChHHHHHhchhhHH
Confidence            99975433221100  00                     0 0000000                0000111223455678


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .+|.+||++||.+|.|+++|++.+||+...
T Consensus       563 ~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  563 IIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             HHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            999999999999999999999999998754

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.94  E-value=1.2e-24  Score=206.80  Aligned_cols=256  Identities=33%  Similarity=0.511  Sum_probs=194.3

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCC-ceeEeecccccCCeE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHI  171 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~-~iv~~~~~~~~~~~~  171 (432)
                      |.+.+.||.|+||.||++.+.   ..+++|.+.....    ....+.+|+.++..+.+     + +++.+.+.+......
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~-----~~~i~~~~~~~~~~~~~   73 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNH-----PPNIVKLYDFFQDEGSL   73 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccC-----CcceeeEEEEEecCCEE
Confidence            788999999999999999987   7899999864332    35678888988888877     5 799999999877788


Q ss_pred             EEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNY-RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +++++++ +++|.+++..... ..++......++.|++.++.|+|+.+++|||+||+||+++..+               
T Consensus        74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~---------------  138 (384)
T COG0515          74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDG---------------  138 (384)
T ss_pred             EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCC---------------
Confidence            9999999 8999977776431 1589999999999999999999999999999999999975433               


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC---------CccccccCCCcchhHHHhC---CCCCccchHHHHHHHHHHHHhC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ---------EHNYIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---------~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvil~elltg  317 (432)
                                 ..++++|||.+.....         ......||..|+|||.+.+   ..+....|+||+|++++++++|
T Consensus       139 -----------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~  207 (384)
T COG0515         139 -----------RVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTG  207 (384)
T ss_pred             -----------CeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhC
Confidence                       1567777776653322         2345689999999999988   5788999999999999999999


Q ss_pred             CCCCCCCCc----HHHHHHHHHHhCC-CCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhccc
Q 047395          318 EALFQTHEN----LEHLAMMERVLGP-IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH  392 (432)
Q Consensus       318 ~~pf~~~~~----~~~~~~i~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (432)
                      ..||.....    ......+.....+ .....                   .  ....                    ..
T Consensus       208 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~--~~~~--------------------~~  246 (384)
T COG0515         208 LPPFEGEKNSSATSQTLKIILELPTPSLASPL-------------------S--PSNP--------------------EL  246 (384)
T ss_pred             CCCCCCCCccccHHHHHHHHHhcCCccccccc-------------------C--cccc--------------------ch
Confidence            999877654    2222222221111 00000                   0  0000                    11


Q ss_pred             chHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       393 ~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ....+.+++.+|+..+|..|.+..+...++|....
T Consensus       247 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  281 (384)
T COG0515         247 ISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL  281 (384)
T ss_pred             hhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence            22347799999999999999999998888666543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=6.5e-26  Score=214.63  Aligned_cols=159  Identities=21%  Similarity=0.186  Sum_probs=120.2

Q ss_pred             eecCceEEEeeeecccceEEEEEEecC-CCcEEEEEEeech------hhhhHhHHHHHHHHHHHHhcCCCCCcee-Eeec
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRE-TGETVAIKVVRSI------KKYREAAMTEIDVLELLKRYDRSGSRCV-QIRN  163 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~-~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~iv-~~~~  163 (432)
                      .+.++|++.+.||+|+||+||+|++.. +++.||||++...      ......+.+|+++++.+.|     +|++ .+++
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h-----~~iv~~l~~   89 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRG-----IGVVPQLLA   89 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccC-----CCCCcEEEE
Confidence            456789999999999999999998876 6788899986422      2235568899999999987     7777 4544


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccC-CCCcEEeecCCccccCCc
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDL-KPENILFVSPEYLKIPDY  241 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl-kp~NIli~~~~~~k~~df  241 (432)
                      +    +..|+||||+ |++|.. +..     ..   ...++.|+++||.|||++||+|||| ||+|||++.+        
T Consensus        90 ~----~~~~LVmE~~~G~~L~~-~~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~--------  148 (365)
T PRK09188         90 T----GKDGLVRGWTEGVPLHL-ARP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPD--------  148 (365)
T ss_pred             c----CCcEEEEEccCCCCHHH-hCc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCC--------
Confidence            2    4579999999 888863 211     11   1467899999999999999999999 9999997543        


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----------ccccccCCCcchhHHHhC
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----------HNYIVSTRHYRAPEVILG  295 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~gt~~y~aPE~~~~  295 (432)
                                         +.++|+|||+|+.....           .....+++.|+|||.+.-
T Consensus       149 -------------------~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        149 -------------------GEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             -------------------CCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence                               45666777766533221           134567888999998853

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.93  E-value=3.3e-27  Score=227.14  Aligned_cols=240  Identities=24%  Similarity=0.387  Sum_probs=185.9

Q ss_pred             eeecccceEEEEEEe---cCCCcEEEEEEeechhh---hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395          102 KIGEGTFGQVLDCLD---RETGETVAIKVVRSIKK---YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus       102 ~lg~G~~g~V~~a~~---~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      .+|.|.||.|++++.   ...+..+|+|++++...   .......|..++..+.    .++.+++++-.++.+...++++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~----~~~f~v~lhyafqt~~kl~l~l   76 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVH----NTPFLVKLHYAFQTDGKLYLIL   76 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhcc----CCCceeeeeeeeccccchhHhh
Confidence            379999999997753   34567899998864221   1123344555565554    2499999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          176 EML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ++. |+.|...+....  .+.+.....+...++.|++++|+.+|+|||+|++||+++.+|++++.|              
T Consensus        77 d~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~td--------------  140 (612)
T KOG0603|consen   77 DFLRGGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTD--------------  140 (612)
T ss_pred             hhcccchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCC--------------
Confidence            999 889988887654  688899999999999999999999999999999999976665555544              


Q ss_pred             ccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME  334 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~  334 (432)
                                   ||.++..-..... |||..|||||++.  ....++|.||||+++|||+||..||.+    +....|.
T Consensus       141 -------------fglske~v~~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il  200 (612)
T KOG0603|consen  141 -------------FGLSKEAVKEKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL  200 (612)
T ss_pred             -------------chhhhHhHhhhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh
Confidence                         5544433222222 8999999999998  567899999999999999999999987    4445554


Q ss_pred             HHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCC
Q 047395          335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLT  414 (432)
Q Consensus       335 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~t  414 (432)
                      +..-..|.                                                 ..+..+++++..++..+|.+|..
T Consensus       201 ~~~~~~p~-------------------------------------------------~l~~~a~~~~~~l~~r~p~nrLg  231 (612)
T KOG0603|consen  201 KAELEMPR-------------------------------------------------ELSAEARSLFRQLFKRNPENRLG  231 (612)
T ss_pred             hhccCCch-------------------------------------------------hhhHHHHHHHHHHHhhCHHHHhc
Confidence            43333333                                                 34555789999999999999995


Q ss_pred             -----HHHHhcCCCCCCCccC
Q 047395          415 -----AHDALKHPFFTRDYYR  430 (432)
Q Consensus       415 -----a~elL~hp~f~~~~~~  430 (432)
                           +.|+++|+||+...+.
T Consensus       232 ~~~~~~~eik~h~f~~~i~~~  252 (612)
T KOG0603|consen  232 AGPDGVDEIKQHEFFQSIDWN  252 (612)
T ss_pred             cCcchhHHHhccchheeeeHh
Confidence                 5899999999886653

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.93  E-value=3.3e-26  Score=230.84  Aligned_cols=251  Identities=25%  Similarity=0.368  Sum_probs=177.8

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhH---HHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAA---MTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~---~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .|...+.||++.|=+|.+|++.+ |. |+||++-+..  .....+   ..|++ ....+     +||++.+..+......
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~-----~pn~lPfqk~~~t~kA   95 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMK-----APNCLPFQKVLVTDKA   95 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhc-----CCcccchHHHHHhhHH
Confidence            68888999999999999998765 44 9999985422  111222   23333 23333     3999999998888888


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          171 ICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       171 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      .|||=+|.-.+|+|.|..+.  -+...+.+.|+.||+.||.-+|..||+|||||.+||||++-+.+.++||.--+...-.
T Consensus        96 AylvRqyvkhnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP  173 (1431)
T KOG1240|consen   96 AYLVRQYVKHNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP  173 (1431)
T ss_pred             HHHHHHHHhhhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCC
Confidence            99999999999999998765  3678889999999999999999999999999999999999999999998654332222


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC----------C-CCccchHHHHHHHHHHHHh-CC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL----------G-WSYPCDMWSVGCILIELCS-GE  318 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDiwSlGvil~ellt-g~  318 (432)
                      .+.           =+||++-.....      .-..|.|||.+...          . .+++.||||+||+++||++ |.
T Consensus       174 eDN-----------Padf~fFFDTSr------RRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~  236 (1431)
T KOG1240|consen  174 EDN-----------PADFTFFFDTSR------RRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGR  236 (1431)
T ss_pred             CCC-----------cccceEEEecCC------ceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCC
Confidence            110           134543221111      11249999998542          1 5678999999999999998 89


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      +||.-    .++-...+.....++..+..+.                                            +..++
T Consensus       237 PlF~L----SQL~aYr~~~~~~~e~~Le~Ie--------------------------------------------d~~~R  268 (1431)
T KOG1240|consen  237 PLFTL----SQLLAYRSGNADDPEQLLEKIE--------------------------------------------DVSLR  268 (1431)
T ss_pred             CcccH----HHHHhHhccCccCHHHHHHhCc--------------------------------------------CccHH
Confidence            99952    1111111111111111111110                                            11378


Q ss_pred             HHHHHccccCCCCCCCHHHHhcC
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      +||..|++.||++|.+|++.|+-
T Consensus       269 nlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  269 NLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHHHHHccCchhccCHHHHHHh
Confidence            99999999999999999999974

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.92  E-value=1.5e-25  Score=225.86  Aligned_cols=240  Identities=26%  Similarity=0.417  Sum_probs=170.5

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ..++|..++.|..|+||.||+++++.+.+.+|+|+-+....           +          .||..+.      +..+
T Consensus        81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~li-----------l----------Rnilt~a------~npf  133 (1205)
T KOG0606|consen   81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNLI-----------L----------RNILTFA------GNPF  133 (1205)
T ss_pred             CccccceeEeeccCCCCceeeeeccccccchhhcccccchh-----------h----------hcccccc------CCcc
Confidence            35689999999999999999999999999999965322111           1          1111111      1112


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      .|     |+=...++.-+  +++...        +.+++|||+.||+|||+||+|.+|+.-|++|++|||+.........
T Consensus       134 vv-----gDc~tllk~~g--~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a  198 (1205)
T KOG0606|consen  134 VV-----GDCATLLKNIG--PLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA  198 (1205)
T ss_pred             ee-----chhhhhcccCC--CCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence            22     33344444333  344322        7899999999999999999999999999999999988754322210


Q ss_pred             ccccCCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA  331 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~  331 (432)
                      .        ..|=.  ++.+...+ .....+||+.|+|||++....|+..+|+|++|+|+||.+.|..||.+....+.+.
T Consensus       199 t--------nl~eg--~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg  268 (1205)
T KOG0606|consen  199 T--------NLKEG--HIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG  268 (1205)
T ss_pred             c--------hhhhc--chHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHh
Confidence            0        00000  00011111 1234689999999999999999999999999999999999999999998888777


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                      .+.......|                       +.                       .....++++++|.++|+.+|..
T Consensus       269 ~visd~i~wp-----------------------E~-----------------------dea~p~Ea~dli~~LL~qnp~~  302 (1205)
T KOG0606|consen  269 QVISDDIEWP-----------------------EE-----------------------DEALPPEAQDLIEQLLRQNPLC  302 (1205)
T ss_pred             hhhhhhcccc-----------------------cc-----------------------CcCCCHHHHHHHHHHHHhChHh
Confidence            6655443332                       21                       1245667899999999999999


Q ss_pred             CC---CHHHHhcCCCCCCCccC
Q 047395          412 RL---TAHDALKHPFFTRDYYR  430 (432)
Q Consensus       412 R~---ta~elL~hp~f~~~~~~  430 (432)
                      |.   .+-++.+|+||+.-.|.
T Consensus       303 Rlgt~ga~evk~h~ff~~LDw~  324 (1205)
T KOG0606|consen  303 RLGTGGALEVKQHGFFQLLDWK  324 (1205)
T ss_pred             hcccchhhhhhhccceeecccc
Confidence            98   57889999999986654

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=3.4e-24  Score=195.07  Aligned_cols=189  Identities=21%  Similarity=0.280  Sum_probs=143.0

Q ss_pred             CCCCceeEeeccccc---------------------------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHH
Q 047395          153 RSGSRCVQIRNWFDY---------------------------RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ  205 (432)
Q Consensus       153 ~~~~~iv~~~~~~~~---------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~q  205 (432)
                      ..|||||++..+|.+                           +..+|+||.-...+|.+++..+.   .+....+-++.|
T Consensus       273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~laQ  349 (598)
T KOG4158|consen  273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILAQ  349 (598)
T ss_pred             CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHHH
Confidence            357999999888753                           24689999999999999998865   788888899999


Q ss_pred             HHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC---------
Q 047395          206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ---------  276 (432)
Q Consensus       206 i~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---------  276 (432)
                      +++|+.|||++||.|||+|.+|||+.-+                       -|.-..+.|+|||.+-....         
T Consensus       350 lLEav~hL~~hgvAhRDlKSDNiL~Eld-----------------------dD~~P~LVvaDFGCcLAd~~hGlqlpy~S  406 (598)
T KOG4158|consen  350 LLEAVTHLHKHGVAHRDLKSDNILLELD-----------------------DDEIPQLVVADFGCCLADDNHGLQLPYES  406 (598)
T ss_pred             HHHHHHHHHHccchhhcccccceEEEec-----------------------CCCCcEEEEcccceeeecccccccccccc
Confidence            9999999999999999999999998643                       23345678899997543221         


Q ss_pred             CccccccCCCcchhHHHhCCC------CCccchHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCCCHHHHHhc
Q 047395          277 EHNYIVSTRHYRAPEVILGLG------WSYPCDMWSVGCILIELCSGEALFQTHENLEH--LAMMERVLGPIPQHMLKRV  348 (432)
Q Consensus       277 ~~~~~~gt~~y~aPE~~~~~~------~~~~sDiwSlGvil~elltg~~pf~~~~~~~~--~~~i~~~~~~~p~~~~~~~  348 (432)
                      ......|...-||||+....+      --.++|.|+.|.+.||+++...||.+......  ...-               
T Consensus       407 ~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq---------------  471 (598)
T KOG4158|consen  407 DEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ---------------  471 (598)
T ss_pred             ccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh---------------
Confidence            112235777899999997543      13589999999999999999999986332110  0000               


Q ss_pred             CCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHH
Q 047395          349 DKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAH  416 (432)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~  416 (432)
                                                        +...+..++.+++.+++|+..+|+.||++|+++.
T Consensus       472 ----------------------------------e~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  472 ----------------------------------ESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             ----------------------------------hhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence                                              1112233456777899999999999999999843

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.91  E-value=1.6e-23  Score=190.18  Aligned_cols=202  Identities=23%  Similarity=0.310  Sum_probs=124.7

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHH----------hcCCCCC-ceeE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLK----------RYDRSGS-RCVQ  160 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~----------~~~~~~~-~iv~  160 (432)
                      .+...+.||.|+++.||.+.+..|++.+|+|++....    ...+.+.+|.-....+.          +...--| -+++
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            4677889999999999999999999999999985321    12233333332221110          1000000 1222


Q ss_pred             eec---ccccC---C-----eEEEEEccCCCCHHHHHHh---cCCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeccCC
Q 047395          161 IRN---WFDYR---N-----HICIVFEMLGPSLYDFLRK---NNYR--PFPVDLVREIGRQLLECVAFMHDLRLIHTDLK  224 (432)
Q Consensus       161 ~~~---~~~~~---~-----~~~lv~e~~~~~L~~~l~~---~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  224 (432)
                      +.+   ++...   .     ..+++|+-+.++|.+++..   ....  .+.......+..|++..+++||+.||+|+|||
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~  172 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK  172 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence            211   11111   1     2478888888899888653   2211  12233345567999999999999999999999


Q ss_pred             CCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC--------
Q 047395          225 PENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL--------  296 (432)
Q Consensus       225 p~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--------  296 (432)
                      |+|++++.                           ++.+.|+||+.....+........+..|.+||.....        
T Consensus       173 ~~nfll~~---------------------------~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~  225 (288)
T PF14531_consen  173 PENFLLDQ---------------------------DGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNA  225 (288)
T ss_dssp             GGGEEE-T---------------------------TS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEE
T ss_pred             eeeEEEcC---------------------------CCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccc
Confidence            99999654                           5566777776554444333323345779999987542        


Q ss_pred             CCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          297 GWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       297 ~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                      .++.+.|.|+||+++|.|++|..||...
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~  253 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGLS  253 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence            4788999999999999999999999754

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.90  E-value=6.3e-24  Score=187.20  Aligned_cols=171  Identities=12%  Similarity=0.160  Sum_probs=127.4

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhh----------HhHHHHHHHHHHHHhcCCCCCceeE
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----------EAAMTEIDVLELLKRYDRSGSRCVQ  160 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~----------~~~~~E~~~l~~l~~~~~~~~~iv~  160 (432)
                      +.+.++|++++.||.|+||.||++.+  ++..+|||+++......          +.+.+|+..+..+.|     ++|..
T Consensus        27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~-----~GI~~   99 (232)
T PRK10359         27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRS-----EGLAS   99 (232)
T ss_pred             HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHH-----CCCCc
Confidence            34678999999999999999999755  46789999996432211          125789999999988     77776


Q ss_pred             eeccccc--------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEee
Q 047395          161 IRNWFDY--------RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFV  231 (432)
Q Consensus       161 ~~~~~~~--------~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  231 (432)
                      +.+++..        .+..+|||||+ |.+|.++.      .+++.    ...+++.+|..||+.|++|||+||+||+++
T Consensus       100 ~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~  169 (232)
T PRK10359        100 LNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP------EISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVS  169 (232)
T ss_pred             ceEeeeecccccccccCCeEEEEEEECCccHHHhh------hccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEe
Confidence            6666442        34689999999 78998873      23332    456999999999999999999999999964


Q ss_pred             cCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHH
Q 047395          232 SPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL  311 (432)
Q Consensus       232 ~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil  311 (432)
                      .                           ++ ++|+|||.........         ....++....|+.++||||||+++
T Consensus       170 ~---------------------------~g-i~liDfg~~~~~~e~~---------a~d~~vler~y~~~~di~~lg~~~  212 (232)
T PRK10359        170 K---------------------------NG-LRIIDLSGKRCTAQRK---------AKDRIDLERHYGIKNEIKDLGYYL  212 (232)
T ss_pred             C---------------------------CC-EEEEECCCcccccchh---------hHHHHHHHhHhcccccccceeEee
Confidence            3                           34 8899998765432211         111244555677899999999998


Q ss_pred             HHHH
Q 047395          312 IELC  315 (432)
Q Consensus       312 ~ell  315 (432)
                      ..+.
T Consensus       213 ~~~~  216 (232)
T PRK10359        213 LIYK  216 (232)
T ss_pred             hHHH
Confidence            7654

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.89  E-value=3.8e-23  Score=180.25  Aligned_cols=137  Identities=22%  Similarity=0.275  Sum_probs=102.4

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeechhh---h------------------------hHhHHHHHHHHHHHHhcC
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---Y------------------------REAAMTEIDVLELLKRYD  152 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~------------------------~~~~~~E~~~l~~l~~~~  152 (432)
                      .+.||+|+||.||+|.+. +|+.||||+++....   .                        ......|++++..+.+..
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            468999999999999986 899999999975321   0                        112345899999998732


Q ss_pred             CCCCceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HhCCcEeccCCCCcEEe
Q 047395          153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM-HDLRLIHTDLKPENILF  230 (432)
Q Consensus       153 ~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~ivHrDlkp~NIli  230 (432)
                      ...|+++.      ... .+|||||+ |++|...+...  ..++...+..++.|++.+|.+| |+.||+||||||+|||+
T Consensus        81 v~~p~~~~------~~~-~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli  151 (190)
T cd05147          81 IPCPEPIL------LKS-HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY  151 (190)
T ss_pred             CCCCcEEE------ecC-CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence            22233321      112 37999999 55665443332  3689999999999999999999 79999999999999996


Q ss_pred             ecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccc
Q 047395          231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE  274 (432)
Q Consensus       231 ~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  274 (432)
                      +                            ++.++|+|||+|...
T Consensus       152 ~----------------------------~~~v~LiDFG~a~~~  167 (190)
T cd05147         152 H----------------------------DGKLYIIDVSQSVEH  167 (190)
T ss_pred             E----------------------------CCcEEEEEccccccC
Confidence            4                            246899999988654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.88  E-value=5e-22  Score=173.89  Aligned_cols=137  Identities=20%  Similarity=0.182  Sum_probs=101.3

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeechhhh---------------------------hHhHHHHHHHHHHHHhcC
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY---------------------------REAAMTEIDVLELLKRYD  152 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~E~~~l~~l~~~~  152 (432)
                      .+.||+|++|.||+|.+. +|+.||||+++.....                           ......|...+..+.+  
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~--   78 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYE--   78 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHh--
Confidence            568999999999999987 8999999998743110                           1223578888888887  


Q ss_pred             CCCCceeEeecccccCCeEEEEEccC-CCCHHH-HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEE
Q 047395          153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYD-FLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENIL  229 (432)
Q Consensus       153 ~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~-~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIl  229 (432)
                         +++.....+...  ..||||||+ |+++.. .+..   ..++...+..++.|++.+|.+||+ +||+||||||+|||
T Consensus        79 ---~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIl  150 (190)
T cd05145          79 ---AGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNIL  150 (190)
T ss_pred             ---CCCCCceEEEec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEE
Confidence               443211111111  248999999 554433 3433   258889999999999999999999 99999999999999


Q ss_pred             eecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCccccc
Q 047395          230 FVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH  275 (432)
Q Consensus       230 i~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  275 (432)
                      ++                            ++.++|+|||++....
T Consensus       151 l~----------------------------~~~~~liDFG~a~~~~  168 (190)
T cd05145         151 YH----------------------------DGKPYIIDVSQAVELD  168 (190)
T ss_pred             EE----------------------------CCCEEEEEcccceecC
Confidence            64                            3568888888876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10345 hypothetical protein; Provisional

Probab=99.87  E-value=1.6e-21  Score=171.53  Aligned_cols=125  Identities=20%  Similarity=0.223  Sum_probs=101.3

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC---e-EEEE
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN---H-ICIV  174 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~---~-~~lv  174 (432)
                      .+.||+|+||.||.  +..++.. +||++... ....+.+.+|+.++..+.|....|+||++++++++++.   . +.+|
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            46899999999995  6666665 69988643 23456789999999999877777899999999998763   4 3478


Q ss_pred             EccC---CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH-HHHHhCCcEeccCCCCcEEeec
Q 047395          175 FEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV-AFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       175 ~e~~---~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL-~~LH~~~ivHrDlkp~NIli~~  232 (432)
                      +||+   +++|.+++.+.   .+++.  ..++.|++.++ +|||+++|+||||||+|||++.
T Consensus        84 ~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~  140 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQR  140 (210)
T ss_pred             ecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEec
Confidence            9995   48999999763   36665  35678888888 9999999999999999999864

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.87  E-value=2.2e-21  Score=167.43  Aligned_cols=181  Identities=17%  Similarity=0.144  Sum_probs=133.4

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhH-----hHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE-----AAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~-----~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      +...|++|+||+|+++..  .+..++.+.+........     .+.+|+++|+.|.+.    +++++++++    +..|+
T Consensus         6 ~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~----~~vP~ll~~----~~~~l   75 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL----PRTPRLLHW----DGRHL   75 (218)
T ss_pred             cceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC----CCCCEEEEE----cCEEE
Confidence            567899999999998754  678888887765443222     578899999999652    667777775    34699


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccC-CCCcEEeecCCccccCCcccccCCCCCc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDL-KPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl-kp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +|||+ |.+|.+.+..        . ...++.|++.+|.++|++||+|||| ||+|||++.                   
T Consensus        76 vmeyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~-------------------  127 (218)
T PRK12274         76 DRSYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQE-------------------  127 (218)
T ss_pred             EEeeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcC-------------------
Confidence            99999 8888654321        1 1357889999999999999999999 799999643                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCcc----------------ccccCCCcchhHHHhCC-CCC-ccchHHHHHHHHHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEHN----------------YIVSTRHYRAPEVILGL-GWS-YPCDMWSVGCILIE  313 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~----------------~~~gt~~y~aPE~~~~~-~~~-~~sDiwSlGvil~e  313 (432)
                              ++.++|+|||++........                ....++.|++|+...-. ..+ ...+.++.|+-+|.
T Consensus       128 --------~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~  199 (218)
T PRK12274        128 --------DGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYR  199 (218)
T ss_pred             --------CCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHH
Confidence                    45577778877764333221                01257888999866433 233 56788899999999


Q ss_pred             HHhCCCCCCCCC
Q 047395          314 LCSGEALFQTHE  325 (432)
Q Consensus       314 lltg~~pf~~~~  325 (432)
                      ++|+..++.+..
T Consensus       200 ~~~~~~~~~~~~  211 (218)
T PRK12274        200 FVTRRVLHWEDN  211 (218)
T ss_pred             HHhccCCccccC
Confidence            999998876543

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.86  E-value=2.1e-22  Score=174.85  Aligned_cols=241  Identities=15%  Similarity=0.196  Sum_probs=180.8

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeec---hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ...++.+|.+...|..|+|++.  |..+++|+++-   .......+..|.-.|+.+.|     |||+.+++.+....++.
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifsh-----pnilpvlgacnsppnlv  263 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSH-----PNILPVLGACNSPPNLV  263 (448)
T ss_pred             hhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecC-----CchhhhhhhccCCCCce
Confidence            4566778999999999999887  55678888752   22334567778777887777     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      ++..|+ -|+|+.+|.....-..+..++.+++.+|+.|++|||+..  |.---|....++|+++-+.+|           
T Consensus       264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltari-----------  332 (448)
T KOG0195|consen  264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARI-----------  332 (448)
T ss_pred             EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhe-----------
Confidence            999999 899999999876666788999999999999999999863  333467888888765433222           


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCC---ccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWS---YPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                    ..+|--++..    .....-.|.||+||.+...+-+   .++|+|||++++|||.|...||...+.
T Consensus       333 --------------smad~kfsfq----e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlsp  394 (448)
T KOG0195|consen  333 --------------SMADTKFSFQ----EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSP  394 (448)
T ss_pred             --------------ecccceeeee----ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCc
Confidence                          2223222111    1112347889999999887643   578999999999999999999998777


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+.-..|.                                               +..+....++.++..+..|+.-|+.
T Consensus       395 mecgmkia-----------------------------------------------leglrv~ippgis~hm~klm~icmn  427 (448)
T KOG0195|consen  395 MECGMKIA-----------------------------------------------LEGLRVHIPPGISRHMNKLMNICMN  427 (448)
T ss_pred             hhhhhhhh-----------------------------------------------hccccccCCCCccHHHHHHHHHHhc
Confidence            65432221                                               1112223345677778899999999


Q ss_pred             cCCCCCCCHHHHh
Q 047395          407 YDPSSRLTAHDAL  419 (432)
Q Consensus       407 ~dP~~R~ta~elL  419 (432)
                      .||.+||..+.++
T Consensus       428 edpgkrpkfdmiv  440 (448)
T KOG0195|consen  428 EDPGKRPKFDMIV  440 (448)
T ss_pred             CCCCcCCCcceeh
Confidence            9999999988765

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=2.1e-21  Score=199.75  Aligned_cols=199  Identities=24%  Similarity=0.372  Sum_probs=155.0

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      ...|.|.+.||+|+||+||+|.... |+.||||+-+....+.-.+.  .+++.+|+  ...-+-|..+...+...+..+|
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~--~q~~~RLk--~~~~~~~~~~~~a~~~~~~S~l  771 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYIC--LQVMERLK--PQMLPSIMHISSAHVFQNASVL  771 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeeh--HHHHHhhc--hhhhcchHHHHHHHccCCccee
Confidence            4679999999999999999999877 99999998765333321111  12233333  0111456667777777788899


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      |+||. -|+|.+++...  +.+++..+..++.|++.-++.||..+|||+||||+|+|+...-.   .             
T Consensus       772 v~ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~---~-------------  833 (974)
T KOG1166|consen  772 VSEYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREIC---A-------------  833 (974)
T ss_pred             eeeccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccC---C-------------
Confidence            99999 99999999854  47999999999999999999999999999999999999864210   0             


Q ss_pred             ccccCCCCCCeEEeecCCccccc-----CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEH-----QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                          -....-++|+|||.+-...     ..-...++|-.+-.+|+..|..++..+|.|.|+.+++-||.|++
T Consensus       834 ----~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  834 ----DSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             ----CCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence                1225568999999774321     12234578999999999999999999999999999999999965

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.83  E-value=1.7e-21  Score=184.36  Aligned_cols=185  Identities=31%  Similarity=0.447  Sum_probs=130.6

Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNN-YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .++||.|++| ..+|.++|.... ....+....+.++.|++.|++|   +|.+|+|+||.||++..++.+||.|||+...
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts  405 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS  405 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence            4689999999 899999997432 2456778899999999999999   9999999999999987766666666666432


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                      .....                  .........+.-+||..||+||.+.+..|+.++||||||++|+||+.   +|..  .
T Consensus       406 ~~~~~------------------~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T--~  462 (516)
T KOG1033|consen  406 QDKDE------------------TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFST--Q  462 (516)
T ss_pred             cccCC------------------cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---Hhcc--H
Confidence            11100                  00111123344689999999999999999999999999999999997   2221  1


Q ss_pred             HHHHHHHHHH-hCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          327 LEHLAMMERV-LGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       327 ~~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .+..+.+... -+.+|+..+..                                              .+.-.+|+++||
T Consensus       463 ~er~~t~~d~r~g~ip~~~~~d----------------------------------------------~p~e~~ll~~ll  496 (516)
T KOG1033|consen  463 FERIATLTDIRDGIIPPEFLQD----------------------------------------------YPEEYTLLQQLL  496 (516)
T ss_pred             HHHHHhhhhhhcCCCChHHhhc----------------------------------------------CcHHHHHHHHhc
Confidence            1111211111 12333222111                                              111358999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~  425 (432)
                      .+.|.+||++.+.--|+|.+
T Consensus       497 s~~p~~RP~~~~~~~~~~~~  516 (516)
T KOG1033|consen  497 SPSPEERPSAIEVALHEFLQ  516 (516)
T ss_pred             CCCcccCchHHHHhhhhhcC
Confidence            99999999988888888763

>smart00090 RIO RIO-like kinase

Probab=99.83  E-value=1.8e-20  Score=169.00  Aligned_cols=142  Identities=23%  Similarity=0.199  Sum_probs=107.1

Q ss_pred             ceEEEeeeecccceEEEEEE-ecCCCcEEEEEEeechhh-------------------------hhHhHHHHHHHHHHHH
Q 047395           96 RYKILRKIGEGTFGQVLDCL-DRETGETVAIKVVRSIKK-------------------------YREAAMTEIDVLELLK  149 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~-~~~~~~~vaiK~~~~~~~-------------------------~~~~~~~E~~~l~~l~  149 (432)
                      -|++.+.||+|+||.||+|. +..+|+.||||+++....                         ....+..|+.++..+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            38889999999999999998 667899999999874321                         1123567999999997


Q ss_pred             hcCCCCCceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCCc
Q 047395          150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR-LIHTDLKPEN  227 (432)
Q Consensus       150 ~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~N  227 (432)
                      +.   +..+..++++    ...++||||+ |.+|...+....  .+....+..++.||+.+|.+||++| |+||||||+|
T Consensus       109 ~~---~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~N  179 (237)
T smart00090      109 EA---GVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV--EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYN  179 (237)
T ss_pred             hc---CCCCCeeeEe----cCceEEEEEecCCcccccccccC--CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhh
Confidence            52   1223333332    2348999999 667766543322  4666778899999999999999999 9999999999


Q ss_pred             EEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccc
Q 047395          228 ILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE  274 (432)
Q Consensus       228 Ili~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  274 (432)
                      |+++                            .+.++|+|||.+...
T Consensus       180 Ili~----------------------------~~~i~LiDFg~a~~~  198 (237)
T smart00090      180 ILVH----------------------------DGKVVIIDVSQSVEL  198 (237)
T ss_pred             EEEE----------------------------CCCEEEEEChhhhcc
Confidence            9964                            346889999987643

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.79  E-value=1.6e-18  Score=154.60  Aligned_cols=132  Identities=23%  Similarity=0.315  Sum_probs=103.8

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh---------hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      +.||+|++|.||+|.+  .|..|++|+.....         .......+|+.++..+.+     +++.....++...+..
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~i~~p~~~~~~~~~~   74 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARK-----AGVNVPAVYFVDPENF   74 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCCeEEEEeCCCC
Confidence            5799999999999986  57889999865311         122457789999999887     5554434444455678


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      ++||||+ |++|.+++....     . ....++.+++.+|.+||+.|++|+|++|+|||++                   
T Consensus        75 ~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-------------------  129 (211)
T PRK14879         75 IIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-------------------  129 (211)
T ss_pred             EEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-------------------
Confidence            8999999 899999987532     2 7888999999999999999999999999999964                   


Q ss_pred             ccccccCCCCCCeEEeecCCccc
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAY  273 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~  273 (432)
                               .+.++|+|||.+..
T Consensus       130 ---------~~~~~liDf~~a~~  143 (211)
T PRK14879        130 ---------GGKIYLIDFGLAEF  143 (211)
T ss_pred             ---------CCCEEEEECCcccC
Confidence                     34578889987765

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.76  E-value=8.1e-18  Score=148.61  Aligned_cols=128  Identities=23%  Similarity=0.273  Sum_probs=96.9

Q ss_pred             eeecccceEEEEEEecCCCcEEEEEEeechh---------hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395          102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIK---------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus       102 ~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .||+|+||.||+|..  ++..|++|+.....         .....+.+|++++..+.+...   ++..++.  ...+..+
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i---~~p~~~~--~~~~~~~   73 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGV---NTPVVYD--VDPDNKT   73 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCC---CCCEEEE--EECCCCE
Confidence            379999999999984  57889999864211         112456789999999987221   2233333  3345578


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ |++|.+++....   .      .++.|++.+|.+||+.|++|+|++|+||+++                    
T Consensus        74 lv~e~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~--------------------  124 (199)
T TIGR03724        74 IVMEYIEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR--------------------  124 (199)
T ss_pred             EEEEEECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE--------------------
Confidence            999999 999999876532   1      7899999999999999999999999999964                    


Q ss_pred             cccccCCCCCCeEEeecCCccc
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAY  273 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~  273 (432)
                              .+.++++|||.+..
T Consensus       125 --------~~~~~liDfg~a~~  138 (199)
T TIGR03724       125 --------DDKLYLIDFGLGKY  138 (199)
T ss_pred             --------CCcEEEEECCCCcC
Confidence                    35688888887765

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.76  E-value=5.9e-18  Score=149.26  Aligned_cols=136  Identities=27%  Similarity=0.314  Sum_probs=100.6

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-----------------------hhhHhHHHHHHHHHHHHhcCC
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-----------------------KYREAAMTEIDVLELLKRYDR  153 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----------------------~~~~~~~~E~~~l~~l~~~~~  153 (432)
                      |.+.+.||.|+||.||+|... +|+.||||+++...                       ........|+.++..+.+.. 
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-   94 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG-   94 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC-
Confidence            788899999999999999874 79999999875321                       01123567888888887621 


Q ss_pred             CCCceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec
Q 047395          154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       154 ~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  232 (432)
                        ..+...++.    ...++||||+ |++|.+...        ......++.+++.++.++|+.||+||||||+||+++ 
T Consensus        95 --i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~-  159 (198)
T cd05144          95 --FPVPKPIDW----NRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD-  159 (198)
T ss_pred             --CCCCceeec----CCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc-
Confidence              123333332    3458999999 888866532        134567889999999999999999999999999964 


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCccccc
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH  275 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  275 (432)
                                                .++.++|+|||.+....
T Consensus       160 --------------------------~~~~~~liDfg~~~~~~  176 (198)
T cd05144         160 --------------------------DDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             --------------------------CCCcEEEEECCccccCC
Confidence                                      45678888888775433

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.75  E-value=2.7e-18  Score=165.81  Aligned_cols=196  Identities=20%  Similarity=0.229  Sum_probs=140.5

Q ss_pred             CCceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-EeccCCCCcEEeec
Q 047395          155 GSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL-IHTDLKPENILFVS  232 (432)
Q Consensus       155 ~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlkp~NIli~~  232 (432)
                      |.|+.++++.+.++...++|.+|| .|+|.|.+.... ..++......+++.|+.||.|||...| .|+.++..|++++.
T Consensus         6 h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~   84 (484)
T KOG1023|consen    6 HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDS   84 (484)
T ss_pred             hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeee
Confidence            489999999999999999999999 999999998744 468888999999999999999998766 99999999999665


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCC-------CCc
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLG-------WSY  300 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~~~  300 (432)
                      ...                           +||+|||+......     ......-...|.|||.+.+..       .+.
T Consensus        85 ~w~---------------------------lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~  137 (484)
T KOG1023|consen   85 RWV---------------------------LKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQ  137 (484)
T ss_pred             eEE---------------------------EEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccc
Confidence            544                           55555554433321     111112345699999998742       356


Q ss_pred             cchHHHHHHHHHHHHhCCCCCCCCCc----HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHh
Q 047395          301 PCDMWSVGCILIELCSGEALFQTHEN----LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV  376 (432)
Q Consensus       301 ~sDiwSlGvil~elltg~~pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (432)
                      +.||||+|++++|+++.+.||.....    .+....+.+ .+..+                           .++.+   
T Consensus       138 ~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~-~~~~~---------------------------~rP~i---  186 (484)
T KOG1023|consen  138 KGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK-GGSNP---------------------------FRPSI---  186 (484)
T ss_pred             cCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh-cCCCC---------------------------cCcch---
Confidence            79999999999999999999975322    122222222 00000                           00000   


Q ss_pred             hcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                                ... ....+.+..++++||..+|.+||+++++-.
T Consensus       187 ----------~~~-~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  187 ----------ELL-NELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             ----------hhh-hhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence                      000 023335789999999999999999988753

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=1.1e-19  Score=183.43  Aligned_cols=257  Identities=21%  Similarity=0.283  Sum_probs=186.1

Q ss_pred             CceEEEeeeecccceEEEEEEecC-CCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRE-TGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~-~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ..|.+.+.||+|+|+.|-.+.... +...+|.|.+....   ...+....|..+-+.+..    |.|++.+++.......
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~----h~n~~~~~~~~~~~~~   95 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSK----HSNTVHMIEPSSSPRS   95 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccc----cccccccCCccCCCcc
Confidence            357788889999999998887643 34457777664322   223344446655555542    5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCcEeccCCCCcEEeecCC-ccccCCcccccCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILFVSPE-YLKIPDYKVTARS  247 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIli~~~~-~~k~~df~~~~~~  247 (432)
                      .+++++|. |+++.+.+........+...+..++.|+..+|.|+| ..++.|+||||+|.+++..+ .++++|||++   
T Consensus        96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~A---  172 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLA---  172 (601)
T ss_pred             cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhh---
Confidence            99999999 999999884322225788889999999999999999 99999999999999977766 5555555554   


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccC------Ccccccc-CCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQ------EHNYIVS-TRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~g-t~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~  319 (432)
                                              .....      .....+| ++.|+|||...+.. ..+..|+||+|+++.-+++|..
T Consensus       173 ------------------------t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~  228 (601)
T KOG0590|consen  173 ------------------------TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGEL  228 (601)
T ss_pred             ------------------------ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCC
Confidence                                    32221      1122467 99999999999854 4678999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      |+.........                     ...+....                       .......+...+....+
T Consensus       229 p~~~~~~~~~~---------------------~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~  264 (601)
T KOG0590|consen  229 PWDFPSRKDGR---------------------YSSWKSNK-----------------------GRFTQLPWNSISDQAHD  264 (601)
T ss_pred             Ccccccccccc---------------------ceeecccc-----------------------cccccCccccCChhhhh
Confidence            99754432200                     00000000                       00001112344556789


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ++.++|..+|..|.+.+++..+||+..
T Consensus       265 ~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  265 LLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cccccccCCchhccccccccccccccc
Confidence            999999999999999999999999987

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.73  E-value=3.3e-17  Score=166.00  Aligned_cols=139  Identities=24%  Similarity=0.233  Sum_probs=105.4

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEee-c---hh-----hhhHhHHHHHHHHHHHHhcCCCCCceeE
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-S---IK-----KYREAAMTEIDVLELLKRYDRSGSRCVQ  160 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~-~---~~-----~~~~~~~~E~~~l~~l~~~~~~~~~iv~  160 (432)
                      .+.....|...+.||+|+||+||++.+..  ..+++|+.. +   ..     ...+.+.+|++++..+++     ++++.
T Consensus       328 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~i~~  400 (535)
T PRK09605        328 EEEVKRRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARR-----AGVPT  400 (535)
T ss_pred             ccccccccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcc-----cCCCe
Confidence            33444566778999999999999997654  344444321 1   11     123467789999999987     66666


Q ss_pred             eecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccC
Q 047395          161 IRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIP  239 (432)
Q Consensus       161 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~  239 (432)
                      ...+.......++||||+ |++|.+++.          ....++.|++.+|.+||+.||+||||||+|||+.        
T Consensus       401 p~~~~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~--------  462 (535)
T PRK09605        401 PVIYDVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR--------  462 (535)
T ss_pred             eEEEEEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE--------
Confidence            555555556778999999 999999875          3467899999999999999999999999999962        


Q ss_pred             CcccccCCCCCccccccCCCCCCeEEeecCCccc
Q 047395          240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY  273 (432)
Q Consensus       240 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  273 (432)
                                          ++.++|+|||+++.
T Consensus       463 --------------------~~~~~liDFGla~~  476 (535)
T PRK09605        463 --------------------DDRLYLIDFGLGKY  476 (535)
T ss_pred             --------------------CCcEEEEeCccccc
Confidence                                34688999998764

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=2.2e-17  Score=159.55  Aligned_cols=261  Identities=21%  Similarity=0.251  Sum_probs=188.7

Q ss_pred             eecCceEEEeeeec--ccceEEEEEEe--cCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc
Q 047395           92 NLTSRYKILRKIGE--GTFGQVLDCLD--RETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW  164 (432)
Q Consensus        92 ~~~~~y~i~~~lg~--G~~g~V~~a~~--~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~  164 (432)
                      .+...+.+.+.+|.  |.+|.||.+..  ..++..+|+|.-+.-   ......-.+|+.....    ...|+++++.+..
T Consensus       111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~----i~~~~~~v~~~~~  186 (524)
T KOG0601|consen  111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHK----IDSHENPVRDSPA  186 (524)
T ss_pred             hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccc----cCccccccccCcc
Confidence            34567889999999  99999999988  888999999974311   1112222334433222    3356889998888


Q ss_pred             cccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH----HHHHHHhCCcEeccCCCCcEEeecC-CccccC
Q 047395          165 FDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE----CVAFMHDLRLIHTDLKPENILFVSP-EYLKIP  239 (432)
Q Consensus       165 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~----aL~~LH~~~ivHrDlkp~NIli~~~-~~~k~~  239 (432)
                      ++..+..++-+|+|+.+|.++..... .-++...++..+.+...    ||.++|..+|+|-|+||+||+...+ ..++++
T Consensus       187 ~e~~~~lfiqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~  265 (524)
T KOG0601|consen  187 WEGSGILFIQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLT  265 (524)
T ss_pred             cccCCcceeeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecC
Confidence            99999999999999999999987654 34889999999999999    9999999999999999999998877 677777


Q ss_pred             CcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       240 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                      ||++.                  .+|.|.+++...... ....|...|++||+..+ .++...||+|||.++.+..++..
T Consensus       266 df~~v------------------~~i~~~~~~~~~~~~-~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~  325 (524)
T KOG0601|consen  266 DFGLV------------------SKISDGNFSSVFKVS-KRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSH  325 (524)
T ss_pred             Cccee------------------EEccCCccccceeee-ecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcc
Confidence            77763                  233333333222211 11245667999999876 56889999999999999998877


Q ss_pred             CCCCC--CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          320 LFQTH--ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       320 pf~~~--~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ++...  +....+..+     .+|                                             .+....-+..+
T Consensus       326 ~~~~g~~~~W~~~r~~-----~ip---------------------------------------------~e~~~~~s~~l  355 (524)
T KOG0601|consen  326 LPSVGKNSSWSQLRQG-----YIP---------------------------------------------LEFCEGGSSSL  355 (524)
T ss_pred             cccCCCCCCccccccc-----cCc---------------------------------------------hhhhcCcchhh
Confidence            66433  111100000     011                                             11122334446


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ...+..|+..+|-.|++++.+++|+++..-
T Consensus       356 ~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~  385 (524)
T KOG0601|consen  356 RSVTSQMLDEDPRLRLTAQILTALNVIHSK  385 (524)
T ss_pred             hhHHHHhcCcchhhhhHHHHHhccccccch
Confidence            678999999999999999999999998754

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.70  E-value=7.7e-17  Score=140.86  Aligned_cols=134  Identities=26%  Similarity=0.293  Sum_probs=90.9

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeechhhh---hHh----------------------HHHHHHHHHHHHhcCCC
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY---REA----------------------AMTEIDVLELLKRYDRS  154 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~---~~~----------------------~~~E~~~l~~l~~~~~~  154 (432)
                      .+.||+|+||+||+|.+. +++.||||+++.....   ...                      ...|...+..+.+..  
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--   78 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG--   78 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC--
Confidence            468999999999999976 7999999998643211   111                      134555555555421  


Q ss_pred             CCceeEeecccccCCeEEEEEccC-CCCHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEee
Q 047395          155 GSRCVQIRNWFDYRNHICIVFEML-GPSLY-DFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFV  231 (432)
Q Consensus       155 ~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~-~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~  231 (432)
                       ..+.+.+..    ...++||||+ ++++. ..+....   .. ..+..++.+++.++.++|. .||+|+||||+||+++
T Consensus        79 -~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~  149 (187)
T cd05119          79 -VPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD  149 (187)
T ss_pred             -CCCCceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence             122333322    2358999999 53322 1121111   11 6678899999999999999 9999999999999964


Q ss_pred             cCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCccc
Q 047395          232 SPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY  273 (432)
Q Consensus       232 ~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  273 (432)
                                                  ++.++|+|||.+..
T Consensus       150 ----------------------------~~~~~liDfg~a~~  163 (187)
T cd05119         150 ----------------------------DGKVYIIDVPQAVE  163 (187)
T ss_pred             ----------------------------CCcEEEEECccccc
Confidence                                        45678888887754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.68  E-value=2.2e-17  Score=167.43  Aligned_cols=283  Identities=21%  Similarity=0.289  Sum_probs=197.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhH----hHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~----~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +.+.+.+.+.+|.++.++.+.-..+|...++|+.........    ....+-.++..     ..+|.++...-.+.....
T Consensus       804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~-----p~~P~v~~~~~s~~~rsP  878 (1205)
T KOG0606|consen  804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILIT-----PRSPAVVRSFPSFPCRSP  878 (1205)
T ss_pred             ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCcccc-----CCCCceecccCCCCCCCC
Confidence            457788899999999999998888887777877654332221    11111111111     112444444434455678


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .+||++|. +++|...|+..+  ..+.+-++..+..+..+++|||...+.|+|++|.|+|+..+|+.++++|+.......
T Consensus       879 ~~L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~  956 (1205)
T KOG0606|consen  879 LPLVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL  956 (1205)
T ss_pred             cchhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccc
Confidence            99999999 889999998765  578888888999999999999999999999999999999999999999984432211


Q ss_pred             CccccccCCCCCCeEEeecCCccccc-------CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEH-------QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                      .......-........-+++.+....       .......||+.|.|||...+......+|+|++|++++|.++|.+||.
T Consensus       957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen  957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred             ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence            11000000000111111222111111       11233578999999999999999999999999999999999999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ..........|.                       ++...||...                       ...++.+.+++.
T Consensus      1037 a~tpq~~f~ni~-----------------------~~~~~~p~g~-----------------------~~~s~~aq~~~~ 1070 (1205)
T KOG0606|consen 1037 AETPQQIFENIL-----------------------NRDIPWPEGP-----------------------EEGSYEAQDLIN 1070 (1205)
T ss_pred             Ccchhhhhhccc-----------------------cCCCCCCCCc-----------------------cccChhhhhhhh
Confidence            776655443321                       2233454432                       234566789999


Q ss_pred             HccccCCCCCCCHH---HHhcCCCCCCCccC
Q 047395          403 GLLRYDPSSRLTAH---DALKHPFFTRDYYR  430 (432)
Q Consensus       403 ~~L~~dP~~R~ta~---elL~hp~f~~~~~~  430 (432)
                      ..|..+|.+|..+.   ++-.||||+...++
T Consensus      1071 ~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1071 RLLTEEPTQRLGAKGAAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred             hhhccCchhccCcccccccccCCccCCCCcc
Confidence            99999999999887   89999999987764

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.67  E-value=7.8e-16  Score=139.13  Aligned_cols=134  Identities=21%  Similarity=0.225  Sum_probs=96.7

Q ss_pred             eeee-cccceEEEEEEecCCCcEEEEEEeechh--------------hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395          101 RKIG-EGTFGQVLDCLDRETGETVAIKVVRSIK--------------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus       101 ~~lg-~G~~g~V~~a~~~~~~~~vaiK~~~~~~--------------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      ..|| .||.|+||.+...  +..++||.+....              .....+.+|+.++..|.+..   ..++..+++.
T Consensus        37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~g---i~vP~pl~~~  111 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAG---LPVPRPIAAR  111 (239)
T ss_pred             ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCC---CCCceeEeee
Confidence            3577 7888888888654  7889999885311              12345778999999998732   2234455443


Q ss_pred             cc-CC---eEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccC
Q 047395          166 DY-RN---HICIVFEML-G-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIP  239 (432)
Q Consensus       166 ~~-~~---~~~lv~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~  239 (432)
                      .. ..   ..++|||++ | .+|.+++...   .+++..    +.||+.+|.+||++||+||||||+|||++        
T Consensus       112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~--------  176 (239)
T PRK01723        112 VVRHGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLD--------  176 (239)
T ss_pred             eeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEc--------
Confidence            22 22   235999999 5 5899988653   356543    57899999999999999999999999964        


Q ss_pred             CcccccCCCCCccccccCCCCCCeEEeecCCccc
Q 047395          240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY  273 (432)
Q Consensus       240 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  273 (432)
                                         .++.++|+|||.+..
T Consensus       177 -------------------~~~~v~LIDfg~~~~  191 (239)
T PRK01723        177 -------------------PDGKFWLIDFDRGEL  191 (239)
T ss_pred             -------------------CCCCEEEEECCCccc
Confidence                               345789999997654

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.64  E-value=1.7e-15  Score=127.20  Aligned_cols=132  Identities=24%  Similarity=0.324  Sum_probs=105.9

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      +++.||.|.++.||++...  +..+++|....... ...+..|+.++..+.+.   ..++++++.+.+..+..+++|||+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~---~~~~p~~~~~~~~~~~~~~v~e~~   75 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-GADREREVAILQLLARK---GLPVPKVLASGESDGWSYLLMEWI   75 (155)
T ss_pred             cceecccccccceEEEEec--CCeEEEEecCCCCc-hhHHHHHHHHHHHHHHc---CCCCCeEEEEcCCCCccEEEEEec
Confidence            4678999999999999875  37899999865433 45788999999999874   356778888887778899999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL---RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                       +..+..+         +......++.+++.+|.+||..   +++|+|++|+||+++.                      
T Consensus        76 ~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~----------------------  124 (155)
T cd05120          76 EGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD----------------------  124 (155)
T ss_pred             CCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC----------------------
Confidence             6665433         4556677899999999999984   7999999999999653                      


Q ss_pred             ccCCCCCCeEEeecCCcc
Q 047395          255 KRLPKSSAIKVIDFGSTA  272 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~  272 (432)
                           .+.++++|||.+.
T Consensus       125 -----~~~~~l~Df~~~~  137 (155)
T cd05120         125 -----GKILGIIDWEYAG  137 (155)
T ss_pred             -----CcEEEEEeccccc
Confidence                 4568888888764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=5.8e-16  Score=138.56  Aligned_cols=240  Identities=19%  Similarity=0.254  Sum_probs=152.9

Q ss_pred             EEEEEEecCCCcEEEEEEee----chh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC-----CeEEEEEccC-
Q 047395          110 QVLDCLDRETGETVAIKVVR----SIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR-----NHICIVFEML-  178 (432)
Q Consensus       110 ~V~~a~~~~~~~~vaiK~~~----~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~-----~~~~lv~e~~-  178 (432)
                      .||++-++..|.+|+.--++    +.. ...+....-...|..+.|     .|+++++.|+.+.     ....++.||+ 
T Consensus        81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvH-----snlvkfH~yw~d~K~~e~~rviFiteyms  155 (458)
T KOG1266|consen   81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVH-----SNLVKFHKYWTDKKYEEKPRVIFITEYMS  155 (458)
T ss_pred             HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHH-----HHHHHHHHhhcccccccccceEEEEeccc
Confidence            46777777777665543332    111 111222223344555666     8899999998754     3578999999 


Q ss_pred             CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC--CcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          179 GPSLYDFLRKNN--YRPFPVDLVREIGRQLLECVAFMHDL--RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       179 ~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      .|+|.++|++..  ...+.....++|+.||+.||.|||+.  -|+|+++..+-|++..+|.+|+..---..         
T Consensus       156 sgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s---------  226 (458)
T KOG1266|consen  156 SGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS---------  226 (458)
T ss_pred             chhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccc---------
Confidence            999999998632  24588889999999999999999987  59999999999998776666552110000         


Q ss_pred             ccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC-CCCCCcHHHHHHH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL-FQTHENLEHLAMM  333 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p-f~~~~~~~~~~~i  333 (432)
                          -...++.+       .........+-++|.|||.=..-..+.++|||++|....+|..+..- -.+.+....-..+
T Consensus       227 ----~h~s~~~~-------~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~i  295 (458)
T KOG1266|consen  227 ----THPSVNST-------REAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENI  295 (458)
T ss_pred             ----cchhhhhh-------hHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhh
Confidence                00000000       00111112356789999976655677899999999999999887653 2222211111111


Q ss_pred             HHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCC
Q 047395          334 ERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRL  413 (432)
Q Consensus       334 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~  413 (432)
                      .+.....                                                    ..+--+++|.+||+..|..||
T Consensus       296 a~~i~~l----------------------------------------------------en~lqr~~i~kcl~~eP~~rp  323 (458)
T KOG1266|consen  296 ANVIIGL----------------------------------------------------ENGLQRGSITKCLEGEPNGRP  323 (458)
T ss_pred             hhheeec----------------------------------------------------cCccccCcCcccccCCCCCCc
Confidence            1110000                                                    000024799999999999999


Q ss_pred             CHHHHhcCCCCCC
Q 047395          414 TAHDALKHPFFTR  426 (432)
Q Consensus       414 ta~elL~hp~f~~  426 (432)
                      +|.++|.||-+-+
T Consensus       324 ~ar~llfHpllfe  336 (458)
T KOG1266|consen  324 DARLLLFHPLLFE  336 (458)
T ss_pred             chhhhhcCceeee
Confidence            9999999997643

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.52  E-value=1e-13  Score=136.11  Aligned_cols=142  Identities=19%  Similarity=0.241  Sum_probs=94.5

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhhh-----------------------------------------hHhHH
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-----------------------------------------REAAM  139 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-----------------------------------------~~~~~  139 (432)
                      +.||+|++|.||+|+.. +|+.||||+.+..-..                                         .-.+.
T Consensus       123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            57999999999999864 6899999998532100                                         00244


Q ss_pred             HHHHHHHHHHhcCCCCCceeEeecc-cccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHH-HHHHHHhC
Q 047395          140 TEIDVLELLKRYDRSGSRCVQIRNW-FDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE-CVAFMHDL  216 (432)
Q Consensus       140 ~E~~~l~~l~~~~~~~~~iv~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~-aL~~LH~~  216 (432)
                      +|...+..+...-..++++ .+-.. .+..+..+|||||+ |++|.++..... ...+   ...++.+++. .+..+|..
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       202 REAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQVLRD  276 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhC
Confidence            5666666665433333333 22222 22334578999999 889988765432 1122   3446666665 47889999


Q ss_pred             CcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCccccc
Q 047395          217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH  275 (432)
Q Consensus       217 ~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  275 (432)
                      |++|+|+||.||++.                           .++.++++|||++....
T Consensus       277 g~~H~D~hPgNilv~---------------------------~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       277 GFFHADLHPGNIFVL---------------------------KDGKIIALDFGIVGRLS  308 (437)
T ss_pred             CceeCCCCcccEEEC---------------------------CCCcEEEEeCCCeeECC
Confidence            999999999999964                           34568888888776543

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.50  E-value=6e-13  Score=115.06  Aligned_cols=138  Identities=19%  Similarity=0.247  Sum_probs=97.8

Q ss_pred             EeeeecccceEEEEEEecC------CCcEEEEEEeech-------h----------------hhh----HhHHHHHHHHH
Q 047395          100 LRKIGEGTFGQVLDCLDRE------TGETVAIKVVRSI-------K----------------KYR----EAAMTEIDVLE  146 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~------~~~~vaiK~~~~~-------~----------------~~~----~~~~~E~~~l~  146 (432)
                      ...||.|--+.||.|....      .+..+|||+.+..       .                ...    ....+|.+.|.
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3578999999999998653      3579999997520       0                011    12347999999


Q ss_pred             HHHhcCCCCCceeEeecccccCCeEEEEEccCCCC-HH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HhCCcEeccC
Q 047395          147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS-LY-DFLRKNNYRPFPVDLVREIGRQLLECVAFM-HDLRLIHTDL  223 (432)
Q Consensus       147 ~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~-L~-~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~ivHrDl  223 (432)
                      ++......   +...+.+    ..-+|||||++++ +. ..++..   .++...+..+..+++.+|..| |+.||||+||
T Consensus        82 rl~~~Gv~---vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDL  151 (197)
T cd05146          82 RMQKAGIP---CPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSMMKQLYKECNLVHADL  151 (197)
T ss_pred             HHHHcCCC---CCeEEEe----cCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            99875433   3444443    3467999999543 32 123221   356667788899999999999 8999999999


Q ss_pred             CCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCccccc
Q 047395          224 KPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH  275 (432)
Q Consensus       224 kp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  275 (432)
                      ++.|||+.                            ++.+.|+|||.+....
T Consensus       152 s~~NIL~~----------------------------~~~v~iIDF~qav~~~  175 (197)
T cd05146         152 SEYNMLWH----------------------------DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             CHHHEEEE----------------------------CCcEEEEECCCceeCC
Confidence            99999963                            2468999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.48  E-value=4.8e-14  Score=139.97  Aligned_cols=150  Identities=21%  Similarity=0.323  Sum_probs=94.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-----------------------------------hhhH---
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-----------------------------------KYRE---  136 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----------------------------------~~~~---  136 (432)
                      ..|.. +.||+|++|.||+|+.+.+|+.||||++++.-                                   ....   
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            45766 79999999999999998889999999986421                                   0011   


Q ss_pred             ---hHHHHHHHHHHHHhcCCCCCceeEeeccc-ccCCeEEEEEccC-CCCHHHHH--HhcCC--CCCCHHHHHHHHHHHH
Q 047395          137 ---AAMTEIDVLELLKRYDRSGSRCVQIRNWF-DYRNHICIVFEML-GPSLYDFL--RKNNY--RPFPVDLVREIGRQLL  207 (432)
Q Consensus       137 ---~~~~E~~~l~~l~~~~~~~~~iv~~~~~~-~~~~~~~lv~e~~-~~~L~~~l--~~~~~--~~l~~~~~~~i~~qi~  207 (432)
                         ++.+|...+..+...-.. ...+.+-.++ +.....+|||||+ |+.|.++.  ...+.  ..+.+..+..++.|++
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~~-~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif  277 (537)
T PRK04750        199 DELDLMREAANASQLRRNFED-SDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF  277 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHccC-CCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence               233444444555432111 2223333322 2245678999999 88998753  32220  0234444455555554


Q ss_pred             HHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC
Q 047395          208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ  276 (432)
Q Consensus       208 ~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~  276 (432)
                             ..|++|+|+||.||+++.+|                       ...+.++++|||+......
T Consensus       278 -------~~GffHaDpHPGNIlv~~~g-----------------------~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        278 -------RDGFFHADMHPGNIFVSYDP-----------------------PENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             -------hCCeeeCCCChHHeEEecCC-----------------------CCCCeEEEEecceEEECCH
Confidence                   58999999999999986543                       1234788888887765443

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.42  E-value=8.9e-13  Score=113.15  Aligned_cols=114  Identities=14%  Similarity=0.138  Sum_probs=82.5

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-  178 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-  178 (432)
                      ++.|+.|.++.||++...  ++.|++|+.............|+.++..+....    .+.+++.+..  ...++|||++ 
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~----~~P~~~~~~~--~~~~lv~e~i~   74 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAG----IGPKLYYFDP--ETGVLITEFIE   74 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhC----CCCceEEEeC--CCCeEEEEecC
Confidence            467899999999999764  788999997654323345678999999987632    1234444433  2347999999 


Q ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-----EeccCCCCcEEee
Q 047395          179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL-----IHTDLKPENILFV  231 (432)
Q Consensus       179 ~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-----vHrDlkp~NIli~  231 (432)
                      |.++.+.    .   .   ....++.+++.+|..||+.++     +|+|++|.||+++
T Consensus        75 G~~l~~~----~---~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~  122 (170)
T cd05151          75 GSELLTE----D---F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD  122 (170)
T ss_pred             CCccccc----c---c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE
Confidence            7776542    0   1   123457899999999999885     9999999999964

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.42  E-value=2.1e-13  Score=132.26  Aligned_cols=250  Identities=20%  Similarity=0.167  Sum_probs=169.0

Q ss_pred             ecCceEEEeeeecccceEEEEEEec-CCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDR-ETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~-~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ...+|..+..||.|.|+.|+.+..+ .++..|++|-+.+.   .........|+.+...+..    |.+++.....+...
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~----~~~~~g~~~~W~~~  338 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGS----HLPSVGKNSSWSQL  338 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhc----ccccCCCCCCcccc
Confidence            4567999999999999999988755 67788999976532   2223344556666666543    36677666655555


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      ...|+-.||| ++++...+.-..  .+.+...+.+..|++.++.++|+..++|+|+||+||++.++|             
T Consensus       339 r~~~ip~e~~~~~s~~l~~~~~~--~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~-------------  403 (524)
T KOG0601|consen  339 RQGYIPLEFCEGGSSSLRSVTSQ--MLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG-------------  403 (524)
T ss_pred             ccccCchhhhcCcchhhhhHHHH--hcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch-------------
Confidence            6677999999 887766553322  478889999999999999999999999999999999987652             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcc--hhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR--APEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                   +..++.|||......-......++..+.  +|+......+..++|++|||..+.+.+++...-....
T Consensus       404 -------------~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~  470 (524)
T KOG0601|consen  404 -------------FFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV  470 (524)
T ss_pred             -------------hhhhccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCcccc
Confidence                         2334445554432111111122233333  5555566678899999999999999998865332111


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .   ...+..                       +  ..                        ........++..+.+.|+
T Consensus       471 ~---~~~i~~-----------------------~--~~------------------------p~~~~~~~~~q~~~kv~~  498 (524)
T KOG0601|consen  471 Q---SLTIRS-----------------------G--DT------------------------PNLPGLKLQLQVLLKVMI  498 (524)
T ss_pred             c---ceeeec-----------------------c--cc------------------------cCCCchHHhhhhhhhhhc
Confidence            0   000000                       0  00                        011122344678899999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ..++..|+.+.++..|.=|.+
T Consensus       499 ~~~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  499 NPDRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             CCccccchhhhhhcccchhhh
Confidence            999999999999998876644

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.41  E-value=2.5e-12  Score=126.06  Aligned_cols=178  Identities=17%  Similarity=0.292  Sum_probs=128.5

Q ss_pred             eeecccceEEE-EEEecCCCcEEEEEEeechhh-hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccCC
Q 047395          102 KIGEGTFGQVL-DCLDRETGETVAIKVVRSIKK-YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG  179 (432)
Q Consensus       102 ~lg~G~~g~V~-~a~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~  179 (432)
                      ...-++.+ +| .|..+.++.+|.|...+.... ..+...+-++.|+.++|     |+|+++++.++..+.+|||+|-+ 
T Consensus        19 ~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRH-----P~Il~yL~t~e~~~~~ylvTErV-   91 (690)
T KOG1243|consen   19 ETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRH-----PNILSYLDTTEEEGTLYLVTERV-   91 (690)
T ss_pred             cccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccC-----chhhhhhhhhcccCceEEEeecc-
Confidence            33334443 34 466677888999998875433 34557778888999998     99999999999999999999987 


Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCC
Q 047395          180 PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP  258 (432)
Q Consensus       180 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  258 (432)
                      ..|..++++     +....+...+.||+.||.||| +++++|++|.-+.|+|+..|.+||++|.+......         
T Consensus        92 ~Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~---------  157 (690)
T KOG1243|consen   92 RPLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASG---------  157 (690)
T ss_pred             ccHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEecccc---------
Confidence            246666765     447778888999999999998 67999999999999999888888877766432111         


Q ss_pred             CCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhC
Q 047395          259 KSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       259 ~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg  317 (432)
                               |+.      ......---.|..|+.+....  ...|.|-|||+++|++.|
T Consensus       158 ---------~~~------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  158 ---------FNA------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             ---------CCc------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence                     110      000111112356666543322  457999999999999999

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.34  E-value=3.9e-11  Score=99.76  Aligned_cols=144  Identities=25%  Similarity=0.255  Sum_probs=106.9

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeec---------hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---------IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---------~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .+..|-+|+-+.|+++.+  .|+.+.||.=..         .+.......+|++.|.++.......|.+.     +.+..
T Consensus        11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~-----~~D~~   83 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLI-----FIDTY   83 (229)
T ss_pred             cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEE-----EEecC
Confidence            567888999999999965  488888885311         12334567789999999887544434332     33344


Q ss_pred             eEEEEEccCCC--CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          170 HICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       170 ~~~lv~e~~~~--~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      .-+|+|||+.|  ++.+++...............++.+|-+.+.-||..+|||+||..+||++.++|             
T Consensus        84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~-------------  150 (229)
T KOG3087|consen   84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDG-------------  150 (229)
T ss_pred             CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCC-------------
Confidence            45788999955  899999876544444444578999999999999999999999999999987644             


Q ss_pred             CCCccccccCCCCCCeEEeecCCccc
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAY  273 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~  273 (432)
                                 ....+.++|||++..
T Consensus       151 -----------~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  151 -----------NQITPILIDFGLSSV  165 (229)
T ss_pred             -----------CcCceEEEeecchhc
Confidence                       344568999998754

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.24  E-value=1.4e-10  Score=97.00  Aligned_cols=129  Identities=22%  Similarity=0.235  Sum_probs=92.4

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeec---------hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRS---------IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---------~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ..+++|+-+.++.+...  |..+++|.=.+         .+...+...+|.+++..++....   ++..++++  +.+..
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV---~~P~v~dv--D~~~~   74 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGV---PVPIVYDV--DPDNG   74 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCeEEEE--cCCCC
Confidence            35788999999998653  55677775311         11224566789999999887533   33344443  34456


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      .|+|||+ |..|.+++...         ...++..+-.-+.-||..||+|+||.++||++..                  
T Consensus        75 ~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~------------------  127 (204)
T COG3642          75 LIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSG------------------  127 (204)
T ss_pred             EEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeC------------------
Confidence            7999999 77788888764         1346677777788899999999999999999743                  


Q ss_pred             ccccccCCCCCCeEEeecCCccc
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAY  273 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~  273 (432)
                                ..+.++|||++..
T Consensus       128 ----------~~i~~IDfGLg~~  140 (204)
T COG3642         128 ----------GRIYFIDFGLGEF  140 (204)
T ss_pred             ----------CcEEEEECCcccc
Confidence                      3389999998764

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.16  E-value=2.7e-10  Score=102.16  Aligned_cols=108  Identities=17%  Similarity=0.160  Sum_probs=76.9

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhh--hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC---CeEEEEE
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR---NHICIVF  175 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~---~~~~lv~  175 (432)
                      +.|+.|.++.||++.... |+.+++|+......  ....+..|..+++.+.+..   .++.+++.+....   +..++||
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~---~~vp~~~~~~~~~~~~~~~~~v~   79 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTG---VPVPKVLALCEDPSVLGTPFYVM   79 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCC---CCCCCEEEECCCCCccCCceEEE
Confidence            578999999999998643 68899999765332  3557889999999987732   2344555554443   3678999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 047395          176 EML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD  215 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  215 (432)
                      ||+ |.+|.+.+..   ..+++.....++.+++.+|..||+
T Consensus        80 e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~  117 (223)
T cd05154          80 ERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHS  117 (223)
T ss_pred             EEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhC
Confidence            999 7777665432   136777777778888888888773

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.14  E-value=1.7e-11  Score=120.72  Aligned_cols=164  Identities=20%  Similarity=0.307  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCcccccc
Q 047395          205 QLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVS  283 (432)
Q Consensus       205 qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~g  283 (432)
                      +++.||.|+|. .++||++|.|++|.++..|.+|++.|+.........+        .....-|+++.       ....-
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~--------~p~~~yd~~lp-------~~~~~  171 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE--------YPFSEYDPPLP-------LLLQP  171 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc--------cccccCCCCCC-------hhhcc
Confidence            44599999995 5899999999999999999999988887643333221        11112222221       11233


Q ss_pred             CCCcchhHHHhCCCCCccchHHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcC
Q 047395          284 TRHYRAPEVILGLGWSYPCDMWSVGCILIELC-SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD  362 (432)
Q Consensus       284 t~~y~aPE~~~~~~~~~~sDiwSlGvil~ell-tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  362 (432)
                      ...|.|||++.+...+.++|++||||++|.+. .|+..+........... ........                     
T Consensus       172 ~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~-~~~~~~~~---------------------  229 (700)
T KOG2137|consen  172 HLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF-SRNLLNAG---------------------  229 (700)
T ss_pred             CcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhh-hhcccccc---------------------
Confidence            56799999999988899999999999999998 56666654432221111 00000000                     


Q ss_pred             CCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          363 WPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                                             .......++.++++=|.++|..++..||++.+++..|||++--
T Consensus       230 -----------------------~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~  272 (700)
T KOG2137|consen  230 -----------------------AFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG  272 (700)
T ss_pred             -----------------------cccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence                                   0011146677899999999999999999999999999998743

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.14  E-value=2.2e-09  Score=98.27  Aligned_cols=140  Identities=20%  Similarity=0.114  Sum_probs=95.7

Q ss_pred             EEEEEecCCCcEEEEEEeechh------------hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--CCeEEEEEc
Q 047395          111 VLDCLDRETGETVAIKVVRSIK------------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--RNHICIVFE  176 (432)
Q Consensus       111 V~~a~~~~~~~~vaiK~~~~~~------------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--~~~~~lv~e  176 (432)
                      |.++..  .|+.|.||......            .....+.+|...+..|.......|..|-+...-..  ....+||||
T Consensus        38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte  115 (268)
T PRK15123         38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE  115 (268)
T ss_pred             EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence            555532  46788888663211            01114779999999998865555554433221111  245789999


Q ss_pred             cCCC--CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          177 MLGP--SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       177 ~~~~--~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ++++  +|.+++......+.+......++.+++..+.-||..||+|+|+++.|||++.+..                   
T Consensus       116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~-------------------  176 (268)
T PRK15123        116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFP-------------------  176 (268)
T ss_pred             eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEecccc-------------------
Confidence            9944  7999986432234667788899999999999999999999999999999864100                   


Q ss_pred             ccCCCCCCeEEeecCCcc
Q 047395          255 KRLPKSSAIKVIDFGSTA  272 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~  272 (432)
                       .-.....+.|+||+.+.
T Consensus       177 -~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        177 -GREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             -CCCCCceEEEEECCccc
Confidence             01234678999999764

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.07  E-value=5e-10  Score=96.62  Aligned_cols=127  Identities=26%  Similarity=0.338  Sum_probs=79.7

Q ss_pred             EEEEEEecCCCcEEEEEEeech---------------------------hhhhHhHHHHHHHHHHHHhcCCCCCceeEee
Q 047395          110 QVLDCLDRETGETVAIKVVRSI---------------------------KKYREAAMTEIDVLELLKRYDRSGSRCVQIR  162 (432)
Q Consensus       110 ~V~~a~~~~~~~~vaiK~~~~~---------------------------~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~  162 (432)
                      .||.|.. ..|..+|||+.+..                           ........+|.+.|..+....   -++.+.+
T Consensus         1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~G---v~vP~p~   76 (188)
T PF01163_consen    1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAG---VPVPKPY   76 (188)
T ss_dssp             EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT----SS--EE
T ss_pred             CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCC---ccCCcEE
Confidence            3898986 45789999997421                           011235667888888887633   2344554


Q ss_pred             cccccCCeEEEEEccCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH-HHhCCcEeccCCCCcEEeecCCccccC
Q 047395          163 NWFDYRNHICIVFEMLG--PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF-MHDLRLIHTDLKPENILFVSPEYLKIP  239 (432)
Q Consensus       163 ~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~-LH~~~ivHrDlkp~NIli~~~~~~k~~  239 (432)
                      .+.    .-+|||||++  |.....+....   ++.+....++.+++..+.. +|..||+|+||.+.|||+..       
T Consensus        77 ~~~----~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~-------  142 (188)
T PF01163_consen   77 DYN----RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDD-------  142 (188)
T ss_dssp             EEE----TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEET-------
T ss_pred             EEe----CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeec-------
Confidence            432    2369999996  64444444422   3355667788888886655 57999999999999999753       


Q ss_pred             CcccccCCCCCccccccCCCCCCeEEeecCCccccc
Q 047395          240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH  275 (432)
Q Consensus       240 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  275 (432)
                                           +.+.|+|||.+....
T Consensus       143 ---------------------~~~~iIDf~qav~~~  157 (188)
T PF01163_consen  143 ---------------------GKVYIIDFGQAVDSS  157 (188)
T ss_dssp             ---------------------TCEEE--GTTEEETT
T ss_pred             ---------------------ceEEEEecCcceecC
Confidence                                 269999999876543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.06  E-value=8.3e-09  Score=98.75  Aligned_cols=167  Identities=17%  Similarity=0.242  Sum_probs=122.3

Q ss_pred             cceEEEEEEecCCCcEEEEEEeechhhh-hHhHHHHHHHHHHHHhcCCCCCceeEeeccccc----CCeEEEEEccC--C
Q 047395          107 TFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY----RNHICIVFEML--G  179 (432)
Q Consensus       107 ~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~----~~~~~lv~e~~--~  179 (432)
                      .-.+.|+|....+|..|++|.+.-.+.. ......-++.++++.|     .|+|++.++|..    +..+++|++|.  .
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h-----~NvV~frevf~t~tF~D~SlvlvYDYyP~s  362 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCH-----TNVVPFREVFLTYTFGDLSLVLVYDYYPSS  362 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhcc-----CceeehhhhhhhhccCcceEEEEEecCCCC
Confidence            3457899999999999999998422211 1123345677888887     999999999873    35789999988  5


Q ss_pred             CCHHHHHHhcC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          180 PSLYDFLRKNN-------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       180 ~~L~~~l~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ++|.++.-...             ....+++.+|.++.||..||.++|+.|+.-+-|.|.+||++               
T Consensus       363 ~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~---------------  427 (655)
T KOG3741|consen  363 PTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVT---------------  427 (655)
T ss_pred             chHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEee---------------
Confidence            78888754221             13578899999999999999999999999999999999964               


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                  .+.+++|...|..........           |-+.+   -.+-|.=.||.+++.|.||..
T Consensus       428 ------------G~~RIriS~C~i~Dvl~~d~~-----------~~le~---~Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  428 ------------GKMRIRISGCGIMDVLQEDPT-----------EPLES---QQQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             ------------CcceEEEecccceeeecCCCC-----------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence                        344677776665444333221           11111   134588999999999999854

>PRK09902 hypothetical protein; Provisional

Probab=98.93  E-value=4.5e-08  Score=85.03  Aligned_cols=126  Identities=14%  Similarity=0.136  Sum_probs=93.7

Q ss_pred             ecccceEEEEEEecCCCcEEEEEEeec----h---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--CCeEEEE
Q 047395          104 GEGTFGQVLDCLDRETGETVAIKVVRS----I---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--RNHICIV  174 (432)
Q Consensus       104 g~G~~g~V~~a~~~~~~~~vaiK~~~~----~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--~~~~~lv  174 (432)
                      |+||.+-|+.....  |+.+-+|.-..    .   ......+.+|+..+..|......-|.++ +.+.-..  .-..+||
T Consensus        27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV  103 (216)
T PRK09902         27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV  103 (216)
T ss_pred             CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence            66888889987543  44688886531    1   2245678999999999998665545444 2221111  2357899


Q ss_pred             EccCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec
Q 047395          175 FEMLG--PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       175 ~e~~~--~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  232 (432)
                      +|-++  .+|.+++.+....+.+......++.+++..+.-||+.|+.|+|+-+.|||++.
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~  163 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKT  163 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecC
Confidence            99885  69999987754345678888899999999999999999999999999999753

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.83  E-value=4.8e-08  Score=86.40  Aligned_cols=113  Identities=25%  Similarity=0.292  Sum_probs=84.7

Q ss_pred             hHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-CCeEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Q 047395          135 REAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-RNHICIVFEML-G-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA  211 (432)
Q Consensus       135 ~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-~~~~~lv~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~  211 (432)
                      .....+|...+..|.....+-|..+-+...-.. ....++|+|++ + .+|.+++....  ..+......++.+++..+.
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~  132 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIA  132 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHH
Confidence            446788999999998865555544443322111 13568999999 4 47999998744  2677788899999999999


Q ss_pred             HHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCccc
Q 047395          212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY  273 (432)
Q Consensus       212 ~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  273 (432)
                      -||.+||+|+|+++.|||+..++                        ....+.++||+.+..
T Consensus       133 ~lH~~gi~H~Dl~~~NILv~~~~------------------------~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  133 KLHDAGIYHGDLNPSNILVDPDD------------------------GQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHCcCCCCCCCcccEEEeCCC------------------------CceeEEEEcchhcee
Confidence            99999999999999999986532                        345789999986543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.80  E-value=4.1e-08  Score=87.34  Aligned_cols=122  Identities=30%  Similarity=0.340  Sum_probs=86.2

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeec----------h-------------hhhhHhHHHHHHHHHHHHhcCC
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS----------I-------------KKYREAAMTEIDVLELLKRYDR  153 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~----------~-------------~~~~~~~~~E~~~l~~l~~~~~  153 (432)
                      +.+..+||-|--+.||.|.+. .|.++|||.=+-          .             ...+....+|.++|+.|.... 
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G-  170 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG-  170 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC-
Confidence            567789999999999999875 689999997421          0             112345778999999987521 


Q ss_pred             CCCceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec
Q 047395          154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       154 ~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  232 (432)
                        -.+...+++    +..++|||++ |..|...       +++.+....++..|++-+.-+-..||||+|+.+=||+++.
T Consensus       171 --~~VP~P~~~----nRHaVvMe~ieG~eL~~~-------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~  237 (304)
T COG0478         171 --VKVPKPIAW----NRHAVVMEYIEGVELYRL-------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTE  237 (304)
T ss_pred             --CCCCCcccc----ccceeeeehcccceeecc-------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEec
Confidence              123333332    5568999999 6555432       2345556667777777777666899999999999999654


Q ss_pred             C
Q 047395          233 P  233 (432)
Q Consensus       233 ~  233 (432)
                      +
T Consensus       238 d  238 (304)
T COG0478         238 D  238 (304)
T ss_pred             C
Confidence            3

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.71  E-value=2.6e-07  Score=81.45  Aligned_cols=136  Identities=20%  Similarity=0.194  Sum_probs=91.9

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhh-------------------------hhHhHHHHHHHHHHHHhcCCCC
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------------------------YREAAMTEIDVLELLKRYDRSG  155 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-------------------------~~~~~~~E~~~l~~l~~~~~~~  155 (432)
                      ..|++|--+.||+|.. .++..+|+|+++....                         ......+|...|.++....   
T Consensus        54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAG---  129 (268)
T COG1718          54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAG---  129 (268)
T ss_pred             eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcC---
Confidence            3666777778999974 5688999999863111                         1123456888888777632   


Q ss_pred             CceeEeecccccCCeEEEEEccCCCCH--HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeec
Q 047395          156 SRCVQIRNWFDYRNHICIVFEMLGPSL--YDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVS  232 (432)
Q Consensus       156 ~~iv~~~~~~~~~~~~~lv~e~~~~~L--~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~  232 (432)
                      -.+.+-+.+.    .-.|||||+|...  .-.|+.   .++...++..+..++++.+.-|-. .++||+||..=|||+. 
T Consensus       130 VrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-  201 (268)
T COG1718         130 VRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-  201 (268)
T ss_pred             CCCCCceeec----CCeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-
Confidence            2333333332    2369999995441  111111   124444788889999999998876 9999999999999964 


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCccccc
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH  275 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  275 (432)
                                                 .+.+.|+|+|.|....
T Consensus       202 ---------------------------~~~p~iID~~QaV~~~  217 (268)
T COG1718         202 ---------------------------DGEPYIIDVSQAVTID  217 (268)
T ss_pred             ---------------------------CCeEEEEECccccccC
Confidence                                       4578999999876544

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.68  E-value=4.6e-07  Score=79.08  Aligned_cols=129  Identities=17%  Similarity=0.253  Sum_probs=84.0

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhh----------HhHHHHHHHHHHHHhcCCCCCc---e
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----------EAAMTEIDVLELLKRYDRSGSR---C  158 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~----------~~~~~E~~~l~~l~~~~~~~~~---i  158 (432)
                      .+.++|++.+.+-......|.+..  .+|+.+++|..+......          +...+++..+..+.......++   +
T Consensus        28 i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl  105 (229)
T PF06176_consen   28 ILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL  105 (229)
T ss_pred             HHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence            356789999999888877777764  457899999876422111          2334555555555442222221   1


Q ss_pred             eEeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec
Q 047395          159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       159 v~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  232 (432)
                      +-..-.+......+++|||+ |..|.++..      +++    .+...|.+++.-||+.|++|+|..|.|+++..
T Consensus       106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~  170 (229)
T PF06176_consen  106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN  170 (229)
T ss_pred             eeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC
Confidence            21122223335667999999 878776532      333    24566778899999999999999999999753

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.67  E-value=9.2e-08  Score=94.84  Aligned_cols=131  Identities=18%  Similarity=0.207  Sum_probs=81.7

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh-----------------------------------h------hhHhHH
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-----------------------------------K------YREAAM  139 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----------------------------------~------~~~~~~  139 (432)
                      +.|+.++-|.||+|+... |+.||||+.+..-                                   .      ..-++.
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            589999999999999654 9999999974210                                   0      011345


Q ss_pred             HHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 047395          140 TEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL  218 (432)
Q Consensus       140 ~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  218 (432)
                      +|...+..++..-...+++.--.-+.+..+.-.|+|||+ |-.+.++..-.. ..++...+...+.++.  +.-+=..|+
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f--~~q~~~dgf  286 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAF--LRQLLRDGF  286 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCc
Confidence            566667777665444454432222334456678999999 878888743221 2355333332222221  233334899


Q ss_pred             EeccCCCCcEEeecCCc
Q 047395          219 IHTDLKPENILFVSPEY  235 (432)
Q Consensus       219 vHrDlkp~NIli~~~~~  235 (432)
                      .|.|..|.||++..+|.
T Consensus       287 fHaDpHpGNi~v~~~g~  303 (517)
T COG0661         287 FHADPHPGNILVRSDGR  303 (517)
T ss_pred             cccCCCccceEEecCCc
Confidence            99999999999765443

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.65  E-value=1.6e-07  Score=87.98  Aligned_cols=191  Identities=14%  Similarity=0.201  Sum_probs=117.7

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc-------ccCCe
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF-------DYRNH  170 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~-------~~~~~  170 (432)
                      ....||+|+-+.+|-.-.   -...+.|++..-. ....+...|      |.. ...+|-+..-+.|-       ..+..
T Consensus        15 ~gr~LgqGgea~ly~l~e---~~d~VAKIYh~Pppa~~aqk~a~------la~-~p~~p~~~~rvaWPqa~L~G~~~~~~   84 (637)
T COG4248          15 PGRPLGQGGEADLYTLGE---VRDQVAKIYHAPPPAAQAQKVAE------LAA-TPDAPLLNYRVAWPQATLHGGRRGKV   84 (637)
T ss_pred             CCccccCCccceeeecch---hhchhheeecCCCchHHHHHHHH------hcc-CCCCcchhhhhcccHHHhhCCCccce
Confidence            356799999999996532   2234567775321 111111111      111 01112111111111       11234


Q ss_pred             EEEEEccC-CC-CHHHHHHh----cCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          171 ICIVFEML-GP-SLYDFLRK----NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       171 ~~lv~e~~-~~-~L~~~l~~----~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      +.++|+.+ |. ....++..    +....+.+..+.+.++.|+.+.+.||+.|.+-+|+.++|+|+.+++.+.+.|-.  
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsD--  162 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSD--  162 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccc--
Confidence            78889988 43 44444432    222347789999999999999999999999999999999998766655543210  


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHh-----CCCCCccchHHHHHHHHHHHHhC-C
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSG-E  318 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvil~elltg-~  318 (432)
                                       ...|++-|      ......+|...|.+||.-.     +..-+...|.|.||+++|+|+.| .
T Consensus       163 -----------------sfqi~~ng------~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggr  219 (637)
T COG4248         163 -----------------SFQINANG------TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGR  219 (637)
T ss_pred             -----------------ceeeccCC------ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCC
Confidence                             01111111      1122346888999999865     33456789999999999999886 9


Q ss_pred             CCCCCC
Q 047395          319 ALFQTH  324 (432)
Q Consensus       319 ~pf~~~  324 (432)
                      .||.+.
T Consensus       220 HPysGI  225 (637)
T COG4248         220 HPYSGI  225 (637)
T ss_pred             CCCCcc
Confidence            999874

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.52  E-value=1.8e-08  Score=98.79  Aligned_cols=185  Identities=16%  Similarity=0.075  Sum_probs=131.5

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCc-eeEeecccccCCeEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICI  173 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~-iv~~~~~~~~~~~~~l  173 (432)
                      .-|...+.+++|+++++++.+...+...+ .+.+...    ....-++++|.++++     || .+..++-++.+...++
T Consensus       242 kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~n~-----P~~~v~~~~d~~~E~~~~i  311 (829)
T KOG0576|consen  242 KWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKVNN-----PNPVVRYLEDYDGEDYLWI  311 (829)
T ss_pred             cchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHccC-----CCCcccccccCCcccccch
Confidence            34566677899999999999876654444 6665432    334457778888877     77 6666777777889999


Q ss_pred             EEccC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          174 VFEML-GP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       174 v~e~~-~~-~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +++++ ++ +-...+.... ..+.+-+...+.+.-.++|++||+.-=+|+|    ||+..                    
T Consensus       312 ~~~i~s~~rs~~~~~~~se-~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s--------------------  366 (829)
T KOG0576|consen  312 PMRICSTGRSSALEMTVSE-IALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS--------------------  366 (829)
T ss_pred             hhhhhcCCccccccCChhh-HhhhhhhhhhhhhhhcccccccccccccCcc----ccccc--------------------
Confidence            99999 44 2222111100 1233444555667778899999988778998    88743                    


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                              ....+..||+........  .....+|+.++|||+.....+..+.|.||+|+-..++.-|.+|-.
T Consensus       367 --------~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  367 --------EEEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             --------ccccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence                    245677777766655444  556789999999999999999999999999987777777777654

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.44  E-value=7e-06  Score=71.50  Aligned_cols=123  Identities=20%  Similarity=0.309  Sum_probs=92.6

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh-----------------hhhHhHHHHHHHHHHHH-hcCCCCCceeEee
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-----------------KYREAAMTEIDVLELLK-RYDRSGSRCVQIR  162 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----------------~~~~~~~~E~~~l~~l~-~~~~~~~~iv~~~  162 (432)
                      ..||+|+.=.||.-  . .+....||+.+...                 .......+|+.....+. .......+|.+++
T Consensus         7 ~~i~~G~~R~cy~H--P-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    7 DLIAQGGERDCYQH--P-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             cccccCCCceEEEC--C-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            47899999999953  3 34557899986544                 23456778888888888 6666678899999


Q ss_pred             cccccCCeEEEEEccC-C------CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecC
Q 047395          163 NWFDYRNHICIVFEML-G------PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSP  233 (432)
Q Consensus       163 ~~~~~~~~~~lv~e~~-~------~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~  233 (432)
                      ++.+++.-..+|+|.+ +      .+|.+++....   ++. ....   .+-+-.+||-+++|+.+||+|.||++...
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~---~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~  154 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG---LTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRR  154 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC---ccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEec
Confidence            9999998889999965 2      47999996653   665 3333   33444568889999999999999998763

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.39  E-value=7.4e-06  Score=73.80  Aligned_cols=79  Identities=18%  Similarity=0.246  Sum_probs=57.0

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc---cccCCeEEEEEc
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW---FDYRNHICIVFE  176 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~---~~~~~~~~lv~e  176 (432)
                      ++.|+.|..+.||++....  ..+++|+.... .....+..|..++..+......   +.+++..   .......+++|+
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~p---vP~~~~~~~~~~~~~~~~~~~~   75 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIP---VPRVLAFDTSDEFNGFPYLLME   75 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSB---S--EEEEEEETEETSEEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCC---CceEEeecccccccccceEEEE
Confidence            5689999999999998654  58999997665 5566788999999999874332   3344442   233456899999


Q ss_pred             cC-CCCHHH
Q 047395          177 ML-GPSLYD  184 (432)
Q Consensus       177 ~~-~~~L~~  184 (432)
                      ++ |.++..
T Consensus        76 ~i~g~~~~~   84 (239)
T PF01636_consen   76 YIPGRPLDD   84 (239)
T ss_dssp             EESSEEHHH
T ss_pred             Eeccccccc
Confidence            99 766666

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.39  E-value=6.5e-06  Score=73.80  Aligned_cols=72  Identities=14%  Similarity=0.183  Sum_probs=51.8

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-C
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-G  179 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~  179 (432)
                      ..||.|..+.||+.    .+..+++|+..... ......+|.+++..+......   +.+.+.+.+..+...+|||++ |
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glp---vP~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIP---TPHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCC---CCceEEEEecCCeeeeeeeecCC
Confidence            57899999999984    25568899876422 334578899999999864333   344555556667788999999 5


Q ss_pred             C
Q 047395          180 P  180 (432)
Q Consensus       180 ~  180 (432)
                      .
T Consensus        79 ~   79 (226)
T TIGR02172        79 K   79 (226)
T ss_pred             c
Confidence            4

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.32  E-value=1.8e-05  Score=68.46  Aligned_cols=119  Identities=23%  Similarity=0.335  Sum_probs=84.6

Q ss_pred             CceEEEeeeecccc-eEEEEEEecCCCcEEEEEEeec------------hh----------hhhHhHHHHHHHHHHHHhc
Q 047395           95 SRYKILRKIGEGTF-GQVLDCLDRETGETVAIKVVRS------------IK----------KYREAAMTEIDVLELLKRY  151 (432)
Q Consensus        95 ~~y~i~~~lg~G~~-g~V~~a~~~~~~~~vaiK~~~~------------~~----------~~~~~~~~E~~~l~~l~~~  151 (432)
                      .+++.++.||.|.- |.||+++-  .|+.+|+|+++.            ..          ...+.+..|.+...+|+..
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            67999999999999 99999964  488999999421            00          1234577899998888885


Q ss_pred             CCCCCceeEeecccccC------------------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 047395          152 DRSGSRCVQIRNWFDYR------------------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM  213 (432)
Q Consensus       152 ~~~~~~iv~~~~~~~~~------------------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L  213 (432)
                      ...+---|+.++|..-.                  ....||.||....-          .++..    -+.+|.+-|..+
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~----~~~~~~~dl~~~  180 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIR----DIPQMLRDLKIL  180 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchh----HHHHHHHHHHHH
Confidence            54333348888876211                  13467777762211          12333    345677888899


Q ss_pred             HhCCcEeccCCCCcEE
Q 047395          214 HDLRLIHTDLKPENIL  229 (432)
Q Consensus       214 H~~~ivHrDlkp~NIl  229 (432)
                      |..||+-+|+++.|..
T Consensus       181 ~k~gI~~~Dv~~~ny~  196 (207)
T PF13095_consen  181 HKLGIVPRDVKPRNYR  196 (207)
T ss_pred             HHCCeeeccCcccccc
Confidence            9999999999999998

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.18  E-value=1.2e-05  Score=67.18  Aligned_cols=130  Identities=25%  Similarity=0.282  Sum_probs=89.0

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      -++.+.|++|++|.||++.+.  |..+|+|+-+. ...+..+..|.++|+.+.....    -.+++.+-    ..++.||
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~-ds~r~~l~kEakiLeil~g~~~----~p~vy~yg----~~~i~me   92 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWR--GGEVALKVRRR-DSPRRNLEKEAKILEILAGEGV----TPEVYFYG----EDFIRME   92 (201)
T ss_pred             hhhhhhhhcccccEEEEeecc--CceEEEEEecC-CcchhhHHHHHHHHHHhhhcCC----CceEEEec----hhhhhhh
Confidence            456678999999999999876  67999998654 4556778999999999986322    12344432    2345699


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCC-CC-cEEeecCCccccCCcccccCCCCCccc
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLK-PE-NILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk-p~-NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |+ |.+|.+.-..     .+    ++-+..++++---|-..||-|+.|. |. ||++                       
T Consensus        93 ~i~G~~L~~~~~~-----~~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv-----------------------  140 (201)
T COG2112          93 YIDGRPLGKLEIG-----GD----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLV-----------------------  140 (201)
T ss_pred             hhcCcchhhhhhc-----cc----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEe-----------------------
Confidence            99 7788766432     11    2234455666556677899999986 44 4443                       


Q ss_pred             cccCCCCCCeEEeecCCcccc
Q 047395          254 YKRLPKSSAIKVIDFGSTAYE  274 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~  274 (432)
                           .+..+.|+||..|+..
T Consensus       141 -----~~~~~~iIDFd~At~k  156 (201)
T COG2112         141 -----NDRDVYIIDFDSATFK  156 (201)
T ss_pred             -----cCCcEEEEEccchhhc
Confidence                 2337899999987643

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.16  E-value=1.7e-05  Score=83.55  Aligned_cols=200  Identities=21%  Similarity=0.312  Sum_probs=126.8

Q ss_pred             HHHHHHHHHHHHhcCCCCCceeEeecccccCC----eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Q 047395          138 AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN----HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF  212 (432)
Q Consensus       138 ~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~----~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~  212 (432)
                      ...|+..+..+.|     +|++.++.|--...    ...+..++| ..++...+....  .++.+.++.+..++++||.|
T Consensus       229 ~E~e~~~l~k~~~-----~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~--~i~~~~~r~~~~~~~~GL~~  301 (1351)
T KOG1035|consen  229 TEIELESLSKIAH-----DNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG--SIPLETLRILHQKLLEGLAY  301 (1351)
T ss_pred             HHHHHHHHHhhcc-----ccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc--ccCHHHHHHHHHHHhhhHHH
Confidence            3445556666666     78877776644322    223445678 778888887765  68999999999999999999


Q ss_pred             HHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEe--ecCCcccccCCccc--cccCCCcc
Q 047395          213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI--DFGSTAYEHQEHNY--IVSTRHYR  288 (432)
Q Consensus       213 LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~--Dfg~a~~~~~~~~~--~~gt~~y~  288 (432)
                      +|+..       ..|+.+.......                 ...+..+.+.++  ||+.+.........  ..-+..+.
T Consensus       302 ~h~~~-------l~~v~L~~s~~~~-----------------~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~  357 (1351)
T KOG1035|consen  302 LHSLS-------LEHVVLSASSSKE-----------------STVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRN  357 (1351)
T ss_pred             HHHhc-------cceeEEecccccc-----------------cccCccceeecchhhhcccccCCCcccchhhcCccccc
Confidence            99984       3444443221000                 002333444444  77766554433322  23355678


Q ss_pred             hhHHHhCCCCCcc--chHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCC
Q 047395          289 APEVILGLGWSYP--CDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEG  366 (432)
Q Consensus       289 aPE~~~~~~~~~~--sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  366 (432)
                      |||......+..+  .|+|.+|..+..+..|..+-....              .+..++.                    
T Consensus       358 ~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~--------------~~~~~l~--------------------  403 (1351)
T KOG1035|consen  358 ADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSA--------------VPVSLLD--------------------  403 (1351)
T ss_pred             cccccccccchhhhhhHHHHHHHHHhhhhhcCccccccc--------------chhhhhc--------------------
Confidence            8888777655544  699999999999888755322100              0000000                    


Q ss_pred             CCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          367 ATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                                           .   .......+++.+|+.-++++|+++.+++.|+|.+-
T Consensus       404 ---------------------~---~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~  439 (1351)
T KOG1035|consen  404 ---------------------V---LSTSELLDALPKCLDEDSEERLSALELLTHPFLRF  439 (1351)
T ss_pred             ---------------------c---ccchhhhhhhhhhcchhhhhccchhhhhhchhccc
Confidence                                 0   00013568999999999999999999999999864

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.11  E-value=3.6e-05  Score=70.02  Aligned_cols=76  Identities=12%  Similarity=0.093  Sum_probs=52.3

Q ss_pred             eeecccc-eEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-C
Q 047395          102 KIGEGTF-GQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-G  179 (432)
Q Consensus       102 ~lg~G~~-g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~  179 (432)
                      .|-.|.+ +.||++...  +..+.+|+.....  .....+|++++..+...    ..+.+++.+....+..++|||++ |
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~----~~vP~v~~~~~~~~~~~lv~e~i~G   76 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGK----LPVPEVIDYGSDDGRAWLLTSAVPG   76 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhc----CCCCeEEEEEecCCccEEEEEeeCC
Confidence            4555655 789998643  4688899875432  34577899999998763    23456666665556788999999 7


Q ss_pred             CCHHHH
Q 047395          180 PSLYDF  185 (432)
Q Consensus       180 ~~L~~~  185 (432)
                      .+|.+.
T Consensus        77 ~~l~~~   82 (244)
T cd05150          77 VPAAAL   82 (244)
T ss_pred             ccHhHh
Confidence            666543

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.10  E-value=2.4e-05  Score=77.72  Aligned_cols=146  Identities=18%  Similarity=0.179  Sum_probs=88.4

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechh--------------------------------hhhH------hHHHHH
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--------------------------------KYRE------AAMTEI  142 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--------------------------------~~~~------~~~~E~  142 (432)
                      +.||.-+.|.||+|+.+. |+.||||+-+..-                                ...+      ++.+|.
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            689999999999999765 9999999964210                                0011      234444


Q ss_pred             HHHHHHHhcCCCCC-----ceeEeecccccCCeEEEEEccC-CCCHH--HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 047395          143 DVLELLKRYDRSGS-----RCVQIRNWFDYRNHICIVFEML-GPSLY--DFLRKNNYRPFPVDLVREIGRQLLECVAFMH  214 (432)
Q Consensus       143 ~~l~~l~~~~~~~~-----~iv~~~~~~~~~~~~~lv~e~~-~~~L~--~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH  214 (432)
                      +..+..++.-..-.     .|.+++-  .....-.|+|||+ |..+.  +.|.+.+   ++...+..-+.+...  .-|=
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~--~~st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~l~~~~~--~qIf  318 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYW--DLSTKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNKLVEAYL--EQIF  318 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehh--hcCcceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHHHHHHHH--HHHH
Confidence            44444433111101     1233322  2234578999999 65443  4555554   676654443333322  2233


Q ss_pred             hCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC
Q 047395          215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE  277 (432)
Q Consensus       215 ~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~  277 (432)
                      ..|++|+|-.|.||++..++                       ..+..+.+-|||+.......
T Consensus       319 ~~GffHaDPHPGNilv~~~~-----------------------~~~~~ivllDhGl~~~is~~  358 (538)
T KOG1235|consen  319 KTGFFHADPHPGNILVRPNP-----------------------EGDEEIVLLDHGLYAVISHK  358 (538)
T ss_pred             hcCCccCCCCCCcEEEecCC-----------------------CCCccEEEEcccccccccHH
Confidence            56899999999999987432                       24677899999987655443

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.02  E-value=4.7e-05  Score=68.91  Aligned_cols=73  Identities=12%  Similarity=0.094  Sum_probs=45.3

Q ss_pred             eeeecccce-EEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhc-CCCCCceeEeeccccc---CCeEEEEE
Q 047395          101 RKIGEGTFG-QVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY-DRSGSRCVQIRNWFDY---RNHICIVF  175 (432)
Q Consensus       101 ~~lg~G~~g-~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~-~~~~~~iv~~~~~~~~---~~~~~lv~  175 (432)
                      +.|+.|+.. .||+.     +..+++|+.+. ......+.+|.+++..|... ....|.   ++...+.   ....+++|
T Consensus         3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~---~~~~~~~~~~~~~~~~l~   73 (235)
T cd05155           3 EPVDSGGTDNATFRL-----GDDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPE---PLGKGEPGEGYPWPWSVY   73 (235)
T ss_pred             eeccCCCcccceEEc-----CCceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCc---eeecCCCccCCCcceEEE
Confidence            567777776 58876     23577887654 22345788999999998753 223333   3332222   13458899


Q ss_pred             ccC-CCCH
Q 047395          176 EML-GPSL  182 (432)
Q Consensus       176 e~~-~~~L  182 (432)
                      +++ |.++
T Consensus        74 ~~i~G~~l   81 (235)
T cd05155          74 RWLEGETA   81 (235)
T ss_pred             EeecCCCC
Confidence            998 6554

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PLN02876 acyl-CoA dehydrogenase

Probab=97.92  E-value=0.00014  Score=77.94  Aligned_cols=79  Identities=15%  Similarity=0.139  Sum_probs=52.6

Q ss_pred             EeeeecccceEEEEEEecCCC--cEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC---CeEE
Q 047395          100 LRKIGEGTFGQVLDCLDRETG--ETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR---NHIC  172 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~--~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~---~~~~  172 (432)
                      ++.|+.|.++.+|+......+  ..+++|+.....  .....+.+|.++++.+...  .+..+.+++.++.+.   +..|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~--~~vpVP~v~~~~~d~~v~G~~f  120 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEH--TDVPVPKVYCLCTDASVIGTAF  120 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhc--CCCCCCcEEEEecCCCcCCCce
Confidence            567899999999998765432  467788754322  2234678999999999631  112345666665543   4678


Q ss_pred             EEEccC-CC
Q 047395          173 IVFEML-GP  180 (432)
Q Consensus       173 lv~e~~-~~  180 (432)
                      +|||++ |.
T Consensus       121 lVME~v~G~  129 (822)
T PLN02876        121 YIMEYLEGR  129 (822)
T ss_pred             EEEEecCCc
Confidence            999999 54

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.88  E-value=0.00021  Score=66.71  Aligned_cols=140  Identities=22%  Similarity=0.314  Sum_probs=99.1

Q ss_pred             EEEeeeecccceEEEEEEecCCCcEEEEEEeec---------------------------hhhhhHhHHHHHHHHHHHHh
Q 047395           98 KILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---------------------------IKKYREAAMTEIDVLELLKR  150 (432)
Q Consensus        98 ~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---------------------------~~~~~~~~~~E~~~l~~l~~  150 (432)
                      .|-.+|..|--+-||.|. ..+|..+|||+++.                           .+.....+..|++.|.++..
T Consensus       147 ~inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~  225 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN  225 (520)
T ss_pred             ecccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence            345678889999999997 45688899999752                           11223456778999999887


Q ss_pred             cCCCCCceeEeecccccCCeEEEEEccCCCCHH--HHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HhCCcEeccCCCCc
Q 047395          151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLY--DFLRKNNYRPFPVDLVREIGRQLLECVAFM-HDLRLIHTDLKPEN  227 (432)
Q Consensus       151 ~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~--~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~ivHrDlkp~N  227 (432)
                      ...+.|--+-+       ....|||+++|.+=+  -.|+.   ..++...+..+-.|++.-+.-| |.+++||.||.-=|
T Consensus       226 aGIP~PePIlL-------k~hVLVM~FlGrdgw~aPkLKd---~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN  295 (520)
T KOG2270|consen  226 AGIPCPEPILL-------KNHVLVMEFLGRDGWAAPKLKD---ASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFN  295 (520)
T ss_pred             cCCCCCCceee-------ecceEeeeeccCCCCcCccccc---ccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhh
Confidence            55444433322       224699999964322  22222   2578888888888988888877 46899999999999


Q ss_pred             EEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC
Q 047395          228 ILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ  276 (432)
Q Consensus       228 Ili~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~  276 (432)
                      +|+.                            .+.+.|+|-+.+.....
T Consensus       296 ~Lyh----------------------------dG~lyiIDVSQSVE~DH  316 (520)
T KOG2270|consen  296 LLYH----------------------------DGKLYIIDVSQSVEHDH  316 (520)
T ss_pred             heEE----------------------------CCEEEEEEccccccCCC
Confidence            9974                            46788999887655443

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.68  E-value=0.00058  Score=61.64  Aligned_cols=75  Identities=15%  Similarity=0.329  Sum_probs=48.0

Q ss_pred             EeeeecccceEEEEEEecC-CCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          100 LRKIGEGTFGQVLDCLDRE-TGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      ++.|..|-...+|++.... .++.|++|+............+|+.++..+.....    .++++.....    .+||||+
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl----~P~v~~~~~~----~~l~e~i   74 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGL----APKLYATFQN----GLIYEFI   74 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCC----CCeEEEEeCC----cEEEEee
Confidence            4677888888999986443 35689999876433222334578989998876332    2344433322    3799998


Q ss_pred             -CCCH
Q 047395          179 -GPSL  182 (432)
Q Consensus       179 -~~~L  182 (432)
                       |.++
T Consensus        75 ~G~~l   79 (235)
T cd05157          75 PGRTL   79 (235)
T ss_pred             CCCcC
Confidence             6554

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.64  E-value=0.0016  Score=63.16  Aligned_cols=75  Identities=23%  Similarity=0.317  Sum_probs=51.9

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeech--------hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--------KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--------~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+.||.|.+..||++.....++.|+||.-...        ....+....|.+.|..+....  ...+++++.+.  ....
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~--p~~VPkV~~~D--~~~~  106 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYV--PDLVPKVYHYD--EELA  106 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhC--CCCCCeEEEEC--CCCC
Confidence            46899999999999998644468999974311        123456677888888876532  23466666653  3557


Q ss_pred             EEEEccC
Q 047395          172 CIVFEML  178 (432)
Q Consensus       172 ~lv~e~~  178 (432)
                      ++|||++
T Consensus       107 ~lVME~L  113 (401)
T PRK09550        107 VTVMEDL  113 (401)
T ss_pred             EEEEecC
Confidence            8999998

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.54  E-value=0.00075  Score=63.30  Aligned_cols=78  Identities=13%  Similarity=0.095  Sum_probs=49.4

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeec---ccccCCeEEEEEc
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRN---WFDYRNHICIVFE  176 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~---~~~~~~~~~lv~e  176 (432)
                      ++.|..|....+|+...  .+..+++|+...  ...+....|+.++..|.......|.++...+   +....+..++|++
T Consensus        19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEe--CCCcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            56777888889998853  345789998764  3345677899999988764322232222111   1123456789999


Q ss_pred             cC-CCC
Q 047395          177 ML-GPS  181 (432)
Q Consensus       177 ~~-~~~  181 (432)
                      ++ |..
T Consensus        95 ~i~G~~  100 (296)
T cd05153          95 FLAGEH  100 (296)
T ss_pred             eCCCCC
Confidence            99 544

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.48  E-value=0.0011  Score=62.45  Aligned_cols=75  Identities=17%  Similarity=0.176  Sum_probs=47.7

Q ss_pred             EeeeecccceEEEEEEecC------CCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395          100 LRKIGEGTFGQVLDCLDRE------TGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      ++.|..|-...||++....      +++.+++|+............+|..++..+..... .|   +++..+..    .+
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~-~P---~~~~~~~~----~~   74 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNL-GP---KLYGIFPN----GR   74 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCC-CC---ceEEEeCC----Cc
Confidence            3556667777899886533      25789999976543333556789999999887432 23   34444332    25


Q ss_pred             EEccC-CCCH
Q 047395          174 VFEML-GPSL  182 (432)
Q Consensus       174 v~e~~-~~~L  182 (432)
                      |+||+ |.++
T Consensus        75 v~e~i~G~~l   84 (302)
T cd05156          75 IEEFIPSRTL   84 (302)
T ss_pred             hhheeCCCcC
Confidence            78887 5544

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.47  E-value=0.00064  Score=66.20  Aligned_cols=90  Identities=23%  Similarity=0.237  Sum_probs=61.4

Q ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcC
Q 047395          300 YPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL  379 (432)
Q Consensus       300 ~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (432)
                      +|+||||+|.++.++.-|...+......+....+.+..- .+.+......+.                            
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~-~d~~~~~~a~e~----------------------------  160 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYT-DDQELLSTAMEH----------------------------  160 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcc-CchhHHHHHHHH----------------------------
Confidence            499999999999999999888877666666655544322 222111110000                            


Q ss_pred             chhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       380 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                              ...-.++..+.+++.+|+-..|..||...++.+++-|..
T Consensus       161 --------~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~e  199 (725)
T KOG1093|consen  161 --------LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTE  199 (725)
T ss_pred             --------HHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHH
Confidence                    011133444789999999999999999999999987754

>PRK05231 homoserine kinase; Provisional

Probab=97.43  E-value=0.0023  Score=60.70  Aligned_cols=77  Identities=13%  Similarity=0.075  Sum_probs=46.6

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeec---ccccCCeEEEEEc
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRN---WFDYRNHICIVFE  176 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~---~~~~~~~~~lv~e  176 (432)
                      .+.|+.|....+|+....  +..+++|++..  ...+....|+.++..|.......|.++...+   +....+..++++|
T Consensus        27 ~~~l~~G~~n~~y~v~t~--~g~~vLK~~~~--~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~  102 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTT--QGEYVLTLFER--LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT  102 (319)
T ss_pred             cchhccccccceEEEEeC--CCcEEEEEecc--CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence            356777877899988643  33689998752  2234455677788888764333344332111   1123456789999


Q ss_pred             cC-CC
Q 047395          177 ML-GP  180 (432)
Q Consensus       177 ~~-~~  180 (432)
                      ++ |.
T Consensus       103 ~l~G~  107 (319)
T PRK05231        103 FLEGK  107 (319)
T ss_pred             ecCCC
Confidence            98 54

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.36  E-value=0.00089  Score=61.36  Aligned_cols=71  Identities=13%  Similarity=0.129  Sum_probs=44.2

Q ss_pred             eeecccceEEEEEEecCCCcEEEEEEeechhhhh-HhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-C
Q 047395          102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-G  179 (432)
Q Consensus       102 ~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~  179 (432)
                      .+..|-.+.+|+..  .+++.+++|+........ -...+|..+++.+..... .|.++   ....    -++||||+ |
T Consensus         3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~-~P~~i---~~~~----~~~v~e~i~G   72 (256)
T TIGR02721         3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGL-APKPI---LVNE----HWLLVEWLEG   72 (256)
T ss_pred             cCCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCC-CCceE---EEeC----CEEEEEeccC
Confidence            34567778899886  446788899764332221 235789999999986432 24433   2222    26899998 6


Q ss_pred             CCH
Q 047395          180 PSL  182 (432)
Q Consensus       180 ~~L  182 (432)
                      ..+
T Consensus        73 ~~~   75 (256)
T TIGR02721        73 EVI   75 (256)
T ss_pred             ccc
Confidence            443

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.36  E-value=0.0025  Score=60.13  Aligned_cols=79  Identities=14%  Similarity=0.045  Sum_probs=47.3

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeec---ccccCCeEEEEE
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRN---WFDYRNHICIVF  175 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~---~~~~~~~~~lv~  175 (432)
                      .++.++.|....+|++.. . +..+++|+..... ..+....|.+++..|.......|.++...+   +....+..++++
T Consensus        26 ~i~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~  102 (307)
T TIGR00938        26 SLKGIAEGVENSNYLLTT-D-VGRYILTLYEKRV-KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV  102 (307)
T ss_pred             eccccCCccccceEEEEe-C-CCcEEEEEecCCC-CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence            356777887789998863 3 3467889875421 234456778888888653332233332211   112246678999


Q ss_pred             ccC-CC
Q 047395          176 EML-GP  180 (432)
Q Consensus       176 e~~-~~  180 (432)
                      ||+ |.
T Consensus       103 e~i~G~  108 (307)
T TIGR00938       103 EFLQGL  108 (307)
T ss_pred             EeCCCC
Confidence            998 53

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=97.27  E-value=0.00017  Score=78.13  Aligned_cols=140  Identities=11%  Similarity=-0.020  Sum_probs=97.2

Q ss_pred             CceeEeecccc--cCCeEEEEEccC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC-----CcEeccCCC
Q 047395          156 SRCVQIRNWFD--YRNHICIVFEML-GPSLYDFLRKNNY--RPFPVDLVREIGRQLLECVAFMHDL-----RLIHTDLKP  225 (432)
Q Consensus       156 ~~iv~~~~~~~--~~~~~~lv~e~~-~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-----~ivHrDlkp  225 (432)
                      +++.....-..  .....+.+++|+ +|.+.+.|.+.-.  ..+...-+.....+.+.+..-+|+.     -.+|+++|+
T Consensus      1289 ~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf 1368 (2724)
T KOG1826|consen 1289 YLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKF 1368 (2724)
T ss_pred             eeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhh
Confidence            55554433332  234568899999 9999999976432  2344445555555557777777753     278999999


Q ss_pred             CcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccc
Q 047395          226 ENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPC  302 (432)
Q Consensus       226 ~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~s  302 (432)
                      -|.+|..+..                           +++.++|+.+.....   ....++++.|++|++.....++.++
T Consensus      1369 ~lpmIVtny~---------------------------v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rs 1421 (2724)
T KOG1826|consen 1369 TLPMIVTNYN---------------------------VKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRS 1421 (2724)
T ss_pred             hccceecCCc---------------------------ccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHH
Confidence            9999766554                           445555554422111   1234678899999999998899889


Q ss_pred             hHHHHHHHHHHHHhCCCCCC
Q 047395          303 DMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       303 DiwSlGvil~elltg~~pf~  322 (432)
                      |+|..|+-+|++..|..+|.
T Consensus      1422 dilr~s~~ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1422 DILRRSLSLYLRSDGNAYFI 1441 (2724)
T ss_pred             HHHHHHHHHHHHhcccHHHH
Confidence            99999999999988887773

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.25  E-value=0.00057  Score=62.88  Aligned_cols=130  Identities=21%  Similarity=0.266  Sum_probs=85.4

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeec-------hh----------------hhhHhHHHHHHHHHHHHhcC
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS-------IK----------------KYREAAMTEIDVLELLKRYD  152 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~-------~~----------------~~~~~~~~E~~~l~~l~~~~  152 (432)
                      -+.+++.||-|--+.||.+-+. .|++.++|+-+.       .+                ..+-...+|...++.|....
T Consensus        93 v~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g  171 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG  171 (465)
T ss_pred             hhhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence            3778899999999999999864 588899996321       00                01224567888888887632


Q ss_pred             CCCCceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEee
Q 047395          153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFV  231 (432)
Q Consensus       153 ~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  231 (432)
                      -+.|   +.+    +.+..|+|||++ |-.|.+.-+-     .+   +..+...+..-+.-|-.+|+||+|..-=||++.
T Consensus       172 fpVP---kpi----D~~RH~Vvmelv~g~Pl~~v~~v-----~d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~  236 (465)
T KOG2268|consen  172 FPVP---KPI----DHNRHCVVMELVDGYPLRQVRHV-----ED---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVK  236 (465)
T ss_pred             CCCC---Ccc----cccceeeHHHhhcccceeeeeec-----CC---hHHHHHHHHHHHHHHHHcCceecccchheeEEe
Confidence            2222   222    235678999999 7787655322     12   233445555556678889999999999999976


Q ss_pred             cCCccccCCc
Q 047395          232 SPEYLKIPDY  241 (432)
Q Consensus       232 ~~~~~k~~df  241 (432)
                      +++.+++.||
T Consensus       237 dd~~i~vIDF  246 (465)
T KOG2268|consen  237 DDDKIVVIDF  246 (465)
T ss_pred             cCCCEEEeec
Confidence            5443333333

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.12  E-value=0.007  Score=57.49  Aligned_cols=83  Identities=17%  Similarity=0.108  Sum_probs=51.6

Q ss_pred             eeecccceEEEEEEecCCCcEEEEEEeech--------hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395          102 KIGEGTFGQVLDCLDRETGETVAIKVVRSI--------KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus       102 ~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--------~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .||.|....||++.+...++.|+||.-...        ....++...|...|........  ..+.+++.+  +.....+
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P--~~vP~vy~~--D~e~~~~   77 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVP--HLVPRIFHF--DTEMAVT   77 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCc--cccCeEEEE--cccccee
Confidence            579999999999997544468999974211        1223455678888877655322  245555543  3345568


Q ss_pred             EEccC--CCCHHHHHHh
Q 047395          174 VFEML--GPSLYDFLRK  188 (432)
Q Consensus       174 v~e~~--~~~L~~~l~~  188 (432)
                      |||++  ...|.+.|.+
T Consensus        78 vMEdL~~~~ilR~~Li~   94 (370)
T TIGR01767        78 VMEDLSHHKIARKGLIE   94 (370)
T ss_pred             hHhhCccchHHHHHHHc
Confidence            99988  3345555543

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PLN02236 choline kinase

Probab=97.01  E-value=0.0074  Score=57.83  Aligned_cols=75  Identities=15%  Similarity=0.134  Sum_probs=46.2

Q ss_pred             EeeeecccceEEEEEEecC----CCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395          100 LRKIGEGTFGQVLDCLDRE----TGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~----~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      +..|-.|-...+|++....    .++.|++|+........-...+|..+++.+...... |   ++++.+..+    .|+
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~-P---~~~~~~~~g----~v~  112 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQG-P---RLLGRFPNG----RVE  112 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCC-C---ceEEEECCc----eEE
Confidence            3456558888999986432    346899998765333222346799999998874332 3   334444332    467


Q ss_pred             ccC-CCCH
Q 047395          176 EML-GPSL  182 (432)
Q Consensus       176 e~~-~~~L  182 (432)
                      +|+ +.+|
T Consensus       113 efi~g~~l  120 (344)
T PLN02236        113 EFIHARTL  120 (344)
T ss_pred             EeeCCCCC
Confidence            877 5444

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.94  E-value=0.002  Score=55.87  Aligned_cols=92  Identities=25%  Similarity=0.242  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccCC-CCHHHH---HHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 047395          140 TEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDF---LRKNNYRPFPVDLVREIGRQLLECVAFMHD  215 (432)
Q Consensus       140 ~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~---l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  215 (432)
                      .|.-+++.+.+.    +++++++|++..    ++|.||.+ +++...   +.+.  ..-++..+..|+.++++.+.+|+.
T Consensus         8 ~E~lll~~l~~~----~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~--~~~~w~~R~~iA~~lL~~l~~l~~   77 (188)
T PF12260_consen    8 NEPLLLQLLQGS----EPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQF--LQSPWEQRAKIALQLLELLEELDH   77 (188)
T ss_pred             cHHHHHHHcCCC----CCCCCeeeECCC----EEEEEeecCccccccccccccc--cccCHHHHHHHHHHHHHHHHHHhc
Confidence            467777777652    478899998842    56889884 555321   1111  136899999999999999999997


Q ss_pred             ---CCcEeccCCCCcEEeecCCccccCCc
Q 047395          216 ---LRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       216 ---~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                         ..+.-.|++|+|+-++++|.+|+.|.
T Consensus        78 ~~~~~~~lcDv~~~nfgv~~~~~lk~iDl  106 (188)
T PF12260_consen   78 GPLGFFYLCDVSPDNFGVNDDGRLKLIDL  106 (188)
T ss_pred             CCCCcEEEeecchHHeEEeCCCcEEEEec
Confidence               45778999999999776554444443

Proteins in this uncharacterised family are described as transmembrane proteins.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.93  E-value=0.013  Score=55.79  Aligned_cols=75  Identities=13%  Similarity=0.251  Sum_probs=44.7

Q ss_pred             EeeeecccceEEEEEEecCC---CcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEc
Q 047395          100 LRKIGEGTFGQVLDCLDRET---GETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE  176 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~---~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e  176 (432)
                      ++.|..|-...+|++.....   +..|++|+........-...+|..+++.+...... |   +++.++.. +   +|.+
T Consensus        19 i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~-P---~~l~~~~~-G---~i~~   90 (330)
T PLN02421         19 VERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFG-A---KLLGVFGN-G---MIQS   90 (330)
T ss_pred             EEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCC-C---ceeEEeCC-c---Eeeh
Confidence            34455577778998864432   34789998754333233346789999999874332 3   34444432 2   4777


Q ss_pred             cC-CCCH
Q 047395          177 ML-GPSL  182 (432)
Q Consensus       177 ~~-~~~L  182 (432)
                      |+ |.+|
T Consensus        91 fi~g~~l   97 (330)
T PLN02421         91 FINARTL   97 (330)
T ss_pred             hhcCCCC
Confidence            77 5443

>PRK10593 hypothetical protein; Provisional

Probab=96.81  E-value=0.011  Score=55.46  Aligned_cols=107  Identities=17%  Similarity=0.117  Sum_probs=73.6

Q ss_pred             EEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc---cCCeEEEE
Q 047395           98 KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD---YRNHICIV  174 (432)
Q Consensus        98 ~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~---~~~~~~lv  174 (432)
                      .-.+.||.|..+.||+....  +..+.+|..+. ......+..|...|+.|....  ...+.++++++.   ..+..+||
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~--~~~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~--~vpVP~V~~~~~~~~~~g~~~LV   91 (297)
T PRK10593         17 SRVECISEQPYAALWALYDS--QGNPMPLMARS-FSTPGVAQQEAWKLSMLARSG--TVRMPTVYGVMTHEQSPGPDVLL   91 (297)
T ss_pred             heeeecCCccceeEEEEEcC--CCCEEEEEecc-cccchHHHHHHHHHHHHccCC--CCCcCcEEEEeccCCcCCCeEEE
Confidence            34578999999999998543  23477787533 223457889999999997632  124555665543   34678999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL  216 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  216 (432)
                      ||++ |.++.+.       ..+......+..+++.+|.-||+.
T Consensus        92 mE~i~G~~~~~~-------~~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         92 LERLRGVSVEAP-------ARTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             EeccCCEecCCC-------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence            9999 7776641       133445667778889999999985

>PRK12396 5-methylribose kinase; Reviewed

Probab=96.74  E-value=0.016  Score=55.85  Aligned_cols=84  Identities=23%  Similarity=0.246  Sum_probs=54.0

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeec----h---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRS----I---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~----~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++.||.|.-..||++.+...++.|+||.-..    .   ....++...|.++|+.+.....  ..+.+++.+  +.....
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P--~~VP~vy~~--D~e~~~  109 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAP--GLVPKVYLF--DSVMNC  109 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCC--CcCCeEEEE--CcHHhh
Confidence            6789999999999998754456799997421    1   1234566778888888766432  235555543  334456


Q ss_pred             EEEccC--CCCHHHHHH
Q 047395          173 IVFEML--GPSLYDFLR  187 (432)
Q Consensus       173 lv~e~~--~~~L~~~l~  187 (432)
                      +|||++  ...|.+.|.
T Consensus       110 ~vMEdL~~~~ilR~~Li  126 (409)
T PRK12396        110 CVMEDLSDHTILRTALI  126 (409)
T ss_pred             HHHHhCcccHHHHHHHH
Confidence            788887  233454443

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.53  E-value=0.023  Score=52.66  Aligned_cols=45  Identities=24%  Similarity=0.237  Sum_probs=29.9

Q ss_pred             ecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHh
Q 047395          104 GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR  150 (432)
Q Consensus       104 g~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~  150 (432)
                      ++|-...|+.+. ...|+.+++|.-+.. .......+|.+++..|..
T Consensus        20 ~~g~~~~v~~i~-~~~g~~~VlR~p~~~-~~~~~l~rE~~vL~~L~~   64 (276)
T cd05152          20 ESGLDFQVVFAK-DTDGVPWVLRIPRRP-DVSERAAAEKRVLALVRK   64 (276)
T ss_pred             CCcceeEEEEEE-cCCCCeEEEEecCCH-HHHHHHHHHHHHHHHHHh
Confidence            445445666553 234778899976532 234567899999999975

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PRK11768 serine/threonine protein kinase; Provisional

Probab=96.53  E-value=0.088  Score=50.04  Aligned_cols=71  Identities=14%  Similarity=0.051  Sum_probs=42.4

Q ss_pred             cceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeec--ccccCCeEEEEEccC
Q 047395          107 TFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRN--WFDYRNHICIVFEML  178 (432)
Q Consensus       107 ~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~--~~~~~~~~~lv~e~~  178 (432)
                      .-..||+... .++..+++|+.+........+..|+..+..|.......+..+..-+  +...++..+.|++++
T Consensus        37 ~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~  109 (325)
T PRK11768         37 YENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRR  109 (325)
T ss_pred             ccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeee
Confidence            3457888763 4467899998864444456677899998888763321111111111  122245678889888

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.47  E-value=0.063  Score=52.08  Aligned_cols=82  Identities=17%  Similarity=0.135  Sum_probs=51.6

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeec-----hh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRS-----IK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~-----~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ..+.||.|....||+..+.  +..++||.-..     ..   ...+....|...|+.+....  ..++.+++.+.+  +.
T Consensus        36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~--p~~VPkVy~~de--d~  109 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLC--PDHVPEVYHFDR--TM  109 (418)
T ss_pred             eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcC--CCCCCeEEEECC--CC
Confidence            3678899999999998763  45689997531     11   12334455666666654321  135667777766  44


Q ss_pred             EEEEEccC-C--CCHHHHH
Q 047395          171 ICIVFEML-G--PSLYDFL  186 (432)
Q Consensus       171 ~~lv~e~~-~--~~L~~~l  186 (432)
                      .+++||++ +  ..+.+.+
T Consensus       110 ~vlvME~L~~~~~ilr~~L  128 (418)
T PLN02756        110 ALIGMRYLEPPHIILRKGL  128 (418)
T ss_pred             CEEEEeecCCcceehhhhh
Confidence            67889999 4  2455444

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.12  E-value=0.051  Score=50.94  Aligned_cols=75  Identities=16%  Similarity=0.125  Sum_probs=42.7

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeec---hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC--eEEE
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN--HICI  173 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~--~~~l  173 (432)
                      +++.+..|....+|...+.  ++.+++. ...   .........+|..+++.+.....   -+...++.+..+.  ..|.
T Consensus        29 ~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~v---P~p~~~~~~~~~~~g~pf~  102 (321)
T COG3173          29 IVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDV---PVPRAFGLCGEGYLGTPFY  102 (321)
T ss_pred             eeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCC---CCcccccccccCCCCCceE
Confidence            4445544444456665444  7778888 321   12334456678888777765322   2334455554443  6789


Q ss_pred             EEccC-C
Q 047395          174 VFEML-G  179 (432)
Q Consensus       174 v~e~~-~  179 (432)
                      ||+++ |
T Consensus       103 v~~~veG  109 (321)
T COG3173         103 VMEWVEG  109 (321)
T ss_pred             EEEEecc
Confidence            99998 5

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=96.10  E-value=0.015  Score=51.50  Aligned_cols=51  Identities=18%  Similarity=0.149  Sum_probs=30.9

Q ss_pred             CcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395          120 GETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus       120 ~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      ++.|+||+........-....|..+++.+......    .++++.+..+    .|.+|+
T Consensus         2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g~~----p~~~~~~~~g----~v~e~i   52 (211)
T PF01633_consen    2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAGLG----PKIIYFFENG----RVEEFI   52 (211)
T ss_dssp             TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTTSS----S-EEEEETTE----EEEE--
T ss_pred             CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcCCC----CeEEEEcCCC----cEEEEe
Confidence            46789999876655555667899999988874322    3444444332    455776

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=96.09  E-value=0.14  Score=48.34  Aligned_cols=66  Identities=12%  Similarity=0.250  Sum_probs=37.8

Q ss_pred             EEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeec---ccccCCeEEEEEccC-CC
Q 047395          110 QVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRN---WFDYRNHICIVFEML-GP  180 (432)
Q Consensus       110 ~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~---~~~~~~~~~lv~e~~-~~  180 (432)
                      .||++.. . +..+++|++...   ......|..++..|......-|.++...+   +...++..++|+|++ |.
T Consensus        11 ~v~~v~t-~-~g~~~LK~~~~~---~~~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~   80 (313)
T TIGR02906        11 NVYKVET-D-SGNKCLKKINYP---PERLLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYVLTEWIEGR   80 (313)
T ss_pred             cEEEEEe-C-CCCeEEEEcCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEehhccCc
Confidence            4888763 2 336889987532   23455677777777664332233333211   012356789999999 53

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PTZ00384 choline kinase; Provisional

Probab=95.89  E-value=0.24  Score=48.15  Aligned_cols=75  Identities=17%  Similarity=0.222  Sum_probs=42.9

Q ss_pred             EeeeecccceEEEEEEecCCC-c-----EEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395          100 LRKIGEGTFGQVLDCLDRETG-E-----TVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~-~-----~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      ++.|..|-...+|++...... .     .|.+++........-.-.+|+.+++.+....    .-.++++.+..    ++
T Consensus        55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~g----lgP~l~~~f~~----g~  126 (383)
T PTZ00384         55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNN----FGPKIIGRFGD----FT  126 (383)
T ss_pred             EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCC----CCCeEEEecCC----EE
Confidence            445656888899998644321 2     2444443222222223456899999987732    22355555543    58


Q ss_pred             EEccC-CCCH
Q 047395          174 VFEML-GPSL  182 (432)
Q Consensus       174 v~e~~-~~~L  182 (432)
                      |.||+ |.+|
T Consensus       127 l~efIeGr~l  136 (383)
T PTZ00384        127 IQEWVEGNTM  136 (383)
T ss_pred             EEEEeccccC
Confidence            88888 5544

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.81  E-value=0.039  Score=52.73  Aligned_cols=61  Identities=23%  Similarity=0.358  Sum_probs=45.7

Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HhCCcEeccCCCCcEEeecCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM-HDLRLIHTDLKPENILFVSPE  234 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~ivHrDlkp~NIli~~~~  234 (432)
                      ..++-+|. |-++..+++...   .+++..+.++.-.+.||--+ --.+.+|.|+.|.||++.-+.
T Consensus       320 ~vl~E~~~~Gl~v~~~v~~~~---~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~  382 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVKWKS---QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK  382 (565)
T ss_pred             ceeeeeccccccHHhhhhccc---ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence            45666688 889999998764   66667777776666665544 356899999999999986543

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=95.51  E-value=0.058  Score=47.31  Aligned_cols=109  Identities=17%  Similarity=0.188  Sum_probs=63.0

Q ss_pred             ccceEEEEEEecCCCcEEEEEEeechhh--hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-CCCH
Q 047395          106 GTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSL  182 (432)
Q Consensus       106 G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L  182 (432)
                      ++.++.-.+.... | +..+|.+....-  ....+..+.+++.++       ..|+++..-  ..-.+.++.|.| ....
T Consensus        73 ~gNsTl~~~kt~i-G-~L~lKKi~slp~~~~~~~y~nky~v~Arm-------hGilrL~ND--n~~~yGvIlE~Cy~~~i  141 (308)
T PF07387_consen   73 NGNSTLLIGKTKI-G-PLFLKKIRSLPCCINDALYFNKYRVFARM-------HGILRLKND--NNYKYGVILERCYKIKI  141 (308)
T ss_pred             CCceEEEEecccc-c-hhhhhhccCCCcccchhhhhhhhhHHHHh-------hheeEeecC--CCceeEEEEeeccCccc
Confidence            4444444443332 3 345665553221  234456778888777       347887732  445678999988 3211


Q ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh--CCcEeccCCCCcEEeecCCccccCC
Q 047395          183 YDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD--LRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       183 ~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                                 ..   .-.+. -=+.+|.-.|+  .+.+|+|..|+|||-+..|.+|+.|
T Consensus       142 -----------~~---~N~i~-agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVD  186 (308)
T PF07387_consen  142 -----------NF---SNFIT-AGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVD  186 (308)
T ss_pred             -----------ch---hHHHH-HhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecC
Confidence                       11   11111 11467788884  5799999999999966555544433

The function of this family is unknown.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.44  E-value=0.24  Score=46.05  Aligned_cols=74  Identities=18%  Similarity=0.288  Sum_probs=50.1

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      -.+.++-|....+|+..  .+++.+.||+-.  ......+..|..-|+.|...  ..-.+.+++.+....+..+|||||+
T Consensus        21 ~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~--~~~~vP~vi~~G~~~~~~fLlle~l   94 (288)
T PF03881_consen   21 SIEPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEA--NPIRVPKVIAWGEYDDDAFLLLEFL   94 (288)
T ss_dssp             EEEEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHT--TTSBS--EEEEEE-SSCCEEEEE--
T ss_pred             eeEecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhc--CCCCCCeEEEEEeecCCceEEEEee
Confidence            45678889999999886  667889999865  44456788899999999542  2245677777776666679999998

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=95.39  E-value=0.068  Score=50.43  Aligned_cols=105  Identities=14%  Similarity=0.220  Sum_probs=67.7

Q ss_pred             cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 ~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      ...+.|++|++-|++|.-.-      .-..+++..++.+.+.-++-+..+ ..=|||+.-.||||+              
T Consensus       297 e~~y~yl~~kdhgt~is~ik------~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId--------------  356 (488)
T COG5072         297 ETLYLYLHFKDHGTPISIIK------ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID--------------  356 (488)
T ss_pred             CceEEEEEEecCCceeeeee------cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee--------------
Confidence            34578899999988875321      245778888998888877777644 688999999999964              


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHH
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVG  308 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG  308 (432)
                                    .++|.|+||-+++......  .+.....--|-.+.|.. +..-|||-+-
T Consensus       357 --------------~GnvtLIDfklsRl~~~q~--~isy~rldhp~lF~G~d-d~QFeIYrlM  402 (488)
T COG5072         357 --------------EGNVTLIDFKLSRLSYSQG--IISYNRLDHPDLFNGVD-DYQFEIYRLM  402 (488)
T ss_pred             --------------cCceEEEEeeeeecccCCc--eeeccccCchhhhcCcc-ceeeeHHHHH
Confidence                          5667888887776322111  11112233444555433 5566666553

>PHA03111 Ser/Thr kinase; Provisional

Probab=95.23  E-value=0.025  Score=52.41  Aligned_cols=70  Identities=20%  Similarity=0.206  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHHHHHHHHHH----hCCcEeccCCCCcEEeecCCcc---ccCCcccccCCCCCccccccCCCCCCeEEeec
Q 047395          196 VDLVREIGRQLLECVAFMH----DLRLIHTDLKPENILFVSPEYL---KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF  268 (432)
Q Consensus       196 ~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIli~~~~~~---k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Df  268 (432)
                      .+-++.++.||+.-.-.+-    ..+.+|-||||+||||.+....   +.++-...            .......+|.||
T Consensus       278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~v------------F~Epi~~~LnDF  345 (444)
T PHA03111        278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLKDATYV------------FNEPIKACLNDF  345 (444)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEECCeEEE------------eccchhhhhccc
Confidence            4567788888876553342    3479999999999999765322   22221111            234556788899


Q ss_pred             CCcccccCC
Q 047395          269 GSTAYEHQE  277 (432)
Q Consensus       269 g~a~~~~~~  277 (432)
                      .++...+-.
T Consensus       346 DfSqv~~i~  354 (444)
T PHA03111        346 DFSQVANII  354 (444)
T ss_pred             CHHHHccch
Confidence            887665443

>PRK06148 hypothetical protein; Provisional

Probab=95.00  E-value=0.35  Score=53.29  Aligned_cols=81  Identities=15%  Similarity=0.156  Sum_probs=45.6

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhc--CCCCCceeEeec-----cccc-CC--e
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRSGSRCVQIRN-----WFDY-RN--H  170 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~--~~~~~~iv~~~~-----~~~~-~~--~  170 (432)
                      +.|+ |..-.+|+... .+|+.+++|+.+... .......|...+..|...  ....|.++...+     .... .+  +
T Consensus        31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~~-~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~  107 (1013)
T PRK06148         31 TPLD-GERDLNFRLTT-DDGADYILKIVNPSE-PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR  107 (1013)
T ss_pred             eecC-CcCCceEEEEe-CCCCeEEEEEcCCcc-chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence            4564 34567788753 457789999987532 233445566677766553  222344443221     1111 12  5


Q ss_pred             EEEEEccC-CCCHHH
Q 047395          171 ICIVFEML-GPSLYD  184 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~  184 (432)
                      .+.+++|+ |..|.+
T Consensus       108 ~vrLl~~l~G~~l~~  122 (1013)
T PRK06148        108 LLRLLSWLPGTPLAE  122 (1013)
T ss_pred             EEEEEeccCCCcHHh
Confidence            67889999 666654

>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=94.72  E-value=0.074  Score=49.37  Aligned_cols=123  Identities=20%  Similarity=0.262  Sum_probs=85.1

Q ss_pred             EEeeeecccceEEEEEEec-------C---CCcEEEEEEeechhh---------------------------hhHhHHHH
Q 047395           99 ILRKIGEGTFGQVLDCLDR-------E---TGETVAIKVVRSIKK---------------------------YREAAMTE  141 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~-------~---~~~~vaiK~~~~~~~---------------------------~~~~~~~E  141 (432)
                      |-..|..|.-+.|+.|.--       .   ....+|||+++..-.                           ..-...+|
T Consensus       256 i~GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKDDfRFKDRFSK~NpR~i~~mWAEkE  335 (531)
T KOG2269|consen  256 IDGIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKDDFRFKDRFSKQNPRGILKMWAEKE  335 (531)
T ss_pred             hhhhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhccchhhhhhhcccCcHHHHHHHHHHH
Confidence            4567888888999888421       1   134689998752110                           01124567


Q ss_pred             HHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccCCCC--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HhCCc
Q 047395          142 IDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREIGRQLLECVAFM-HDLRL  218 (432)
Q Consensus       142 ~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~--L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~i  218 (432)
                      ...|.++.......|-+|.+.       ...|||-|+|.+  -.--|+.   ..++..+.+..-.|+..++.-| |++-+
T Consensus       336 mhNL~RMq~~GlpcP~vV~lk-------khvLVMsFiGd~~~aAPkLK~---v~l~d~E~~~aY~q~~~~M~~lY~Ec~L  405 (531)
T KOG2269|consen  336 MHNLSRMQKHGLPCPQVVKLK-------KHVLVMSFIGDQGLAAPKLKN---VELTDDERRNAYDQVQSIMCRLYKECLL  405 (531)
T ss_pred             HHHHHHHHhcCCCCCceeeee-------cceEEEEeecCCCCCCccccc---cccChHHHHHHHHHHHHHHHHHHHhhhe
Confidence            777888887777777777764       346899998532  2222322   2488899999999999998877 67899


Q ss_pred             EeccCCCCcEEee
Q 047395          219 IHTDLKPENILFV  231 (432)
Q Consensus       219 vHrDlkp~NIli~  231 (432)
                      ||-|+.--|+|..
T Consensus       406 VHADlSEyN~Lw~  418 (531)
T KOG2269|consen  406 VHADLSEYNLLWT  418 (531)
T ss_pred             eecchhhhhheec
Confidence            9999999999963

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=94.43  E-value=0.037  Score=51.64  Aligned_cols=73  Identities=19%  Similarity=0.148  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHHHHHHHHH---H-hCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCc
Q 047395          196 VDLVREIGRQLLECVAFM---H-DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST  271 (432)
Q Consensus       196 ~~~~~~i~~qi~~aL~~L---H-~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  271 (432)
                      .+-++.++.||+.-.--+   - ..+.+|-||||+||||.+....-...++-..         -........+|.||.++
T Consensus       274 ~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~---------~vF~Epi~~~LnDFDfS  344 (434)
T PF05445_consen  274 VEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGNRN---------YVFKEPIRCCLNDFDFS  344 (434)
T ss_pred             HHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECCeE---------EEecccceeeecccCHH
Confidence            455777888876543112   1 3579999999999998764322211111100         00234556789999988


Q ss_pred             ccccCC
Q 047395          272 AYEHQE  277 (432)
Q Consensus       272 ~~~~~~  277 (432)
                      ...+-.
T Consensus       345 qv~~i~  350 (434)
T PF05445_consen  345 QVANII  350 (434)
T ss_pred             Hhcccc
Confidence            765443

; GO: 0004672 protein kinase activity, 0005524 ATP binding

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	432
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		5e-94
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		2e-87
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		5e-87
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		9e-87
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		1e-86
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		4e-86
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		6e-68
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		2e-53
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-53
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-53
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		9e-50
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-49
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		4e-49
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		3e-42
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		1e-41
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		1e-41
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		9e-35
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		1e-34
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-29
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-29
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-29
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-29
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-29
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-28
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-28
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		1e-28
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-28
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-28
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-28
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-28
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-28
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-28
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-28
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-28
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-28
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		3e-28
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		3e-28
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-28
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		3e-28
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		3e-28
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-28
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		3e-28
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		3e-28
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		3e-28
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		3e-28
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-28
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		3e-28
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		3e-28
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		3e-28
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		3e-28
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		4e-28
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-28
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-27
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-27
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-27
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		2e-26
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-25
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-25
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-25
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-25
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		3e-25
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		5e-25
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		7e-25
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		8e-25
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		9e-25
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		1e-24
4exu_A	371	Mapk13, Inactive Form Length = 371		1e-24
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-24
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-24
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-24
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-24
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-24
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-24
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-24
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-24
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-24
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-24
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-24
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		3e-24
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		3e-24
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-24
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-24
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		3e-24
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		3e-24
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		3e-24
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		4e-24
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		4e-24
3hec_A	348	P38 In Complex With Imatinib Length = 348		4e-24
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		4e-24
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		4e-24
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		4e-24
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		4e-24
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		4e-24
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		4e-24
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		4e-24
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		4e-24
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		4e-24
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		4e-24
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		4e-24
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		4e-24
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		4e-24
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		4e-24
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		4e-24
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		4e-24
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		4e-24
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		4e-24
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		4e-24
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		4e-24
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		4e-24
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		4e-24
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		4e-24
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		5e-24
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		5e-24
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		5e-24
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		5e-24
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		5e-24
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		5e-24
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		5e-24
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-23
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-23
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		3e-23
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		3e-23
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		3e-23
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		4e-23
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		4e-23
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		4e-23
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		4e-23
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		5e-23
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		5e-23
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		5e-23
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		5e-23
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		5e-23
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-23
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-23
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		7e-23
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		8e-23
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		8e-23
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		8e-23
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		9e-23
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		9e-23
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		1e-22
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-22
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		2e-22
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-22
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		2e-22
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-22
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		3e-22
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		4e-22
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-22
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		5e-22
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		8e-22
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		9e-22
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-21
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-21
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-21
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-21
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		4e-21
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-20
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		2e-20
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		5e-20
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-20
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		8e-20
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		8e-20
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		1e-19
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-19
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		2e-19
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-19
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-19
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		2e-19
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		2e-19
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-19
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		2e-19
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-19
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		2e-19
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-19
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-19
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-19
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-19
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		3e-19
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		3e-19
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		3e-19
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		3e-19
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		3e-19
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-19
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-19
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		3e-19
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		3e-19
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-19
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		3e-19
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-19
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		4e-19
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		4e-19
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		4e-19
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		4e-19
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		4e-19
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		5e-19
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		5e-19
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		5e-19
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		7e-19
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		7e-19
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		8e-19
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		8e-19
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		8e-19
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		8e-19
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		8e-19
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		8e-19
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		9e-19
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		9e-19
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		9e-19
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		9e-19
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		1e-18
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		1e-18
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		1e-18
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		1e-18
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		1e-18
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-18
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		1e-18
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		1e-18
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-18
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		1e-18
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-18
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-18
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-18
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		2e-18
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-18
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-18
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-18
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-18
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-18
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-18
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-18
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-18
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-18
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-18
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-18
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		3e-18
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		3e-18
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-18
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		3e-18
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		7e-18
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		1e-17
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		1e-17
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		2e-17
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-17
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		3e-17
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		4e-17
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		5e-17
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		5e-17
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		6e-17
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		6e-17
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		8e-17
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		9e-17
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-16
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-16
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-16
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		1e-16
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		1e-16
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-16
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		2e-16
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-16
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		2e-16
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		3e-16
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		3e-16
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		3e-16
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		3e-16
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-16
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		3e-16
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		3e-16
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		4e-16
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		4e-16
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		4e-16
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		4e-16
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		4e-16
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		4e-16
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		4e-16
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		4e-16
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		4e-16
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		4e-16
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		4e-16
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		4e-16
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		5e-16
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		7e-16
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		8e-16
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-15
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-15
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-15
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-15
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-15
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-15
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-15
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-15
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-15
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-15
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-15
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		3e-15
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		3e-15
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		3e-15
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		4e-15
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-15
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		5e-15
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		5e-15
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		6e-15
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		6e-15
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		8e-15
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		8e-15
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		9e-15
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		1e-14
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-14
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		2e-14
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-14
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		2e-14
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		2e-14
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-14
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-14
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		3e-14
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-14
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		3e-14
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		3e-14
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		3e-14
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		3e-14
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-14
2oza_A	356	Structure Of P38alpha Complex Length = 356		3e-14
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-14
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		3e-14
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-14
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		3e-14
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		4e-14
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		4e-14
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		6e-14
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		7e-14
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		7e-14
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		9e-14
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		1e-13
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		1e-13
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-13
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-13
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-13
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		1e-13
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-13
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-13
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		2e-13
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-13
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		3e-13
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		3e-13
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		4e-13
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		4e-13
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		4e-13
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		4e-13
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		5e-13
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		6e-13
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		8e-13
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		8e-13
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		9e-13
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		1e-12
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		1e-12
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-12
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		1e-12
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		1e-12
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-12
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-12
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-12
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-12
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-12
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-12
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-12
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-12
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		2e-12
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-12
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-12
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-12
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-12
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-12
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-12
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-12
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		3e-12
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		3e-12
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-12
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		3e-12
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		4e-12
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		5e-12
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		5e-12
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		6e-12
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		6e-12
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		6e-12
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		7e-12
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		7e-12
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		8e-12
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		8e-12
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		8e-12
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		9e-12
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-11
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-11
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-11
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		1e-11
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-11
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		1e-11
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		2e-11
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-11
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-11
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-11
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-11
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-11
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-11
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		2e-11
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-11
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-11
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-11
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-11
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-11
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-11
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-11
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		3e-11
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-11
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-11
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-11
3soa_A	444	Full-Length Human Camkii Length = 444		3e-11
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-11
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-11
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		4e-11
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		4e-11
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		4e-11
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		4e-11
4ae6_A	343	Structure And Function Of The Human Sperm-specific		4e-11
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		4e-11
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		5e-11
4ae9_A	343	Structure And Function Of The Human Sperm-specific		5e-11
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		6e-11
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		7e-11
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		7e-11
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		7e-11
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		7e-11
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		7e-11
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		7e-11
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		7e-11
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		8e-11
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		8e-11
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		8e-11
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		8e-11
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		8e-11
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		8e-11
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		8e-11
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		9e-11
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		9e-11
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		9e-11
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		1e-10
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-10
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		1e-10
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		1e-10
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		1e-10
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		1e-10
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		1e-10
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-10
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-10
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		2e-10
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-10
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-10
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-10
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		2e-10
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-10
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-10
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		2e-10
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		2e-10
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-10
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-10
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		2e-10
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-10
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		3e-10
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		3e-10
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		3e-10
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-10
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		4e-10
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		4e-10
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		4e-10
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		5e-10
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		5e-10
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		5e-10
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		7e-10
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		8e-10
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		9e-10
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		1e-09
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		1e-09
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		1e-09
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-09
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		1e-09
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		1e-09
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		1e-09
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-09
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-09
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-09
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		1e-09
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-09
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		1e-09
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-09
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		2e-09
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		2e-09
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-09
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-09
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		2e-09
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-09
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-09
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-09
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		2e-09
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		2e-09
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		2e-09
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-09
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-09
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-09
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-09
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		2e-09
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		2e-09
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-09
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-09
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-09
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-09
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-09
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		2e-09
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		2e-09
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-09
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		3e-09
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		3e-09
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		3e-09
2csn_A	297	Binary Complex Of Casein Kinase-1 With Cki7 Length		3e-09
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-09
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		3e-09
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		3e-09
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		4e-09
1eh4_A	298	Binary Complex Of Casein Kinase-1 From S. Pombe Wit		4e-09
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		4e-09
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		4e-09
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		4e-09
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		4e-09
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		4e-09
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		4e-09
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		4e-09
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		4e-09
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		4e-09
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		4e-09
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		4e-09
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		5e-09
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		5e-09
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		5e-09
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		5e-09
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		5e-09
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		5e-09
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		5e-09
3kk9_A	282	Camkii Substrate Complex B Length = 282		5e-09
3kk8_A	284	Camkii Substrate Complex A Length = 284		5e-09
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		5e-09
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		5e-09
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		5e-09
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		6e-09
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		6e-09
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		6e-09
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		7e-09
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		7e-09
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		7e-09
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-09
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		7e-09
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		8e-09
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		8e-09
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		8e-09
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		8e-09
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-09
2pl0_A	289	Lck Bound To Imatinib Length = 289		9e-09
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		9e-09
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		1e-08
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		1e-08
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		1e-08
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		1e-08
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-08
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		1e-08
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		1e-08
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		1e-08
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-08
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		1e-08
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		1e-08
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		1e-08
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-08
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		2e-08
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		2e-08
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		2e-08
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		2e-08
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-08
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-08
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-08
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-08
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-08
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-08
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		2e-08
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-08
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		2e-08
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-08
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-08
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		2e-08
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-08
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		2e-08
2izr_A	330	Structure Of Casein Kinase Gamma 3 In Complex With		2e-08
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		2e-08
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		2e-08
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-08
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-08
2chl_A	351	Structure Of Casein Kinase 1 Gamma 3 Length = 351		2e-08
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		3e-08
4hgl_A	330	Crystal Structure Of Ck1g3 With Compound 1 Length =		3e-08
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		3e-08
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-08
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		3e-08
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		3e-08
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		3e-08
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		4e-08
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-08
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-08
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		4e-08
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		4e-08
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		4e-08
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-08
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		4e-08
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		4e-08
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		4e-08
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-08
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		4e-08
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		4e-08
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		4e-08
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-08
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		5e-08
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		5e-08
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		5e-08
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		5e-08
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		5e-08
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		5e-08
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		5e-08
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		5e-08
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		6e-08
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		6e-08
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		6e-08
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		6e-08
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		6e-08
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		6e-08
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		6e-08
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		7e-08
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		7e-08
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		7e-08
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		7e-08
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		7e-08
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		7e-08
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		7e-08
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		8e-08
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		8e-08
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		8e-08
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		8e-08
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		9e-08
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		9e-08
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		9e-08
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		9e-08
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		9e-08
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-07
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-07
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-07
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-07
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		1e-07
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		1e-07
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-07
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-07
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		1e-07
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-07
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-07
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-07
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-07
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-07
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-07
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-07
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-07
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		1e-07
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-07
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-07
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-07
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-07
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		1e-07
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-07
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-07
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		1e-07
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-07
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-07
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-07
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-07
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		2e-07
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-07
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-07
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		2e-07
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-07
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		2e-07
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		2e-07
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		2e-07
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-07
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		2e-07
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		2e-07
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		2e-07
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-07
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		3e-07
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-07
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-07
2c47_A	313	Structure Of Casein Kinase 1 Gamma 2 Length = 313		3e-07
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-07
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		3e-07
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-07
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		3e-07
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		3e-07
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		3e-07
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		3e-07
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		3e-07
2cmw_A	310	Structure Of Human Casein Kinase 1 Gamma-1 In Compl		4e-07
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		4e-07
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		4e-07
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		4e-07
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		4e-07
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		4e-07
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		5e-07
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		5e-07
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		7e-07
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		7e-07
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		7e-07
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		7e-07
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		8e-07
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-07
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-06
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-06
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-06
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-06
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-06
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		1e-06
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-06
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		1e-06
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-06
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-06
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		2e-06
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		2e-06
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-06
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-06
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-06
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-06
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		2e-06
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-06
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		2e-06
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		2e-06
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-06
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-06
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		2e-06
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		2e-06
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		2e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-06
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-06
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-06
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		3e-06
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		3e-06
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		3e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-06
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		3e-06
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		3e-06
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		3e-06
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		3e-06
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		3e-06
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-06
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		3e-06
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		4e-06
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		4e-06
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		4e-06
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-06
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-06
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-06
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-06
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		4e-06
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-06
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-06
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-06
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		5e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		5e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		5e-06
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		5e-06
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		5e-06
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		5e-06
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		5e-06
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		5e-06
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		5e-06
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		6e-06
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		6e-06
3a4o_X	286	Lyn Kinase Domain Length = 286		6e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		6e-06
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		6e-06
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		6e-06
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		7e-06
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		7e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		7e-06
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		7e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		8e-06
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-06
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		8e-06
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		9e-06
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		9e-06
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		9e-06
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		1e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-05
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		1e-05
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-05
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		1e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-05
4fl2_A	636	Structural And Biophysical Characterization Of The		1e-05
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		1e-05
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		1e-05
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		1e-05
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		1e-05
4fl3_A	635	Structural And Biophysical Characterization Of The		1e-05
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-05
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-05
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		1e-05
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-05
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		2e-05
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-05
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		2e-05
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-05
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		2e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-05
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		2e-05
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		2e-05
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-05
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		2e-05
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-05
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-05
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		3e-05
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		3e-05
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		3e-05
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		3e-05
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		3e-05
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		3e-05
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		3e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-05
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		3e-05
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		3e-05
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		3e-05
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		3e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-05
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-05
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		3e-05
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		3e-05
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		3e-05
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-05
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		4e-05
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-05
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		4e-05
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		4e-05
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		4e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		4e-05
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		4e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		4e-05
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-05
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		4e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		4e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		5e-05
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		5e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		5e-05
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		5e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		5e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		5e-05
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		6e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-05
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		6e-05
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		6e-05
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		6e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		6e-05
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		6e-05
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		7e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		7e-05
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-05
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		7e-05
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-05
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		7e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		7e-05
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		8e-05
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		8e-05
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		8e-05
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		8e-05
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		8e-05
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		9e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		9e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		9e-05
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		1e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		2e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		2e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-04
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		2e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-04
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-04
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-04
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		2e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		3e-04
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		3e-04
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		3e-04
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		3e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		3e-04
2v62_A	345	Structure Of Vaccinia-Related Kinase 2 Length = 345		3e-04
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		3e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		3e-04
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		3e-04
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		3e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		3e-04
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		4e-04
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		4e-04
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		4e-04
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		5e-04
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		5e-04
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		6e-04
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		7e-04
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		8e-04
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		8e-04
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		8e-04
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-04

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score =  341 bits (874), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 169/350 (48%), Positives = 239/350 (68%), Gaps = 15/350 (4%)
Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYREA 137
           DD +GH ++ +G+ L  RY+I+  +GEGTFG+V+ C+D R  G  VA+K++++++KY+EA
Sbjct: 17  DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 76
Query: 138 AMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
           A  EI+VLE +   D      CVQ+ +WFDY  H+CI FE+LG S +DFL+ NNY P+P+
Sbjct: 77  ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 136
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
             VR +  QL + V F+HD +L HTDLKPENILFV+       DY++T       +  +R
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS------DYELTYNLEKKRD--ER 188
Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
             KS+A++V+DFGS  ++H+ H+ IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   
Sbjct: 189 SVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 248
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G  LFQTH+N EHLAMMER+LGPIP  M+++  K  +K+  RGRLDW E  ++   ++  
Sbjct: 249 GFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVREN 306
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
            K P  + L  +  +H    L DL++ +L Y+P+ RLT  +AL+HPFF R
Sbjct: 307 CK-PLRRYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 353

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score =  319 bits (817), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 160/343 (46%), Positives = 230/343 (67%), Gaps = 15/343 (4%)
Query: 84  HYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETG-ETVAIKVVRSIKKYREAAMTEI 142
           H +   G+ L++RY+I+  +GEG FG+V++C+D + G   VA+K+V+++ +Y EAA +EI
Sbjct: 3   HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 143 DVLELLKRYD-RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE 201
            VLE L   D  S  RCVQ+  WF++  HICIVFE+LG S YDF+++N + PF +D +R+
Sbjct: 63  QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
           +  Q+ + V F+H  +L HTDLKPENILFV  +Y +  + K+     T +N         
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN--------P 174
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
            IKV+DFGS  Y+ + H+ +VSTRHYRAPEVIL LGWS PCD+WS+GCILIE   G  +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
            TH++ EHLAMMER+LGP+P+HM+++  K   K+    RLDW E +++   +    K P 
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACK-PL 291
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            + ++ Q V+H    L DL+Q +L YDP+ R+T  +ALKHPFF
Sbjct: 292 KEFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score =  318 bits (814), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 154/349 (44%), Positives = 232/349 (66%), Gaps = 15/349 (4%)
Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREA 137
           DDK+GH +  +G+ L  RY+I+  +GEGTFG+V++CLD   G++ VA+K++R++ KYREA
Sbjct: 35  DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 94
Query: 138 AMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
           A  EI+VL+ +K  D+     CV + +WF++  H+CI FE+LG + ++FL++NN++P+P+
Sbjct: 95  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 154
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
             VR +  QL   + F+H+ +L HTDLKPENILFV+ E+  + +   +    +       
Sbjct: 155 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS------- 207
Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
             K+++I+V DFGS  ++H+ H  IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E   
Sbjct: 208 -VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 266
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G  LFQTHEN EHL MME++LGPIP HM+ R  K  +K+  +G L W E ++    +K  
Sbjct: 267 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKEN 324
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            K P    ++   ++H    L DL++ +L +DP+ R+T  +AL HPFF 
Sbjct: 325 CK-PLKSYMLQDSLEHVQ--LFDLMRRMLEFDPAQRITLAEALLHPFFA 370

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score =  317 bits (812), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 154/349 (44%), Positives = 232/349 (66%), Gaps = 15/349 (4%)
Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREA 137
           DDK+GH +  +G+ L  RY+I+  +GEGTFG+V++CLD   G++ VA+K++R++ KYREA
Sbjct: 12  DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 71
Query: 138 AMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
           A  EI+VL+ +K  D+     CV + +WF++  H+CI FE+LG + ++FL++NN++P+P+
Sbjct: 72  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 131
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
             VR +  QL   + F+H+ +L HTDLKPENILFV+ E+  + +   +    +       
Sbjct: 132 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS------- 184
Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
             K+++I+V DFGS  ++H+ H  IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E   
Sbjct: 185 -VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 243
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G  LFQTHEN EHL MME++LGPIP HM+ R  K  +K+  +G L W E ++    +K  
Sbjct: 244 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKEN 301
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            K P    ++   ++H    L DL++ +L +DP+ R+T  +AL HPFF 
Sbjct: 302 CK-PLKSYMLQDSLEHVQ--LFDLMRRMLEFDPAQRITLAEALLHPFFA 347

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score =  317 bits (811), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 154/349 (44%), Positives = 232/349 (66%), Gaps = 15/349 (4%)
Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREA 137
           DDK+GH +  +G+ L  RY+I+  +GEGTFG+V++CLD   G++ VA+K++R++ KYREA
Sbjct: 3   DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62
Query: 138 AMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
           A  EI+VL+ +K  D+     CV + +WF++  H+CI FE+LG + ++FL++NN++P+P+
Sbjct: 63  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
             VR +  QL   + F+H+ +L HTDLKPENILFV+ E+  + +   +    +       
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS------- 175
Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
             K+++I+V DFGS  ++H+ H  IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E   
Sbjct: 176 -VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G  LFQTHEN EHL MME++LGPIP HM+ R  K  +K+  +G L W E ++    +K  
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKEN 292
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            K P    ++   ++H    L DL++ +L +DP+ R+T  +AL HPFF 
Sbjct: 293 CK-PLKSYMLQDSLEHVQ--LFDLMRRMLEFDPAQRITLAEALLHPFFA 338

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score =  315 bits (807), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 158/343 (46%), Positives = 228/343 (66%), Gaps = 15/343 (4%)
Query: 84  HYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETG-ETVAIKVVRSIKKYREAAMTEI 142
           H +   G+ L++RY+I+  +GEG FG+V++C+D + G   VA+K+V+++ +Y EAA +EI
Sbjct: 3   HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 143 DVLELLKRYD-RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE 201
            VLE L   D  S  RCVQ+  WF++  HICIVFE+LG S YDF+++N + PF +D +R+
Sbjct: 63  QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
           +  Q+ + V F+H  +L HTDLKPENILFV  +Y +  + K+     T +N         
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN--------P 174
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
            IKV+DFGS  Y+ + H+ +V  RHYRAPEVIL LGWS PCD+WS+GCILIE   G  +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
            TH++ EHLAMMER+LGP+P+HM+++  K   K+    RLDW E +++   +    K P 
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACK-PL 291
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            + ++ Q V+H    L DL+Q +L YDP+ R+T  +ALKHPFF
Sbjct: 292 KEFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score =  254 bits (649), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 140/355 (39%), Positives = 213/355 (60%), Gaps = 17/355 (4%)
Query: 76  WRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR 135
           ++ DD+  H+ +  G  L + + ++RK+G+GTFG+VL C   +  +  A+KVVR+IKKY 
Sbjct: 16  FQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT 75
Query: 136 EAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP 195
            +A  E D+L+ ++  D + +  V+    F Y +H+C++FE LGPSLY+ + +NNY  F 
Sbjct: 76  RSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFH 135
Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD---VN 252
           ++ ++    ++L+ + ++  + L HTDLKPENIL   P + K     +T R  TD   + 
Sbjct: 136 IEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEK---SLITVRRVTDGKKIQ 192
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
            Y+   KS+ IK+IDFG   ++   H  I++TR YRAPEVIL LGW    DMWS GC+L 
Sbjct: 193 IYR--TKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250
Query: 313 ELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKP-AEKFVRRG--RLDWPEGATS 369
           EL +G  LF+THE++EHLAMME ++ PIP++ML    K    K+V +   +L WPE A+S
Sbjct: 251 ELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASS 310
Query: 370 RESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
             SIK V K   L  ++   +        D L  +L+ DP+ R +  + LKH F 
Sbjct: 311 INSIKHVKKCLPLYKIIKHEL------FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score =  206 bits (525), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/360 (34%), Positives = 188/360 (52%), Gaps = 38/360 (10%)
Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA 138
           DD  G Y+    +++  RY++L+ IG+G+FGQV+   D +  + VA+K+VR+ K++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 139 MTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
             EI +LE L++ D+  +   + +   F +RNHIC+ FE+L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
           LVR+    +L+C+  +H  R+IH DLKPENIL            K   RS          
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILL-----------KQQGRS---------- 239
Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                IKVIDFGS+ YEHQ     + +R YRAPEVILG  +  P DMWS+GCIL EL +G
Sbjct: 240 ----GIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
             L    +  + LA M  +LG +P   L    K A+ FV           T+      VL
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 378 KLPRLQNLVMQHVDHSAGY-----------LIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
              R +   ++    S  +            +D L+  L +DP+ R+T   AL+HP+  R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score =  206 bits (525), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/360 (34%), Positives = 188/360 (52%), Gaps = 38/360 (10%)
Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA 138
           DD  G Y+    +++  RY++L+ IG+G+FGQV+   D +  + VA+K+VR+ K++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 139 MTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
             EI +LE L++ D+  +   + +   F +RNHIC+ FE+L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
           LVR+    +L+C+  +H  R+IH DLKPENIL            K   RS          
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILL-----------KQQGRS---------- 239
Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                IKVIDFGS+ YEHQ     + +R YRAPEVILG  +  P DMWS+GCIL EL +G
Sbjct: 240 ----GIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
             L    +  + LA M  +LG +P   L    K A+ FV           T+      VL
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 378 KLPRLQNLVMQHVDHSAGY-----------LIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
              R +   ++    S  +            +D L+  L +DP+ R+T   AL+HP+  R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score =  206 bits (523), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/360 (34%), Positives = 187/360 (51%), Gaps = 38/360 (10%)
Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA 138
           DD  G Y+    +++  RY++L+ IG+G FGQV+   D +  + VA+K+VR+ K++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 139 MTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
             EI +LE L++ D+  +   + +   F +RNHIC+ FE+L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
           LVR+    +L+C+  +H  R+IH DLKPENIL            K   RS          
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILL-----------KQQGRS---------- 239
Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                IKVIDFGS+ YEHQ     + +R YRAPEVILG  +  P DMWS+GCIL EL +G
Sbjct: 240 ----GIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
             L    +  + LA M  +LG +P   L    K A+ FV           T+      VL
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 378 KLPRLQNLVMQHVDHSAGY-----------LIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
              R +   ++    S  +            +D L+  L +DP+ R+T   AL+HP+  R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score =  194 bits (493), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 123/360 (34%), Positives = 187/360 (51%), Gaps = 53/360 (14%)
Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
           GE    RY+I   IG+G+FGQV+   DR   E VAIK++++ K +   A  E+ +LEL+ 
Sbjct: 30  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 89
Query: 150 RYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
           ++D       V ++  F +RNH+C+VFEML  +LYD LR  N+R   ++L R+  +Q+  
Sbjct: 90  KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 209 CVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
            + F+   +L +IH DLKPENIL  +P                         K SAIK++
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCNP-------------------------KRSAIKIV 184
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           DFGS+    Q     + +R YR+PEV+LG+ +    DMWS+GCIL+E+ +GE LF     
Sbjct: 185 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA---VLKLP--- 380
           ++ +  +  VLG  P H+L +  K A KF  +     P+G  + +  K      K P   
Sbjct: 245 VDQMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTR 299
Query: 381 RLQNLVMQHVDHSAG------------YL--IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           +L N++        G            YL   DL+  +L YDP +R+  + AL+H FF +
Sbjct: 300 KLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 359

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score =  194 bits (492), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/360 (34%), Positives = 187/360 (51%), Gaps = 53/360 (14%)
Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
           GE    RY+I   IG+G+FGQV+   DR   E VAIK++++ K +   A  E+ +LEL+ 
Sbjct: 49  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 150 RYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
           ++D       V ++  F +RNH+C+VFEML  +LYD LR  N+R   ++L R+  +Q+  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 209 CVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
            + F+   +L +IH DLKPENIL  +P                         K SAIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNP-------------------------KRSAIKIV 203
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           DFGS+    Q     + +R YR+PEV+LG+ +    DMWS+GCIL+E+ +GE LF     
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESI---KAVLKLP--- 380
           ++ +  +  VLG  P H+L +  K A KF  +     P+G  + +     K   K P   
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTR 318
Query: 381 RLQNLVMQHVDHSAG------------YL--IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           +L N++        G            YL   DL+  +L YDP +R+  + AL+H FF +
Sbjct: 319 KLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score =  192 bits (487), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/360 (33%), Positives = 186/360 (51%), Gaps = 53/360 (14%)
Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
           GE    RY+I   IG+G+FGQV+   DR   E VAIK++++ K +   A  E+ +LEL+ 
Sbjct: 49  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 150 RYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
           ++D       V ++  F +RNH+C+VFEML  +LYD LR  N+R   ++L R+  +Q+  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 209 CVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
            + F+   +L +IH DLKPENIL  +P                         K  AIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNP-------------------------KRXAIKIV 203
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           DFGS+    Q     + +R YR+PEV+LG+ +    DMWS+GCIL+E+ +GE LF     
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA---VLKLP--- 380
           ++ +  +  VLG  P H+L +  K A KF  +     P+G  + +  K      K P   
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTR 318
Query: 381 RLQNLVMQHVDHSAG------------YL--IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           +L N++        G            YL   DL+  +L YDP +R+  + AL+H FF +
Sbjct: 319 KLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score =  169 bits (428), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 187/382 (48%), Gaps = 47/382 (12%)
Query: 81  KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
           K G++   +G+    RY ++RK+G G F  V  C D +    VA+KVV+S + Y E A+ 
Sbjct: 17  KGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALD 76
Query: 141 EIDVLELLKRYDRSGSR---CVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRP 193
           EI +L+ ++  D S       VQ+ + F        H+C+VFE+LG  L  ++ K+NY+ 
Sbjct: 77  EIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQG 136
Query: 194 FPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILF-VSPEYLK-----IPDYKVTAR 246
            PV  V+ I RQ+L+ + ++H   ++IHTD+KPENIL  V   Y++       +++    
Sbjct: 137 LPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGA 196
Query: 247 SPTDVNYYKRLPKSSA--------------IKVIDFGSTAYEHQEHNYIVSTRHYRAPEV 292
            P   +     P +                +K+ D G+  + H+     + TR YR+ EV
Sbjct: 197 PPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEV 256
Query: 293 ILGLGWSYPCDMWSVGCILIELCSGEALFQTHE------NLEHLAMMERVLGPIPQHMLK 346
           ++G G+S P D+WS  C+  EL +G+ LF+ H       + +H+A +  +LG IP+H   
Sbjct: 257 LIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFAL 316
Query: 347 RVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD---HSAGYLIDLLQG 403
                 E F RRG L        R   K  LK   L +++++        A    D L  
Sbjct: 317 SGKYSREFFNRRGEL--------RHITK--LKPWSLFDVLVEKYGWPHEDAAQFTDFLIP 366
Query: 404 LLRYDPSSRLTAHDALKHPFFT 425
           +L   P  R +A + L+HP+  
Sbjct: 367 MLEMVPEKRASAGECLRHPWLN 388

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 196/384 (51%), Gaps = 49/384 (12%)
Query: 81  KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
           K G++L  +G+    RY ++RK+G G F  V    D +  + VA+KVV+S + Y E A+ 
Sbjct: 7   KGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD 66
Query: 141 EIDVLELLKRYDRSGSR---CVQIRNWFDYR----NHICIVFEMLGPSLYDFLRKNNYRP 193
           EI +L+ ++  D +       VQ+ + F        HIC+VFE+LG  L  ++ K+NY+ 
Sbjct: 67  EIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG 126
Query: 194 FPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILF-VSPEYLK-----IPDYKVTAR 246
            P+  V++I +Q+L+ + ++H   R+IHTD+KPENIL  V+ +Y++       +++ +  
Sbjct: 127 LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGA 186
Query: 247 SPTDVNYYKRLPKSSA----------------IKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
            P   +     P ++                 +K+ D G+  + H+     + TR YR+ 
Sbjct: 187 PPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSL 246
Query: 291 EVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE------HLAMMERVLGPIPQHM 344
           EV++G G++ P D+WS  C+  EL +G+ LF+ H   E      H+A++  +LG +P+ +
Sbjct: 247 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKL 306
Query: 345 LKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH---VDHSAGYLIDLL 401
           +       E F ++G L         + I  +      + LV ++    + +AG+  D L
Sbjct: 307 IVAGKYSKEFFTKKGDL---------KHITKLKPWGLFEVLVEKYEWSQEEAAGF-TDFL 356
Query: 402 QGLLRYDPSSRLTAHDALKHPFFT 425
             +L   P  R TA + L+HP+  
Sbjct: 357 LPMLELIPEKRATAAECLRHPWLN 380

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 196/384 (51%), Gaps = 49/384 (12%)
Query: 81  KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
           K G++L  +G+    RY ++RK+G G F  V    D +  + VA+KVV+S + Y E A+ 
Sbjct: 23  KGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD 82
Query: 141 EIDVLELLKRYDRSGSR---CVQIRNWFDYR----NHICIVFEMLGPSLYDFLRKNNYRP 193
           EI +L+ ++  D +       VQ+ + F        HIC+VFE+LG  L  ++ K+NY+ 
Sbjct: 83  EIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG 142
Query: 194 FPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILF-VSPEYLK-----IPDYKVTAR 246
            P+  V++I +Q+L+ + ++H   R+IHTD+KPENIL  V+ +Y++       +++ +  
Sbjct: 143 LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGA 202
Query: 247 SPTDVNYYKRLPKSSA----------------IKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
            P   +     P ++                 +K+ D G+  + H+     + TR YR+ 
Sbjct: 203 PPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSL 262
Query: 291 EVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE------HLAMMERVLGPIPQHM 344
           EV++G G++ P D+WS  C+  EL +G+ LF+ H   E      H+A++  +LG +P+ +
Sbjct: 263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKL 322
Query: 345 LKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH---VDHSAGYLIDLL 401
           +       E F ++G L         + I  +      + LV ++    + +AG+  D L
Sbjct: 323 IVAGKYSKEFFTKKGDL---------KHITKLKPWGLFEVLVEKYEWSQEEAAGF-TDFL 372
Query: 402 QGLLRYDPSSRLTAHDALKHPFFT 425
             +L   P  R TA + L+HP+  
Sbjct: 373 LPMLELIPEKRATAAECLRHPWLN 396

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score =  144 bits (363), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 175/350 (50%), Gaps = 51/350 (14%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           +RY ++RK+G G F  V    D      VA+K+VR  K Y EAA  EI +L+ +   D +
Sbjct: 19  ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 155 ------GSRCVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR 204
                  +  +++ + F+++     H+ +VFE+LG +L   ++K  +R  P+  V++I +
Sbjct: 79  KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 205 QLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
           QLL  + +MH    +IHTD+KPEN+L      ++I D      SP ++           I
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVL------MEIVD------SPENL---------IQI 177
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
           K+ D G+  +  + +   + TR YR+PEV+LG  W    D+WS  C++ EL +G+ LF+ 
Sbjct: 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237
Query: 324 HE------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
            E      + +H+A +  +LG +P ++L+        F  RG L        R   K  L
Sbjct: 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLL--------RNISK--L 287
Query: 378 KLPRLQNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           K   L++++ +    S   A  + D L  +L+ DP  R  A   + HP+ 
Sbjct: 288 KFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score =  144 bits (363), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 175/350 (50%), Gaps = 51/350 (14%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           +RY ++RK+G G F  V    D      VA+K+VR  K Y EAA  EI +L+ +   D +
Sbjct: 19  ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 155 ------GSRCVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR 204
                  +  +++ + F+++     H+ +VFE+LG +L   ++K  +R  P+  V++I +
Sbjct: 79  KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 205 QLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
           QLL  + +MH    +IHTD+KPEN+L      ++I D      SP ++           I
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVL------MEIVD------SPENL---------IQI 177
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
           K+ D G+  +  + +   + TR YR+PEV+LG  W    D+WS  C++ EL +G+ LF+ 
Sbjct: 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237
Query: 324 HE------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
            E      + +H+A +  +LG +P ++L+        F  RG L        R   K  L
Sbjct: 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLL--------RNISK--L 287
Query: 378 KLPRLQNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           K   L++++ +    S   A  + D L  +L+ DP  R  A   + HP+ 
Sbjct: 288 KFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 153/331 (46%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L DF+  +     P+ L++    QLL+ +AF H  
Sbjct: 64  -IVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKPEN+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 123 RVLHRDLKPENLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG  P  ++                 WP G TS    K        Q+   V+  +D  
Sbjct: 219 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 153/331 (46%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 66
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L DF+  +     P+ L++    QLL+ +AF H  
Sbjct: 67  -IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 166
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG  P  ++                 WP G TS    K        Q+   V+  +D  
Sbjct: 222 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 262
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 263 GR---SLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 153/331 (46%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 65
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L DF+  +     P+ L++    QLL+ +AF H  
Sbjct: 66  -IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 165
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG  P  ++                 WP G TS    K        Q+   V+  +D  
Sbjct: 221 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 261
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 262 GR---SLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  124 bits (312), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 65  -IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKPEN+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 164
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG  P  ++                 WP G TS    K        Q+   V+  +D  
Sbjct: 220 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 260
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 261 GR---SLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  124 bits (312), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 66
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 67  -IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKPEN+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 166
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG  P  ++                 WP G TS    K        Q+   V+  +D  
Sbjct: 222 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 262
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 263 GR---SLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 65  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKPEN+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 164
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG  P  ++                 WP G TS    K        Q+   V+  +D  
Sbjct: 220 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 260
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 261 GR---SLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 65
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 66  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKPEN+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 125 RVLHRDLKPENLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 165
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG  P  ++                 WP G TS    K        Q+   V+  +D  
Sbjct: 221 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 261
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 262 GR---SLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 163/356 (45%), Gaps = 77/356 (21%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
           +S++K L K+G GT+  V   L++ TG  VA+K V+  S +     A+ EI +++ LK  
Sbjct: 4   SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH- 62
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRK----NNYRPFPVDLVREIGRQLL 207
                  V++ +     N + +VFE +   L  ++      N  R   ++LV+    QLL
Sbjct: 63  ----ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           + +AF H+ +++H DLKP+N+L      LK+ D+               L ++  I V  
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFG--------------LARAFGIPVNT 164
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           F S           V T  YRAP+V++G   +S   D+WS GCIL E+ +G+ LF    +
Sbjct: 165 FSSE----------VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR----- 381
            E L ++  ++G            P E         WP          +V KLP+     
Sbjct: 215 EEQLKLIFDIMG-----------TPNESL-------WP----------SVTKLPKYNPNI 246
Query: 382 -------LQNLVMQHVDHSA-GYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY 429
                  L+ ++  H      G L+D L GLL+ +P  RL+A  AL HP+F   Y+
Sbjct: 247 QQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 153/338 (45%), Gaps = 51/338 (15%)
Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
           G      ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK
Sbjct: 1   GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +      V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ 
Sbjct: 61  ELNHPN--IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +AF H  R++H DLKP+N+L  +   +K+ D+               L ++  + V    
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV---- 160
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLE 328
              Y H+     V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++
Sbjct: 161 -RTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--V 386
            L  + R LG            P E       + WP G TS    K        Q+   V
Sbjct: 215 QLFRIFRTLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKV 255
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +  +D        LL  +L YDP+ R++A  AL HPFF
Sbjct: 256 VPPLDEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 153/338 (45%), Gaps = 51/338 (15%)
Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
           G      ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK
Sbjct: 1   GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +      V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ 
Sbjct: 61  ELNHPN--IVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +AF H  R++H DLKP+N+L  +   +K+ D+               L ++  + V    
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV---- 160
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLE 328
              Y H+     V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++
Sbjct: 161 -RTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--V 386
            L  + R LG            P E       + WP G TS    K        Q+   V
Sbjct: 215 QLFRIFRTLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKV 255
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +  +D        LL  +L YDP+ R++A  AL HPFF
Sbjct: 256 VPPLDEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 12  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 70
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 71  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 170
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 171 -----VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 225
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG  P  ++                 WP G TS    K        Q+   V+  +D  
Sbjct: 226 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 266
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 267 GR---SLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 64  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 65  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 164
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 220 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 260
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 261 GR---SLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 65  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 164
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 220 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 260
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 261 GR---SLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 64  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 64  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG  P  ++                 WP G TS    K        Q+   V+  +D  
Sbjct: 219 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 63  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 162
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 218 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 258
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 259 GR---SLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score =  123 bits (308), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 9   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 67
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 68  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 167
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 168 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 222
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG  P  ++                 WP G TS    K        Q+   V+  +D  
Sbjct: 223 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 263
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 264 GR---SLLSQMLHYDPNKRISAKAALAHPFF 291

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score =  123 bits (308), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 64  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 66
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 67  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 166
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 222 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 262
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 263 GR---SLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 65
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 66  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 165
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 221 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 261
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 262 GR---SLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 9   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 67
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 68  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 167
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 168 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 222
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 223 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 263
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 264 GR---SLLSQMLHYDPNKRISAKAALAHPFF 291

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 65
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 66  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 165
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG  P  ++                 WP G TS    K        Q+   V+  +D  
Sbjct: 221 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 261
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 262 GR---SLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 63  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 162
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 218 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 258
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 259 GR---SLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 63  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 162
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 218 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 258
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 259 GR---SLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 12  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 70
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 71  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 170
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 171 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 225
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 226 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 266
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 267 GR---SLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 64  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 178/339 (52%), Gaps = 24/339 (7%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMT--EIDVLELLKRYD 152
           +Y++++K+G+G +G V   +DR TGE VA+K +  + +   +A  T  EI +L  L  ++
Sbjct: 10  KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
              +    +R   D    + +VF+ +   L+  +R N   P     V     QL++ + +
Sbjct: 70  NIVNLLNVLR--ADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV---VYQLIKVIKY 124
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H   L+H D+KP NIL  +  ++K+ D+ ++ RS  ++   +R+  +  + + +     
Sbjct: 125 LHSGGLLHRDMKPSNILLNAECHVKVADFGLS-RSFVNI---RRVTNNIPLSINENTENF 180
Query: 273 YEHQE--HNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
            + Q    +Y V+TR YRAPE++LG   ++   DMWS+GCIL E+  G+ +F     +  
Sbjct: 181 DDDQPILTDY-VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ- 388
           L   ER++G I     + V+     F +       E    R+S K  +   + +NL+++ 
Sbjct: 240 L---ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDI-FTKWKNLLLKI 295
Query: 389 --HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
               D +   L DLL  LL+++P+ R++A+DALKHPF +
Sbjct: 296 NPKADCNEEAL-DLLDKLLQFNPNKRISANDALKHPFVS 333

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 63  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 162
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 218 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 258
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 259 GR---SLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 65  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 164
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 220 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 260
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 261 GR---SLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 64  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 64  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score =  122 bits (306), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 153/338 (45%), Gaps = 51/338 (15%)
Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
           G      ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK
Sbjct: 1   GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +      V++ +     N + +VFE +   L  F+  +     P+ L++    QLL+ 
Sbjct: 61  ELNHPN--IVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +AF H  R++H DLKP+N+L  +   +K+ D+               L ++  + V    
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV---- 160
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLE 328
              Y H+     V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++
Sbjct: 161 -RTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--V 386
            L  + R LG  P  ++                 WP G TS    K        Q+   V
Sbjct: 215 QLFRIFRTLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKV 255
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +  +D        LL  +L YDP+ R++A  AL HPFF
Sbjct: 256 VPPLDEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score =  121 bits (304), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ ++F H  
Sbjct: 64  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+K +R   +      T I  + LLK  +    
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE +   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 63  -IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 162
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 218 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 258
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 259 GR---SLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 151/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+  +R   +      T I  + LLK  +    
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 64  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 151/331 (45%), Gaps = 51/331 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ + KIGEGT+G V    ++ TGE VA+  +R   +      T I  + LLK  +    
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 63  -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R++H DLKP+N+L  +   +K+ D+               L ++  + V       Y H+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 162
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
            LG            P E       + WP G TS    K        Q+   V+  +D  
Sbjct: 218 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 258
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                 LL  +L YDP+ R++A  AL HPFF
Sbjct: 259 GR---SLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 158/340 (46%), Gaps = 60/340 (17%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEIDVLELLK 149
           +  +Y+ + KIGEG++G V  C +R+TG+ VAIK     +     ++ A+ EI +L+ LK
Sbjct: 1   MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                    V +   F  +  + +VFE    ++   L +   R  P  LV+ I  Q L+ 
Sbjct: 61  H-----PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQA 114
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           V F H    IH D+KPENIL                             K S IK+ DFG
Sbjct: 115 VNFCHKHNCIHRDVKPENILIT---------------------------KHSVIKLCDFG 147
Query: 270 STAYEHQEHNYI---VSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
                    +Y    V+TR YR+PE+++G   +  P D+W++GC+  EL SG  L+    
Sbjct: 148 FARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS 207
Query: 326 NLEHLAMMERVLGP-IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
           +++ L ++ + LG  IP+H  ++V     ++    ++  PE     E     LK P    
Sbjct: 208 DVDQLYLIRKTLGDLIPRH--QQVFS-TNQYFSGVKIPDPEDMEPLE-----LKFP---- 255
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               ++ + A   + LL+G L  DP+ RLT    L HP+F
Sbjct: 256 ----NISYPA---LGLLKGCLHMDPTERLTCEQLLHHPYF 288

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 148/345 (42%), Gaps = 63/345 (18%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD- 152
           TSRY+ + +IG G +G V    D  +G  VA+K VR         ++ +  + LL+R + 
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 153 -------RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                  R    C   R   D    + +VFE +   L  +L K      P + ++++ RQ
Sbjct: 63  FEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
            L  + F+H   ++H DLKPENIL  S                              +K+
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTS---------------------------GGTVKL 153
Query: 266 IDFG-STAYEHQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
            DFG +  Y +Q   + +V T  YRAPEV+L   ++ P DMWSVGCI  E+   + LF  
Sbjct: 154 ADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 213
Query: 324 HENLEHLAMMERVLGPIPQHMLKR-VDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
           +   + L  +  ++G  P+    R V  P   F  RG                    PR 
Sbjct: 214 NSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRG--------------------PRP 253
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
              V+  ++ S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 254 VQSVVPEMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 295

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 66/342 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKR 150
           +Y+ + +IGEG +G+V    D +  G  VA+K VR ++   E    + + E+ VL  L+ 
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLET 70
Query: 151 YD-----RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
           ++     R    C   R   D    + +VFE +   L  +L K      P + ++++  Q
Sbjct: 71  FEHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           LL  + F+H  R++H DLKP+NIL  S                           S  IK+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKL 161
Query: 266 IDFG-STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
            DFG +  Y  Q     +V T  YRAPEV+L   ++ P D+WSVGCI  E+   + LF+ 
Sbjct: 162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221
Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP-EGATSRESIKAVLKLPRL 382
             +++ L  +  V+G +P                 G  DWP + A  R++  +    P +
Sbjct: 222 SSDVDQLGKILDVIG-LP-----------------GEEDWPRDVALPRQAFHSKSAQP-I 262
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +  V   +D       DLL   L ++P+ R++A+ AL HP+F
Sbjct: 263 EKFVTD-IDELGK---DLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 66/342 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKR 150
           +Y+ + +IGEG +G+V    D +  G  VA+K VR ++   E    + + E+ VL  L+ 
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLET 70
Query: 151 YD-----RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
           ++     R    C   R   D    + +VFE +   L  +L K      P + ++++  Q
Sbjct: 71  FEHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           LL  + F+H  R++H DLKP+NIL  S                           S  IK+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKL 161
Query: 266 IDFG-STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
            DFG +  Y  Q     +V T  YRAPEV+L   ++ P D+WSVGCI  E+   + LF+ 
Sbjct: 162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221
Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP-EGATSRESIKAVLKLPRL 382
             +++ L  +  V+G +P                 G  DWP + A  R++  +    P +
Sbjct: 222 SSDVDQLGKILDVIG-LP-----------------GEEDWPRDVALPRQAFHSKSAQP-I 262
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +  V   +D       DLL   L ++P+ R++A+ AL HP+F
Sbjct: 263 EKFVTD-IDELGK---DLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 148/345 (42%), Gaps = 63/345 (18%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD- 152
           TSRY+ + +IG G +G V    D  +G  VA+K VR         ++ +  + LL+R + 
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 153 -------RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                  R    C   R   D    + +VFE +   L  +L K      P + ++++ RQ
Sbjct: 63  FEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
            L  + F+H   ++H DLKPENIL  S                              +K+
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTS---------------------------GGTVKL 153
Query: 266 IDFG-STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
            DFG +  Y +Q   + +V T  YRAPEV+L   ++ P DMWSVGCI  E+   + LF  
Sbjct: 154 ADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 213
Query: 324 HENLEHLAMMERVLGPIPQHMLKR-VDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
           +   + L  +  ++G  P+    R V  P   F  RG                    PR 
Sbjct: 214 NSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRG--------------------PRP 253
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
              V+  ++ S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 254 VQSVVPEMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 295

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 66/342 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKR 150
           +Y+ + +IGEG +G+V    D +  G  VA+K VR ++   E    + + E+ VL  L+ 
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLET 70
Query: 151 YD-----RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
           ++     R    C   R   D    + +VFE +   L  +L K      P + ++++  Q
Sbjct: 71  FEHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           LL  + F+H  R++H DLKP+NIL  S                           S  IK+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKL 161
Query: 266 IDFG-STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
            DFG +  Y  Q     +V T  YRAPEV+L   ++ P D+WSVGCI  E+   + LF+ 
Sbjct: 162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221
Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP-EGATSRESIKAVLKLPRL 382
             +++ L  +  V+G +P                 G  DWP + A  R++  +    P +
Sbjct: 222 SSDVDQLGKILDVIG-LP-----------------GEEDWPRDVALPRQAFHSKSAQP-I 262
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +  V   +D       DLL   L ++P+ R++A+ AL HP+F
Sbjct: 263 EKFVTD-IDELGK---DLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 147/345 (42%), Gaps = 63/345 (18%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD- 152
           TSRY+ + +IG G +G V    D  +G  VA+K VR         ++ +  + LL+R + 
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 153 -------RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                  R    C   R   D    + +VFE +   L  +L K      P + ++++ RQ
Sbjct: 63  FEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
            L  + F+H   ++H DLKPENIL  S                              +K+
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTS---------------------------GGTVKL 153
Query: 266 IDFG-STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
            DFG +  Y +Q     +V T  YRAPEV+L   ++ P DMWSVGCI  E+   + LF  
Sbjct: 154 ADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 213
Query: 324 HENLEHLAMMERVLGPIPQHMLKR-VDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
           +   + L  +  ++G  P+    R V  P   F  RG                    PR 
Sbjct: 214 NSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRG--------------------PRP 253
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
              V+  ++ S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 254 VQSVVPEMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 295

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVKS---QKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      + S +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDSEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score =  111 bits (277), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 150/353 (42%), Gaps = 66/353 (18%)
Query: 89  LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE------AAMTEI 142
           LG   TSRY+ + +IG G +G V    D  +G  VA+K VR             + + E+
Sbjct: 3   LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 143 DVLELLKRYD-----RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
            +L  L+ ++     R    C   R   D    + +VFE +   L  +L K      P +
Sbjct: 63  ALLRRLEAFEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
            ++++ RQ L  + F+H   ++H DLKPENIL  S                         
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS------------------------- 155
Query: 258 PKSSAIKVIDFG-STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
                +K+ DFG +  Y +Q     +V T  YRAPEV+L   ++ P DMWSVGCI  E+ 
Sbjct: 156 --GGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKR-VDKPAEKFVRRGRLDWPEGATSRESIK 374
             + LF  +   + L  +  ++G  P+    R V  P   F  RG               
Sbjct: 214 RRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRG--------------- 258
Query: 375 AVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                PR    V+  ++ S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 259 -----PRPVQSVVPEMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 303

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  111 bits (277), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 85  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 133
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      + S +
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDSEL 166
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 167 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 227 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 270
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 271 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 89  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 137
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      + S +
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDSEL 170
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 171 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 231 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 274
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 275 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 72/336 (21%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKV--------VRSIKKYREAA----MTEIDVLELLKR 150
           +G G +G V   +D+ +GE VAIK         + + + YRE      M   +V+ LL  
Sbjct: 50  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           +  + S    +RN++D        F ++ P +   L+K     F  + ++ +  Q+L+ +
Sbjct: 110 FTPASS----LRNFYD--------FYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGL 157
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H   ++H DLKP N+                      VN      +   +K++DFG 
Sbjct: 158 KYIHSAGVVHRDLKPGNLA---------------------VN------EDCELKILDFGL 190
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
             +   E    V TR YRAPEVIL  + ++   D+WSVGCI+ E+ +G+ LF+  + L+ 
Sbjct: 191 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 250
Query: 330 LAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
           L  + +V G P  + + K  DK A+ +                 I+++ + PR      Q
Sbjct: 251 LTQILKVTGVPGTEFVQKLNDKAAKSY-----------------IQSLPQTPRKD--FTQ 291
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               ++    DLL+ +L  D   RLTA  AL HPFF
Sbjct: 292 LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 72/336 (21%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKV--------VRSIKKYREAA----MTEIDVLELLKR 150
           +G G +G V   +D+ +GE VAIK         + + + YRE      M   +V+ LL  
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           +  + S    +RN++D        F ++ P +   L+K     F  + ++ +  Q+L+ +
Sbjct: 92  FTPASS----LRNFYD--------FYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGL 139
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H   ++H DLKP N+                      VN      +   +K++DFG 
Sbjct: 140 KYIHSAGVVHRDLKPGNLA---------------------VN------EDCELKILDFGL 172
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
             +   E    V TR YRAPEVIL  + ++   D+WSVGCI+ E+ +G+ LF+  + L+ 
Sbjct: 173 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 232
Query: 330 LAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
           L  + +V G P  + + K  DK A+ +                 I+++ + PR      Q
Sbjct: 233 LTQILKVTGVPGTEFVQKLNDKAAKSY-----------------IQSLPQTPRKD--FTQ 273
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               ++    DLL+ +L  D   RLTA  AL HPFF
Sbjct: 274 LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 102 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 150
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 151 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 183
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 184 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 244 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 287
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 288 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVKX---QKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDXEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++         D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 89  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 137
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 170
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 171 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 231 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 274
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 275 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 79  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 127
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 160
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 161 KILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 221 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 264
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 265 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  IG G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 28  RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 88  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDXEL 169
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 170 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 230 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 273
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 274 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 79  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 127
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 160
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 161 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 221 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 264
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 265 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 103 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 151
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 184
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 185 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 245 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 288
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 289 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 33  RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 93  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 141
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 142 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 174
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 175 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 234
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 235 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 278
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 279 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 103 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 151
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 184
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 185 KILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 245 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 288
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 289 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 21  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 81  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 129
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 130 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 162
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 163 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 222
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 223 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 266
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 267 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 94  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 142
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 143 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDXEL 175
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 176 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 236 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 279
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 280 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 95  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 143
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 176
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 177 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 237 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 280
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 281 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 95  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 143
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 176
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 177 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 237 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 280
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 281 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 79  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 127
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 160
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 161 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 221 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 264
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 265 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 95  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 143
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 176
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 177 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 237 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 280
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 281 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 80  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 128
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 161
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 162 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 222 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 265
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 266 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 88  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDXEL 169
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 170 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 230 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 273
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 274 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 94  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 142
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 143 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 175
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 176 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 236 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 279
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 280 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 80  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 128
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 161
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 162 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 222 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 265
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 266 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 103 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 151
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 184
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 185 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 245 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 288
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 289 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 85  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 133
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 166
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 167 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 227 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 270
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 271 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 85  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 133
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 166
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 167 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 227 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 270
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 271 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++         D V+ + 
Sbjct: 79  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVKCAKLTD---DHVQFLI 127
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 160
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 161 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 221 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 264
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 265 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 90  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 138
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 171
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 172 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 232 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 275
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 276 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 102 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 150
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 151 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 183
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 184 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 244 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 287
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 288 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 90  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 138
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 171
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 172 KILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 232 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 275
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 276 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 85  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 133
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 166
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 167 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 227 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 270
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 271 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 88  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 169
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 170 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 230 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 273
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 274 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 22  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 82  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 130
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 131 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 163
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 164 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 223
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 224 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 267
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 268 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 106 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 154
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                            + +   +
Sbjct: 155 YQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCEL 187
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 188 KILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 248 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 291
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 292 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 89  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 137
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 170
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 171 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 231 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 274
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 275 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 88  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 169
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 170 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 230 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 273
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 274 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 90  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 138
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 171
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 172 KILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 232 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 275
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 276 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 90  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 138
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 171
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 172 KILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 232 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 275
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 276 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 106 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 154
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 155 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 187
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 188 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 248 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 291
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 292 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 89  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 137
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                            + +   +
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCEL 170
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 171 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 231 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 274
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 275 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D ++G  +A+K        ++ + + YRE      M   +
Sbjct: 52  RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 112 VIGLLDVFTPATS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 160
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 161 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 193
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DFG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 194 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFP 253
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             +++  L  + R+ G  P  ++ R+                    S E+   +  LP++
Sbjct: 254 GTDHINQLQQIMRLTGTPPASVISRM-------------------PSHEARNYINSLPQM 294
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                  V   A  L +DLL+ +L  D   R+TA +AL HP+F++
Sbjct: 295 PKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++D+G   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++DF    +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++ FG   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 159/350 (45%), Gaps = 55/350 (15%)
Query: 87  FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLE 146
           F +  ++   Y+I+  IG G +G V     R TG+ VAIK + +       A   +  L+
Sbjct: 46  FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 147 LLKRYDRSGSRCVQ--IRNWFDYR--NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI 202
           +LK +       ++  +R    Y     + +V +++   L+  +  +  +P  ++ VR  
Sbjct: 106 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYF 163
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT---ARSPTDVNYYKRLPK 259
             QLL  + +MH  ++IH DLKP N+L      LKI D+ +      SP +  Y+     
Sbjct: 164 LYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM---- 219
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGE 318
                      T Y        V+TR YRAPE++L L  ++   D+WSVGCI  E+ +  
Sbjct: 220 -----------TEY--------VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
Query: 319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
            LF     +  L ++  VLG            P+   ++         A   E ++A ++
Sbjct: 261 QLFPGKNYVHQLQLIMMVLG-----------TPSPAVIQ---------AVGAERVRAYIQ 300
Query: 379 -LPRLQNLVMQHVDHSAG-YLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
            LP  Q +  + V   A    + LL  +LR++PS+R++A  AL+HPF  +
Sbjct: 301 SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 159/350 (45%), Gaps = 55/350 (15%)
Query: 87  FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLE 146
           F +  ++   Y+I+  IG G +G V     R TG+ VAIK + +       A   +  L+
Sbjct: 47  FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 147 LLKRYDRSGSRCVQ--IRNWFDYR--NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI 202
           +LK +       ++  +R    Y     + +V +++   L+  +  +  +P  ++ VR  
Sbjct: 107 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYF 164
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT---ARSPTDVNYYKRLPK 259
             QLL  + +MH  ++IH DLKP N+L      LKI D+ +      SP +  Y+     
Sbjct: 165 LYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM---- 220
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGE 318
                      T Y        V+TR YRAPE++L L  ++   D+WSVGCI  E+ +  
Sbjct: 221 -----------TEY--------VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
Query: 319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
            LF     +  L ++  VLG            P+   ++         A   E ++A ++
Sbjct: 262 QLFPGKNYVHQLQLIMMVLG-----------TPSPAVIQ---------AVGAERVRAYIQ 301
Query: 379 -LPRLQNLVMQHVDHSAG-YLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
            LP  Q +  + V   A    + LL  +LR++PS+R++A  AL+HPF  +
Sbjct: 302 SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 84/339 (24%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY--REAAMTEIDVLELL 148
            + RYK  R +G+G+FG+V+ C D+ TG+  A+KV+  R +K+   +E+ + E+   +LL
Sbjct: 48  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV---QLL 104
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           K+ D      +++  +F+ + +  +V E+  G  L+D +     R   VD  R I RQ+L
Sbjct: 105 KQLDH--PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 160
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + +MH  +++H DLKPEN+L  S                          K + I++ID
Sbjct: 161 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 196
Query: 268 FG-STAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           FG ST +E  ++    + T +Y APEV+ G  +   CD+WS G IL  L SG   F    
Sbjct: 197 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 252
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
                       G     +LK+V+K    F      + P+     ES K           
Sbjct: 253 ------------GANEYDILKKVEKGKYTF------ELPQWKKVSESAK----------- 283
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                        DL++ +L Y PS R++A DAL H + 
Sbjct: 284 -------------DLIRKMLTYVPSMRISARDALDHEWI 309

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++D G   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 157/375 (41%), Gaps = 93/375 (24%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE------AAMTEIDV 144
           E  + +Y + + +G G+FG V +  D E+G+  A+K V    +Y+         +  +++
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62
Query: 145 LELLKRYDRSGSRCVQIRNWFDYRN------------------------HICIVFEMLGP 180
           ++L+  +  +G    +     D  N                        ++ ++ E +  
Sbjct: 63  IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD 122
Query: 181 SLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           +L+  L+    + R  P++L+     QL   V F+H L + H D+KP+N+L  S      
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS------ 176
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA--YEHQEHNYIVSTRHYRAPEVILGL 296
                               K + +K+ DFGS       +     + +R YRAPE++LG 
Sbjct: 177 --------------------KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGA 216
Query: 297 GWSYPC-DMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG-PIPQHMLKRVDKPAE- 353
               P  D+WS+GC+  EL  G+ LF    +++ L  + +++G P  + M++      E 
Sbjct: 217 TEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEV 276
Query: 354 KFVRRGRLDW----PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP 409
           +F      DW    PEG  S                            IDLL+ +LRY+P
Sbjct: 277 RFPTLKAKDWRKILPEGTPS--------------------------LAIDLLEQILRYEP 310
Query: 410 SSRLTAHDALKHPFF 424
             R+  ++A+ HPFF
Sbjct: 311 DLRINPYEAMAHPFF 325

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 84/339 (24%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY--REAAMTEIDVLELL 148
            + RYK  R +G+G+FG+V+ C D+ TG+  A+KV+  R +K+   +E+ + E+   +LL
Sbjct: 47  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV---QLL 103
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           K+ D      +++  +F+ + +  +V E+  G  L+D +     R   VD  R I RQ+L
Sbjct: 104 KQLDH--PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 159
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + +MH  +++H DLKPEN+L  S                          K + I++ID
Sbjct: 160 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 195
Query: 268 FG-STAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           FG ST +E  ++    + T +Y APEV+ G  +   CD+WS G IL  L SG   F    
Sbjct: 196 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 251
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
                       G     +LK+V+K    F      + P+     ES K           
Sbjct: 252 ------------GANEYDILKKVEKGKYTF------ELPQWKKVSESAK----------- 282
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                        DL++ +L Y PS R++A DAL H + 
Sbjct: 283 -------------DLIRKMLTYVPSMRISARDALDHEWI 308

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 153/342 (44%), Gaps = 64/342 (18%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV----RSIKK--YREAAMTEIDVLEL 147
             RY+ L  +GEG F  V    D+ T + VAIK +    RS  K      A+ EI +L+ 
Sbjct: 9   AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           L     S    + + + F ++++I +VF+ +   L   ++ N+    P   ++      L
Sbjct: 69  L-----SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSH-IKAYMLMTL 122
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           + + ++H   ++H DLKP N+L      LK+ D+ + A+S                    
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGL-AKS-------------------- 161
Query: 268 FGST--AYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTH 324
           FGS   AY HQ     V TR YRAPE++ G   +    DMW+VGCIL EL          
Sbjct: 162 FGSPNRAYXHQ-----VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 216
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
            +L+ L  +   LG            P E+        WP+      S+   +       
Sbjct: 217 SDLDQLTRIFETLG-----------TPTEE-------QWPDMC----SLPDYVTFKSFPG 254
Query: 385 LVMQHVDHSAGY-LIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
           + + H+  +AG  L+DL+QGL  ++P +R+TA  ALK  +F+
Sbjct: 255 IPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 84/339 (24%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY--REAAMTEIDVLELL 148
            + RYK  R +G+G+FG+V+ C D+ TG+  A+KV+  R +K+   +E+ + E+   +LL
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV---QLL 80
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           K+ D      +++  +F+ + +  +V E+  G  L+D +     R   VD  R I RQ+L
Sbjct: 81  KQLDH--PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 136
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + +MH  +++H DLKPEN+L  S                          K + I++ID
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 172
Query: 268 FG-STAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           FG ST +E  ++    + T +Y APEV+ G  +   CD+WS G IL  L SG   F    
Sbjct: 173 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 228
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
                       G     +LK+V+K    F      + P+     ES K           
Sbjct: 229 ------------GANEYDILKKVEKGKYTF------ELPQWKKVSESAK----------- 259
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                        DL++ +L Y PS R++A DAL H + 
Sbjct: 260 -------------DLIRKMLTYVPSMRISARDALDHEWI 285

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 156/337 (46%), Gaps = 39/337 (11%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLK 149
           N++S +++   +GEG +G V     + TGE VAIK +    K  +    + EI +L+  K
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +      +Q  + F+  N + I+ E++   L+   R  + +    D ++    Q L  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           V  +H   +IH DLKP N+L  S   LK+ D+ + AR   +       P      +++F 
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL-ARIIDESAADNSEPTGQQSGMVEF- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
                       V+TR YRAPEV+L    +S   D+WS GCIL EL     +F   +   
Sbjct: 183 ------------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 329 HLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
            L ++  ++G P   + L+ ++ P                 +RE IK++   P      M
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESP----------------RAREYIKSLPMYPAAPLEKM 274
Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               +  G  IDLLQ +L +DP+ R+TA +AL+HP+ 
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 145/334 (43%), Gaps = 51/334 (15%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +Y  L KIGEGT+G V        GET A+K +R  K+      T I  + +LK    S 
Sbjct: 3   KYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              V++ +    +  + +VFE L   L   L         V   +    QLL  +A+ HD
Sbjct: 62  --IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT-AKSFLLQLLNGIAYCHD 118
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
            R++H DLKP+N+L      LKI D+               L ++  I V       Y H
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFG--------------LARAFGIPV-----RKYTH 159
Query: 276 QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
           +     V T  YRAP+V++G   +S   D+WSVGCI  E+ +G  LF      + L  + 
Sbjct: 160 E-----VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIF 214
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE-GATSRESIKAVLKLPRLQNLVMQHVDHS 393
           R+LG            P  K       +WP      +      +  P      ++ +D S
Sbjct: 215 RILG-----------TPNSK-------NWPNVTELPKYDPNFTVYEPLPWESFLKGLDES 256
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
               IDLL  +L+ DP+ R+TA  AL+H +F  +
Sbjct: 257 G---IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 145/334 (43%), Gaps = 51/334 (15%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +Y  L KIGEGT+G V        GET A+K +R  K+      T I  + +LK    S 
Sbjct: 3   KYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              V++ +    +  + +VFE L   L   L         V   +    QLL  +A+ HD
Sbjct: 62  --IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT-AKSFLLQLLNGIAYCHD 118
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
            R++H DLKP+N+L      LKI D+               L ++  I V       Y H
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFG--------------LARAFGIPV-----RKYTH 159
Query: 276 QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
           +     V T  YRAP+V++G   +S   D+WSVGCI  E+ +G  LF      + L  + 
Sbjct: 160 E-----VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF 214
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE-GATSRESIKAVLKLPRLQNLVMQHVDHS 393
           R+LG            P  K       +WP      +      +  P      ++ +D S
Sbjct: 215 RILG-----------TPNSK-------NWPNVTELPKYDPNFTVYEPLPWESFLKGLDES 256
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
               IDLL  +L+ DP+ R+TA  AL+H +F  +
Sbjct: 257 G---IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++D G   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  105 bits (261), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
           RY+ L  +G G +G V    D +TG  VA+K        ++ + + YRE      M   +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           V+ LL  +  + S         +  N + +V  ++G  L + ++    +    D V+ + 
Sbjct: 83  VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  + ++H   +IH DLKP N+                      VN      +   +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
           K++D G   +   E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL +G  LF 
Sbjct: 165 KILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++++ L ++ R++G     +LK++                   ++R  I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 +V   A  L +DLL+ +L  D   R+TA  AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 154/337 (45%), Gaps = 39/337 (11%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLK 149
           N++S +++   +GEG +G V     + TGE VAIK +    K  +    + EI +L+  K
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +      +Q  + F+  N + I+ E++   L+   R  + +    D ++    Q L  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           V  +H   +IH DLKP N+L  S   LK+ D+ +            R+   SA    D  
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA-----------RIIDESAA---DNS 170
Query: 270 STAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
               +       V+TR YRAPEV+L    +S   D+WS GCIL EL     +F   +   
Sbjct: 171 EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 329 HLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
            L ++  ++G P   + L+ ++ P                 +RE IK++   P      M
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESP----------------RAREYIKSLPMYPAAPLEKM 274
Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               +  G  IDLLQ +L +DP+ R+TA +AL+HP+ 
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score =  104 bits (260), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 73/353 (20%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRY 151
            +Y+ L  +GEG++G V+ C +++TG  VAIK        K  ++ AM EI +L+ L+  
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 152 DRSG--SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL----VREIGRQ 205
           +       C + + W+       +VFE +  ++ D     +   FP  L    V++   Q
Sbjct: 85  NLVNLLEVCKKKKRWY-------LVFEFVDHTILD-----DLELFPNGLDYQVVQKYLFQ 132
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           ++  + F H   +IH D+KPENIL                           + +S  +K+
Sbjct: 133 IINGIGFCHSHNIIHRDIKPENIL---------------------------VSQSGVVKL 165
Query: 266 IDFG---STAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALF 321
            DFG   + A   + ++  V+TR YRAPE+++G + +    D+W++GC++ E+  GE LF
Sbjct: 166 CDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF 225
Query: 322 QTHENLEHLAMMERVLGP-IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
               +++ L  +   LG  IP+H       P    VR      PE    RE ++   + P
Sbjct: 226 PGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR-----LPE-IKEREPLER--RYP 277
Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD-YYRRF 432
           +L  +V           IDL +  L  DP  R    + L H FF  D +  RF
Sbjct: 278 KLSEVV-----------IDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERF 319

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score =  104 bits (260), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 145/334 (43%), Gaps = 51/334 (15%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +Y  L KIGEGT+G V        GET A+K +R  K+      T I  + +LK    S 
Sbjct: 3   KYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              V++ +    +  + +VFE L   L   L         V   +    QLL  +A+ HD
Sbjct: 62  --IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT-AKSFLLQLLNGIAYCHD 118
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
            R++H DLKP+N+L      LKI D+               L ++  I V       Y H
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFG--------------LARAFGIPV-----RKYTH 159
Query: 276 QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
           +     + T  YRAP+V++G   +S   D+WSVGCI  E+ +G  LF      + L  + 
Sbjct: 160 E-----IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF 214
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE-GATSRESIKAVLKLPRLQNLVMQHVDHS 393
           R+LG            P  K       +WP      +      +  P      ++ +D S
Sbjct: 215 RILG-----------TPNSK-------NWPNVTELPKYDPNFTVYEPLPWESFLKGLDES 256
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
               IDLL  +L+ DP+ R+TA  AL+H +F  +
Sbjct: 257 G---IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score =  104 bits (260), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 45/341 (13%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLKR 150
            S+Y+ L KIG+GTFG+V     R+TG+ VA+K V      + +   A+ EI +L+LLK 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 151 YDRSG--SRC-VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
            +       C  +   +   +  I +VF+     L   L  N    F +  ++ + + LL
Sbjct: 77  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLL 135
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++H  +++H D+K  N+L      LK+ D+ +                    +   
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-------------------RAFS 176
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
               +  ++  N +V T  YR PE++LG   +  P D+W  GCI+ E+ +   + Q +  
Sbjct: 177 LAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 235
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
              LA++ ++ G I   +   VD    +   +  L   +    ++ +KA ++ P      
Sbjct: 236 QHQLALISQLCGSITPEVWPNVDN--YELYEKLELVKGQKRKVKDRLKAYVRDP------ 287
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    Y +DL+  LL  DP+ R+ + DAL H FF  D
Sbjct: 288 ---------YALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 154/337 (45%), Gaps = 39/337 (11%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLK 149
           N++S +++   +GEG +G V     + TGE VAIK +    K  +    + EI +L+  K
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +      +Q  + F+  N + I+ E++   L+   R  + +    D ++    Q L  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           V  +H   +IH DLKP N+L  S   LK+ D+ +            R+   SA    D  
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA-----------RIIDESAA---DNS 170
Query: 270 STAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
               +       V+TR YRAPEV+L    +S   D+WS GCIL EL     +F   +   
Sbjct: 171 EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 329 HLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
            L ++  ++G P   + L+ ++ P                 +RE IK++   P      M
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESP----------------RAREYIKSLPMYPAAPLEKM 274
Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               +  G  IDLLQ +L +DP+ R+TA +AL+HP+ 
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 84/339 (24%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY--REAAMTEIDVLELL 148
            + RYK  R +G+G+FG+V+ C D+ TG+  A+KV+  R +K+   +E+ + E+   +LL
Sbjct: 30  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV---QLL 86
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           K+ D      +++  +F+ + +  +V E+  G  L+D +     R   VD  R I RQ+L
Sbjct: 87  KQLDHPN--IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 142
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + +MH  +++H DLKPEN+L  S                          K + I++ID
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 178
Query: 268 FG-STAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           FG ST +E  ++    + T +Y APEV+ G  +   CD+WS G IL  L SG   F    
Sbjct: 179 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 234
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
                       G     +LK+V+K    F      + P+     ES K           
Sbjct: 235 ------------GANEYDILKKVEKGKYTF------ELPQWKKVSESAK----------- 265
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                        DL++ +L Y PS R++A DAL H + 
Sbjct: 266 -------------DLIRKMLTYVPSMRISARDALDHEWI 291

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 154/354 (43%), Gaps = 82/354 (23%)
Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
           GE     Y   + IG G+FG V      E+ E VAIK V   K+++     E+ ++ ++K
Sbjct: 35  GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKN---RELQIMRIVK 90
Query: 150 RYDRSGSRCVQIRNWF----DYRNHICI--VFEMLGPSLYDFLR--KNNYRPFPVDLVRE 201
                    V ++ +F    D ++ + +  V E +  ++Y   R      +  P+ L++ 
Sbjct: 91  H-----PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKL 145
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
              QLL  +A++H + + H D+KP+N+L   P                          S 
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQNLLLDPP--------------------------SG 179
Query: 262 AIKVIDFGSTAY--EHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGE 318
            +K+IDFGS       + +   + +R+YRAPE+I G   ++   D+WS GC++ EL  G+
Sbjct: 180 VLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
Query: 319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL- 377
            LF     ++ L  + +VL                            G  SRE IK +  
Sbjct: 240 PLFPGESGIDQLVEIIKVL----------------------------GTPSREQIKTMNP 271
Query: 378 -----KLPRLQNLVMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                K P+++      V    +    IDL+  LL Y PS+RLTA +AL HPFF
Sbjct: 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 151/334 (45%), Gaps = 55/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKK--YREAAMTEIDVLELLKRYDR 153
           Y+ L+ +G G +G V   +D  TG  VAIK + R  +   + + A  E+ +L+ ++  + 
Sbjct: 27  YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 154 SGSRCVQIRN-WFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
            G   V   +   D      +V   +G  L   ++   +     D ++ +  Q+L+ + +
Sbjct: 87  IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRY 143
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H   +IH DLKP N+                      VN      +   +K++DFG   
Sbjct: 144 IHAAGIIHRDLKPGNLA---------------------VN------EDCELKILDFGLAR 176
Query: 273 YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
               E    V TR YRAPEVIL  + ++   D+WSVGCI+ E+ +G+ LF+  ++L+ L 
Sbjct: 177 QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK 236
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
            + +V G  P   ++R+     K   +G                   LP L+      + 
Sbjct: 237 EIMKVTGTPPAEFVQRLQSDEAKNYMKG-------------------LPELEKKDFASIL 277
Query: 392 HSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFF 424
            +A  L ++LL+ +L  D   R+TA +AL HP+F
Sbjct: 278 TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 45/341 (13%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLKR 150
            S+Y+ L KIG+GTFG+V     R+TG+ VA+K V      + +   A+ EI +L+LLK 
Sbjct: 16  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 151 YDRSG--SRC-VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
            +       C  +   +   +  I +VF+     L   L  N    F +  ++ + + LL
Sbjct: 76  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLL 134
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++H  +++H D+K  N+L      LK+ D+ +                    +   
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-------------------RAFS 175
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
               +  ++  N +V T  YR PE++LG   +  P D+W  GCI+ E+ +   + Q +  
Sbjct: 176 LAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 234
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
              LA++ ++ G I   +   VD    +   +  L   +    ++ +KA ++ P      
Sbjct: 235 QHQLALISQLCGSITPEVWPNVDN--YELYEKLELVKGQKRKVKDRLKAYVRDP------ 286
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    Y +DL+  LL  DP+ R+ + DAL H FF  D
Sbjct: 287 ---------YALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 318

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLKR 150
            S+Y+ L KIG+GTFG+V     R+TG+ VA+K V      + +   A+ EI +L+LLK 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 151 YDRSG--SRC-VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
            +       C  +   +   +  I +VF+     L   L  N    F +  ++ + + LL
Sbjct: 77  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLL 135
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++H  +++H D+K  N+L      LK+ D+ + AR+                    
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL-ARA-------------------- 174
Query: 268 FGSTAYEHQEHNYI--VSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTH 324
             S A   Q + Y   V T  YR PE++LG   +  P D+W  GCI+ E+ +   + Q +
Sbjct: 175 -FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
                LA++ ++ G I   +   VD    +   +  L   +    ++ +KA ++ P    
Sbjct: 234 TEQHQLALISQLCGSITPEVWPNVDN--YELYEKLELVKGQKRKVKDRLKAYVRDP---- 287
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                      Y +DL+  LL  DP+ R+ + DAL H FF  D
Sbjct: 288 -----------YALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 149/335 (44%), Gaps = 55/335 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYD 152
           +Y+ L KIGEGT+G V    +RET E VA+K VR     +    +A+ EI +L+ LK   
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-- 60
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                 V++ +       + +VFE     L  +    N    P ++V+    QLL+ + F
Sbjct: 61  ---KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGF 116
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H   ++H DLKP+N+L      LK+ ++               L ++  I V  + +  
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFG--------------LARAFGIPVRCYSAE- 161
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
                    V T  YR P+V+ G   +S   DMWS GCI  EL  +G  LF  ++  + L
Sbjct: 162 ---------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + R+LG            P E+        WP   T     K     P   +LV   V
Sbjct: 213 KRIFRLLG-----------TPTEE-------QWP-SMTKLPDYKPYPMYPATTSLV-NVV 252
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                   DLLQ LL+ +P  R++A +AL+HP+F+
Sbjct: 253 PKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLKR 150
            S+Y+ L KIG+GTFG+V     R+TG+ VA+K V      + +   A+ EI +L+LLK 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 151 YDRSG--SRC-VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
            +       C  +   +   +  I +VF+     L   L  N    F +  ++ + + LL
Sbjct: 77  ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLL 135
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++H  +++H D+K  N+L      LK+ D+ + AR+                    
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL-ARA-------------------- 174
Query: 268 FGSTAYEHQEHNYI--VSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTH 324
             S A   Q + Y   V T  YR PE++LG   +  P D+W  GCI+ E+ +   + Q +
Sbjct: 175 -FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
                LA++ ++ G I   +   VD    +   +  L   +    ++ +KA ++ P    
Sbjct: 234 TEQHQLALISQLCGSITPEVWPNVDN--YELYEKLELVKGQKRKVKDRLKAYVRDP---- 287
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                      Y +DL+  LL  DP+ R+ + DAL H FF  D
Sbjct: 288 -----------YALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 159/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK       EI +LE L    R G 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--NKIKREIKILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +     R +   G  SR+      +  R  +   QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIEL--DPRFNDILGRHSRK------RWERFVHSENQHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score =  102 bits (255), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 148/335 (44%), Gaps = 55/335 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYD 152
           +Y+ L KIGEGT+G V    +RET E VA+K VR     +    +A+ EI +L+ LK   
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-- 60
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                 V++ +       + +VFE     L  +    N    P ++V+    QLL+ + F
Sbjct: 61  ---KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGF 116
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H   ++H DLKP+N+L      LK+ D+               L ++  I V  + +  
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFG--------------LARAFGIPVRCYSAE- 161
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
                    V T  YR P+V+ G   +S   DMWS GCI  EL  +   LF  ++  + L
Sbjct: 162 ---------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQL 212
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + R+LG            P E+        WP   T     K     P   +LV   V
Sbjct: 213 KRIFRLLG-----------TPTEE-------QWP-SMTKLPDYKPYPMYPATTSLV-NVV 252
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                   DLLQ LL+ +P  R++A +AL+HP+F+
Sbjct: 253 PKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 151/345 (43%), Gaps = 68/345 (19%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
           + L  +Y+ L K+GEGT+G V    D + G  VA+K +R   +      T I  + LLK 
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                   V + +       + +VFE +   L   L +N         ++    QLL  V
Sbjct: 76  LHHPN--IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGV 132
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
           A  H  R++H DLKP+N+L  S   LK+ D+               L ++  I V     
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFG--------------LARAFGIPV----- 173
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
            +Y H+     V T  YRAP+V++G   +S   D+WS+GCI  E+ +G+ LF    + + 
Sbjct: 174 RSYTHE-----VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
Query: 330 LAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
           L  +  +LG P P+                   +WP+          V +LP  +    Q
Sbjct: 229 LPKIFSILGTPNPR-------------------EWPQ----------VQELPLWKQRTFQ 259
Query: 389 HVDHS------AGYL---IDLLQGLLRYDPSSRLTAHDALKHPFF 424
             +         G+    IDLL  +L +DP+ R++A DA+ HP+F
Sbjct: 260 VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 151/345 (43%), Gaps = 68/345 (19%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
           + L  +Y+ L K+GEGT+G V    D + G  VA+K +R   +      T I  + LLK 
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                   V + +       + +VFE +   L   L +N         ++    QLL  V
Sbjct: 76  LHHPN--IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGV 132
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
           A  H  R++H DLKP+N+L  S   LK+ D+               L ++  I V     
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFG--------------LARAFGIPV----- 173
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
            +Y H+     V T  YRAP+V++G   +S   D+WS+GCI  E+ +G+ LF    + + 
Sbjct: 174 RSYTHE-----VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
Query: 330 LAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
           L  +  +LG P P+                   +WP+          V +LP  +    Q
Sbjct: 229 LPKIFSILGTPNPR-------------------EWPQ----------VQELPLWKQRTFQ 259
Query: 389 HVDHS------AGYL---IDLLQGLLRYDPSSRLTAHDALKHPFF 424
             +         G+    IDLL  +L +DP+ R++A DA+ HP+F
Sbjct: 260 VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score =  101 bits (252), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 48/329 (14%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y  L K+GEGT+  V     + T   VA+K +R ++    A  T I  + LLK  D   +
Sbjct: 4   YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIR-LEHEEGAPCTAIREVSLLK--DLKHA 60
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V + +       + +VFE L   L  +L  +      +  V+    QLL  +A+ H  
Sbjct: 61  NIVTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           +++H DLKP+N+L      LK+ D+ + AR+       K +P           +  Y+++
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGL-ARA-------KSIP-----------TKTYDNE 160
Query: 277 EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
                V T  YR P+++LG   +S   DMW VGCI  E+ +G  LF      E L  + R
Sbjct: 161 -----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR 215
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG 395
           +LG            P E+        WP G  S E  K           ++ H      
Sbjct: 216 ILG-----------TPTEE-------TWP-GILSNEEFKTYNYPKYRAEALLSHAPRLDS 256
Query: 396 YLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
              DLL  LL+++  +R++A DA+KHPFF
Sbjct: 257 DGADLLTKLLQFEGRNRISAEDAMKHPFF 285

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 153/339 (45%), Gaps = 84/339 (24%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY--REAAMTEIDVLELL 148
            + RYK  R +G+G+FG+V+ C D+ TG+  A+KV+  R +K+   +E+ + E+   +LL
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV---QLL 80
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           K+ D       ++  +F+ + +  +V E+  G  L+D +     R   VD  R I RQ+L
Sbjct: 81  KQLDH--PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 136
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + + H  +++H DLKPEN+L  S                          K + I++ID
Sbjct: 137 SGITYXHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 172
Query: 268 FG-STAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           FG ST +E  ++    + T +Y APEV+ G  +   CD+WS G IL  L SG   F    
Sbjct: 173 FGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 228
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
                       G     +LK+V+K    F      + P+     ES K           
Sbjct: 229 ------------GANEYDILKKVEKGKYTF------ELPQWKKVSESAK----------- 259
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                        DL++  L Y PS R++A DAL H + 
Sbjct: 260 -------------DLIRKXLTYVPSXRISARDALDHEWI 285

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 145/346 (41%), Gaps = 57/346 (16%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLK 149
           ++  RY  L+ IGEG +G V    D      VAIK +     + Y +  + EI +L   +
Sbjct: 40  DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +  G R +   +  +    + IV +++   LY  L+         D +     Q+L  
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ---LSNDHICYFLYQILRG 156
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   ++H DLKP N+L  +                           +  +K+ DFG
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINT---------------------------TCDLKICDFG 189
Query: 270 STAYEHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ 322
                  EH++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F 
Sbjct: 190 LARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
               L+ L  +  +LG   Q  L  +       +     ++ +   S+  +      P+ 
Sbjct: 250 GKHYLDQLNHILGILGSPSQEDLNCI-------INMKARNYLQSLPSKTKVAWAKLFPK- 301
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                     S    +DLL  +L ++P+ R+T  +AL HP+  + Y
Sbjct: 302 ----------SDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYY 337

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 141/338 (41%), Gaps = 77/338 (22%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
               RY I+  +G+G+FG+VL C DR T +  A+KV+       +   T +  +ELLK+ 
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           D      +++    +  +   IV E+  G  L+D + K   + F       I +Q+   +
Sbjct: 79  DHPN--IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGI 134
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
            +MH   ++H DLKPENIL  S E                        K   IK+IDFG 
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGL 170
Query: 270 STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           ST ++   +    + T +Y APEV+ G  +   CD+WS G IL  L SG   F       
Sbjct: 171 STCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF------- 222
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
                    G     +LKRV+     F      D P+  T  +  K              
Sbjct: 223 --------YGKNEYDILKRVETGKYAF------DLPQWRTISDDAK-------------- 254
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                     DL++ +L + PS R+TA   L+HP+  +
Sbjct: 255 ----------DLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 141/338 (41%), Gaps = 77/338 (22%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
               RY I+  +G+G+FG+VL C DR T +  A+KV+       +   T +  +ELLK+ 
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           D      +++    +  +   IV E+  G  L+D + K   + F       I +Q+   +
Sbjct: 79  DHPN--IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGI 134
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
            +MH   ++H DLKPENIL  S E                        K   IK+IDFG 
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGL 170
Query: 270 STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           ST ++   +    + T +Y APEV+ G  +   CD+WS G IL  L SG   F       
Sbjct: 171 STCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF------- 222
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
                    G     +LKRV+     F      D P+  T  +  K              
Sbjct: 223 --------YGKNEYDILKRVETGKYAF------DLPQWRTISDDAK-------------- 254
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                     DL++ +L + PS R+TA   L+HP+  +
Sbjct: 255 ----------DLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 141/338 (41%), Gaps = 77/338 (22%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
               RY I+  +G+G+FG+VL C DR T +  A+KV+       +   T +  +ELLK+ 
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           D      +++    +  +   IV E+  G  L+D + K   + F       I +Q+   +
Sbjct: 79  DHPN--IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGI 134
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
            +MH   ++H DLKPENIL  S E                        K   IK+IDFG 
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGL 170
Query: 270 STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           ST ++   +    + T +Y APEV+ G  +   CD+WS G IL  L SG   F       
Sbjct: 171 STCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF------- 222
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
                    G     +LKRV+     F      D P+  T  +  K              
Sbjct: 223 --------YGKNEYDILKRVETGKYAF------DLPQWRTISDDAK-------------- 254
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                     DL++ +L + PS R+TA   L+HP+  +
Sbjct: 255 ----------DLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 152/340 (44%), Gaps = 53/340 (15%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           RY+ + K+GEGT+G+V   +D  T ETVAIK +R   +      T I  + LLK      
Sbjct: 35  RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              +++++   + + + ++FE     L  ++ KN      + +++    QL+  V F H 
Sbjct: 95  --IIELKSVIHHNHRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHS 150
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG---STA 272
            R +H DLKP+N+L             V+  S T V           +K+ DFG   +  
Sbjct: 151 RRCLHRDLKPQNLLL-----------SVSDASETPV-----------LKIGDFGLARAFG 188
Query: 273 YEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
              ++  + + T  YR PE++LG   +S   D+WS+ CI  E+     LF     ++ L 
Sbjct: 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV- 390
            +  VLG +P                     WP G T+    K     P+ +   ++ V 
Sbjct: 249 KIFEVLG-LPDDT-----------------TWP-GVTALPDWKQ--SFPKFRGKTLKRVL 287
Query: 391 -DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY 429
                   +DLL  +L  DP  R++A +AL+HP+F+ + +
Sbjct: 288 GALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF 327

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 152/349 (43%), Gaps = 85/349 (24%)
Query: 83  GHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAM 139
           G ++ +   +L+  Y+ ++K+G G +G+VL C D+ T    AIK++R            +
Sbjct: 25  GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84
Query: 140 TEIDVLELLKRYDRSGSRCVQIRNWF-DYRNHICIVFEMLGPSLYD-FLRKNNYRPFPVD 197
            E+ VL+LL          +++ ++F D RN+  ++    G  L+D  + +  +      
Sbjct: 85  EEVAVLKLLDH-----PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAA 139
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
           +   I +Q+L  V ++H   ++H DLKPEN+L  S E                       
Sbjct: 140 V---IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE----------------------- 173
Query: 258 PKSSAIKVIDFG-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
            K + IK++DFG S  +E+Q+     + T +Y APEV L   +   CD+WS+G IL  L 
Sbjct: 174 -KDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILL 231
Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA 375
           +G   F                G   Q +L++V+K    F      D PE     E  K 
Sbjct: 232 AGYPPFG---------------GQTDQEILRKVEKGKYTF------DSPEWKNVSEGAK- 269
Query: 376 VLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                                  DL++ +L++D   R++A  AL+HP+ 
Sbjct: 270 -----------------------DLIKQMLQFDSQRRISAQQALEHPWI 295

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 156/348 (44%), Gaps = 72/348 (20%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           R+++ R  G+GTFG V    ++ TG +VAIK V    ++R   +  +  L +L       
Sbjct: 24  RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH----- 78
Query: 156 SRCVQIRNWF------DYRN-HICIVFEMLGPSLYDFLRKNNYR----PFPVDLVREIGR 204
              VQ++++F      D R+ ++ +V E +  +L+   R N YR    P P+ L++    
Sbjct: 79  PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCR-NYYRRQVAPPPI-LIKVFLF 136
Query: 205 QLLECVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
           QL+  +  +H   + + H D+KP N+L    +                            
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD--------------------------GT 170
Query: 263 IKVIDFGST-AYEHQEHNYI-VSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEA 319
           +K+ DFGS       E N   + +R+YRAPE+I G   ++   D+WSVGCI  E+  GE 
Sbjct: 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKP---AEKFVRRGRLDWPEGATSRESIKAV 376
           +F+   +   L  + RVLG   + +L++++      + +  +G + W             
Sbjct: 231 IFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKG-IPW------------- 276
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  N+   H    A    DLL  LL+Y P  R+  ++AL HP+F
Sbjct: 277 ------SNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 146/318 (45%), Gaps = 76/318 (23%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           + +GEG+F     C+ +++ +  A+K++   K+       EI  L+L + +       V+
Sbjct: 17  KPLGEGSFSICRKCVHKKSNQAFAVKIIS--KRMEANTQKEITALKLCEGH----PNIVK 70
Query: 161 IRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
           +   F  + H  +V E+L G  L++ ++K  +  F       I R+L+  V+ MHD+ ++
Sbjct: 71  LHEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVV 128
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
           H DLKPEN+LF                  TD N       +  IK+IDFG    +  ++ 
Sbjct: 129 HRDLKPENLLF------------------TDEN------DNLEIKIIDFGFARLKPPDNQ 164
Query: 280 YIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE-NLEHLAMMER 335
            + +   T HY APE++   G+   CD+WS+G IL  + SG+  FQ+H+ +L   + +E 
Sbjct: 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE- 223
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG 395
                   ++K++ K    F         EG    E+ K V +  +              
Sbjct: 224 --------IMKKIKKGDFSF---------EG----EAWKNVSQEAK-------------- 248
Query: 396 YLIDLLQGLLRYDPSSRL 413
              DL+QGLL  DP+ RL
Sbjct: 249 ---DLIQGLLTVDPNKRL 263

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 144/346 (41%), Gaps = 65/346 (18%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 26  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 86  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 142
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +S +K+ DFG    
Sbjct: 143 HSANVLHRDLKPSNLL---------------------------LNTTSDLKICDFGLARV 175
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ--- 383
           L+ L            H+L  +  P+++ +  G         + ++   +L LP      
Sbjct: 236 LDQL-----------NHILGILGSPSQEDLNCG--------INLKARNYLLSLPHKNKVP 276
Query: 384 -NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            N +  + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 277 WNRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLAQYY 319

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 94.7 bits (234), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 143/340 (42%), Gaps = 45/340 (13%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLK 149
           ++  RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +
Sbjct: 40  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +  G   +      +    + +V  ++G  LY  L+  +      D +     Q+L  
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRG 156
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   ++H DLKP N+L  +   LKI D+ +   +  D ++   L            
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL------------ 204
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
            T Y        V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     L+
Sbjct: 205 -TEY--------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 255
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
            L  +  +LG   Q  L  +        R   L  P             K+P   N +  
Sbjct: 256 QLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFP 300
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
           + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 301 NADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 337

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 94.7 bits (234), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 65/342 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMT--EIDVLELLKRYD 152
           R + LR +G G +G V    D    + VA+K + R  +    A  T  E+ +L+ LK  +
Sbjct: 29  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 153 RSG-----SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
             G     +    I ++    + + +V  ++G  L + ++    +    + V+ +  QLL
Sbjct: 89  VIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVKS---QALSDEHVQFLVYQLL 141
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++H   +IH DLKP N+                      VN      + S ++++D
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVA---------------------VN------EDSELRILD 174
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           FG      +E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL  G+ALF   + 
Sbjct: 175 FGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
Query: 327 LEHLA-MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
           ++ L  +ME V  P P+ + K   + A  +++                     LP +   
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--------------------SLPPMPQK 274
Query: 386 VMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
            +  +   A  L IDLL  +L  D   R++A +AL H +F++
Sbjct: 275 DLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L  +   LKI D+ +   +  D ++   L             T Y
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFL-------------TEY 187
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                   V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     L+ L  
Sbjct: 188 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 239
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
           +  +LG   Q  L  +        R   L  P             K+P   N +  + D 
Sbjct: 240 ILGILGSPSQEDLNXI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 284
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 285 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 56  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 108
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 109 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 201
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 202 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 262 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 299
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 300 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 58  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 110
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 111 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 203
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 204 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 263
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 264 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 301
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 302 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 342

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 147/342 (42%), Gaps = 82/342 (23%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV-RSIKKYREAAMTEIDVLELLK 149
           + L+ RY+ ++K+G G +G+VL C D+ TG   AIK++ +S       +   +D + +LK
Sbjct: 17  QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 150 RYDRSGSRCVQIRNWF-DYRNHICIVFEMLGPSLYD--FLRKNNYRPFPVDLVREIGRQL 206
           + D      +++  +F D RN+  ++    G  L+D   LR+     F       I +Q+
Sbjct: 77  QLDHPN--IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK----FSEVDAAVIMKQV 130
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L    ++H   ++H DLKPEN+L  S                          + + IK++
Sbjct: 131 LSGTTYLHKHNIVHRDLKPENLLLESK------------------------SRDALIKIV 166
Query: 267 DFGSTAYEH--QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           DFG +A+     +    + T +Y APEV L   +   CD+WS G IL  L  G   F   
Sbjct: 167 DFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG-- 223
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
                        G   Q +LKRV+K    F      D P+     +  K ++KL     
Sbjct: 224 -------------GQTDQEILKRVEKGKFSF------DPPDWTQVSDEAKQLVKL----- 259
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                              +L Y+PS R++A +AL HP+  +
Sbjct: 260 -------------------MLTYEPSKRISAEEALNHPWIVK 282

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 60  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 112
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 113 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 205
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 206 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 265
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 266 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 303
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 304 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 344

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 56  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 108
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 109 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 201
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 202 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 262 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 299
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 300 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 153
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 154 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 246
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 247 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 306
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 307 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 344
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 345 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 385

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L  +   LKI D+ +   +  D ++   L             T Y
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL-------------TEY 187
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                   V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     L+ L  
Sbjct: 188 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 239
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
           +  +LG   Q  L  +        R   L  P             K+P   N +  + D 
Sbjct: 240 ILGILGSPSQEDLNXI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 284
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 285 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 50  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 102
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 103 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 195
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 196 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 255
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 256 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 293
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 294 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 334

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 65/342 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMT--EIDVLELLKRYD 152
           R + LR +G G +G V    D    + VA+K + R  +    A  T  E+ +L+ LK  +
Sbjct: 29  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 153 RSG-----SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
             G     +    I ++    + + +V  ++G  L + ++    +    + V+ +  QLL
Sbjct: 89  VIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVK---CQALSDEHVQFLVYQLL 141
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++H   +IH DLKP N+                      VN      + S ++++D
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVA---------------------VN------EDSELRILD 174
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           FG      +E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL  G+ALF   + 
Sbjct: 175 FGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
Query: 327 LEHLA-MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
           ++ L  +ME V  P P+ + K   + A  +++                     LP +   
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--------------------SLPPMPQK 274
Query: 386 VMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
            +  +   A  L IDLL  +L  D   R++A +AL H +F++
Sbjct: 275 DLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L  +   LKI D+ +   +  D ++   L             T Y
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL-------------TEY 191
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                   V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     L+ L  
Sbjct: 192 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 243
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
           +  +LG   Q  L  +        R   L  P             K+P   N +  + D 
Sbjct: 244 ILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 288
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 289 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 158/366 (43%), Gaps = 63/366 (17%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + ++    +++ LL  +    S         +    + IV E++  +
Sbjct: 63  NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 115 LSQVIQME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T                  F  T Y        V TR+YRAPEVILG+G+   
Sbjct: 171 GLARTAGTS-----------------FMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+  G  LF   ++++    ++E++  P P+ M     K  +  VR   
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-----KKLQPTVRTYV 260
Query: 361 LDWPEGAT-SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
            + P+ A  S E +   +  P       +H    A    DLL  +L  D S R++  +AL
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 420 KHPFFT 425
           +HP+  
Sbjct: 317 QHPYIN 322

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 27  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 79
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 80  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 172
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 173 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 232
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 233 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 270
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 271 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 311

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 82/341 (24%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLK 149
            L+ RY+ ++K+G G +G+VL C D+ TG   AIK+++  S+     +    +D + +LK
Sbjct: 1   GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGAL-LDEVAVLK 59
Query: 150 RYDRSGSRCVQIRNWF-DYRNHICIVFEMLGPSLYD-FLRKNNYRPFPVDLVREIGRQLL 207
           + D      +++  +F D RN+  ++    G  L+D  + +  +      +   I +Q+L
Sbjct: 60  QLDH--PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVL 114
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
               ++H   ++H DLKPEN+L  S                          + + IK++D
Sbjct: 115 SGTTYLHKHNIVHRDLKPENLLLESK------------------------SRDALIKIVD 150
Query: 268 FGSTAYEH--QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           FG +A+     +    + T +Y APEV L   +   CD+WS G IL  L  G   F    
Sbjct: 151 FGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG--- 206
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
                       G   Q +LKRV+K    F      D P+     +  K ++KL      
Sbjct: 207 ------------GQTDQEILKRVEKGKFSF------DPPDWTQVSDEAKQLVKL------ 242
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                             +L Y+PS R++A +AL HP+  +
Sbjct: 243 ------------------MLTYEPSKRISAEEALNHPWIVK 265

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 148/342 (43%), Gaps = 56/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           RY+ L+ IG G  G V    D      VAIK +    + +  A      L L+K  +   
Sbjct: 25  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 156 SRCVQIRNWFDYR------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
              + + N F  +        + +V E++  +L   ++         + +  +  Q+L  
Sbjct: 85  --IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLXG 138
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +  +H   +IH DLKP NI+  S   LKI D+ +   + T                  F 
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-----------------SFM 181
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
            T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++ 
Sbjct: 182 MTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 330 L-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL--QNLV 386
              ++E++  P P+ M     K  +  VR    + P+ A         L  P+L   +L 
Sbjct: 234 WNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKLFPDSLF 280
Query: 387 MQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
               +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 281 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 41  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 93
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 94  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 186
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 187 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 246
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 247 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 284
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 285 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 325

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 34  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 86
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 87  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 179
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 180 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 240 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 277
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 278 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 30  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 82
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 83  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 175
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 176 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 235
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 236 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 273
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 274 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 314

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 34  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 86
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 87  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 179
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 180 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 240 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 277
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 278 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 35  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 87
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 88  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 180
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 181 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 240
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 241 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 278
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 279 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 319

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 26  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 86  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 142
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +  +K+ DFG    
Sbjct: 143 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 175
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           L+ L  +  +LG   Q  L  +        R   L  P             K+P   N +
Sbjct: 236 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 280
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 281 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLAQYY 319

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           RY+ L+ IG G  G V    D      VAIK +    + +  A      L L+K      
Sbjct: 18  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 71
Query: 156 SRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
             CV  +N     N             + +V E++  +L   ++         + +  + 
Sbjct: 72  --CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLL 125
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T              
Sbjct: 126 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-------------- 171
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
               F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF  
Sbjct: 172 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
            + ++    ++E++  P P+ M     K  +  VR    + P+ A         L  P+L
Sbjct: 221 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 267
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
              +L     +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 26  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 78
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 79  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 171
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 172 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 231
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 232 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 269
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 270 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 310

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           RY+ L+ IG G  G V    D      VAIK +    + +  A      L L+K      
Sbjct: 25  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 78
Query: 156 SRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
             CV  +N     N             + +V E++  +L   ++         + +  + 
Sbjct: 79  --CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLL 132
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T              
Sbjct: 133 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-------------- 178
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
               F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF  
Sbjct: 179 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
            + ++    ++E++  P P+ M     K  +  VR    + P+ A         L  P+L
Sbjct: 228 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 274
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
              +L     +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 156/365 (42%), Gaps = 61/365 (16%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + ++    +++ LL  +    S         +    + IV E++  +
Sbjct: 63  NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 115 LSQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T                  F  T Y        V TR+YRAPEVILG+G+   
Sbjct: 171 GLARTAGTS-----------------FMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K   +P  +     R
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
             +     S E +   +  P       +H    A    DLL  +L  D S R++  +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
           HP+  
Sbjct: 318 HPYIN 322

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 75  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 168 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 265
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 75  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 168 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 265
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 75  -IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 168 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 265
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 23  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 75
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 76  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 168
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 169 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 228
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 229 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 266
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 267 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 307

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 147/358 (41%), Gaps = 74/358 (20%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
            +  RY+ L+ IG G  G V    D   G  VA+K +    + +  A      L LLK  
Sbjct: 19  TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK-- 76
Query: 152 DRSGSRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
                 CV  +N     N             + +V E++  +L   +    +     + +
Sbjct: 77  ------CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----HMELDHERM 126
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
             +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T          
Sbjct: 127 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST---------- 176
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
                  +F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ EL  G  
Sbjct: 177 -------NFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV 221
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRV---------DKPAEKFVRRGRLDWPEGATSR 370
           +FQ  ++++    +   LG      +  +         ++PA   +    L +P+     
Sbjct: 222 IFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEEL-FPDWIFPS 280
Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
           ES +  +K  + +               DLL  +L  DP  R++  +AL+HP+ T  Y
Sbjct: 281 ESERDKIKTSQAR---------------DLLSKMLVIDPDKRISVDEALRHPYITVWY 323

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 138/338 (40%), Gaps = 84/338 (24%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDR 153
           Y IL ++G G FG V  C+++ TG     K + +   + KY      EI ++  L     
Sbjct: 53  YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHH--- 107
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
              + + + + F+ +  + ++ E L G  L+D +   +Y+    +++  + RQ  E +  
Sbjct: 108 --PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM-RQACEGLKH 164
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           MH+  ++H D+KPENI+                             K+S++K+IDFG   
Sbjct: 165 MHEHSIVHLDIKPENIMC-------------------------ETKKASSVKIIDFGLAT 199
Query: 273 YEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
             + +       +T  + APE++      +  DMW++G +   L SG + F   ++LE L
Sbjct: 200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL 259
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             ++R                          DW     +  S+    K            
Sbjct: 260 QNVKRC-------------------------DWEFDEDAFSSVSPEAK------------ 282
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                   D ++ LL+ +P  RLT HDAL+HP+   D+
Sbjct: 283 --------DFIKNLLQKEPRKRLTVHDALEHPWLKGDH 312

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L  +   LKI D+ +   +  D ++   L             T Y
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL-------------TEY 187
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                   V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     L+ L  
Sbjct: 188 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 239
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
           +  +LG   Q  L  +        R   L  P             K+P   N +  + D 
Sbjct: 240 ILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 284
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 285 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K+++         L+++++ D    
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 75  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 168 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 265
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L  +   LKI D+ +   +  D ++   L             T Y
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL-------------TEY 191
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                   V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     L+ L  
Sbjct: 192 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 243
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
           +  +LG   Q  L  +        R   L  P             K+P   N +  + D 
Sbjct: 244 ILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 288
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 289 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 148/342 (43%), Gaps = 56/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           RY+ L+ IG G  G V    D      VAIK +    + +  A      L L+K  +   
Sbjct: 25  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 156 SRCVQIRNWFDYR------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
              + + N F  +        + +V E++  +L   ++         + +  +  Q+L  
Sbjct: 85  --IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLCG 138
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +  +H   +IH DLKP NI+  S   LKI D+ +   + T                  F 
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-----------------SFM 181
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
            T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++ 
Sbjct: 182 MTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 330 L-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL--QNLV 386
              ++E++  P P+ M     K  +  VR    + P+ A         L  P+L   +L 
Sbjct: 234 WNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKLFPDSLF 280
Query: 387 MQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
               +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 281 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 26  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 86  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 142
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +  +K+ DFG    
Sbjct: 143 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 175
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           L+ L  +  +LG   Q  L  +        R   L  P             K+P   N +
Sbjct: 236 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 280
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 281 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 319

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 143/340 (42%), Gaps = 45/340 (13%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLK 149
           ++  RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +
Sbjct: 40  DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +  G   +      +    + IV +++   LY  L+  +      D +     Q+L  
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 156
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   ++H DLKP N+L  +   LKI D+ +   +  D ++   L            
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL------------ 204
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
            T Y        V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     L+
Sbjct: 205 -TEY--------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 255
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
            L  +  +LG   Q  L  +        R   L  P             K+P   N +  
Sbjct: 256 QLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFP 300
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
           + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 301 NADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 337

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 143/339 (42%), Gaps = 65/339 (19%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K ++         L+++++ D    
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 75  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 168 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E A  +       K+ R    
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTEFAFPQIKAHPWTKVFR---- 272
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +    I L   LL Y P++RLT  +A  H FF
Sbjct: 273 -----PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 148/342 (43%), Gaps = 56/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           RY+ L+ IG G  G V    D      VAIK +    + +  A      L L+K  +   
Sbjct: 25  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 156 SRCVQIRNWFDYR------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
              + + N F  +        + +V E++  +L   ++         + +  +  Q+L  
Sbjct: 85  --IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +  +H   +IH DLKP NI+  S   LKI D+ +   + T                  F 
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-----------------SFM 181
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
            T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++ 
Sbjct: 182 MTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 330 L-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL--QNLV 386
              ++E++  P P+ M     K  +  VR    + P+ A         L  P+L   +L 
Sbjct: 234 WNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKLFPDSLF 280
Query: 387 MQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
               +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 281 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 153/342 (44%), Gaps = 65/342 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMT--EIDVLELLKRYD 152
           R + LR +G G +G V    D    + VA+K + R  +    A  T  E+ +L+ LK  +
Sbjct: 21  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 80
Query: 153 RSG-----SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
             G     +    I ++    + + +V  ++G  L + ++    +    + V+ +  QLL
Sbjct: 81  VIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVK---CQALSDEHVQFLVYQLL 133
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++H   +IH DLKP N+                      VN      +   ++++D
Sbjct: 134 RGLKYIHSAGIIHRDLKPSNVA---------------------VN------EDCELRILD 166
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           FG      +E    V+TR YRAPE++L  + ++   D+WSVGCI+ EL  G+ALF   + 
Sbjct: 167 FGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 226
Query: 327 LEHLA-MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
           ++ L  +ME V  P P+ + K   + A  +++                     LP +   
Sbjct: 227 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--------------------SLPPMPQK 266
Query: 386 VMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
            +  +   A  L IDLL  +L  D   R++A +AL H +F++
Sbjct: 267 DLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 32  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 92  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 148
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L  +   LKI D+ +   +  D ++   L             T Y
Sbjct: 149 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL-------------TEY 195
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                   V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     L+ L  
Sbjct: 196 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 247
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
           +  +LG   Q  L  +        R   L  P             K+P   N +  + D 
Sbjct: 248 ILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 292
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 293 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 325

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L  +   LKI D+ +   +  D ++   L             T Y
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL-------------TEY 187
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                   V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     L+ L  
Sbjct: 188 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 239
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
           +  +LG   Q  L  +        R   L  P             K+P   N +  + D 
Sbjct: 240 ILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 284
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 285 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 144/341 (42%), Gaps = 69/341 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K ++         L+++++ D    
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 75  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 168 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E            K P+++  
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 265
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
               V    +    I L   LL Y P++RLT  +A  H FF
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +  +K+ DFG    
Sbjct: 141 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 173
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           L+ L  +  +LG   Q  L  +        R   L  P             K+P   N +
Sbjct: 234 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 278
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 279 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 22  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 82  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 138
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +  +K+ DFG    
Sbjct: 139 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 171
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           L+ L  +  +LG   Q  L  +        R   L  P             K+P   N +
Sbjct: 232 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 276
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 277 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 315

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +  +K+ DFG    
Sbjct: 145 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 177
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 178 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           L+ L  +  +LG   Q  L  +        R   L  P             K+P   N +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 282
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 283 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 29  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 89  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 145
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +  +K+ DFG    
Sbjct: 146 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 178
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 179 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           L+ L  +  +LG   Q  L  +        R   L  P             K+P   N +
Sbjct: 239 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 283
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 284 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 322

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 29  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 89  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 145
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +  +K+ DFG    
Sbjct: 146 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 178
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 179 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           L+ L  +  +LG   Q  L  +        R   L  P             K+P   N +
Sbjct: 239 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 283
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 284 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 322

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 30  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 90  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 146
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +  +K+ DFG    
Sbjct: 147 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 179
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 180 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 239
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           L+ L  +  +LG   Q  L  +        R   L  P             K+P   N +
Sbjct: 240 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 284
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 285 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 323

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 21  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 81  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 137
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +  +K+ DFG    
Sbjct: 138 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 170
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 171 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 230
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           L+ L  +  +LG   Q  L  +        R   L  P             K+P   N +
Sbjct: 231 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 275
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 276 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 314

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +  +K+ DFG    
Sbjct: 145 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 177
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           L+ L  +  +LG   Q  L  +        R   L  P             K+P   N +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 282
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 283 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + +     +++ LL  +    S         +    + IV E++  +
Sbjct: 63  NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 115 LSQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T                  F  T Y        V TR+YRAPEVILG+G+   
Sbjct: 171 GLARTAGTS-----------------FMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K   +P  +     R
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
             +     S E +   +  P       +H    A    DLL  +L  D S R++  +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
           HP+  
Sbjct: 318 HPYIN 322

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 145/357 (40%), Gaps = 72/357 (20%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
            +  RY+ L+ IG G  G V    D   G  VA+K +    + +  A      L LLK  
Sbjct: 21  TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK-- 78
Query: 152 DRSGSRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
                 CV  +N     N             + +V E++  +L   +    +     + +
Sbjct: 79  ------CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----HMELDHERM 128
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
             +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T          
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT---------- 178
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
                  +F  T Y        V TR+YRAPEVILG+G++   D+WSVGCI+ EL  G  
Sbjct: 179 -------NFMMTPY--------VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCV 223
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR--------RGRLDWPEGATSRE 371
           +FQ  ++++    +   LG      +  +      +V         +    +P+     E
Sbjct: 224 IFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSE 283
Query: 372 SIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
           S +  +K  + +               DLL  +L  DP  R++  +AL+HP+ T  Y
Sbjct: 284 SERDKIKTSQAR---------------DLLSKMLVIDPDKRISVDEALRHPYITVWY 325

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 143/339 (42%), Gaps = 65/339 (19%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y   + IG G+FG V      ++GE VAIK V   K ++         L+++++ D    
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
             V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL  
Sbjct: 75  -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +A++H   + H D+KP+N+L                            P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           GS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F    
Sbjct: 168 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            ++ L  + +VLG            P  + +R    ++ E A  +       K+ R    
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTEFAFPQIKAHPWTKVFR---- 272
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +    I L   LL Y P++RLT  +A  H FF
Sbjct: 273 -----PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +  + 
Sbjct: 22  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 82  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 138
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +  +K+ DFG    
Sbjct: 139 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 171
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           L+ L  +  +LG   Q  L  +        R   L  P             K+P   N +
Sbjct: 232 LDQLNHILGILGSPEQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 276
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 277 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 315

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 158/366 (43%), Gaps = 63/366 (17%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V+   D      VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + ++    +++ LL  +    S         +    + IV E++  +
Sbjct: 63  NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 115 LSQVIQME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T                  F  T Y        V TR+YRAPEVILG+G+   
Sbjct: 171 GLARTAGTS-----------------FMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVG I+ E+  G  LF   ++++    ++E++  P P+ M     K  +  VR   
Sbjct: 206 VDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-----KKLQPTVRTYV 260
Query: 361 LDWPEGAT-SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
            + P+ A  S E +   +  P       +H    A    DLL  +L  D S R++  +AL
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 420 KHPFFT 425
           +HP+  
Sbjct: 317 QHPYIN 322

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           RY+ L+ IG G  G V    D      VAIK +    + +  A      L L+K      
Sbjct: 63  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 116
Query: 156 SRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
             CV  +N     N             + +V E++  +L   ++         + +  + 
Sbjct: 117 --CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLL 170
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T              
Sbjct: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-------------- 216
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
               F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF  
Sbjct: 217 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
            + ++    ++E++  P P+ M     K  +  VR    + P+ A         L  P+L
Sbjct: 266 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 312
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
              +L     +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 313 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 4   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + +     +++ LL  +    S         +    + IV E++  +
Sbjct: 64  NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 115
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 116 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 171
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T                  F  T Y        V TR+YRAPEVILG+G+   
Sbjct: 172 GLARTAGT-----------------SFMMTPY--------VVTRYYRAPEVILGMGYKEN 206
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K   +P  +     R
Sbjct: 207 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENR 264
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
             +     S E +   +  P       +H    A    DLL  +L  D S R++  +AL+
Sbjct: 265 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318
Query: 421 HPFFT 425
           HP+  
Sbjct: 319 HPYIN 323

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 141/346 (40%), Gaps = 57/346 (16%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLK 149
           ++  RY  L  IGEG +G V    D      VAIK +     + Y +  + EI +L   +
Sbjct: 24  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +  G   +      +    + IV +++   LY  L+  +      D +     Q+L  
Sbjct: 84  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHICYFLYQILRG 140
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   ++H DLKP N+L                           L  +  +K+ DFG
Sbjct: 141 LKYIHSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFG 173
Query: 270 STAYEHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ 322
                  +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F 
Sbjct: 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
               L+ L  +  +LG   Q  L  +        R   L  P             K+P  
Sbjct: 234 GKHYLDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP-- 278
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            N +  + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 279 WNRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           RY+ L+ IG G  G V    D      VAIK +    + +  A      L L+K      
Sbjct: 63  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 116
Query: 156 SRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
             CV  +N     N             + +V E++  +L   ++         + +  + 
Sbjct: 117 --CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLL 170
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T              
Sbjct: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-------------- 216
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
               F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF  
Sbjct: 217 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
            + ++    ++E++  P P+ M     K  +  VR    + P+ A         L  P+L
Sbjct: 266 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 312
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
              +L     +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 313 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + +     +++ LL  +    S         +    + IV E++  +
Sbjct: 63  NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 115 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T                  F  T Y        V TR+YRAPEVILG+G+   
Sbjct: 171 GLARTAGT-----------------SFMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K   +P  +     R
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
             +     S E +   +  P       +H    A    DLL  +L  D S R++  +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
           HP+  
Sbjct: 318 HPYIN 322

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
           RY  L  IGEG +G V    D      VAI+ +     + Y +  + EI +L   +  + 
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            G   +      +    + IV +++   LY  L+  +      D +     Q+L  + ++
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   ++H DLKP N+L                           L  +  +K+ DFG    
Sbjct: 145 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 177
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              +H++       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           L+ L  +  +LG   Q  L  +        R   L  P             K+P   N +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 282
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 283 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 35/260 (13%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           +G G FGQV  C +  TG  +A K++++   K +E    EI V+  L       +  +Q+
Sbjct: 97  LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDH-----ANLIQL 151
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
            + F+ +N I +V E + G  L+D +   +Y    +D +  + +Q+ E +  MH + ++H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFM-KQICEGIRHMHQMYILH 210
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STAYEHQEHN 279
            DLKPENIL V+ +                         +  IK+IDFG +  Y+ +E  
Sbjct: 211 LDLKPENILCVNRD-------------------------AKQIKIIDFGLARRYKPREKL 245
Query: 280 YI-VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
            +   T  + APEV+     S+P DMWSVG I   L SG + F    + E L  +     
Sbjct: 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW 305
Query: 339 PIPQHMLKRVDKPAEKFVRR 358
            +     + + + A++F+ +
Sbjct: 306 DLEDEEFQDISEEAKEFISK 325

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 150/348 (43%), Gaps = 68/348 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI----D 143
           RY+ L+ IG G  G V    D      VAIK +         + + YRE  + +     +
Sbjct: 24  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 83
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           ++ LL  +    +         +    + +V E++  +L   ++         + +  + 
Sbjct: 84  IISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLL 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T              
Sbjct: 132 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-------------- 177
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
               F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF  
Sbjct: 178 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 226
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
            + ++    ++E++  P P+ M     K  +  VR    + P+ A         L  P+L
Sbjct: 227 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 273
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
              +L     +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 274 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 150/348 (43%), Gaps = 68/348 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI----D 143
           RY+ L+ IG G  G V    D      VAIK +         + + YRE  + +     +
Sbjct: 25  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           ++ LL  +    +         +    + +V E++  +L   ++         + +  + 
Sbjct: 85  IISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLL 132
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T              
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-------------- 178
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
               F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF  
Sbjct: 179 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
            + ++    ++E++  P P+ M     K  +  VR    + P+ A         L  P+L
Sbjct: 228 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 274
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
              +L     +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 150/348 (43%), Gaps = 68/348 (19%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI----D 143
           RY+ L+ IG G  G V    D      VAIK +         + + YRE  + +     +
Sbjct: 26  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
           ++ LL  +    +         +    + +V E++  +L   ++         + +  + 
Sbjct: 86  IISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLL 133
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T              
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-------------- 179
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
               F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF  
Sbjct: 180 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 228
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
            + ++    ++E++  P P+ M     K  +  VR    + P+ A         L  P+L
Sbjct: 229 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 275
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
              +L     +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 276 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 68/352 (19%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI- 142
            +  RY+ L+ IG G  G V    D      VAIK +         + + YRE  + +  
Sbjct: 22  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
              +++ LL  +    +         +    + +V E++  +L   ++         + +
Sbjct: 82  NHKNIISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERM 129
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
             +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T          
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---------- 179
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
                   F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + 
Sbjct: 180 -------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
Query: 320 LFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
           LF   + ++    ++E++  P P+ M     K  +  VR    + P+ A         L 
Sbjct: 225 LFPGRDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LT 271
Query: 379 LPRL--QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            P+L   +L     +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 272 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 68/352 (19%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI- 142
            +  RY+ L+ IG G  G V    D      VAIK +         + + YRE  + +  
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
              +++ LL  +    +         +    + +V E++  +L   ++         + +
Sbjct: 75  NHKNIISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERM 122
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
             +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T          
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---------- 172
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
                   F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + 
Sbjct: 173 -------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
Query: 320 LFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
           LF   + ++    ++E++  P P+ M     K  +  VR    + P+ A         L 
Sbjct: 218 LFPGRDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LT 264
Query: 379 LPRL--QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            P+L   +L     +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 265 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 68/352 (19%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI- 142
            +  RY+ L+ IG G  G V    D      VAIK +         + + YRE  + +  
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
              +++ LL  +    +         +    + +V E++  +L   ++         + +
Sbjct: 81  NHKNIISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERM 128
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
             +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T          
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---------- 178
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
                   F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + 
Sbjct: 179 -------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
Query: 320 LFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
           LF   + ++    ++E++  P P+ M     K  +  VR    + P+ A         L 
Sbjct: 224 LFPGRDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LT 270
Query: 379 LPRL--QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            P+L   +L     +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 271 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + +     +++ LL  +    S         +    + IV E++  +
Sbjct: 63  NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 115 LSQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T                  F  T Y        V TR+YRAPEVILG+G+   
Sbjct: 171 GLARTAGT-----------------SFMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K   +P  +     R
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
             +     S E +   +  P       +H    A    DLL  +L  D S R++  +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
           HP+  
Sbjct: 318 HPYIN 322

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 68/352 (19%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI- 142
            +  RY+ L+ IG G  G V    D      VAIK +         + + YRE  + +  
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
              +++ LL  +    +         +    + +V E++  +L   ++         + +
Sbjct: 75  NHKNIISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERM 122
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
             +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T          
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---------- 172
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
                   F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + 
Sbjct: 173 -------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
Query: 320 LFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
           LF   + ++    ++E++  P P+ M     K  +  VR    + P+ A         L 
Sbjct: 218 LFPGRDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LT 264
Query: 379 LPRL--QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            P+L   +L     +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 265 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + +     +++ LL  +    S         +    + IV E++  +
Sbjct: 63  NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 115 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T                  F  T Y        V TR+YRAPEVILG+G+   
Sbjct: 171 GLARTAGT-----------------SFMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K   +P  +     R
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
             +     S E +   +  P       +H    A    DLL  +L  D S R++  +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
           HP+  
Sbjct: 318 HPYIN 322

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 134/339 (39%), Gaps = 80/339 (23%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLK 149
           +++   Y I  ++G G FG V    +R TG   A K V +  +  +E    EI  + +L+
Sbjct: 47  DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 106
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                    V + + F+  N + +++E M G  L++ +  + +     D   E  RQ+ +
Sbjct: 107 H-----PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCK 160
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +  MH+   +H DLKPENI+F +                          +S+ +K+IDF
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTT-------------------------KRSNELKLIDF 195
Query: 269 GSTAY--EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           G TA+    Q       T  + APEV  G    Y  DMWSVG +   L SG + F    +
Sbjct: 196 GLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 255
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
            E L  ++     +       + +  + F+R+                            
Sbjct: 256 DETLRNVKSCDWNMDDSAFSGISEDGKDFIRK---------------------------- 287
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                            LL  DP++R+T H AL+HP+ T
Sbjct: 288 -----------------LLLADPNTRMTIHQALEHPWLT 309

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 68/352 (19%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI- 142
            +  RY+ L+ IG G  G V    D      VAIK +         + + YRE  + +  
Sbjct: 14  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
              +++ LL  +    +         +    + +V E++  +L   ++         + +
Sbjct: 74  NHKNIISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERM 121
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
             +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T          
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---------- 171
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
                   F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + 
Sbjct: 172 -------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216
Query: 320 LFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
           LF   + ++    ++E++  P P+ M     K  +  VR    + P+ A         L 
Sbjct: 217 LFPGRDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LT 263
Query: 379 LPRL--QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            P+L   +L     +H+   A    DLL  +L  DP+ R++  DAL+HP+  
Sbjct: 264 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 63/366 (17%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + ++    +++ LL  +    S         +    + IV E++  +
Sbjct: 63  NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 115 LSQVIQME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T                  F  T Y        V TR+YRAPEVILG+G+   
Sbjct: 171 GLARTAGTS-----------------FMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVG I+ E+  G  LF   ++++    ++E++  P P+ M     K  +  VR   
Sbjct: 206 VDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-----KKLQPTVRTYV 260
Query: 361 LDWPEGAT-SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
            + P+ A  S E +   +  P       +H    A    DLL  +L  D S R++  +AL
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 420 KHPFFT 425
           +HP+  
Sbjct: 317 QHPYIN 322

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 131/333 (39%), Gaps = 80/333 (24%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLKRYDRSG 155
           Y I  ++G G FG V    +R TG   A K V +  +  +E    EI  + +L+      
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH----- 213
Query: 156 SRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V + + F+  N + +++E M G  L++ +  + +     D   E  RQ+ + +  MH
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
           +   +H DLKPENI+F +                          +S+ +K+IDFG TA+ 
Sbjct: 273 ENNYVHLDLKPENIMFTT-------------------------KRSNELKLIDFGLTAHL 307
Query: 274 -EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
              Q       T  + APEV  G    Y  DMWSVG +   L SG + F    + E L  
Sbjct: 308 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRN 367
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
           ++     +       + +  + F+R+                                  
Sbjct: 368 VKSCDWNMDDSAFSGISEDGKDFIRK---------------------------------- 393
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                      LL  DP++R+T H AL+HP+ T
Sbjct: 394 -----------LLLADPNTRMTIHQALEHPWLT 415

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 5   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 64
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + +     +++ LL  +    S         +    + IV E++  +
Sbjct: 65  NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 116
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 117 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 172
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T    +  +P                       V TR+YRAPEVILG+G+   
Sbjct: 173 GLARTAGTS---FMMVP----------------------FVVTRYYRAPEVILGMGYKEN 207
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K   +P  +     R
Sbjct: 208 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENR 265
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
             +     S E +   +  P       +H    A    DLL  +L  D S R++  +AL+
Sbjct: 266 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 319
Query: 421 HPFFT 425
           HP+  
Sbjct: 320 HPYIN 324

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 154/365 (42%), Gaps = 61/365 (16%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 8   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 67
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + +     +++ LL  +    S         +    + IV E++  +
Sbjct: 68  NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 119
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 120 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 175
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T                  F  T Y        V TR+YRAPEVILG+G+   
Sbjct: 176 GLARTAGT-----------------SFMMTPY--------VVTRYYRAPEVILGMGYKEN 210
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+   + LF   + ++    ++E++  P P+ M K   +P  +     R
Sbjct: 211 VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENR 268
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
             +     S E +   +  P       +H    A    DLL  +L  D S R++  +AL+
Sbjct: 269 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 322
Query: 421 HPFFT 425
           HP+  
Sbjct: 323 HPYIN 327

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + +     +++ LL  +    S         +    + IV E++  +
Sbjct: 63  NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 115 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +   + T    +   P+                      V TR+YRAPEVILG+G+   
Sbjct: 171 GLARTAGTS---FMMTPE----------------------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K   +P  +     R
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
             +     S E +   +  P       +H    A    DLL  +L  D S R++  +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNALKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
           HP+  
Sbjct: 318 HPYIN 322

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 158/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E VA+K+++ +KK +     +  +LE L    R G 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N+L +  E+ K+                         ++ID+G   + 
Sbjct: 149 SMGIMHRDVKPHNVL-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 146/347 (42%), Gaps = 58/347 (16%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI- 142
            +  RY+ L+ IG G  G V    D      VAIK +         + + YRE  + +  
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
              +++ LL  +    S         +    + IV E++  +L   ++         + +
Sbjct: 75  NHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDANLCQVIQME----LDHERM 122
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
             +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+ +   + T          
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---------- 172
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
                   F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + 
Sbjct: 173 -------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 217
Query: 320 LFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
           LF   + ++    ++E++  P P+ M K   +P  +     R  +     S E +   + 
Sbjct: 218 LFPGRDYIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENRPKY--AGYSFEKLFPDVL 273
Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            P       +H    A    DLL  +L  D S R++  +AL+HP+  
Sbjct: 274 FPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 144/354 (40%), Gaps = 104/354 (29%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY------------REAAMTEI-- 142
           Y++   IG+G F  V  C++RETG+  A+K+V  + K+            REA++  +  
Sbjct: 26  YELCEVIGKGAFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 143 --DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVR 200
              ++ELL+ Y   G     +   F++ +   + FE++  +   F+       +   +  
Sbjct: 85  HPHIVELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFV-------YSEAVAS 133
Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
              RQ+LE + + HD  +IH D+KPEN+L  S E                         S
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPENVLLASKE------------------------NS 169
Query: 261 SAIKVIDFGSTAYEHQEHNYI----VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
           + +K+ DFG  A +  E   +    V T H+ APEV+    +  P D+W  G IL  L S
Sbjct: 170 APVKLGDFG-VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G         L      ER+   I                                IK  
Sbjct: 229 G--------CLPFYGTKERLFEGI--------------------------------IKGK 248
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYY 429
            K+   Q     H+  SA    DL++ +L  DP+ R+T ++AL HP+   RD Y
Sbjct: 249 YKMNPRQ---WSHISESAK---DLVRRMLMLDPAERITVYEALNHPWLKERDRY 296

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 142/339 (41%), Gaps = 81/339 (23%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
           + L+  +++  ++G G    V  C  + T +  A+KV++     ++   TEI VL  L  
Sbjct: 49  DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRL-- 105
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
              S    ++++  F+    I +V E++ G  L+D + +  Y  +      +  +Q+LE 
Sbjct: 106 ---SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQILEA 160
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           VA++H+  ++H DLKPEN+L+ +P     PD                    + +K+ DFG
Sbjct: 161 VAYLHENGIVHRDLKPENLLYATPA----PD--------------------APLKIADFG 196
Query: 270 -STAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELCSGEALFQTHEN 326
            S   EHQ     +  T  Y APE++ G  +    DMWSVG I  I LC  E  +    +
Sbjct: 197 LSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD 256
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
                          Q M +R+      F+      W E + + +               
Sbjct: 257 ---------------QFMFRRILNCEYYFISPW---WDEVSLNAK--------------- 283
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                       DL++ L+  DP  RLT   AL+HP+ T
Sbjct: 284 ------------DLVRKLIVLDPKKRLTTFQALQHPWVT 310

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 149/363 (41%), Gaps = 86/363 (23%)
Query: 83  GHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA- 137
           G ++    + L   Y + + +G G  G+V    +R+T + VAIK++     +I   REA 
Sbjct: 4   GSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREAD 63
Query: 138 -AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
            A+     +E+LK+ +      ++I+N+FD  ++  ++  M G  L+D +  N  +    
Sbjct: 64  PALNVETEIEILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKE 119
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
              +    Q+L  V ++H+  +IH DLKPEN+L  S E                      
Sbjct: 120 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE---------------------- 157
Query: 257 LPKSSAIKVIDFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCIL 311
             +   IK+ DFG +    E      +  T  Y APEV++ +   G++   D WS+G IL
Sbjct: 158 --EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
Query: 312 IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW-PEGATSR 370
               SG   F  H                      R     +  +  G+ ++ PE     
Sbjct: 216 FICLSGYPPFSEH----------------------RTQVSLKDQITSGKYNFIPE----- 248
Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYY 429
                          V   V   A   +DL++ LL  DP +R T  +AL+HP+    D  
Sbjct: 249 ---------------VWAEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 290
Query: 430 RRF 432
           R+F
Sbjct: 291 RKF 293

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 133/337 (39%), Gaps = 81/337 (24%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSG 155
           ++I+ ++G+G FG+V    ++ET    A KV+ +  +   E  M EID+L          
Sbjct: 39  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH----- 93
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              V++ + F Y N++ I+ E       D +     RP     ++ + +Q L+ + ++HD
Sbjct: 94  PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
            ++IH DLK  NILF     +K+ D+ V+A++   +                        
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI------------------------ 189
Query: 276 QEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
           Q  +  + T ++ APEV++        + Y  D+WS+G  LIE+   E            
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP----------- 238
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
                     P H L                           ++ +LK+ + +   +   
Sbjct: 239 ----------PHHELN-------------------------PMRVLLKIAKSEPPTLAQP 263
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
              +    D L+  L  +  +R T    L+HPF T D
Sbjct: 264 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 133/337 (39%), Gaps = 81/337 (24%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSG 155
           ++I+ ++G+G FG+V    ++ET    A KV+ +  +   E  M EID+L          
Sbjct: 39  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH----- 93
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              V++ + F Y N++ I+ E       D +     RP     ++ + +Q L+ + ++HD
Sbjct: 94  PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
            ++IH DLK  NILF     +K+ D+ V+A++   +                        
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI------------------------ 189
Query: 276 QEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
           Q  +  + T ++ APEV++        + Y  D+WS+G  LIE+   E            
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP----------- 238
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
                     P H L                           ++ +LK+ + +   +   
Sbjct: 239 ----------PHHELN-------------------------PMRVLLKIAKSEPPTLAQP 263
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
              +    D L+  L  +  +R T    L+HPF T D
Sbjct: 264 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 133/337 (39%), Gaps = 81/337 (24%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSG 155
           ++I+ ++G+G FG+V    ++ET    A KV+ +  +   E  M EID+L          
Sbjct: 39  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH----- 93
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              V++ + F Y N++ I+ E       D +     RP     ++ + +Q L+ + ++HD
Sbjct: 94  PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
            ++IH DLK  NILF     +K+ D+ V+A++   +                        
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI------------------------ 189
Query: 276 QEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
           Q  +  + T ++ APEV++        + Y  D+WS+G  LIE+   E            
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP----------- 238
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
                     P H L                           ++ +LK+ + +   +   
Sbjct: 239 ----------PHHELN-------------------------PMRVLLKIAKSEPPTLAQP 263
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
              +    D L+  L  +  +R T    L+HPF T D
Sbjct: 264 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 145/353 (41%), Gaps = 86/353 (24%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA--AMTEIDVLE 146
           L   Y + + +G G  G+V    +R+T + VAIK++     +I   REA  A+     +E
Sbjct: 8   LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +LK+ +      ++I+N+FD  ++  ++  M G  L+D +  N  +       +    Q+
Sbjct: 68  ILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQM 123
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L  V ++H+  +IH DLKPEN+L  S E                        +   IK+ 
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKIT 159
Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF 321
           DFG +    E      +  T  Y APEV++ +   G++   D WS+G IL    SG   F
Sbjct: 160 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW-PEGATSRESIKAVLKLP 380
             H                      R     +  +  G+ ++ PE               
Sbjct: 220 SEH----------------------RTQVSLKDQITSGKYNFIPE--------------- 242
Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYYRRF 432
                V   V   A   +DL++ LL  DP +R T  +AL+HP+    D  R+F
Sbjct: 243 -----VWAEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 287

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 155/362 (42%), Gaps = 83/362 (22%)
Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMTEI------ 142
           G +L SRY  L+ +G G  G V   +D +  + VAIK +V +  +  + A+ EI      
Sbjct: 6   GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL 65
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
              +++++ +    SGS+           N + IV E +   L + L +    P   +  
Sbjct: 66  DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG---PLLEEHA 122
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE--YLKIPDYKVTARSPTDVNYYKRL 257
           R    QLL  + ++H   ++H DLKP N LF++ E   LKI D+ +              
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPAN-LFINTEDLVLKIGDFGLA------------- 168
Query: 258 PKSSAIKVIDFGSTAYEHQEH-NYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC 315
                 +++D     Y H+ H +  + T+ YR+P ++L    ++   DMW+ GCI  E+ 
Sbjct: 169 ------RIMD---PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 219
Query: 316 SGEALFQTHENLEHLAMM------------ERVLGPIPQHMLKRVDKPAEKFVRRGRLDW 363
           +G+ LF     LE + ++            + +L  IP ++   + +P +   +      
Sbjct: 220 TGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQL----L 275
Query: 364 PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
           P    SRE+                         +D L+ +L + P  RLTA +AL HP+
Sbjct: 276 P--GISREA-------------------------VDFLEQILTFSPMDRLTAEEALSHPY 308
Query: 424 FT 425
            +
Sbjct: 309 MS 310

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 145/353 (41%), Gaps = 86/353 (24%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA--AMTEIDVLE 146
           L   Y + + +G G  G+V    +R+T + VAIK++     +I   REA  A+     +E
Sbjct: 7   LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +LK+ +      ++I+N+FD  ++  ++  M G  L+D +  N  +       +    Q+
Sbjct: 67  ILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQM 122
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L  V ++H+  +IH DLKPEN+L  S E                        +   IK+ 
Sbjct: 123 LLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKIT 158
Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF 321
           DFG +    E      +  T  Y APEV++ +   G++   D WS+G IL    SG   F
Sbjct: 159 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW-PEGATSRESIKAVLKLP 380
             H                      R     +  +  G+ ++ PE               
Sbjct: 219 SEH----------------------RTQVSLKDQITSGKYNFIPE--------------- 241
Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYYRRF 432
                V   V   A   +DL++ LL  DP +R T  +AL+HP+    D  R+F
Sbjct: 242 -----VWAEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 286

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 145/353 (41%), Gaps = 86/353 (24%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA--AMTEIDVLE 146
           L   Y + + +G G  G+V    +R+T + VAIK++     +I   REA  A+     +E
Sbjct: 8   LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +LK+ +      ++I+N+FD  ++  ++  M G  L+D +  N  +       +    Q+
Sbjct: 68  ILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQM 123
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L  V ++H+  +IH DLKPEN+L  S E                        +   IK+ 
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKIT 159
Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF 321
           DFG +    E      +  T  Y APEV++ +   G++   D WS+G IL    SG   F
Sbjct: 160 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW-PEGATSRESIKAVLKLP 380
             H                      R     +  +  G+ ++ PE               
Sbjct: 220 SEH----------------------RTQVSLKDQITSGKYNFIPE--------------- 242
Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYYRRF 432
                V   V   A   +DL++ LL  DP +R T  +AL+HP+    D  R+F
Sbjct: 243 -----VWAEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 287

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 145/353 (41%), Gaps = 86/353 (24%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA--AMTEIDVLE 146
           L   Y + + +G G  G+V    +R+T + VAIK++     +I   REA  A+     +E
Sbjct: 8   LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +LK+ +      ++I+N+FD  ++  ++  M G  L+D +  N  +       +    Q+
Sbjct: 68  ILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQM 123
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L  V ++H+  +IH DLKPEN+L  S E                        +   IK+ 
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKIT 159
Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF 321
           DFG +    E      +  T  Y APEV++ +   G++   D WS+G IL    SG   F
Sbjct: 160 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW-PEGATSRESIKAVLKLP 380
             H                      R     +  +  G+ ++ PE               
Sbjct: 220 SEH----------------------RTQVSLKDQITSGKYNFIPE--------------- 242
Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYYRRF 432
                V   V   A   +DL++ LL  DP +R T  +AL+HP+    D  R+F
Sbjct: 243 -----VWAEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 287

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR--------EAAMTEIDVLELL 148
           Y+++RK+G G + +V + ++    E   IK+++ +KK +        +  M   ++++LL
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGGPNIVKLL 92
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  S+   +   F+Y N+    F++L P+L D+             +R    +LL+
Sbjct: 93  DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 136
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + + H   ++H D+KP N++          D+++                   +++ID+
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 170
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
           G   + H  +E+N  V++R+++ PE+++ L  + Y  DMWS+GC+   +    E  F  H
Sbjct: 171 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
           +N + L  + +VLG    ++          ++ + R++     E    R S K  LK   
Sbjct: 231 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 280
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             N   QH+       ID L  LLRYD   RLTA +A+ HP+F +
Sbjct: 281 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 156/365 (42%), Gaps = 61/365 (16%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + +     +++ LL  +    S         +    + IV E++  +
Sbjct: 63  NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 115 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            + AR+                       T++  +     V TR+YRAPEVILG+G+   
Sbjct: 171 GL-ART---------------------AGTSFMMEPE---VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+   + LF   + ++    ++E++  P P+ M K   +P  +     R
Sbjct: 206 VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
             +     S E +   +  P       +H    A    DLL  +L  D S R++  +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
           HP+  
Sbjct: 318 HPYIN 322

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 63/366 (17%)
Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
               + + YRE  + +     +++ LL  +    S         +    + IV E++  +
Sbjct: 63  NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
           L   ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+
Sbjct: 115 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            + AR+                       T++  +     V TR+YRAPEVILG+G+   
Sbjct: 171 GL-ART---------------------AGTSFMMEPE---VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
            D+WSVGCI+ E+   + LF   + ++    ++E++  P P  M     K  +  VR   
Sbjct: 206 VDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFM-----KKLQPTVRNYV 260
Query: 361 LDWPEGAT-SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
            + P+ A  S E +   +  P       +H    A    DLL  +L  D S R++  +AL
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 420 KHPFFT 425
           +HP+  
Sbjct: 317 QHPYIN 322

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 158/345 (45%), Gaps = 72/345 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
           Y+++RK+G G + +V + ++    E   IK+++ +KK +     +I        ++++LL
Sbjct: 54  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 113
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  S+   +   F+Y N+    F++L P+L D+             +R    +LL+
Sbjct: 114 DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 157
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + + H   ++H D+KP N++          D+++                   +++ID+
Sbjct: 158 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 191
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
           G   + H  +E+N  V++R+++ PE+++ L  + Y  DMWS+GC+   +    E  F  H
Sbjct: 192 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 251
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
           +N + L  + +VLG                ++ + R++     E    R S K  LK   
Sbjct: 252 DNHDQLVKIAKVLGT----------DGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMN 301
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             N   QH+       ID L  LLRYD   RLTA +A+ HP+F +
Sbjct: 302 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 341

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
           Y+++RK+G G + +V + ++    E   IK+++ +KK +     +I        ++++LL
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  S+   +   F+Y N+    F++L P+L D+             +R    +LL+
Sbjct: 93  DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 136
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + + H   ++H D+KP N++          D+++                   +++ID+
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 170
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
           G   + H  +E+N  V++R+++ PE+++ L  + Y  DMWS+GC+   +    E  F  H
Sbjct: 171 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
           +N + L  + +VLG    ++          ++ + R++     E    R S K  LK   
Sbjct: 231 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 280
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             N   QH+       ID L  LLRYD   RLTA +A+ HP+F +
Sbjct: 281 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
           Y+++RK+G G + +V + ++    E   IK+++ +KK +     +I        ++++LL
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  S+   +   F+Y N+    F++L P+L D+             +R    +LL+
Sbjct: 93  DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 136
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + + H   ++H D+KP N++          D+++                   +++ID+
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 170
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
           G   + H  +E+N  V++R+++ PE+++ L  + Y  DMWS+GC+   +    E  F  H
Sbjct: 171 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
           +N + L  + +VLG    ++          ++ + R++     E    R S K  LK   
Sbjct: 231 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 280
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             N   QH+       ID L  LLRYD   RLTA +A+ HP+F +
Sbjct: 281 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
           Y+++RK+G G + +V + ++    E   IK+++ +KK +     +I        ++++LL
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  S+   +   F+Y N+    F++L P+L D+             +R    +LL+
Sbjct: 93  DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 136
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + + H   ++H D+KP N++          D+++                   +++ID+
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 170
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
           G   + H  +E+N  V++R+++ PE+++ L  + Y  DMWS+GC+   +    E  F  H
Sbjct: 171 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
           +N + L  + +VLG    ++          ++ + R++     E    R S K  LK   
Sbjct: 231 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 280
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             N   QH+       ID L  LLRYD   RLTA +A+ HP+F +
Sbjct: 281 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
           Y+++RK+G G + +V + ++    E   IK+++ +KK +     +I        ++++LL
Sbjct: 34  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 93
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  S+   +   F+Y N+    F++L P+L D+             +R    +LL+
Sbjct: 94  DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 137
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + + H   ++H D+KP N++          D+++                   +++ID+
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 171
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
           G   + H  +E+N  V++R+++ PE+++ L  + Y  DMWS+GC+   +    E  F  H
Sbjct: 172 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 231
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
           +N + L  + +VLG    ++          ++ + R++     E    R S K  LK   
Sbjct: 232 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 281
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             N   QH+       ID L  LLRYD   RLTA +A+ HP+F +
Sbjct: 282 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 321

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
           Y+++RK+G G + +V + ++    E   IK+++ +KK +     +I        ++++LL
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 92
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  S+   +   F+Y N+    F++L P+L D+             +R    +LL+
Sbjct: 93  DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 136
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + + H   ++H D+KP N++          D+++                   +++ID+
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 170
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
           G   + H  +E+N  V++R+++ PE+++ L  + Y  DMWS+GC+   +    E  F  H
Sbjct: 171 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
           +N + L  + +VLG    ++          ++ + R++     E    R S K  LK   
Sbjct: 231 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 280
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             N   QH+       ID L  LLRYD   RLTA +A+ HP+F +
Sbjct: 281 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
           Y+++RK+G G + +V + ++    E   IK+++ +KK +     +I        ++++LL
Sbjct: 34  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 93
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  S+   +   F+Y N+    F++L P+L D+             +R    +LL+
Sbjct: 94  DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 137
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + + H   ++H D+KP N++          D+++                   +++ID+
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 171
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
           G   + H  +E+N  V++R+++ PE+++ L  + Y  DMWS+GC+   +    E  F  H
Sbjct: 172 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 231
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
           +N + L  + +VLG    ++          ++ + R++     E    R S K  LK   
Sbjct: 232 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 281
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             N   QH+       ID L  LLRYD   RLTA +A+ HP+F +
Sbjct: 282 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 321

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 144/352 (40%), Gaps = 84/352 (23%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA--AMTEIDVLE 146
           L   Y + + +G G  G+V    +R+T + VAI+++     +I   REA  A+     +E
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 206
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +LK+ +      ++I+N+FD  ++  ++  M G  L+D +  N  +       +    Q+
Sbjct: 207 ILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQM 262
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L  V ++H+  +IH DLKPEN+L  S E                        +   IK+ 
Sbjct: 263 LLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKIT 298
Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF 321
           DFG +    E      +  T  Y APEV++ +   G++   D WS+G IL    SG   F
Sbjct: 299 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
             H                      R     +  +  G+ ++     +  S KA      
Sbjct: 359 SEH----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKA------ 390
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYYRRF 432
                           +DL++ LL  DP +R T  +AL+HP+    D  R+F
Sbjct: 391 ----------------LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 426

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
           Y+++RK+G G + +V + ++    E   IK+++ +KK +     +I        ++++LL
Sbjct: 35  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 94
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  S+   +   F+Y N+    F++L P+L D+             +R    +LL+
Sbjct: 95  DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 138
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + + H   ++H D+KP N++          D+++                   +++ID+
Sbjct: 139 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 172
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
           G   + H  +E+N  V++R+++ PE+++ L  + Y  DMWS+GC+   +    E  F  H
Sbjct: 173 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 232
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
           +N + L  + +VLG    ++          ++ + R++     E    R S K  LK   
Sbjct: 233 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 282
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             N   QH+       ID L  LLRYD   RLTA +A+ HP+F +
Sbjct: 283 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 322

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 144/352 (40%), Gaps = 84/352 (23%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA--AMTEIDVLE 146
           L   Y + + +G G  G+V    +R+T + VAI+++     +I   REA  A+     +E
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +LK+ +      ++I+N+FD  ++  ++  M G  L+D +  N  +       +    Q+
Sbjct: 193 ILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQM 248
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L  V ++H+  +IH DLKPEN+L  S E                        +   IK+ 
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKIT 284
Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF 321
           DFG +    E      +  T  Y APEV++ +   G++   D WS+G IL    SG   F
Sbjct: 285 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
             H                      R     +  +  G+ ++     +  S KA      
Sbjct: 345 SEH----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKA------ 376
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYYRRF 432
                           +DL++ LL  DP +R T  +AL+HP+    D  R+F
Sbjct: 377 ----------------LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 412

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
           Y+++RK+G G + +V + ++    E   IK+++ +KK +     +I        ++++LL
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 92
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  S+   +   F+Y N+    F++L P+L D+             +R    +LL+
Sbjct: 93  DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 136
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + + H   ++H D+KP N++          D+++                   +++ID+
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 170
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
           G   + H  +E+N  V++R+++ PE+++ L  + Y  DMWS+GC+   +    E  F  H
Sbjct: 171 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
           +N + L  + +VLG    ++          ++ + R++     E    R S K  LK   
Sbjct: 231 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 280
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             N   QH+       ID L  LLRYD   RLTA +A+ HP+F +
Sbjct: 281 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 38  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 91
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 92  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 147
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 148 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 181
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 182 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 242 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 291
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 292 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 323

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 38  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 91
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 92  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 147
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 148 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 181
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 182 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 242 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 291
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
              +   +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 292 --VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 37  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 90
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 91  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 146
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 147 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 180
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 181 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 240
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 241 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 290
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 291 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 322

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 44  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 97
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 98  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 153
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 154 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 187
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 188 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 247
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 248 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 297
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 298 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 329

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + + +           +VFE +  +  DF  K  Y+      +R    ++L+ + + H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            + ++H D+KP N++ +  E+ K+                         ++ID+G   + 
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
           H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + +VLG   + +   +DK   +   R           R S K   +    +N   QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 159/336 (47%), Gaps = 58/336 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y+++RK+G G + +V + ++    E V +K+++ +KK +     +  +LE L    R G 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAF 212
             + + +           +VFE +  + +  LR+   +Y       +R    ++L+ + +
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQTLTDYD------IRFYMYEILKALDY 146
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H + ++H D+KP N++ +  E+ K+                         ++ID+G   
Sbjct: 147 CHSMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAE 180
Query: 273 YEH--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLE 328
           + H  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N +
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 240
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
            L  + +VLG   + +   +DK   +   R           R S K   +    +N   Q
Sbjct: 241 QLVRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---Q 290
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           H+   +   +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 291 HL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 52/297 (17%)
Query: 72  GTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI 131
           G   +R +D + HY   +GE L          G G F  V  C  + TG+  A K ++  
Sbjct: 1   GMSTFRQEDVEDHY--EMGEEL----------GSGQFAIVRKCRQKGTGKEYAAKFIKKR 48
Query: 132 K-------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLY 183
           +         RE    E+++L  ++         + + + F+ +  + ++ E++ G  L+
Sbjct: 49  RLSSSRRGVSREEIEREVNILREIRH-----PNIITLHDIFENKTDVVLILELVSGGELF 103
Query: 184 DFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV 243
           DFL +        D   +  +Q+L+ V ++H  R+ H DLKPENI+ +            
Sbjct: 104 DFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD----------- 150
Query: 244 TARSPTDVNYYKRLPKSSAIKVIDFGST--AYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
                      K +P +  IK+IDFG         E   I  T  + APE++        
Sbjct: 151 -----------KNVP-NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
            DMWS+G I   L SG + F      E L  +  V     +       + A+ F+RR
Sbjct: 199 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 130/345 (37%), Gaps = 87/345 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                                   LL  DP  R+T  D+L+HP+ 
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPWI 275

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                   LL  DP  R+T  D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 66  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 155
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 156 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 215 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 253
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                   LL  DP  R+T  D+L+HP+
Sbjct: 254 ------------------------LLVKDPKKRMTIQDSLQHPW 273

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 66  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 155
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 156 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 215 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 253
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                   LL  DP  R+T  D+L+HP+
Sbjct: 254 ------------------------LLVKDPKKRMTIQDSLQHPW 273

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                   LL  DP  R+T  D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                   LL  DP  R+T  D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 130/345 (37%), Gaps = 87/345 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                                   LL  DP  R+T  D+L+HP+ 
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPWI 275

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                   LL  DP  R+T  D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                   LL  DP  R+T  D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                   LL  DP  R+T  D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                   LL  DP  R+T  D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 130/345 (37%), Gaps = 87/345 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                                   LL  DP  R+T  D+L+HP+ 
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPWI 275

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 153/361 (42%), Gaps = 40/361 (11%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAA--MTEIDVLELLK 149
           +  RY+I   IG G++G V +  D+     VAIK ++R  +   +    + EI +L  L 
Sbjct: 51  IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL----VREIGRQ 205
                    + I    +  + + +V E+         R       PV L    ++ +   
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT------PVYLTELHIKTLLYN 164
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV--TARSPTDVNYYKRL-PKSSA 262
           LL  V ++H   ++H DLKP N L      +K+ D+ +  T   P + N    + P+   
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALF 321
           + ++ F  T    ++    V TR YRAPE+IL    ++   D+WS+GCI  EL     L 
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL-----LN 279
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAE--KFVRRGRLDWPE------GATSRESI 373
              EN+ + A    +        L    K     KF  RG  D         G  S E I
Sbjct: 280 MIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDI 339
Query: 374 KAVLK---------LPRLQNL-VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
           +A+ K          P+ +   + +    S+   I LL+ +L ++P+ R+T ++ L HPF
Sbjct: 340 EALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPF 399
Query: 424 F 424
           F
Sbjct: 400 F 400

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEIQH-----PNVITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                   LL  DP  R+T  D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 130/345 (37%), Gaps = 87/345 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                       + +PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           IK+IDFG  A++     E   I  T  + APE++         DMWS+G I   L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F      E LA +  V               A+ F+RR                     
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                                   LL  DP  R+T  D+L+HP+ 
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPWI 275

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 43/243 (17%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAM-TEIDVLELLKR 150
           N+   +  +  +G G F +V     R TG+  A+K ++    +R++++  EI VL+ +K 
Sbjct: 6   NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYD-FLRKNNYRPFPVDLVREIGRQLLE 208
                   V + + ++   H  +V +++ G  L+D  L +  Y      LV +   Q+L 
Sbjct: 66  -----ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVLS 117
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V ++H+  ++H DLKPEN+L+++PE                        ++S I + DF
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPE------------------------ENSKIMITDF 153
Query: 269 GSTAYEHQEHNYIVSTR----HYRAPEVILGLGWSYPCDMWSVGCIL-IELCSGEALFQT 323
           G +     E N I+ST      Y APEV+    +S   D WS+G I  I LC     ++ 
Sbjct: 154 GLS---KMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210
Query: 324 HEN 326
            E+
Sbjct: 211 TES 213

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 114/272 (41%), Gaps = 40/272 (14%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-------REAAMTEIDVLELLK 149
           Y++  ++G G F  V  C  + TG+  A K ++  +         RE    E+++L  ++
Sbjct: 28  YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                    + + + F+ +  + ++ E++ G  L+DFL +        D   +  +Q+L+
Sbjct: 88  H-----PNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILD 140
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V ++H  R+ H DLKPENI+ +                       K +P +  IK+IDF
Sbjct: 141 GVHYLHSKRIAHFDLKPENIMLLD----------------------KNVP-NPRIKLIDF 177
Query: 269 GST--AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           G         E   I  T  + APE++         DMWS+G I   L SG + F     
Sbjct: 178 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK 237
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
            E L  +  V     +       + A+ F+RR
Sbjct: 238 QETLTNISAVNYDFDEEYFSNTSELAKDFIRR 269

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 40/272 (14%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-------KYREAAMTEIDVLELLK 149
           Y++  ++G G F  V  C  + TG+  A K ++  +         RE    E+++L  ++
Sbjct: 7   YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
             +      + + + F+ +  + ++ E++ G  L+DFL +        D   +  +Q+L+
Sbjct: 67  HPN-----IITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILD 119
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V ++H  R+ H DLKPENI+ +                       K +P +  IK+IDF
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLD----------------------KNVP-NPRIKLIDF 156
Query: 269 GST--AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           G         E   I  T  + APE++         DMWS+G I   L SG + F     
Sbjct: 157 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK 216
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
            E L  +  V     +       + A+ F+RR
Sbjct: 217 QETLTNISAVNYDFDEEYFSNTSELAKDFIRR 248

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 43/243 (17%)
Query: 89  LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELL 148
           +G+ +  RYKI+ K+G G    V    D      VAIK +    + +E         E L
Sbjct: 5   IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKE---------ETL 55
Query: 149 KRYDR--------SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLV 199
           KR++R        S    V + +  +  +   +V E + GP+L +++   ++ P  VD  
Sbjct: 56  KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTA 113
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
                Q+L+ +   HD+R++H D+KP+NIL  S + LKI D+ +           K L +
Sbjct: 114 INFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA----------KALSE 163
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           +S  +              N+++ T  Y +PE   G       D++S+G +L E+  GE 
Sbjct: 164 TSLTQT-------------NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEP 210
Query: 320 LFQ 322
            F 
Sbjct: 211 PFN 213

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 141/354 (39%), Gaps = 104/354 (29%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY------------REAAMTEI-- 142
           Y++   IG+G F  V  C++RETG+  A+K+V  + K+            REA++  +  
Sbjct: 28  YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 143 --DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVR 200
              ++ELL+ Y   G     +   F++ +   + FE++  +   F+       +   +  
Sbjct: 87  HPHIVELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFV-------YSEAVAS 135
Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
              RQ+LE + + HD  +IH D+KP  +L  S E                         S
Sbjct: 136 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE------------------------NS 171
Query: 261 SAIKVIDFGSTAYEHQEHNYI----VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
           + +K+  FG  A +  E   +    V T H+ APEV+    +  P D+W  G IL  L S
Sbjct: 172 APVKLGGFG-VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 230
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G         L      ER+   I                                IK  
Sbjct: 231 G--------CLPFYGTKERLFEGI--------------------------------IKGK 250
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYY 429
            K+   Q     H+  SA    DL++ +L  DP+ R+T ++AL HP+   RD Y
Sbjct: 251 YKMNPRQ---WSHISESAK---DLVRRMLMLDPAERITVYEALNHPWLKERDRY 298

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 139/342 (40%), Gaps = 94/342 (27%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y +   IG G++ +   C+ + T    A+KV   I K +     EI   E+L RY +   
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEI---EILLRYGQH-P 81
Query: 157 RCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLV-REIGRQLLECVAFM 213
             + +++ +D   H+ +V E++  G  L   LR+  +       V   IG+     V ++
Sbjct: 82  NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK----TVEYL 137
Query: 214 HDLRLIHTDLKPENILFV----SPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           H   ++H DLKP NIL+V    +PE L+I                            DFG
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRI---------------------------CDFG 170
Query: 270 STAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
                  E+  +++   T ++ APEV+   G+   CD+WS+G +L  + +G   F     
Sbjct: 171 FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN--- 227
Query: 327 LEHLAMMERVLGP--IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
                      GP   P+ +L R+   + KF   G  +W    T  E+ K          
Sbjct: 228 -----------GPSDTPEEILTRIG--SGKFTLSGG-NW---NTVSETAK---------- 260
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                         DL+  +L  DP  RLTA   L+HP+ T+
Sbjct: 261 --------------DLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 139/342 (40%), Gaps = 94/342 (27%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y +   IG G++ +   C+ + T    A+KV   I K +     EI   E+L RY +   
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEI---EILLRYGQH-P 81
Query: 157 RCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLV-REIGRQLLECVAFM 213
             + +++ +D   H+ +V E++  G  L   LR+  +       V   IG+     V ++
Sbjct: 82  NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK----TVEYL 137
Query: 214 HDLRLIHTDLKPENILFV----SPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           H   ++H DLKP NIL+V    +PE L+I                            DFG
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRI---------------------------CDFG 170
Query: 270 STAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
                  E+  +++   T ++ APEV+   G+   CD+WS+G +L  + +G   F     
Sbjct: 171 FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN--- 227
Query: 327 LEHLAMMERVLGP--IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
                      GP   P+ +L R+   + KF   G  +W    T  E+ K          
Sbjct: 228 -----------GPSDTPEEILTRIG--SGKFTLSGG-NW---NTVSETAK---------- 260
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                         DL+  +L  DP  RLTA   L+HP+ T+
Sbjct: 261 --------------DLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 141/354 (39%), Gaps = 104/354 (29%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY------------REAAMTEI-- 142
           Y++   IG+G F  V  C++RETG+  A+K+V  + K+            REA++  +  
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 143 --DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVR 200
              ++ELL+ Y   G     +   F++ +   + FE++  +   F+       +   +  
Sbjct: 85  HPHIVELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFV-------YSEAVAS 133
Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
              RQ+LE + + HD  +IH D+KP  +L  S E                         S
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE------------------------NS 169
Query: 261 SAIKVIDFGSTAYEHQEHNYI----VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
           + +K+  FG  A +  E   +    V T H+ APEV+    +  P D+W  G IL  L S
Sbjct: 170 APVKLGGFG-VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G         L      ER+   I                                IK  
Sbjct: 229 G--------CLPFYGTKERLFEGI--------------------------------IKGK 248
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYY 429
            K+   Q     H+  SA    DL++ +L  DP+ R+T ++AL HP+   RD Y
Sbjct: 249 YKMNPRQ---WSHISESAK---DLVRRMLMLDPAERITVYEALNHPWLKERDRY 296

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 32/223 (14%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           + +L K+GEG++G V   + +ETG+ VAIK V  ++   +  + EI +++          
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQC-----DSP 84
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
             V+    +     + IV E  G  S+ D +R  N +    D +  I +  L+ + ++H 
Sbjct: 85  HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHF 143
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
           +R IH D+K  NIL  +  + K+ D+ V                         G      
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVA------------------------GQLTDXM 179
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
            + N ++ T  + APEVI  +G++   D+WS+G   IE+  G+
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 140/343 (40%), Gaps = 89/343 (25%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K+++   K R         +EL  R     
Sbjct: 33  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 81
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 82  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 177
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG  A E   HN + +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++
Sbjct: 178 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 236
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
             L            I   M  R        +R G+ ++P    S  S +  +       
Sbjct: 237 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 270
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                          L++ LL+ +P+ R+T  + + HP+  + 
Sbjct: 271 ---------------LIRNLLKTEPTQRMTITEFMNHPWIMQS 298

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 136/342 (39%), Gaps = 82/342 (23%)
Query: 93  LTSRYKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
           +T  Y++ +++ G G  G+VL+C  R TG+  A+K++    K R+    E+D       +
Sbjct: 26  VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVD-----HHW 76
Query: 152 DRSGS-RCVQIRNWFDYRNH----ICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
             SG    V I + ++  +H    + I+ E M G  L+  +++   + F      EI R 
Sbjct: 77  QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 136
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +   + F+H   + H D+KPEN+L+ S E                        K + +K+
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKL 172
Query: 266 IDFGSTAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
            DFG      Q        T +Y APEV+    +   CDMWS+G I+  L  G       
Sbjct: 173 TDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG------- 225
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
                         P   +  + +    ++ +R G+  +P                   N
Sbjct: 226 ------------FPPFYSNTGQAISPGMKRRIRLGQYGFP-------------------N 254
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                V   A  LI L   LL+ DP+ RLT    + HP+  +
Sbjct: 255 PEWSEVSEDAKQLIRL---LLKTDPTERLTITQFMNHPWINQ 293

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 159/365 (43%), Gaps = 83/365 (22%)
Query: 73  TPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK 132
            P W N D                Y+++RK+G G + +V + ++    E V +K+++ +K
Sbjct: 36  VPSWGNQDD---------------YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVK 80
Query: 133 KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNN 190
           K  +    E+ +LE L    R G+  +++ +           +VFE +  +  DF  K  
Sbjct: 81  K--KKIKREVKILENL----RGGTNIIKLIDTVKDPVSKTPALVFEYINNT--DF--KQL 130
Query: 191 YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
           Y+      +R    +LL+ + + H   ++H D+KP N++                     
Sbjct: 131 YQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDH------------------ 172
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEH--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSV 307
                   +   +++ID+G   + H  QE+N  V++R+++ PE+++    + Y  DMWS+
Sbjct: 173 --------QQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 224
Query: 308 GCILIELC-SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE- 365
           GC+L  +    E  F   +N + L  + +VLG           +    ++++  +D    
Sbjct: 225 GCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT----------EELYGYLKKYHIDLDPH 274
Query: 366 -----GATSRESIKAVLKLPRLQNLVMQHVDHSAG-YLIDLLQGLLRYDPSSRLTAHDAL 419
                G  SR+         R +N +     H      +DLL  LLRYD   RLTA +A+
Sbjct: 275 FNDILGQHSRK---------RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAM 325
Query: 420 KHPFF 424
           +HP+F
Sbjct: 326 EHPYF 330

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 159/365 (43%), Gaps = 83/365 (22%)
Query: 73  TPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK 132
            P W N D                Y+++RK+G G + +V + ++    E V +K+++ +K
Sbjct: 31  VPSWGNQDD---------------YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVK 75
Query: 133 KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNN 190
           K  +    E+ +LE L    R G+  +++ +           +VFE +  +  DF  K  
Sbjct: 76  K--KKIKREVKILENL----RGGTNIIKLIDTVKDPVSKTPALVFEYINNT--DF--KQL 125
Query: 191 YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
           Y+      +R    +LL+ + + H   ++H D+KP N++                     
Sbjct: 126 YQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDH------------------ 167
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEH--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSV 307
                   +   +++ID+G   + H  QE+N  V++R+++ PE+++    + Y  DMWS+
Sbjct: 168 --------QQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 219
Query: 308 GCILIELC-SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE- 365
           GC+L  +    E  F   +N + L  + +VLG           +    ++++  +D    
Sbjct: 220 GCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT----------EELYGYLKKYHIDLDPH 269
Query: 366 -----GATSRESIKAVLKLPRLQNLVMQHVDHSAG-YLIDLLQGLLRYDPSSRLTAHDAL 419
                G  SR+         R +N +     H      +DLL  LLRYD   RLTA +A+
Sbjct: 270 FNDILGQHSRK---------RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAM 320
Query: 420 KHPFF 424
           +HP+F
Sbjct: 321 EHPYF 325

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 42/273 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLK 149
           Y I  ++G G F  V  C ++ TG   A K ++  +         RE    E+ +L  + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
            ++      + + + ++ R  + ++ E++ G  L+DFL +        +      +Q+L+
Sbjct: 74  HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V ++H  ++ H DLKPENI+ +    + IP                       IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           G  A+E +   E   I  T  + APE++         DMWS+G I   L SG + F    
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
             E LA +  V     +    +  + A+ F+R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 57/297 (19%)
Query: 87  FALGENLTSRYKILRK-IGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEI 142
           F   EN  + Y +  K +G G F  V  C+ + TG+  A K ++  ++    R   + EI
Sbjct: 20  FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEI 79
Query: 143 DVLELLKRYDRSGSRCVQIRNWFDYRNHICIV---------FEMLGPSLYDFLRKNNYRP 193
            VLEL K    S  R + +   ++  + I ++         F +  P L + + +N    
Sbjct: 80  AVLELAK----SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN---- 131
Query: 194 FPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY 253
              D++R I +Q+LE V ++H   ++H DLKP+NIL  S   L                 
Sbjct: 132 ---DVIRLI-KQILEGVYYLHQNNIVHLDLKPQNILLSSIYPL----------------- 170
Query: 254 YKRLPKSSAIKVIDFGST-----AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVG 308
                    IK++DFG +     A E +E   I+ T  Y APE++     +   DMW++G
Sbjct: 171 -------GDIKIVDFGMSRKIGHACELRE---IMGTPEYLAPEILNYDPITTATDMWNIG 220
Query: 309 CILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE 365
            I   L +  + F   +N E    + +V     +     V + A  F++   +  PE
Sbjct: 221 IIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPE 277

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 141/344 (40%), Gaps = 93/344 (27%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K+++   K R         +EL  R     
Sbjct: 69  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 117
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 118 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 213
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG  A E   HN + +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++
Sbjct: 214 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 272
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRL 382
             L            I   M  R        +R G+ ++  PE +   E +K        
Sbjct: 273 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 306
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                            L++ LL+ +P+ R+T  + + HP+  +
Sbjct: 307 -----------------LIRNLLKTEPTQRMTITEFMNHPWIMQ 333

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 42/273 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLK 149
           Y I  ++G G F  V  C ++ TG   A K ++  +         RE    E+ +L  + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
            ++      + + + ++ R  + ++ E++ G  L+DFL +        +      +Q+L+
Sbjct: 74  HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V ++H  ++ H DLKPENI+ +    + IP                       IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           G  A+E +   E   I  T  + APE++         DMWS+G I   L SG + F    
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
             E LA +  V     +    +  + A+ F+R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 141/344 (40%), Gaps = 93/344 (27%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K+++   K R         +EL  R     
Sbjct: 63  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 111
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 207
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG  A E   HN + +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++
Sbjct: 208 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRL 382
             L            I   M  R        +R G+ ++  PE +   E +K        
Sbjct: 267 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 300
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                            L++ LL+ +P+ R+T  + + HP+  +
Sbjct: 301 -----------------LIRNLLKTEPTQRMTITEFMNHPWIMQ 327

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 136/342 (39%), Gaps = 82/342 (23%)
Query: 93  LTSRYKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
           +T  Y++ +++ G G  G+VL+C  R TG+  A+K++    K R+    E+D       +
Sbjct: 7   VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVD-----HHW 57
Query: 152 DRSGS-RCVQIRNWFDYRNH----ICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
             SG    V I + ++  +H    + I+ E M G  L+  +++   + F      EI R 
Sbjct: 58  QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 117
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +   + F+H   + H D+KPEN+L+ S E                        K + +K+
Sbjct: 118 IGTAIQFLHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKL 153
Query: 266 IDFGSTAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
            DFG      Q        T +Y APEV+    +   CDMWS+G I+  L  G       
Sbjct: 154 TDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG------- 206
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
                         P   +  + +    ++ +R G+  +P                   N
Sbjct: 207 ------------FPPFYSNTGQAISPGMKRRIRLGQYGFP-------------------N 235
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                V   A  LI L   LL+ DP+ RLT    + HP+  +
Sbjct: 236 PEWSEVSEDAKQLIRL---LLKTDPTERLTITQFMNHPWINQ 274

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 140/343 (40%), Gaps = 89/343 (25%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K+++   K R         +EL  R     
Sbjct: 17  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 65
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 66  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 161
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG  A E   HN + +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++
Sbjct: 162 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 220
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
             L            I   M  R        +R G+ ++P    S  S +  +       
Sbjct: 221 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 254
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                          L++ LL+ +P+ R+T  + + HP+  + 
Sbjct: 255 ---------------LIRNLLKTEPTQRMTITEFMNHPWIMQS 282

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 42/273 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLK 149
           Y I  ++G G F  V  C ++ TG   A K ++  +         RE    E+ +L  + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
            ++      + + + ++ R  + ++ E++ G  L+DFL +        +      +Q+L+
Sbjct: 74  HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILD 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V ++H  ++ H DLKPENI+ +    + IP                       IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           G  A+E +   E   I  T  + APE++         DMWS+G I   L SG + F    
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
             E LA +  V     +       + A+ F+R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 140/343 (40%), Gaps = 89/343 (25%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K+++   K R         +EL  R     
Sbjct: 25  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 73
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 74  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 169
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG  A E   HN + +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++
Sbjct: 170 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 228
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
             L            I   M  R        +R G+ ++P    S  S +  +       
Sbjct: 229 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 262
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                          L++ LL+ +P+ R+T  + + HP+  + 
Sbjct: 263 ---------------LIRNLLKTEPTQRMTITEFMNHPWIMQS 290

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 141/344 (40%), Gaps = 93/344 (27%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K+++   K R         +EL  R     
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 67
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 68  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 163
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG  A E   HN + +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++
Sbjct: 164 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 222
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRL 382
             L            I   M  R        +R G+ ++  PE +   E +K        
Sbjct: 223 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 256
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                            L++ LL+ +P+ R+T  + + HP+  +
Sbjct: 257 -----------------LIRNLLKTEPTQRMTITEFMNHPWIMQ 283

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 141/345 (40%), Gaps = 93/345 (26%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K+++   K R         +EL  R     
Sbjct: 18  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 66
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 67  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 162
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG  A E   HN + +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++
Sbjct: 163 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 221
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRL 382
             L            I   M  R        +R G+ ++  PE +   E +K        
Sbjct: 222 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 255
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                            L++ LL+ +P+ R+T  + + HP+  + 
Sbjct: 256 -----------------LIRNLLKTEPTQRMTITEFMNHPWIMQS 283

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 42/273 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLK 149
           Y I  ++G G F  V  C ++ TG   A K ++  +         RE    E+ +L  + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
            ++      + + + ++ R  + ++ E++ G  L+DFL +        +      +Q+L+
Sbjct: 74  HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V ++H  ++ H DLKPENI+ +    + IP                       IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           G  A+E +   E   I  T  + APE++         DMWS+G I   L SG + F    
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
             E LA +  V     +       + A+ F+R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 42/273 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLK 149
           Y I  ++G G F  V  C ++ TG   A K ++  +         RE    E+ +L  + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
            ++      + + + ++ R  + ++ E++ G  L+DFL +        +      +Q+L+
Sbjct: 74  HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V ++H  ++ H DLKPENI+ +    + IP                       IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           G  A+E +   E   I  T  + APE++         DMWS+G I   L SG + F    
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
             E LA +  V     +       + A+ F+R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 141/345 (40%), Gaps = 93/345 (26%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K+++   K R         +EL  R     
Sbjct: 24  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 72
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 73  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 168
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG  A E   HN + +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++
Sbjct: 169 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 227
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRL 382
             L            I   M  R        +R G+ ++  PE +   E +K        
Sbjct: 228 HGLA-----------ISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 261
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                            L++ LL+ +P+ R+T  + + HP+  + 
Sbjct: 262 -----------------LIRNLLKTEPTQRMTITEFMNHPWIMQS 289

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 140/343 (40%), Gaps = 89/343 (25%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K+++   K R         +EL  R     
Sbjct: 23  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 71
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 72  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 167
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG  A E   HN + +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++
Sbjct: 168 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 226
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
             L            I   M  R        +R G+ ++P    S  S +  +       
Sbjct: 227 HGLA-----------ISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 260
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                          L++ LL+ +P+ R+T  + + HP+  + 
Sbjct: 261 ---------------LIRNLLKTEPTQRMTITEFMNHPWIMQS 288

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 140/342 (40%), Gaps = 89/342 (26%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K+++   K R         +EL  R     
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 67
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 68  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 163
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG  A E   HN + +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++
Sbjct: 164 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 222
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
             L            I   M  R        +R G+ ++P    S  S +  +       
Sbjct: 223 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 256
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                          L++ LL+ +P+ R+T  + + HP+  +
Sbjct: 257 ---------------LIRNLLKTEPTQRMTITEFMNHPWIMQ 283

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 140/344 (40%), Gaps = 93/344 (27%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K+++   K R         +EL  R     
Sbjct: 17  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 65
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 66  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 161
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG  A E   HN +     T +Y APEV+    +   CDMWS+G I+  L  G   F ++
Sbjct: 162 FG-FAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 220
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRL 382
             L            I   M  R        +R G+ ++  PE +   E +K        
Sbjct: 221 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 254
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                            L++ LL+ +P+ R+T  + + HP+  +
Sbjct: 255 -----------------LIRNLLKTEPTQRMTITEFMNHPWIMQ 281

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 135/358 (37%), Gaps = 96/358 (26%)
Query: 87  FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---------SIKKYREA 137
           +A  +    +Y     IG G    V  C+ R TG   A+K++           +++ REA
Sbjct: 86  WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145
Query: 138 AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPV 196
              E  +L    R        + + + ++  + + +VF+++    L+D+L +        
Sbjct: 146 TRRETHIL----RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSE 199
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
              R I R LLE V+F+H   ++H DLKPENIL                           
Sbjct: 200 KETRSIMRSLLEAVSFLHANNIVHRDLKPENIL--------------------------- 232
Query: 257 LPKSSAIKVIDFGSTAYEH--QEHNYIVSTRHYRAPEVI------LGLGWSYPCDMWSVG 308
           L  +  I++ DFG + +    ++   +  T  Y APE++         G+    D+W+ G
Sbjct: 233 LDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACG 292
Query: 309 CILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGAT 368
            IL  L +G   F     +  L M+                   E   +    +W     
Sbjct: 293 VILFTLLAGSPPFWHRRQILMLRMI------------------MEGQYQFSSPEW----- 329
Query: 369 SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                                 D  +  + DL+  LL+ DP +RLTA  AL+HPFF R
Sbjct: 330 ----------------------DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 130/341 (38%), Gaps = 93/341 (27%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV----------RSIKKYREAAMTEIDVLELLKRYD 152
           +G G    V  C+ + T +  A+K++            +++ REA + E+D+L    R  
Sbjct: 25  LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL----RKV 80
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS-LYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 +Q+++ ++      +VF+++    L+D+L +           R+I R LLE + 
Sbjct: 81  SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVIC 138
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
            +H L ++H DLKPENIL      +K+ D+  + +                   +D G  
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ-------------------LDPGEK 179
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGL------GWSYPCDMWSVGCILIELCSGEALFQTHE 325
             E      +  T  Y APE+I         G+    DMWS G I+  L +G   F   +
Sbjct: 180 LRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            +                ML+ +     +F   G  +W                      
Sbjct: 234 QM---------------LMLRMIMSGNYQF---GSPEW---------------------- 253
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                D  +  + DL+   L   P  R TA +AL HPFF +
Sbjct: 254 -----DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 143/360 (39%), Gaps = 81/360 (22%)
Query: 102 KIGEGTFGQVLD------------CLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
           K+G GT+G V               L +  G  +++   R I   RE  +   +V+ L K
Sbjct: 28  KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRE--LKHPNVISLQK 85
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRP--FPVDLVREIGRQLL 207
            +     R V +   FDY  H     ++     +    K N +P   P  +V+ +  Q+L
Sbjct: 86  VFLSHADRKVWL--LFDYAEH-----DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 138
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           + + ++H   ++H DLKP NIL +                          P+   +K+ D
Sbjct: 139 DGIHYLHANWVLHRDLKPANILVMG-----------------------EGPERGRVKIAD 175
Query: 268 ------FGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEAL 320
                 F S      + + +V T  YRAPE++LG   ++   D+W++GCI  EL + E +
Sbjct: 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 235
Query: 321 FQTHE------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW------PEGAT 368
           F   +      N  H   ++R+           +  PA+K       DW      PE +T
Sbjct: 236 FHCRQEDIKTSNPYHHDQLDRIFN--------VMGFPADK-------DWEDIKKMPEHST 280
Query: 369 SRESI-KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
             +   +       L   + +H          LLQ LL  DP  R+T+  A++ P+F  D
Sbjct: 281 LMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED 340

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 132/340 (38%), Gaps = 75/340 (22%)
Query: 88  ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLEL 147
            +GE +   +K+   +G+G+F  V       TG  VAIK++     Y+ A M +    E+
Sbjct: 5   CIGEKIED-FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQRVQNEV 62
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
                      +++ N+F+  N++ +V EM      +   KN  +PF  +  R    Q++
Sbjct: 63  KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII 122
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++H   ++H DL   N+L      +KI D+ +  +         ++P         
Sbjct: 123 TGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQ--------LKMP--------- 165
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
                  H++H  +  T +Y +PE+          D+WS+GC+   L  G   F T    
Sbjct: 166 -------HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT---- 214
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
                 + V   + + +L   + P                 S  SI+A            
Sbjct: 215 ------DTVKNTLNKVVLADYEMP-----------------SFLSIEAK----------- 240
Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                      DL+  LLR +P+ RL+    L HPF +R+
Sbjct: 241 -----------DLIHQLLRRNPADRLSLSSVLDHPFMSRN 269

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 130/341 (38%), Gaps = 93/341 (27%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV----------RSIKKYREAAMTEIDVLELLKRYD 152
           +G G    V  C+ + T +  A+K++            +++ REA + E+D+L    R  
Sbjct: 12  LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL----RKV 67
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS-LYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 +Q+++ ++      +VF+++    L+D+L +           R+I R LLE + 
Sbjct: 68  SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVIC 125
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
            +H L ++H DLKPENIL      +K+ D+  + +                   +D G  
Sbjct: 126 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ-------------------LDPGEK 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGL------GWSYPCDMWSVGCILIELCSGEALFQTHE 325
             E      +  T  Y APE+I         G+    DMWS G I+  L +G   F   +
Sbjct: 167 LRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 220
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            +                ML+ +     +F   G  +W                      
Sbjct: 221 QM---------------LMLRMIMSGNYQF---GSPEW---------------------- 240
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                D  +  + DL+   L   P  R TA +AL HPFF +
Sbjct: 241 -----DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 37/224 (16%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDV-LELLKRYDRSGSRC 158
           RK+G G FG V    +R +G     +V+++I K R +  M +I+  +E+LK  D      
Sbjct: 28  RKLGSGAFGDVHLVEERSSGLE---RVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN--I 82
Query: 159 VQIRNWF-DYRNHICIVFEMLGPSLYDFLRKNNYR--PFPVDLVREIGRQLLECVAFMHD 215
           ++I   F DY N   ++    G  L + +     R        V E+ +Q++  +A+ H 
Sbjct: 83  IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STAYE 274
             ++H DLKPENILF                SP            S IK+IDFG +  ++
Sbjct: 143 QHVVHKDLKPENILF-------------QDTSP-----------HSPIKIIDFGLAELFK 178
Query: 275 HQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
             EH+     T  Y APEV      ++ CD+WS G ++  L +G
Sbjct: 179 SDEHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 134/342 (39%), Gaps = 83/342 (24%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELL 148
           ++T  Y++   IG+G F  V  C+   TG   A K++ + K   +  +    E  +  LL
Sbjct: 1   SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           K      S  V++ +         +VF+++ G  L++ +    Y     D    I +Q+L
Sbjct: 61  KH-----SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQIL 113
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E V   H + ++H DLKPEN+L  S                          K +A+K+ D
Sbjct: 114 EAVLHCHQMGVVHRDLKPENLLLASK------------------------CKGAAVKLAD 149
Query: 268 FG---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG       + Q       T  Y +PEV+    +  P D+W+ G IL  L  G   F   
Sbjct: 150 FGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDE 209
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
           +                QH L +        ++ G  D+P       +       P  +N
Sbjct: 210 D----------------QHKLYQQ-------IKAGAYDFPSPEWDTVT-------PEAKN 239
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           L+ Q               +L  +P+ R+TAH+ALKHP+  +
Sbjct: 240 LINQ---------------MLTINPAKRITAHEALKHPWVCQ 266

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 42/273 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-------REAAMTEIDVLELLK 149
           Y I  ++G G F  V  C ++ TG   A K ++  +         RE    E+ +L  + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
             +      + + + ++ R  + ++ E++ G  L+DFL +        +      +Q+L+
Sbjct: 74  HPN-----IITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V ++H  ++ H DLKPENI+ +    + IP                       IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           G  A+E +   E   I  T  + APE++         DMWS+G I   L SG + F    
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
             E LA +  V     +    +  + A+ F+R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 131/343 (38%), Gaps = 97/343 (28%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV----------RSIKKYREAAMTEIDVLELLKRYD 152
           +G G    V  C+ + T +  A+K++            +++ REA + E+D+L    R  
Sbjct: 25  LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL----RKV 80
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS-LYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 +Q+++ ++      +VF+++    L+D+L +           R+I R LLE + 
Sbjct: 81  SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVIC 138
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
            +H L ++H DLKPENIL                    D+N          IK+ DFG +
Sbjct: 139 ALHKLNIVHRDLKPENILL-----------------DDDMN----------IKLTDFGFS 171
Query: 272 AY--EHQEHNYIVSTRHYRAPEVILGL------GWSYPCDMWSVGCILIELCSGEALFQT 323
                 ++   +  T  Y APE+I         G+    DMWS G I+  L +G   F  
Sbjct: 172 CQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
            + +                ML+ +     +F   G  +W                    
Sbjct: 232 RKQM---------------LMLRMIMSGNYQF---GSPEW-------------------- 253
Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                  D  +  + DL+   L   P  R TA +AL HPFF +
Sbjct: 254 -------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 120/300 (40%), Gaps = 64/300 (21%)
Query: 69  AQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV 128
            Q+G P  +N   D   LF            L KIG+G+FG+V   +D  T + VAIK++
Sbjct: 6   VQSGLPGMQNLKADPEELFTK----------LEKIGKGSFGEVFKGIDNRTQKVVAIKII 55
Query: 129 --RSIKKYREAAMTEIDVLE------LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP 180
                +   E    EI VL       + K Y   GS     + W        I+ E LG 
Sbjct: 56  DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY---GSYLKDTKLW--------IIMEYLGG 104
Query: 181 -SLYDFLRKNNYRPFPVD--LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLK 237
            S  D L      P P+D   +  I R++L+ + ++H  + IH D+K  N+L      +K
Sbjct: 105 GSALDLLE-----PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 159
Query: 238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG 297
           + D+ V  +  TD                          + N  V T  + APEVI    
Sbjct: 160 LADFGVAGQL-TDTQI-----------------------KRNXFVGTPFWMAPEVIKQSA 195
Query: 298 WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
           +    D+WS+G   IEL  GE     H  L  + ++  +    P  +     KP ++FV 
Sbjct: 196 YDSKADIWSLGITAIELARGEP---PHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 252

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/338 (21%), Positives = 129/338 (38%), Gaps = 78/338 (23%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
             T  Y++   IG G++     C+ + T    A+K++   K+         + +E+L RY
Sbjct: 19  QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRY 72
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
            +     + +++ +D   ++ +V E++ G  L D + +  +  F       +   + + V
Sbjct: 73  GQH-PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTV 129
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H   ++H DLKP NIL+V                              +I++ DFG 
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDES-----------------------GNPESIRICDFGF 166
Query: 271 TAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
                 E+  +++   T ++ APEV+   G+   CD+WS+G +L  + +G   F      
Sbjct: 167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN---- 222
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
                     GP         D P E   R G   +        S+    K         
Sbjct: 223 ----------GPD--------DTPEEILARIGSGKFSLSGGYWNSVSDTAK--------- 255
Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                      DL+  +L  DP  RLTA   L+HP+  
Sbjct: 256 -----------DLVSKMLHVDPHQRLTAALVLRHPWIV 282

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 48/255 (18%)
Query: 70  QNG--TPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKV 127
           +NG  +  W+   +D   +F   E L          G G F +V+   ++ TG+  A+K 
Sbjct: 5   ENGESSSSWKKQAEDIKKIFEFKETL----------GTGAFSEVVLAEEKATGKLFAVKC 54
Query: 128 V--RSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYD 184
           +  +++K    +   EI VL  +K         V + + ++  NH+ +V +++ G  L+D
Sbjct: 55  IPKKALKGKESSIENEIAVLRKIKH-----ENIVALEDIYESPNHLYLVMQLVSGGELFD 109
Query: 185 FLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
            + +  +  +       + RQ+L+ V ++H + ++H DLKPEN+L+ S +          
Sbjct: 110 RIVEKGF--YTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQD---------- 157
Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPC 302
                         + S I + DFG +  E +    +    T  Y APEV+    +S   
Sbjct: 158 --------------EESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAV 203
Query: 303 DMWSVGCILIELCSG 317
           D WS+G I   L  G
Sbjct: 204 DCWSIGVIAYILLCG 218

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 94/227 (41%), Gaps = 45/227 (19%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLE-----LLKRYD 152
           L +IG+G+FG+V   +D  T E VAIK++     +   E    EI VL       + RY 
Sbjct: 24  LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRY- 82
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
             GS     + W        I+ E LG  S  D L+     P     +  I R++L+ + 
Sbjct: 83  -FGSYLKSTKLW--------IIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLD 130
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H  R IH D+K  N+L      +K+ D+ V                         G  
Sbjct: 131 YLHSERKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQL 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
                + N  V T  + APEVI    + +  D+WS+G   IEL  GE
Sbjct: 167 TDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 48/266 (18%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKRY 151
           Y+I++ +GEG+FG+V       TG+ VA+K++   K   ++ M      EI  L LL+  
Sbjct: 15  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRH- 72
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                  +++ +    ++ I +V E  G  L+D++ + +         R   +Q++  V 
Sbjct: 73  ----PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVE 126
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           + H  +++H DLKPEN+L      +KI D+ ++    TD N+ K             GS 
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSP 175
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELC--------SGEALFQ 322
            Y   E   ++S + Y  PEV          D+WS G IL + LC        S   LF+
Sbjct: 176 NYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFK 222
Query: 323 THENLEHLAMMERVLGPIPQHMLKRV 348
              N   +  + + L P    ++KR+
Sbjct: 223 NISN--GVYTLPKFLSPGAAGLIKRM 246

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 48/266 (18%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKRY 151
           Y+I++ +GEG+FG+V       TG+ VA+K++   K   ++ M      EI  L LL+  
Sbjct: 16  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRH- 73
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                  +++ +    ++ I +V E  G  L+D++ + +         R   +Q++  V 
Sbjct: 74  ----PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVE 127
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           + H  +++H DLKPEN+L      +KI D+ ++    TD N+ K             GS 
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSP 176
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELC--------SGEALFQ 322
            Y   E   ++S + Y  PEV          D+WS G IL + LC        S   LF+
Sbjct: 177 NYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFK 223
Query: 323 THENLEHLAMMERVLGPIPQHMLKRV 348
              N   +  + + L P    ++KR+
Sbjct: 224 NISN--GVYTLPKFLSPGAAGLIKRM 247

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++I+ ++G+G FG+V    ++ETG   A KV+ +  K  E     I  +E+L   D    
Sbjct: 13  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIET--KSEEELEDYIVEIEILATCDHP-- 68
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++   + +   + I+ E       D +     R      ++ + RQ+LE + F+H  
Sbjct: 69  YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R+IH DLK  N+L      +++ D+ V+A++               +K +         Q
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN---------------LKTL---------Q 164
Query: 277 EHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGE 318
           + +  + T ++ APEV++        + Y  D+WS+G  LIE+   E
Sbjct: 165 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++I+ ++G+G FG+V    ++ETG   A KV+ +  K  E     I  +E+L   D    
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIET--KSEEELEDYIVEIEILATCDHP-- 76
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
             V++   + +   + I+ E       D +     R      ++ + RQ+LE + F+H  
Sbjct: 77  YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           R+IH DLK  N+L      +++ D+ V+A++               +K +         Q
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN---------------LKTL---------Q 172
Query: 277 EHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGE 318
           + +  + T ++ APEV++        + Y  D+WS+G  LIE+   E
Sbjct: 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 48/266 (18%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKRY 151
           Y+I++ +GEG+FG+V       TG+ VA+K++   K   ++ M      EI  L LL+  
Sbjct: 10  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRH- 67
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                  +++ +    ++ I +V E  G  L+D++ + +         R   +Q++  V 
Sbjct: 68  ----PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVE 121
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           + H  +++H DLKPEN+L      +KI D+ ++    TD N+ K             GS 
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSP 170
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELC--------SGEALFQ 322
            Y   E   ++S + Y  PEV          D+WS G IL + LC        S   LF+
Sbjct: 171 NYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFK 217
Query: 323 THENLEHLAMMERVLGPIPQHMLKRV 348
              N   +  + + L P    ++KR+
Sbjct: 218 NISN--GVYTLPKFLSPGAAGLIKRM 241

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 48/266 (18%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKRY 151
           Y+I++ +GEG+FG+V       TG+ VA+K++   K   ++ M      EI  L LL+  
Sbjct: 6   YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRH- 63
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                  +++ +    ++ I +V E  G  L+D++ + +         R   +Q++  V 
Sbjct: 64  ----PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVE 117
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           + H  +++H DLKPEN+L      +KI D+ ++    TD N+ K             GS 
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSP 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELC--------SGEALFQ 322
            Y   E   ++S + Y  PEV          D+WS G IL + LC        S   LF+
Sbjct: 167 NYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFK 213
Query: 323 THENLEHLAMMERVLGPIPQHMLKRV 348
              N   +  + + L P    ++KR+
Sbjct: 214 NISN--GVYTLPKFLSPGAAGLIKRM 237

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 152/373 (40%), Gaps = 77/373 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR---EAAMTEIDVLELLKR-YD 152
           Y+I   IG G++G V    D+   + VAIK V  + +     +  + EI +L  LK  Y 
Sbjct: 30  YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL----VREIGRQLLE 208
                 +   +   + + + IV E+    L    +       P+ L    V+ I   LL 
Sbjct: 90  IRLHDLIIPEDLLKF-DELYIVLEIADSDLKKLFKT------PIFLTEQHVKTILYNLLL 142
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV--TARSPTDVNYYKRLPKSSAIKVI 266
              F+H+  +IH DLKP N L      +KI D+ +  T  S  D++    L +    +  
Sbjct: 143 GEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEP 202
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCS--------- 316
              +   + Q  +++V TR YRAPE+IL    ++   D+WS GCI  EL +         
Sbjct: 203 GPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNP 261
Query: 317 --------GEALF---------QTHE--NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
                   G + F         + HE  N + L ++  V+G  P+  LK +         
Sbjct: 262 TNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCI--------- 312
Query: 358 RGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL------IDLLQGLLRYDPSS 411
                     T +E IK +   P         +D S  Y       IDLL+ +LR++   
Sbjct: 313 ----------TKQEVIKYIKLFP-----TRDGIDLSKKYSSISKEGIDLLESMLRFNAQK 357
Query: 412 RLTAHDALKHPFF 424
           R+T   AL HP+ 
Sbjct: 358 RITIDKALSHPYL 370

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 137/343 (39%), Gaps = 81/343 (23%)
Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAM-TEIDVLEL 147
            E++   Y     +G G F +V+   D+ T + VAIK + +   + +E +M  EI VL  
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 72
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +K         V + + ++   H+ ++ +++ G  L+D + +  +     D  R I  Q+
Sbjct: 73  IKH-----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-ERDASRLI-FQV 125
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L+ V ++HDL ++H DLKPEN+L+ S                        L + S I + 
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMIS 161
Query: 267 DFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           DFG +  E      +    T  Y APEV+    +S   D WS+G I   L  G   F   
Sbjct: 162 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
            + +   + E++L            K   +F      D P      +S K          
Sbjct: 222 NDAK---LFEQIL------------KAEYEF------DSPYWDDISDSAK---------- 250
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                         D ++ L+  DP  R T   AL+HP+   D
Sbjct: 251 --------------DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 141/353 (39%), Gaps = 59/353 (16%)
Query: 86  LFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV-------RSIKKYREA- 137
           L A    + S Y + R I  G++G V   +D E G  VAIK V       R++    ++ 
Sbjct: 13  LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSF 71
Query: 138 ----AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRP 193
                + EI +L      +  G R + +       + + +V E++   L   +       
Sbjct: 72  LCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVI 131
Query: 194 FPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY 253
            P   ++     +L  +  +H+  ++H DL P NIL      + I D+ +      D N 
Sbjct: 132 SP-QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN- 189
Query: 254 YKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILI 312
                                     + V+ R YRAPE+++   G++   DMWS GC++ 
Sbjct: 190 ------------------------KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMA 225
Query: 313 ELCSGEALFQTHENLEHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRE 371
           E+ + +ALF+       L  +  V+G P  + ++      A  ++R    + P       
Sbjct: 226 EMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP------- 278
Query: 372 SIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                    R    V+   D  A   +DL+  +L ++P  R++   AL+HP+F
Sbjct: 279 --------ARAWTAVVPTADPVA---LDLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 141/353 (39%), Gaps = 59/353 (16%)
Query: 86  LFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV-------RSIKKYREA- 137
           L A    + S Y + R I  G++G V   +D E G  VAIK V       R++    ++ 
Sbjct: 13  LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSF 71
Query: 138 ----AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRP 193
                + EI +L      +  G R + +       + + +V E++   L   +       
Sbjct: 72  LCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVI 131
Query: 194 FPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY 253
            P   ++     +L  +  +H+  ++H DL P NIL      + I D+ +      D N 
Sbjct: 132 SP-QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN- 189
Query: 254 YKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILI 312
                                     + V+ R YRAPE+++   G++   DMWS GC++ 
Sbjct: 190 ------------------------KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMA 225
Query: 313 ELCSGEALFQTHENLEHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRE 371
           E+ + +ALF+       L  +  V+G P  + ++      A  ++R    + P       
Sbjct: 226 EMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP------- 278
Query: 372 SIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                    R    V+   D  A   +DL+  +L ++P  R++   AL+HP+F
Sbjct: 279 --------ARAWTAVVPTADPVA---LDLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 137/343 (39%), Gaps = 81/343 (23%)
Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAM-TEIDVLEL 147
            E++   Y     +G G F +V+   D+ T + VAIK + +   + +E +M  EI VL  
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +K         V + + ++   H+ ++ +++ G  L+D + +  +     D  R I  Q+
Sbjct: 73  IKH-----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-ERDASRLI-FQV 125
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L+ V ++HDL ++H DLKPEN+L+ S                        L + S I + 
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMIS 161
Query: 267 DFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           DFG +  E      +    T  Y APEV+    +S   D WS+G I   L  G   F   
Sbjct: 162 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
            + +   + E++L            K   +F      D P      +S K          
Sbjct: 222 NDAK---LFEQIL------------KAEYEF------DSPYWDDISDSAK---------- 250
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                         D ++ L+  DP  R T   AL+HP+   D
Sbjct: 251 --------------DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 157/366 (42%), Gaps = 66/366 (18%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR---EAAMTEIDVLELLKRYDR 153
           Y I   IG G++G V    D+ T + VAIK V  + +     +  + EI +L  LK    
Sbjct: 28  YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE----IGRQLLEC 209
                + I +     + + IV E+    L    +       P+ L  E    I   LL  
Sbjct: 88  IRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEEHIKTILYNLLLG 141
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV--TARSPTDVNYYKRLPKSSAIKVID 267
             F+H+  +IH DLKP N L      +K+ D+ +  T  S  D N    L ++       
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP-- 199
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCS---------- 316
             +   + Q  +++V TR YRAPE+IL    ++   D+WS GCI  EL +          
Sbjct: 200 -HNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPT 257
Query: 317 -------GEALF---------QTHE--NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
                  G + F         + HE  N + L ++  ++G   +  LK ++KP  + ++ 
Sbjct: 258 NRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKP--EVIKY 315
Query: 359 GRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDA 418
            +L +P     R+ I    K P + +          G  I+LL+ +L+++P+ R+T   A
Sbjct: 316 IKL-FPH----RKPINLKQKYPSISD---------DG--INLLESMLKFNPNKRITIDQA 359
Query: 419 LKHPFF 424
           L HP+ 
Sbjct: 360 LDHPYL 365

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 131/326 (40%), Gaps = 78/326 (23%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           KIGEG+ G V     R +G+ VA+K +   K+ R     E+   E++   D      V++
Sbjct: 81  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 136
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 193
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K ++IL      +K+ D+   A+   +V   K L                       
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 230
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
            V T ++ APE+I  L +    D+WS+G ++IE+  GE  +     L+ + M+       
Sbjct: 231 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 282
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
                              R + P               PRL+NL    V  S   L   
Sbjct: 283 -------------------RDNLP---------------PRLKNL--HKVSPS---LKGF 303
Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
           L  LL  DP+ R TA + LKHPF  +
Sbjct: 304 LDRLLVRDPAQRATAAELLKHPFLAK 329

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 142/354 (40%), Gaps = 94/354 (26%)
Query: 83  GHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR------------- 129
           G Y+      +   Y  +RK+G G +G+VL C ++      AIKV++             
Sbjct: 24  GMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDN 83
Query: 130 -SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLR 187
            +I+K+ E    EI +L+ L          +++ + F+ + +  +V E   G  L++ + 
Sbjct: 84  KNIEKFHEEIYNEISLLKSLDH-----PNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII 138
Query: 188 KNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS 247
             N   F       I +Q+L  + ++H   ++H D+KPENIL  +   L           
Sbjct: 139 --NRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSL----------- 185
Query: 248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMW 305
                          IK++DFG +++  +++     + T +Y APEV L   ++  CD+W
Sbjct: 186 -------------LNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVW 231
Query: 306 SVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE 365
           S G I+  L  G   F                G   Q ++K+V+K    F      D+ +
Sbjct: 232 SCGVIMYILLCGYPPFG---------------GQNDQDIIKKVEKGKYYF------DFND 270
Query: 366 GATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
                +  K ++KL                        +L YD + R TA +AL
Sbjct: 271 WKNISDEAKELIKL------------------------MLTYDYNKRCTAEEAL 300

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 137/343 (39%), Gaps = 81/343 (23%)
Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAM-TEIDVLEL 147
            E++   Y     +G G F +V+   D+ T + VAIK + +   + +E +M  EI VL  
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +K         V + + ++   H+ ++ +++ G  L+D + +  +     D  R I  Q+
Sbjct: 73  IKH-----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-ERDASRLI-FQV 125
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L+ V ++HDL ++H DLKPEN+L+ S                        L + S I + 
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMIS 161
Query: 267 DFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           DFG +  E      +    T  Y APEV+    +S   D WS+G I   L  G   F   
Sbjct: 162 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
            + +   + E++L            K   +F      D P      +S K          
Sbjct: 222 NDAK---LFEQIL------------KAEYEF------DSPYWDDISDSAK---------- 250
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                         D ++ L+  DP  R T   AL+HP+   D
Sbjct: 251 --------------DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 137/343 (39%), Gaps = 81/343 (23%)
Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAM-TEIDVLEL 147
            E++   Y     +G G F +V+   D+ T + VAIK + +   + +E +M  EI VL  
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +K         V + + ++   H+ ++ +++ G  L+D + +  +     D  R I  Q+
Sbjct: 73  IKH-----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-ERDASRLI-FQV 125
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L+ V ++HDL ++H DLKPEN+L+ S                        L + S I + 
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMIS 161
Query: 267 DFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           DFG +  E      +    T  Y APEV+    +S   D WS+G I   L  G   F   
Sbjct: 162 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
            + +   + E++L            K   +F      D P      +S K          
Sbjct: 222 NDAK---LFEQIL------------KAEYEF------DSPYWDDISDSAK---------- 250
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                         D ++ L+  DP  R T   AL+HP+   D
Sbjct: 251 --------------DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 130/326 (39%), Gaps = 78/326 (23%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           KIGEG+ G V     R +G+ VA+K +   K+ R     E+   E++   D      V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 213
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIH 270
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K ++IL      +K+ D+   A+   +V   K L                       
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 307
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
            V T ++ APE+I  L +    D+WS+G ++IE+  GE  +     L+ + M+       
Sbjct: 308 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 359
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
                              R + P               PRL+NL        +  L   
Sbjct: 360 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 380
Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
           L  LL  DP+ R TA + LKHPF  +
Sbjct: 381 LDRLLVRDPAQRATAAELLKHPFLAK 406

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 132/324 (40%), Gaps = 78/324 (24%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           KIGEG+ G V    ++ TG+ VA+K +   K+ R     E+   E++   D      V +
Sbjct: 52  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR----ELLFNEVVIMRDYHHDNVVDM 107
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
            + +   + + +V E L G +L D +          + +  +   +L  ++++H+  +IH
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHNQGVIH 164
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K ++IL  S   +K+ D+   A+   +V   K L                       
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL----------------------- 201
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
            V T ++ APEVI  L +    D+WS+G ++IE+  GE  +                   
Sbjct: 202 -VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY------------------- 241
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
                   ++P  + +RR R   P        + +VL+                G+L DL
Sbjct: 242 -------FNEPPLQAMRRIRDSLPPRVKDLHKVSSVLR----------------GFL-DL 277
Query: 401 LQGLLRYDPSSRLTAHDALKHPFF 424
              +L  +PS R TA + L HPF 
Sbjct: 278 ---MLVREPSQRATAQELLGHPFL 298

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 38/242 (15%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +Y    KIG+G  G V   +D  TG+ VAI+ +      ++    E+ + E+L   +   
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKN 76
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V   + +   + + +V E L G SL D + +          +  + R+ L+ + F+H
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALEFLH 133
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
             ++IH D+K +NIL                           L    ++K+ DFG  A  
Sbjct: 134 SNQVIHRDIKSDNIL---------------------------LGMDGSVKLTDFGFCAQI 166
Query: 274 --EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
             E  + + +V T ++ APEV+    +    D+WS+G + IE+  GE  +     L  L 
Sbjct: 167 TPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226
Query: 332 MM 333
           ++
Sbjct: 227 LI 228

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 130/326 (39%), Gaps = 78/326 (23%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           KIGEG+ G V     R +G+ VA+K +   K+ R     E+   E++   D      V++
Sbjct: 38  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 93
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 94  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 150
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K ++IL      +K+ D+   A+   +V   K L                       
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 187
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
            V T ++ APE+I  L +    D+WS+G ++IE+  GE  +     L+ + M+       
Sbjct: 188 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 239
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
                              R + P               PRL+NL        +  L   
Sbjct: 240 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 260
Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
           L  LL  DP+ R TA + LKHPF  +
Sbjct: 261 LDRLLVRDPAQRATAAELLKHPFLAK 286

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 111/269 (41%), Gaps = 54/269 (20%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLE------LLKRY 151
           L KIG+G+FG+V   +D  T + VAIK++     +   E    EI VL       + K Y
Sbjct: 12  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVD--LVREIGRQLLE 208
              GS     + W        I+ E LG  S  D L      P P+D   +  I R++L+
Sbjct: 72  ---GSYLKDTKLW--------IIMEYLGGGSALDLLE-----PGPLDETQIATILREILK 115
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H  + IH D+K  N+L      +K+ D+ V  +  TD                  
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQI--------------- 159
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
                   + N  V T  + APEVI    +    D+WS+G   IEL  GE     H  L 
Sbjct: 160 --------KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP---PHSELH 208
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
            + ++  +    P  +     KP ++FV 
Sbjct: 209 PMKVLFLIPKNNPPTLEGNYSKPLKEFVE 237

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 38/242 (15%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +Y    KIG+G  G V   +D  TG+ VAI+ +      ++    E+ + E+L   +   
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKN 76
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V   + +   + + +V E L G SL D + +          +  + R+ L+ + F+H
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALEFLH 133
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
             ++IH D+K +NIL                           L    ++K+ DFG  A  
Sbjct: 134 SNQVIHRDIKSDNIL---------------------------LGMDGSVKLTDFGFCAQI 166
Query: 274 --EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
             E  + + +V T ++ APEV+    +    D+WS+G + IE+  GE  +     L  L 
Sbjct: 167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226
Query: 332 MM 333
           ++
Sbjct: 227 LI 228

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 131/326 (40%), Gaps = 78/326 (23%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           KIGEG+ G V     R +G+ VA+K +   K+ R     E+   E++   D      V++
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 86
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 87  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 143
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K ++IL      +K+ D+   A+   +V   K L                       
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
            V T ++ APE+I  L +    D+WS+G ++IE+  GE  +                   
Sbjct: 181 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY------------------- 220
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
                   ++P  K ++  R + P               PRL+NL        +  L   
Sbjct: 221 -------FNEPPLKAMKMIRDNLP---------------PRLKNL-----HKVSPSLKGF 253
Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
           L  LL  DP+ R TA + LKHPF  +
Sbjct: 254 LDRLLVRDPAQRATAAELLKHPFLAK 279

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 134/344 (38%), Gaps = 85/344 (24%)
Query: 91  ENL--TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVL 145
           ENL   S Y++  ++G+G F  V  C+    G+  A K++ + K   +  +    E  + 
Sbjct: 16  ENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARIC 75
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGR 204
            LLK         V++ +      H  ++F+++ G  L++ +    Y     D    I +
Sbjct: 76  RLLKH-----PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-EADASHCI-Q 128
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+LE V   H + ++H DLKPEN+L  S                          K +A+K
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENLLLASK------------------------LKGAAVK 164
Query: 265 VIDFG---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
           + DFG       E Q       T  Y +PEV+    +  P D+W+ G IL  L  G   F
Sbjct: 165 LADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
              +                QH L +        ++ G  D+P       + +A      
Sbjct: 225 WDED----------------QHRLYQQ-------IKAGAYDFPSPEWDTVTPEAK----- 256
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                            DL+  +L  +PS R+TA +ALKHP+ +
Sbjct: 257 -----------------DLINKMLTINPSKRITAAEALKHPWIS 283

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 109/269 (40%), Gaps = 54/269 (20%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLE------LLKRY 151
           L KIG+G+FG+V   +D  T + VAIK++     +   E    EI VL       + K Y
Sbjct: 12  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVD--LVREIGRQLLE 208
              GS     + W        I+ E LG  S  D L      P P+D   +  I R++L+
Sbjct: 72  ---GSYLKDTKLW--------IIMEYLGGGSALDLLE-----PGPLDETQIATILREILK 115
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H  + IH D+K  N+L      +K+ D+ V                         
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------ 151
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           G       + N  V T  + APEVI    +    D+WS+G   IEL  GE     H  L 
Sbjct: 152 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP---PHSELH 208
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
            + ++  +    P  +     KP ++FV 
Sbjct: 209 PMKVLFLIPKNNPPTLEGNYSKPLKEFVE 237

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 38/242 (15%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +Y    KIG+G  G V   +D  TG+ VAI+ +      ++    E+ + E+L   +   
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKN 76
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V   + +   + + +V E L G SL D + +       +  V    R+ L+ + F+H
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 133
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
             ++IH D+K +NIL                           L    ++K+ DFG  A  
Sbjct: 134 SNQVIHRDIKSDNIL---------------------------LGMDGSVKLTDFGFCAQI 166
Query: 274 --EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
             E  + + +V T ++ APEV+    +    D+WS+G + IE+  GE  +     L  L 
Sbjct: 167 TPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226
Query: 332 MM 333
           ++
Sbjct: 227 LI 228

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 130/326 (39%), Gaps = 78/326 (23%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           KIGEG+ G V     R +G+ VA+K +   K+ R     E+   E++   D      V++
Sbjct: 36  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 91
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 92  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 148
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K ++IL      +K+ D+   A+   +V   K L                       
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 185
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
            V T ++ APE+I  L +    D+WS+G ++IE+  GE  +     L+ + M+       
Sbjct: 186 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 237
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
                              R + P               PRL+NL        +  L   
Sbjct: 238 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 258
Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
           L  LL  DP+ R TA + LKHPF  +
Sbjct: 259 LDRLLVRDPAQRATAAELLKHPFLAK 284

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 109/269 (40%), Gaps = 54/269 (20%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLE------LLKRY 151
           L KIG+G+FG+V   +D  T + VAIK++     +   E    EI VL       + K Y
Sbjct: 32  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVD--LVREIGRQLLE 208
              GS     + W        I+ E LG  S  D L      P P+D   +  I R++L+
Sbjct: 92  ---GSYLKDTKLW--------IIMEYLGGGSALDLLE-----PGPLDETQIATILREILK 135
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H  + IH D+K  N+L      +K+ D+ V                         
Sbjct: 136 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------ 171
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           G       + N  V T  + APEVI    +    D+WS+G   IEL  GE     H  L 
Sbjct: 172 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP---PHSELH 228
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
            + ++  +    P  +     KP ++FV 
Sbjct: 229 PMKVLFLIPKNNPPTLEGNYSKPLKEFVE 257

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 131/326 (40%), Gaps = 78/326 (23%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           KIGEG+ G V     R +G+ VA+K +   K+ R     E+   E++   D      V++
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 82
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 83  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 139
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K ++IL      +K+ D+   A+   +V   K L                       
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 176
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
            V T ++ APE+I  L +    D+WS+G ++IE+  GE  +                   
Sbjct: 177 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY------------------- 216
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
                   ++P  K ++  R + P               PRL+NL        +  L   
Sbjct: 217 -------FNEPPLKAMKMIRDNLP---------------PRLKNL-----HKVSPSLKGF 249
Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
           L  LL  DP+ R TA + LKHPF  +
Sbjct: 250 LDRLLVRDPAQRATAAELLKHPFLAK 275

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +Y    KIG+G  G V   +D  TG+ VAI+ +      ++    E+ + E+L   +   
Sbjct: 22  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKN 77
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V   + +   + + +V E L G SL D + +       +  V    R+ L+ + F+H
Sbjct: 78  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 134
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
             ++IH D+K +NIL                           L    ++K+ DFG  A  
Sbjct: 135 SNQVIHRDIKSDNIL---------------------------LGMDGSVKLTDFGFCAQI 167
Query: 274 --EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
             E  + + +V T ++ APEV+    +    D+WS+G + IE+  GE
Sbjct: 168 TPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 118/260 (45%), Gaps = 44/260 (16%)
Query: 95  SRYKILRKIGEGTFGQVL---DCLDRETGETVAIKVVR-SIKKYREAAMTEI--DVLELL 148
           S +++L+ +G+G+FG+V         ++G   A+KV++ +  K R+   T++  D+L   
Sbjct: 28  SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILA-- 85
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
              D +    V++   F     + ++ + L G  L+  L K     F  + V+    +L 
Sbjct: 86  ---DVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAELA 140
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             +  +H L +I+ DLKPENIL                           L +   IK+ D
Sbjct: 141 LGLDHLHSLGIIYRDLKPENIL---------------------------LDEEGHIKLTD 173
Query: 268 FGST--AYEHQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG +  A +H++  Y    T  Y APEV+   G S+  D WS G ++ E+ +G   FQ  
Sbjct: 174 FGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGK 233
Query: 325 ENLEHLAMMERVLGPIPQHM 344
           +  E + ++ +    +PQ +
Sbjct: 234 DRKETMTLILKAKLGMPQFL 253

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 136/316 (43%), Gaps = 54/316 (17%)
Query: 89  LGENLT-SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAA--MTEID 143
           LG  +T + ++ L+ +G+GTFG+V+   ++ TG   A+K+++   I    E A  +TE  
Sbjct: 1   LGSRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 60
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           VL+     +        ++  F   + +C V E   G  L+  L +   R F  D  R  
Sbjct: 61  VLQ-----NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFY 113
Query: 203 GRQLLECVAFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
           G +++  + ++H  + +++ DLK EN++     ++KI D+ +      D           
Sbjct: 114 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD----------- 162
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
                  G+T            T  Y APEV+    +    D W +G ++ E+  G   F
Sbjct: 163 -------GATM------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
Query: 322 --QTHENLEHLAMME-----RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIK 374
             Q HE L  L +ME     R LGP  + +L  + K   K     RL    G  S E  K
Sbjct: 210 YNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL----GGGS-EDAK 260
Query: 375 AVLKLPRLQNLVMQHV 390
            +++      +V QHV
Sbjct: 261 EIMQHRFFAGIVWQHV 276

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 49/241 (20%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K ++   K R         +EL  R     
Sbjct: 63  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARRE-------VELHWR----A 111
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 207
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCIL-IELCSGEALFQT 323
           FG  A E   HN + +   T +Y APEV+    +   CD WS+G I  I LC     +  
Sbjct: 208 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSN 266
Query: 324 H 324
           H
Sbjct: 267 H 267

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 31/220 (14%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           L +IG+G+FG+V   +D  T + VAIK++   +   E    + ++  +L + D   S   
Sbjct: 28  LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCD--SSYVT 84
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
           +    +   + + I+ E LG  S  D LR   +  F +  +    +++L+ + ++H  + 
Sbjct: 85  KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATML---KEILKGLDYLHSEKK 141
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH D+K  N+L      +K+ D+ V                         G       + 
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQIKR 177
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
           N  V T  + APEVI    +    D+WS+G   IEL  GE
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 134/316 (42%), Gaps = 53/316 (16%)
Query: 88  ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAA--MTEID 143
           A+     + ++ L+ +G+GTFG+V+   ++ TG   A+K+++   I    E A  +TE  
Sbjct: 2   AMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 61
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           VL+     +        ++  F   + +C V E   G  L+  L +   R F  D  R  
Sbjct: 62  VLQ-----NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFY 114
Query: 203 GRQLLECVAFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
           G +++  + ++H  + +++ DLK EN++     ++KI D+ +      D           
Sbjct: 115 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD----------- 163
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
                  G+T            T  Y APEV+    +    D W +G ++ E+  G   F
Sbjct: 164 -------GATM------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
Query: 322 --QTHENLEHLAMME-----RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIK 374
             Q HE L  L +ME     R LGP  + +L  + K   K     RL    G  S E  K
Sbjct: 211 YNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL----GGGS-EDAK 261
Query: 375 AVLKLPRLQNLVMQHV 390
            +++      +V QHV
Sbjct: 262 EIMQHRFFAGIVWQHV 277

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 125/337 (37%), Gaps = 78/337 (23%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
             T  Y++   IG G++     C+ + T    A+K+   I K +     EI   E+L RY
Sbjct: 19  QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKI---IDKSKRDPTEEI---EILLRY 72
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
            +     + +++ +D   ++ +V E+  G  L D + +  +  F       +   + + V
Sbjct: 73  GQH-PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF--FSEREASAVLFTITKTV 129
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H   ++H DLKP NIL+V                              +I++ DFG 
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDES-----------------------GNPESIRICDFGF 166
Query: 271 TAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
                 E+  + +   T ++ APEV+   G+   CD+WS+G +L    +G   F      
Sbjct: 167 AKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFAN---- 222
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
                     GP         D P E   R G   +        S+    K         
Sbjct: 223 ----------GPD--------DTPEEILARIGSGKFSLSGGYWNSVSDTAK--------- 255
Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                      DL+   L  DP  RLTA   L+HP+ 
Sbjct: 256 -----------DLVSKXLHVDPHQRLTAALVLRHPWI 281

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 50/276 (18%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++++  +G GT+GQV      +TG+  AIKV+       E    EI+   +LK+Y  S  
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEIN---MLKKY--SHH 80
Query: 157 RCVQI-------RNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLE 208
           R +         +N     + + +V E  G  S+ D ++         + +  I R++L 
Sbjct: 81  RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR 140
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            ++ +H  ++IH D+K +N+L                           L +++ +K++DF
Sbjct: 141 GLSHLHQHKVIHRDIKGQNVL---------------------------LTENAEVKLVDF 173
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEAL 320
           G +A   +     N  + T ++ APEVI         + +  D+WS+G   IE+  G   
Sbjct: 174 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFV 356
                 +  L ++ R   P P+   K+  K  + F+
Sbjct: 234 LCDMHPMRALFLIPR--NPAPRLKSKKWSKKFQSFI 267

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRS 154
           ++ILR +G G+FG+V     R  G   A+KV++   + + ++   T  + L L       
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML-----SI 62
Query: 155 GSRCVQIRNWFDYRN--HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
            +    IR W  +++   I ++ + + G  L+  LRK+   P PV   +    ++   + 
Sbjct: 63  VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV--AKFYAAEVCLALE 120
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H   +I+ DLKPENIL                           L K+  IK+ DFG  
Sbjct: 121 YLHSKDIIYRDLKPENIL---------------------------LDKNGHIKITDFGFA 153
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
            Y       +  T  Y APEV+    ++   D WS G ++ E+ +G   F
Sbjct: 154 KYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 53/309 (17%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAA--MTEIDVLELLKR 150
           + ++ L+ +G+GTFG+V+   ++ TG   A+K+++   I    E A  +TE  VL+    
Sbjct: 10  NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ---- 65
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
            +        ++  F   + +C V E   G  L+  L +   R F  D  R  G +++  
Sbjct: 66  -NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSA 122
Query: 210 VAFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
           + ++H  + +++ DLK EN++     ++KI D+ +      D                  
Sbjct: 123 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD------------------ 164
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHEN 326
           G+T            T  Y APEV+    +    D W +G ++ E+  G   F  Q HE 
Sbjct: 165 GATM------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 218
Query: 327 LEHLAMME-----RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
           L  L +ME     R LGP  + +L  + K   K     RL    G  S E  K +++   
Sbjct: 219 LFELILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL----GGGS-EDAKEIMQHRF 269
Query: 382 LQNLVMQHV 390
              +V QHV
Sbjct: 270 FAGIVWQHV 278

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 42/274 (15%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEID----VLEL 147
           ++   Y +   IG G++G+V   + + T      ++ R+ KK  +  + ++D     +E+
Sbjct: 23  DINQYYTLENTIGRGSWGEVKIAVQKGT------RIRRAAKKIPKYFVEDVDRFKQEIEI 76
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +K  D      +++   F+    I +V E+  G  L++  R  + R F       I + +
Sbjct: 77  MKSLDHPN--IIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDV 132
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L  VA+ H L + H DLKPEN LF++      PD                    S +K+I
Sbjct: 133 LSAVAYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLI 168
Query: 267 DFGSTA--YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           DFG  A     +     V T +Y +P+V+ GL +   CD WS G ++  L  G   F   
Sbjct: 169 DFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP 227
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
            + E +  +       P+     V   AE  +RR
Sbjct: 228 TDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 261

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 42/274 (15%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEID----VLEL 147
           ++   Y +   IG G++G+V   + + T      ++ R+ KK  +  + ++D     +E+
Sbjct: 6   DINQYYTLENTIGRGSWGEVKIAVQKGT------RIRRAAKKIPKYFVEDVDRFKQEIEI 59
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +K  D      +++   F+    I +V E+  G  L++  R  + R F       I + +
Sbjct: 60  MKSLDHPN--IIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDV 115
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L  VA+ H L + H DLKPEN LF++      PD                    S +K+I
Sbjct: 116 LSAVAYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLI 151
Query: 267 DFGSTA--YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           DFG  A     +     V T +Y +P+V+ GL +   CD WS G ++  L  G   F   
Sbjct: 152 DFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP 210
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
            + E +  +       P+     V   AE  +RR
Sbjct: 211 TDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 244

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 131/342 (38%), Gaps = 83/342 (24%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELL 148
           ++T  Y++  ++G+G F  V  C+   TG+  A K++ + K   +  +    E  +  LL
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           K         V++ +         +VF+++ G  L++ +    Y  +         +Q+L
Sbjct: 61  KH-----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQIL 113
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E V   H   ++H DLKPEN+L  S                          K +A+K+ D
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKS------------------------KGAAVKLAD 149
Query: 268 FG---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG       + Q       T  Y +PEV+    +  P DMW+ G IL  L  G   F   
Sbjct: 150 FGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDE 209
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
           +                QH L +        ++ G  D+P               P    
Sbjct: 210 D----------------QHRLYQQ-------IKAGAYDFPS--------------PEWDT 232
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           +  +          DL+  +L  +P+ R+TA +ALKHP+  +
Sbjct: 233 VTPEAK--------DLINKMLTINPAKRITASEALKHPWICQ 266

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +Y    KIG+G  G V   +D  TG+ VAI+ +      ++    E+ + E+L   +   
Sbjct: 22  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKN 77
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V   + +   + + +V E L G SL D + +       +  V    R+ L+ + F+H
Sbjct: 78  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 134
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
             ++IH ++K +NIL                           L    ++K+ DFG  A  
Sbjct: 135 SNQVIHRNIKSDNIL---------------------------LGMDGSVKLTDFGFCAQI 167
Query: 274 --EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
             E  + + +V T ++ APEV+    +    D+WS+G + IE+  GE
Sbjct: 168 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 53/309 (17%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAA--MTEIDVLELLKR 150
           + ++ L+ +G+GTFG+V+   ++ TG   A+K+++   I    E A  +TE  VL+    
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ---- 206
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
            +        ++  F   + +C V E   G  L+  L +   R F  D  R  G +++  
Sbjct: 207 -NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSA 263
Query: 210 VAFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
           + ++H  + +++ DLK EN++     ++KI D+ +      D                  
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD------------------ 305
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHEN 326
           G+T            T  Y APEV+    +    D W +G ++ E+  G   F  Q HE 
Sbjct: 306 GATM------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 359
Query: 327 LEHLAMME-----RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
           L  L +ME     R LGP  + +L  + K   K     RL    G  S E  K +++   
Sbjct: 360 LFELILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL----GGGS-EDAKEIMQHRF 410
Query: 382 LQNLVMQHV 390
              +V QHV
Sbjct: 411 FAGIVWQHV 419

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 53/309 (17%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAA--MTEIDVLELLKR 150
           + ++ L+ +G+GTFG+V+   ++ TG   A+K+++   I    E A  +TE  VL+    
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ---- 203
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
            +        ++  F   + +C V E   G  L+  L +   R F  D  R  G +++  
Sbjct: 204 -NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSA 260
Query: 210 VAFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
           + ++H  + +++ DLK EN++     ++KI D+ +      D                  
Sbjct: 261 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD------------------ 302
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHEN 326
           G+T            T  Y APEV+    +    D W +G ++ E+  G   F  Q HE 
Sbjct: 303 GATM------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 356
Query: 327 LEHLAMME-----RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
           L  L +ME     R LGP  + +L  + K   K     RL    G  S E  K +++   
Sbjct: 357 LFELILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL----GGGS-EDAKEIMQHRF 407
Query: 382 LQNLVMQHV 390
              +V QHV
Sbjct: 408 FAGIVWQHV 416

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 131/342 (38%), Gaps = 83/342 (24%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELL 148
           ++T  Y++  ++G+G F  V  C+   TG+  A K++ + K   +  +    E  +  LL
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           K         V++ +         +VF+++ G  L++ +    Y  +         +Q+L
Sbjct: 61  KH-----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQIL 113
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E V   H   ++H DLKPEN+L  S                          K +A+K+ D
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKS------------------------KGAAVKLAD 149
Query: 268 FG---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG       + Q       T  Y +PEV+    +  P DMW+ G IL  L  G   F   
Sbjct: 150 FGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDE 209
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
           +                QH L +        ++ G  D+P       + +A         
Sbjct: 210 D----------------QHRLYQQ-------IKAGAYDFPSPEWDTVTPEAK-------- 238
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                         DL+  +L  +P+ R+TA +ALKHP+  +
Sbjct: 239 --------------DLINKMLTINPAKRITASEALKHPWICQ 266

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 35/225 (15%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           +++ +R +G G+FG+V+    +ETG   A+K+   + K +   + +I+     KR  ++ 
Sbjct: 43  QFERIRTLGTGSFGRVMLVKHKETGNHYAMKI---LDKQKVVKLKQIEHTLNEKRIQQAV 99
Query: 156 SRCVQIRNWFDYRNH--ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
           +    ++  F ++++  + +V E   G  ++  LR+     F     R    Q++    +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H L LI+ DLKPEN+L     Y+K+ D+    R                      G T 
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------GRTW 197
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                   +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 198 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ IG G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTIGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-ML 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E M 
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYMP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+K+
Sbjct: 125 GGDMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
            D+    R                      G T         +  T  Y APE+IL  G+
Sbjct: 183 ADFGFAKRVK--------------------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ IG G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTIGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-ML 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E M 
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYMP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+K+
Sbjct: 125 GGDMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
            D+    R                      G T         +  T  Y APE+IL  G+
Sbjct: 183 ADFGFAKRVK--------------------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAM-TEIDVLELLKRY 151
           RY   R +G+G F +  +  D +T E  A KVV     +K +++  M TEI + + L   
Sbjct: 43  RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                  V    +F+  + + +V E+    SL +  ++      P    R   RQ ++ V
Sbjct: 100 --DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGV 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H+ R+IH DLK  N+       +KI D+ +  +                        
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK------------------------ 191
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
             ++ +    +  T +Y APEV+   G S+  D+WS+GCIL  L  G+  F+T    E  
Sbjct: 192 IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 251
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRR 358
             +++    +P+H    ++  A   +RR
Sbjct: 252 IRIKKNEYSVPRH----INPVASALIRR 275

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 115/275 (41%), Gaps = 36/275 (13%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK---VVRSIKKYREAAMTEIDVLELLKRYD 152
           +Y  L+KIGEG+FG+ +     E G    IK   + R   K RE +  E+ VL  +K  +
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 VQ R  F+    + IV +   G  L+  +       F  D + +   Q+   + 
Sbjct: 85  -----IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK 139
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
            +HD +++H D+K +NI       +++ D+ +     + V   +                
Sbjct: 140 HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC-------------- 185
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ--THENLEH 329
                     + T +Y +PE+     ++   D+W++GC+L ELC+ +  F+  + +NL  
Sbjct: 186 ----------IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV- 234
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP 364
           L ++     P+  H    +     +  +R   D P
Sbjct: 235 LKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRP 269

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAM-TEIDVLELLKRY 151
           RY   R +G+G F +  +  D +T E  A KVV     +K +++  M TEI + + L   
Sbjct: 43  RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                  V    +F+  + + +V E+    SL +  ++      P    R   RQ ++ V
Sbjct: 100 --DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGV 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H+ R+IH DLK  N+       +KI D+ +  +                        
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK------------------------ 191
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
             ++ +    +  T +Y APEV+   G S+  D+WS+GCIL  L  G+  F+T    E  
Sbjct: 192 IEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 251
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRR 358
             +++    +P+H    ++  A   +RR
Sbjct: 252 IRIKKNEYSVPRH----INPVASALIRR 275

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
           +  L+ +G+GTFG+V+   ++ TG   A+K++R    I K   A  +TE  VL+     +
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 61
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   ++  F   + +C V E   G  L+  L +   R F  +  R  G +++  + 
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H   +++ D+K EN++     ++KI D+ +     +D                  G+T
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 161
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 162 M------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 330 LAMMERVLGP 339
           L +ME +  P
Sbjct: 216 LILMEEIRFP 225

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
           +  L+ +G+GTFG+V+   ++ TG   A+K++R    I K   A  +TE  VL+     +
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 61
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   ++  F   + +C V E   G  L+  L +   R F  +  R  G +++  + 
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H   +++ D+K EN++     ++KI D+ +     +D                  G+T
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 161
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 162 M------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 330 LAMMERVLGP 339
           L +ME +  P
Sbjct: 216 LILMEEIRFP 225

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 37/262 (14%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY----REAAMTEIDVLELLKRYD 152
           ++  R +G+G FG+V  C  R TG+  A K +   +         A+ E  +LE      
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE------ 239
Query: 153 RSGSR-CVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           +  SR  V +   ++ ++ +C+V  ++ G  L   +       FP         ++   +
Sbjct: 240 KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
             +H  R+++ DLKPENIL     +++I D  +    P                      
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---------------------- 337
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
              E Q     V T  Y APEV+    +++  D W++GC+L E+ +G++ FQ  +     
Sbjct: 338 ---EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394
Query: 331 AMMERVLGPIPQHMLKRVDKPA 352
             +ER++  +P+   +R    A
Sbjct: 395 EEVERLVKEVPEEYSERFSPQA 416

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
           +  L+ +G+GTFG+V+   ++ TG   A+K++R    I K   A  +TE  VL+     +
Sbjct: 10  FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 64
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   ++  F   + +C V E   G  L+  L +   R F  +  R  G +++  + 
Sbjct: 65  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 122
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H   +++ D+K EN++     ++KI D+ +     +D                  G+T
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 164
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 165 M------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 218
Query: 330 LAMMERVLGP 339
           L +ME +  P
Sbjct: 219 LILMEEIRFP 228

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAM-TEIDVLELLKRY 151
           RY   R +G+G F +  +  D +T E  A KVV     +K +++  M TEI + + L   
Sbjct: 27  RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL--- 83
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                  V    +F+  + + +V E+    SL +  ++      P    R   RQ ++ V
Sbjct: 84  --DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGV 139
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H+ R+IH DLK  N+       +KI D+ +  +                        
Sbjct: 140 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK------------------------ 175
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
             ++ +    +  T +Y APEV+   G S+  D+WS+GCIL  L  G+  F+T    E  
Sbjct: 176 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 235
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRR 358
             +++    +P+H    ++  A   +RR
Sbjct: 236 IRIKKNEYSVPRH----INPVASALIRR 259

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+    +ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHKETGNHF 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 125 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAM-TEIDVLELLKRY 151
           RY   R +G+G F +  +  D +T E  A KVV     +K +++  M TEI + + L   
Sbjct: 43  RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                  V    +F+  + + +V E+    SL +  ++      P    R   RQ ++ V
Sbjct: 100 --DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGV 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H+ R+IH DLK  N+       +KI D+ +  +                        
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK------------------------ 191
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
             ++ +    +  T +Y APEV+   G S+  D+WS+GCIL  L  G+  F+T    E  
Sbjct: 192 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 251
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRR 358
             +++    +P+H    ++  A   +RR
Sbjct: 252 IRIKKNEYSVPRH----INPVASALIRR 275

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
           +  L+ +G+GTFG+V+   ++ TG   A+K++R    I K   A  +TE  VL+     +
Sbjct: 12  FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 66
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   ++  F   + +C V E   G  L+  L +   R F  +  R  G +++  + 
Sbjct: 67  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 124
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H   +++ D+K EN++     ++KI D+ +     +D                  G+T
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 167 M------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 220
Query: 330 LAMMERVLGP 339
           L +ME +  P
Sbjct: 221 LILMEEIRFP 230

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
           +  L+ +G+GTFG+V+   ++ TG   A+K++R    I K   A  +TE  VL+     +
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 61
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   ++  F   + +C V E   G  L+  L +   R F  +  R  G +++  + 
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H   +++ D+K EN++     ++KI D+ +     +D                  G+T
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 161
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 162 M------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 330 LAMMERVLGP 339
           L +ME +  P
Sbjct: 216 LILMEEIRFP 225

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
           +  L+ +G+GTFG+V+   ++ TG   A+K++R    I K   A  +TE  VL+     +
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 61
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   ++  F   + +C V E   G  L+  L +   R F  +  R  G +++  + 
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H   +++ D+K EN++     ++KI D+ +     +D                  G+T
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 161
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 162 M------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 330 LAMMERVLGP 339
           L +ME +  P
Sbjct: 216 LILMEEIRFP 225

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+    +ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHKETGNHF 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 125 GGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+    +ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHKETGNHF 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 125 GGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ IG G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTIGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+K+
Sbjct: 125 GGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
            D+    R                      G T         +  T  Y APE+IL  G+
Sbjct: 183 ADFGFAKRVK--------------------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
           +  L+ +G+GTFG+V+   ++ TG   A+K++R    I K   A  +TE  VL+     +
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 61
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   ++  F   + +C V E   G  L+  L +   R F  +  R  G +++  + 
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H   +++ D+K EN++     ++KI D+ +     +D                  G+T
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 161
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 162 M------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 330 LAMMERVLGP 339
           L +ME +  P
Sbjct: 216 LILMEEIRFP 225

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 37/262 (14%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY----REAAMTEIDVLELLKRYD 152
           ++  R +G+G FG+V  C  R TG+  A K +   +         A+ E  +LE      
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE------ 239
Query: 153 RSGSR-CVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           +  SR  V +   ++ ++ +C+V  ++ G  L   +       FP         ++   +
Sbjct: 240 KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
             +H  R+++ DLKPENIL     +++I D  +    P                      
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---------------------- 337
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
              E Q     V T  Y APEV+    +++  D W++GC+L E+ +G++ FQ  +     
Sbjct: 338 ---EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394
Query: 331 AMMERVLGPIPQHMLKRVDKPA 352
             +ER++  +P+   +R    A
Sbjct: 395 EEVERLVKEVPEEYSERFSPQA 416

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETG----ETVAIKVVR-SIKKYREAAMTEI--DVLEL 147
           S++++L+ +G+G+FG+V   + + +G    +  A+KV++ +  K R+   T++  D+L  
Sbjct: 24  SQFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL-- 80
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
               + +    V++   F     + ++ + L G  L+  L K     F  + V+    +L
Sbjct: 81  ---VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAEL 135
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
              +  +H L +I+ DLKPENIL     ++K+ D+ ++  S                  I
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKES------------------I 177
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           D    AY          T  Y APEV+   G +   D WS G ++ E+ +G   FQ  + 
Sbjct: 178 DHEKKAYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 231
Query: 327 LEHLAMMERVLGPIPQHM 344
            E + M+ +    +PQ +
Sbjct: 232 KETMTMILKAKLGMPQFL 249

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
           +++ ++ +G G+FG+V+    +ETG   A+K++   K    K  E  + E  +L+ +   
Sbjct: 63  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 119
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
             +    V++   F   +++ +V E + G  ++  LR+     F     R    Q++   
Sbjct: 120 --NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTF 175
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H L LI+ DLKPEN+L     Y+++          TD  + KR+           G 
Sbjct: 176 EYLHSLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GR 215
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           T         +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 216 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETG----ETVAIKVVR-SIKKYREAAMTEI--DVLEL 147
           S++++L+ +G+G+FG+V   + + +G    +  A+KV++ +  K R+   T++  D+L  
Sbjct: 24  SQFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL-- 80
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
               + +    V++   F     + ++ + L G  L+  L K     F  + V+    +L
Sbjct: 81  ---VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAEL 135
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
              +  +H L +I+ DLKPENIL     ++K+ D+ ++  S                  I
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKES------------------I 177
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           D    AY          T  Y APEV+   G +   D WS G ++ E+ +G   FQ  + 
Sbjct: 178 DHEKKAYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 231
Query: 327 LEHLAMMERVLGPIPQHM 344
            E + M+ +    +PQ +
Sbjct: 232 KETMTMILKAKLGMPQFL 249

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETG----ETVAIKVVR-SIKKYREAAMTEI--DVLEL 147
           S++++L+ +G+G+FG+V   + + +G    +  A+KV++ +  K R+   T++  D+L  
Sbjct: 25  SQFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL-- 81
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
               + +    V++   F     + ++ + L G  L+  L K     F  + V+    +L
Sbjct: 82  ---VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAEL 136
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
              +  +H L +I+ DLKPENIL     ++K+ D+ ++  S                  I
Sbjct: 137 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKES------------------I 178
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           D    AY          T  Y APEV+   G +   D WS G ++ E+ +G   FQ  + 
Sbjct: 179 DHEKKAYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 232
Query: 327 LEHLAMMERVLGPIPQHM 344
            E + M+ +    +PQ +
Sbjct: 233 KETMTMILKAKLGMPQFL 250

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
           +++ ++ +G G+FG+V+    +ETG   A+K++   K    K  E  + E  +L+ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
             +    V++   F   +++ +V E + G  ++  LR+     F     R    Q++   
Sbjct: 100 --NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H L LI+ DLKPEN+L     Y+++          TD  + KR+           G 
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GR 195
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           T         +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 196 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/340 (22%), Positives = 129/340 (37%), Gaps = 83/340 (24%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLK 149
            T  Y++  ++G+G F  V  C+    G+  A  ++ + K   +  +    E  +  LLK
Sbjct: 9   FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                    V++ +      H  ++F+++ G  L++ +    Y  +         +Q+LE
Sbjct: 69  H-----PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQILE 121
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V   H + ++H +LKPEN+L  S                          K +A+K+ DF
Sbjct: 122 AVLHCHQMGVVHRNLKPENLLLASK------------------------LKGAAVKLADF 157
Query: 269 G---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           G       E Q       T  Y +PEV+    +  P D+W+ G IL  L  G   F   +
Sbjct: 158 GLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED 217
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
                           QH L +        ++ G  D+P       + +A          
Sbjct: 218 ----------------QHRLYQQ-------IKAGAYDFPSPEWDTVTPEAK--------- 245
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                        DL+  +L  +PS R+TA +ALKHP+ +
Sbjct: 246 -------------DLINKMLTINPSKRITAAEALKHPWIS 272

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
           +++ ++ +G G+FG+V+    +ETG   A+K++   K    K  E  + E  +L+ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
             +    V++   F   +++ +V E + G  ++  LR+     F     R    Q++   
Sbjct: 100 --NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H L LI+ DLKPEN+L     Y+++          TD  + KR+           G 
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GR 195
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           T         +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 196 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
           +++ ++ +G G+FG+V+    +ETG   A+K++   K    K  E  + E  +L+ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
             +    V++   F   +++ +V E + G  ++  LR+     F     R    Q++   
Sbjct: 100 --NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H L LI+ DLKPEN+L     Y+++          TD  + KR+           G 
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GR 195
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           T         +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 196 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
           +++ ++ +G G+FG+V+    +ETG   A+K++   K    K  E  + E  +L+ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
             +    V++   F   +++ +V E   G  ++  LR+     F     R    Q++   
Sbjct: 100 --NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H L LI+ DLKPEN++     Y+K+          TD  + KR+           G 
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKV----------TDFGFAKRVK----------GR 195
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           T         +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 196 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 40/242 (16%)
Query: 89  LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDV 144
           +G N  + ++I +KIG G F +V        G  VA+K V+       K R   + EID+
Sbjct: 26  MGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL 85
Query: 145 LELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLR-----KNNYRPFPVDLV 199
           L+ L          ++    F   N + IV E+      D  R     K   R  P   V
Sbjct: 86  LKQLNH-----PNVIKYYASFIEDNELNIVLELADAG--DLSRMIKHFKKQKRLIPERTV 138
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
            +   QL   +  MH  R++H D+KP N+   +   +K+ D  +                
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG--------------- 183
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
               +     +TA      + +V T +Y +PE I   G+++  D+WS+GC+L E+ + ++
Sbjct: 184 ----RFFSSKTTA-----AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS 234
Query: 320 LF 321
            F
Sbjct: 235 PF 236

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 46/243 (18%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
           + +++++ RKIG G+FG++    + +T E VAIK + ++K      + E  +  +L+   
Sbjct: 5   VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVKTKHPQLLYESKIYRILQ--- 60
Query: 153 RSGSRCVQIRNWFDYR-NHICIVFEMLGPSLYDFLRKNNY--RPFPVDLVREIGRQLLEC 209
             G+    +R WF    ++  +V ++LGPSL D     N+  R   +  V  +  Q++  
Sbjct: 61  -GGTGIPNVR-WFGVEGDYNVLVMDLLGPSLEDLF---NFCSRKLSLKTVLMLADQMINR 115
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           V F+H    +H D+KP+N L                             +++ + +IDFG
Sbjct: 116 VEFVHSKSFLHRDIKPDNFLMGLGR------------------------RANQVYIIDFG 151
Query: 270 -------STAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
                  ++ ++H   +E+  +  T  Y +    LG+  S   D+ S+G +L+    G  
Sbjct: 152 LAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSL 211
Query: 320 LFQ 322
            +Q
Sbjct: 212 PWQ 214

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 133/329 (40%), Gaps = 88/329 (26%)
Query: 102 KIGEGTFGQVLDCLDRE--TGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSGSRC 158
           KIGEG+ G V  CL RE  +G  VA+K++   K+ R E    E+ ++   + ++      
Sbjct: 52  KIGEGSTGIV--CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN-----V 104
Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           V++   +     + ++ E L G +L D + +       +  V E    +L+ +A++H   
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCE---AVLQALAYLHAQG 161
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH D+K ++IL      +K+ D+   A+   DV   K L                    
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXL-------------------- 201
Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVL 337
               V T ++ APEVI    ++   D+WS+G ++IE+  GE  + +              
Sbjct: 202 ----VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS------------ 245
Query: 338 GPIPQHMLKRV-DKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG- 395
              P   +KR+ D P                            P+L+N       H    
Sbjct: 246 ---PVQAMKRLRDSPP---------------------------PKLKN------SHKVSP 269
Query: 396 YLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            L D L+ +L  DP  R TA + L HPF 
Sbjct: 270 VLRDFLERMLVRDPQERATAQELLDHPFL 298

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
           +++ ++ +G G+FG+V+    +ETG   A+K++   K    K  E  + E  +L+ +   
Sbjct: 35  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 91
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
             +    V++   F   +++ +V E + G  ++  LR+     F     R    Q++   
Sbjct: 92  --NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 147
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H L LI+ DLKPEN+L     Y+++          TD  + KR+           G 
Sbjct: 148 EYLHSLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GR 187
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           T         +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 188 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
           + L  +Y I   +G G FG V  C++  + +T   K V+     +     EI +L + + 
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH 60
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---QLL 207
            +      + +   F+    + ++FE +  S  D   + N   F ++  REI     Q+ 
Sbjct: 61  RN-----ILHLHESFESMEELVMIFEFI--SGLDIFERINTSAFELN-EREIVSYVHQVC 112
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + F+H   + H D++PENI++                         +  +SS IK+I+
Sbjct: 113 EALQFLHSHNIGHFDIRPENIIY-------------------------QTRRSSTIKIIE 147
Query: 268 FGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           FG         N+  + +   Y APEV      S   DMWS+G ++  L SG   F    
Sbjct: 148 FGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET 207
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
           N +   ++E ++                         + E A    SI+A          
Sbjct: 208 NQQ---IIENIMN--------------------AEYTFDEEAFKEISIEA---------- 234
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYR 430
                       +D +  LL  +  SR+TA +AL+HP+  +   R
Sbjct: 235 ------------MDFVDRLLVKERKSRMTASEALQHPWLKQKIER 267

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 67  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 121
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLH 179
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+  ++             
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVKGATWT----------- 218
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 219 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
           +++ ++ +G G+FG+V+    +ETG   A+K++   K    K  E  + E  +L+ +   
Sbjct: 35  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 91
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
             +    V++   F   +++ +V E + G  ++  LR+     F     R    Q++   
Sbjct: 92  --NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTF 147
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H L LI+ DLKPEN+L     Y+++          TD  + KR+           G 
Sbjct: 148 EYLHSLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GR 187
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           T         +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 188 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 198 ------LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 19  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 126 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+   +                   +  T  Y APE+IL  G+
Sbjct: 184 ----------TDFGFAKRVKGRTWT-----------------LCGTPEYLAPEIILSKGY 216
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 19  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 126 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 184 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 216
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 51/271 (18%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDV------LEL 147
           + +Y  +  +G G FG V   +D+E  + V +K ++  K   +  + +  +      + +
Sbjct: 23  SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           L R + +    +++ + F+ +    +V E  G  L  F   + +      L   I RQL+
Sbjct: 83  LSRVEHA--NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLV 140
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             V ++    +IH D+K ENI+                           + +   IK+ID
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIV---------------------------IAEDFTIKLID 173
Query: 268 FGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALF-QT 323
           FGS AY  +   +     T  Y APEV++G  +  P  +MWS+G  L  L   E  F + 
Sbjct: 174 FGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCEL 233
Query: 324 HENLEH------------LAMMERVLGPIPQ 342
            E +E             ++++  +L P+P+
Sbjct: 234 EETVEAAIHPPYLVSKELMSLVSGLLQPVPE 264

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 125 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 125 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 51/285 (17%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIR 162
           +G G FG V  C  +   + VAIK + S +  R+A + E   L  L R +        ++
Sbjct: 16  VGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVE---LRQLSRVNHPNI----VK 65
Query: 163 NWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC---VAFMHDLR- 217
            +    N +C+V E   G SLY+ L  +   P P           L+C   VA++H ++ 
Sbjct: 66  LYGACLNPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 218 --LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             LIH DLKP N+L V+                            + +K+ DFG TA + 
Sbjct: 124 KALIHRDLKPPNLLLVA--------------------------GGTVLKICDFG-TACDI 156
Query: 276 QEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
           Q H      +  + APEV  G  +S  CD++S G IL E+ +    F          M  
Sbjct: 157 QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA 216
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
              G  P  ++K + KP E  + R    W +  + R S++ ++K+
Sbjct: 217 VHNGTRPP-LIKNLPKPIESLMTRC---WSKDPSQRPSMEEIVKI 257

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 125 GGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 125 GGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 51/285 (17%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIR 162
           +G G FG V  C  +   + VAIK + S +  R+A + E   L  L R +        ++
Sbjct: 17  VGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVE---LRQLSRVNHPNI----VK 66
Query: 163 NWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC---VAFMHDLR- 217
            +    N +C+V E   G SLY+ L  +   P P           L+C   VA++H ++ 
Sbjct: 67  LYGACLNPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 218 --LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             LIH DLKP N+L V+                            + +K+ DFG TA + 
Sbjct: 125 KALIHRDLKPPNLLLVA--------------------------GGTVLKICDFG-TACDI 157
Query: 276 QEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
           Q H      +  + APEV  G  +S  CD++S G IL E+ +    F          M  
Sbjct: 158 QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA 217
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
              G  P  ++K + KP E  + R    W +  + R S++ ++K+
Sbjct: 218 VHNGTRPP-LIKNLPKPIESLMTRC---WSKDPSQRPSMEEIVKI 258

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 114/257 (44%), Gaps = 43/257 (16%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH--ICIVFEML-GP 180
           A+K+   + K +   + EI+     KR  ++ +    ++  F ++++  + +V E   G 
Sbjct: 70  AMKI---LDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG 126
Query: 181 SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD 240
            ++  LR+     F     R    Q++    ++H L LI+ DLKPEN++     Y+K+ D
Sbjct: 127 EMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTD 184
Query: 241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSY 300
           + +  R                      G T         +  T  Y APE+IL  G++ 
Sbjct: 185 FGLAKRVK--------------------GRTWX-------LCGTPEYLAPEIILSKGYNK 217
Query: 301 PCDMWSVGCILIELCSG 317
             D W++G ++ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E   
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYAP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN++     Y+K+
Sbjct: 125 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 4   FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 55
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 56  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 110
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 111 GGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 168
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+   +                   +  T  Y APE+IL  G+
Sbjct: 169 ----------TDFGFAKRVKGRTWT-----------------LCGTPEYLAPEIILSKGY 201
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 202 NKAVDWWALGVLIYEMAAG 220

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 125 GGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 19  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 126 GGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 184 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 216
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 198 ------LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E + 
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN+L     Y+++
Sbjct: 125 GGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E   
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYAP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN++     Y+K+
Sbjct: 125 GGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 39/234 (16%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G   F   E ++
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFAEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 47  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 101
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 159
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 198
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 199 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 67  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 121
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLH 179
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 218
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 219 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLKRYDRSG 155
           ++ILR IG+G+FG+V      +T +  A+K +   K   R         L++++  +   
Sbjct: 17  FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHP- 75
Query: 156 SRCVQIRNWFDYRNH---ICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                +  W+ +++      +V  +LG  L   L++N +  F  + V+    +L+  + +
Sbjct: 76  ---FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVMALDY 130
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           + + R+IH D+KP+NIL     ++ I D+ + A           LP+ + I         
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIAA----------MLPRETQITT------- 173
Query: 273 YEHQEHNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSG 317
                   +  T+ Y APE+     G G+S+  D WS+G    EL  G
Sbjct: 174 --------MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 33  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 87
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 88  PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 145
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQV----------TDFGFAKRVK----------GRTWX- 184
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 185 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 41  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 95
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 96  PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 153
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 192
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 193 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +    V++   F   +++ +V E   
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYAP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN++     Y+++
Sbjct: 125 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 19  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +     ++   F   +++ +V E   
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLTKLEFSFKDNSNLYMVMEYAP 125
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN++     Y+K+
Sbjct: 126 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 184 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 216
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 14  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 74  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 129
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH +L   NIL  +   +KI D+ +T   P D  YYK + P  S I       
Sbjct: 130 YLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI------- 182
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 183 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 211

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 114/257 (44%), Gaps = 43/257 (16%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 18  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH--ICIVFEML-GP 180
           A+K+   + K +   + EI+     KR  ++ +    ++  F ++++  + +V E   G 
Sbjct: 70  AMKI---LDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG 126
Query: 181 SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD 240
            ++  LR+     F     R    Q++    ++H L LI+ DLKPEN++     Y+++ D
Sbjct: 127 EMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTD 184
Query: 241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSY 300
           + +  R                      G T         +  T  Y APE+IL  G++ 
Sbjct: 185 FGLAKRVK--------------------GRTWX-------LCGTPEYLAPEIILSKGYNK 217
Query: 301 PCDMWSVGCILIELCSG 317
             D W++G ++ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 129/347 (37%), Gaps = 83/347 (23%)
Query: 87  FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEID 143
            A     T  Y++  ++G+G F  V  C+ +   +  A K++ + K   +  +    E  
Sbjct: 23  MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +  LLK         V++ +         +VF+++ G  L++ +    Y  +        
Sbjct: 83  ICRLLKH-----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHC 135
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
             Q+LE V  +H   ++H DLKPEN+L  S                          K +A
Sbjct: 136 IHQILESVNHIHQHDIVHRDLKPENLLLASK------------------------CKGAA 171
Query: 263 IKVIDFG---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           +K+ DFG       E Q       T  Y +PEV+    +  P D+W+ G IL  L  G  
Sbjct: 172 VKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYP 231
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F   +                QH L +        ++ G  D+P       +       
Sbjct: 232 PFWDED----------------QHKLYQQ-------IKAGAYDFPSPEWDTVT------- 261
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           P  +NL+ Q               +L  +P+ R+TA  ALKHP+  +
Sbjct: 262 PEAKNLINQ---------------MLTINPAKRITADQALKHPWVCQ 293

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 19  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +     ++   F   +++ +V E   
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLTKLEFSFKDNSNLYMVMEYAP 125
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN++     Y+K+
Sbjct: 126 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 184 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 216
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 40/238 (16%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           +RY++ RKIG G+FG +    D   GE VAIK +  +K        E  + ++++     
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKHPQLHIESKIYKMMQ----G 61
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
           G     IR      ++  +V E+LGPSL D     + R F +  V  +  Q++  + ++H
Sbjct: 62  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIH 120
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST--- 271
               IH D+KP+N L    +                        K + + +IDFG     
Sbjct: 121 SKNFIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAKKY 156
Query: 272 --AYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
             A  HQ     E+  +  T  Y +    LG+  S   D+ S+G +L+    G   +Q
Sbjct: 157 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 214

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 53/328 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV-RSIKKYREAAMT---EIDVLELLKRYD 152
           Y I   +GEG+FG+V      +T + VA+K + R + K  +  M    EI  L+LL+   
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH-- 68
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                 +++ +       I +V E  G  L+D++ +   +    D  R   +Q++  + +
Sbjct: 69  ---PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAIEY 123
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H  +++H DLKPEN+L      +KI D+ ++    TD N+ K    S            
Sbjct: 124 CHRHKIVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKTSCGSP----------- 171
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTH--ENL-- 327
                        +Y APEVI G  ++ P  D+WS G +L  +  G   F      NL  
Sbjct: 172 -------------NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK 218
Query: 328 ---EHLAMMERVLGPIPQHMLKR--VDKPAEKF----VRRG---RLDWPEGATSRESIKA 375
                + +M   L P  Q +++R  V  P ++     +RR     ++ P+     E ++ 
Sbjct: 219 KVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQG 278
Query: 376 VLKLPRLQNLVMQHVDHSAGYLIDLLQG 403
                R+ + + + +  S  Y+++ L+ 
Sbjct: 279 SYADSRIVSKLGEAMGFSEDYIVEALRS 306

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+IL  G++   D W++G ++ ++ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 40/252 (15%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           +RY++ RKIG G+FG +    D   GE VAIK +  +K        E  + ++++     
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKHPQLHIESKIYKMMQ----G 63
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
           G     IR      ++  +V E+LGPSL D     + R F +  V  +  Q++  + ++H
Sbjct: 64  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIH 122
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST--- 271
               IH D+KP+N L    +                        K + + +IDFG     
Sbjct: 123 SKNFIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAKKY 158
Query: 272 --AYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
             A  HQ     E+  +  T  Y +    LG+  S   D+ S+G +L+    G   +Q  
Sbjct: 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 218
Query: 325 ENLEHLAMMERV 336
           +        ER+
Sbjct: 219 KAATKRQKYERI 230

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 47/259 (18%)
Query: 64  FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
           F+    ++   +W N  ++  +L         +++ ++ +G G+FG+V+     ETG   
Sbjct: 19  FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
           A+K++   K    K  E  + E  +L+ +     +     ++   F   +++ +V E   
Sbjct: 71  AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLTKLEFSFKDNSNLYMVMEYAP 125
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           G  ++  LR+     F     R    Q++    ++H L LI+ DLKPEN++     Y+K+
Sbjct: 126 GGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
                     TD  + KR+           G T         +  T  Y APE+IL  G+
Sbjct: 184 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 216
Query: 299 SYPCDMWSVGCILIELCSG 317
           +   D W++G ++ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 45/244 (18%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV-RSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           +G+GT+G V    D      +AIK +     +Y +    EI + + LK         VQ 
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH-----KNIVQY 84
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIG---RQLLECVAFMHDLR 217
              F     I I  E + G SL   LR + + P   D  + IG   +Q+LE + ++HD +
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLR-SKWGPLK-DNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST---AYE 274
           ++H D+K +N+L                     +N Y     S  +K+ DFG++   A  
Sbjct: 143 IVHRDIKGDNVL---------------------INTY-----SGVLKISDFGTSKRLAGI 176
Query: 275 HQEHNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
           +        T  Y APE+I     G+    D+WS+GC +IE+ +G+  F  +E  E  A 
Sbjct: 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEPQAA 234
Query: 333 MERV 336
           M +V
Sbjct: 235 MFKV 238

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 103/250 (41%), Gaps = 37/250 (14%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           + RY  ++ IG G FG      D+ T E VA+K +      R AA+ E    E++     
Sbjct: 19  SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE-----RGAAIDENVQREIINHRSL 73
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V+ +       H+ I+ E   G  LY+  R  N   F  D  R   +QLL  V++
Sbjct: 74  RHPNIVRFKEVILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLLSGVSY 131
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG--S 270
            H +++ H DLK EN L                    D +   RL      K+ DFG   
Sbjct: 132 CHSMQICHRDLKLENTLL-------------------DGSPAPRL------KICDFGYSK 166
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQT-HENLE 328
           ++  H +    V T  Y APEV+L   +     D+WS G  L  +  G   F+   E  +
Sbjct: 167 SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD 226
Query: 329 HLAMMERVLG 338
           +   ++R+L 
Sbjct: 227 YRKTIQRILS 236

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 45/244 (18%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV-RSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           +G+GT+G V    D      +AIK +     +Y +    EI + + LK         VQ 
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH-----KNIVQY 70
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIG---RQLLECVAFMHDLR 217
              F     I I  E + G SL   LR + + P   D  + IG   +Q+LE + ++HD +
Sbjct: 71  LGSFSENGFIKIFMEQVPGGSLSALLR-SKWGPLK-DNEQTIGFYTKQILEGLKYLHDNQ 128
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST---AYE 274
           ++H D+K +N+L                     +N Y     S  +K+ DFG++   A  
Sbjct: 129 IVHRDIKGDNVL---------------------INTY-----SGVLKISDFGTSKRLAGI 162
Query: 275 HQEHNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
           +        T  Y APE+I     G+    D+WS+GC +IE+ +G+  F  +E  E  A 
Sbjct: 163 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEPQAA 220
Query: 333 MERV 336
           M +V
Sbjct: 221 MFKV 224

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN++     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y APE+I+  G++   D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 73  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D  ++K + P  S I       
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI------- 181
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 182 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T  Y AP +IL  G++   D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 4   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E + P   L+DF+ +        +L R   
Sbjct: 64  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG--ALQEELARSFF 120
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 154
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 155 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
Query: 322 QTHENL 327
           +  E +
Sbjct: 215 EHDEEI 220

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 98  KILRKIGEGTFGQV-LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K+ +K+G G FG+V +   ++ T   VA+K ++      EA + E +V++ L+       
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTLQH-----D 243
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + V++      +  I I+ E +   SL DFL+ +     P+  + +   Q+ E +AF+  
Sbjct: 244 KLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
              IH DL+  NIL  +    KI D+ + AR   D  Y  R      IK           
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIK----------- 350
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMME 334
                      + APE I    ++   D+WS G +L+E+ + G   +    N E +  +E
Sbjct: 351 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 399
Query: 335 R 335
           R
Sbjct: 400 R 400

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 97/236 (41%), Gaps = 36/236 (15%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           + RY++++ IG G FG      D+++ E VA+K +   +K  E    EI     +     
Sbjct: 17  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSL 71
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V+ +       H+ IV E   G  L++  R  N   F  D  R   +QL+  V++
Sbjct: 72  RHPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 129
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG--S 270
            H +++ H DLK EN L                 SP           +  +K+ DFG   
Sbjct: 130 CHAMQVCHRDLKLENTLLDG--------------SP-----------APRLKICDFGYSK 164
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHE 325
           ++  H +    V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 165 SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 35/220 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYDRSGSRC 158
           LR+IG G+FG V    D    E VAIK +  S K+  E     I  +  L++     +  
Sbjct: 59  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT-- 116
Query: 159 VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
           +Q R  +   +   +V E    S  D L  +  +P     +  +    L+ +A++H   +
Sbjct: 117 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNM 175
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH D+K  NIL   P                             +K+ DFGS +      
Sbjct: 176 IHRDVKAGNILLSEP---------------------------GLVKLGDFGSASI-MAPA 207
Query: 279 NYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELC 315
           N  V T ++ APEVIL +    +    D+WS+G   IEL 
Sbjct: 208 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 41/253 (16%)
Query: 88  ALGENLTSR-----YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAA 138
            +G N ++R     ++ +R +G+G+FG+V+    +ETG+  A+KV++     +    E  
Sbjct: 11  GIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECT 70
Query: 139 MTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVD 197
           MTE  +L L     R+     Q+   F   + +  V E + G  L   ++K+  R F   
Sbjct: 71  MTEKRILSLA----RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEA 124
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
             R    +++  + F+HD  +I+ DLK +N+L     + K+ D+ +              
Sbjct: 125 RARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG---------- 174
Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                  + +  +TA           T  Y APE++  + +    D W++G +L E+  G
Sbjct: 175 -------ICNGVTTA-------TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
Query: 318 EALFQTHENLEHL 330
            A F+  EN + L
Sbjct: 221 HAPFEA-ENEDDL 232

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 95/236 (40%), Gaps = 36/236 (15%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           + RY++++ IG G FG      D++  E VA+K +   +K  E    EI     +     
Sbjct: 18  SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-----INHRSL 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V+ +       H+ IV E   G  L++  R  N   F  D  R   +QL+  V++
Sbjct: 73  RHPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG--S 270
            H +++ H DLK EN L                 SP           +  +K+ DFG   
Sbjct: 131 AHAMQVAHRDLKLENTLLDG--------------SP-----------APRLKIADFGYSK 165
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHE 325
            +  H +    V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 166 ASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
           ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +     + 
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++    ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            L LI+ DLKPEN+L     Y+++          TD  + KR+           G T   
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +  T    APE+IL  G++   D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 75  QWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----S 130
           QW+N + + H          + + + R IG G FG+V  C   +TG+  A+K +      
Sbjct: 176 QWKNVELNIHLTM-------NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK 228
Query: 131 IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKN 189
           +K+    A+ E  +L L+   D     C+     F   + +  + +++ G  L+  L ++
Sbjct: 229 MKQGETLALNERIMLSLVSTGDCPFIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQH 286
Query: 190 NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
               F    +R    +++  +  MH+  +++ DLKP NIL     +++I D  +      
Sbjct: 287 GV--FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC---- 340
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVG 308
             ++ K+ P +S                    V T  Y APEV+  G+ +    D +S+G
Sbjct: 341 --DFSKKKPHAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 309 CILIELCSGEALFQTHEN 326
           C+L +L  G + F+ H+ 
Sbjct: 379 CMLFKLLRGHSPFRQHKT 396

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 75  QWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----S 130
           QW+N + + H          + + + R IG G FG+V  C   +TG+  A+K +      
Sbjct: 175 QWKNVELNIHLTM-------NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK 227
Query: 131 IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKN 189
           +K+    A+ E  +L L+   D     C+     F   + +  + +++ G  L+  L ++
Sbjct: 228 MKQGETLALNERIMLSLVSTGDCPFIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQH 285
Query: 190 NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
               F    +R    +++  +  MH+  +++ DLKP NIL     +++I D  +      
Sbjct: 286 GV--FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC---- 339
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVG 308
             ++ K+ P +S                    V T  Y APEV+  G+ +    D +S+G
Sbjct: 340 --DFSKKKPHAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLG 377
Query: 309 CILIELCSGEALFQTHEN 326
           C+L +L  G + F+ H+ 
Sbjct: 378 CMLFKLLRGHSPFRQHKT 395

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 35/220 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYDRSGSRC 158
           LR+IG G+FG V    D    E VAIK +  S K+  E     I  +  L++     +  
Sbjct: 20  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT-- 77
Query: 159 VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
           +Q R  +   +   +V E    S  D L  +  +P     +  +    L+ +A++H   +
Sbjct: 78  IQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH D+K  NIL   P                             +K+ DFGS +      
Sbjct: 137 IHRDVKAGNILLSEP---------------------------GLVKLGDFGSASI-MAPA 168
Query: 279 NYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELC 315
           N  V T ++ APEVIL +    +    D+WS+G   IEL 
Sbjct: 169 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 39  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 99  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 155
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 189
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 190 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
Query: 322 QTHENL 327
           +  E +
Sbjct: 250 EHDEEI 255

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 65  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 121
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 155
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 156 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
Query: 322 QTHENL 327
           +  E +
Sbjct: 216 EHDEEI 221

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 75  QWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----S 130
           QW+N + + H          + + + R IG G FG+V  C   +TG+  A+K +      
Sbjct: 176 QWKNVELNIHLTM-------NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK 228
Query: 131 IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKN 189
           +K+    A+ E  +L L+   D     C+     F   + +  + +++ G  L+  L ++
Sbjct: 229 MKQGETLALNERIMLSLVSTGDCPFIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQH 286
Query: 190 NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
               F    +R    +++  +  MH+  +++ DLKP NIL     +++I D  +      
Sbjct: 287 GV--FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC---- 340
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVG 308
             ++ K+ P +S                    V T  Y APEV+  G+ +    D +S+G
Sbjct: 341 --DFSKKKPHAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 309 CILIELCSGEALFQTHEN 326
           C+L +L  G + F+ H+ 
Sbjct: 379 CMLFKLLRGHSPFRQHKT 396

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 75  QWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----S 130
           QW+N + + H          + + + R IG G FG+V  C   +TG+  A+K +      
Sbjct: 176 QWKNVELNIHLTM-------NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK 228
Query: 131 IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKN 189
           +K+    A+ E  +L L+   D     C+     F   + +  + +++ G  L+  L ++
Sbjct: 229 MKQGETLALNERIMLSLVSTGDCPFIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQH 286
Query: 190 NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
               F    +R    +++  +  MH+  +++ DLKP NIL     +++I D  +      
Sbjct: 287 GV--FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC---- 340
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVG 308
             ++ K+ P +S                    V T  Y APEV+  G+ +    D +S+G
Sbjct: 341 --DFSKKKPHAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 309 CILIELCSGEALFQTHEN 326
           C+L +L  G + F+ H+ 
Sbjct: 379 CMLFKLLRGHSPFRQHKT 396

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 52  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 112 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 168
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 169 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 202
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 203 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
Query: 322 QTHENL 327
           +  E +
Sbjct: 263 EHDEEI 268

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 80  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 170
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 171 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 322 QTHENL 327
           +  E +
Sbjct: 231 EHDEEI 236

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 83/330 (25%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           +G+G F +  +  D +T E  A K+V     +K ++   M+    +E+      +    V
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS----MEISIHRSLAHQHVV 104
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
               +F+  + + +V E+    SL +  ++      P    R   RQ++    ++H  R+
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRNRV 162
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH DLK  N+       +KI D+ +  +                          Y+ +  
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATK------------------------VEYDGERK 198
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
             +  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T    E    +++   
Sbjct: 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 258
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
            IP+H+                   P  A+                              
Sbjct: 259 SIPKHI------------------NPVAAS------------------------------ 270
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            L+Q +L+ DP++R T ++ L   FFT  Y
Sbjct: 271 -LIQKMLQTDPTARPTINELLNDEFFTSGY 299

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 49/249 (19%)
Query: 81  KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
           +   ++       +  Y +  ++G+G F  V  C+ + TG   A K++ + K      ++
Sbjct: 15  RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK------LS 68
Query: 141 EIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI--------VFEML--GPSLYDFLRKNN 190
             D     ++ +R    C ++++    R H  I        VF+++  G    D + +  
Sbjct: 69  ARD----FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 124
Query: 191 YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
           Y     D    I +Q+LE +A+ H   ++H +LKPEN+L  S                  
Sbjct: 125 YSE--ADASHCI-QQILESIAYCHSNGIVHRNLKPENLLLASK----------------- 164
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVG 308
                   K +A+K+ DFG     +    +     T  Y +PEV+    +S P D+W+ G
Sbjct: 165 -------AKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 217
Query: 309 CILIELCSG 317
            IL  L  G
Sbjct: 218 VILYILLVG 226

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 80  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 170
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 171 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 322 QTHENL 327
           +  E +
Sbjct: 231 EHDEEI 236

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 19  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 79  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 135
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 169
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 170 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Query: 322 QTHENL 327
           +  E +
Sbjct: 230 EHDEEI 235

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 92  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 148
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 182
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 183 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 322 QTHENL 327
           +  E +
Sbjct: 243 EHDEEI 248

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 27  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 87  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 143
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 177
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 178 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 237
Query: 322 QTHENL 327
           +  E +
Sbjct: 238 EHDEEI 243

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 19  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 79  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 135
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 169
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 170 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Query: 322 QTHENL 327
           +  E +
Sbjct: 230 EHDEEI 235

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 83/330 (25%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           +G+G F +  +  D +T E  A K+V     +K ++   M+    +E+      +    V
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS----MEISIHRSLAHQHVV 102
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
               +F+  + + +V E+    SL +  ++      P    R   RQ++    ++H  R+
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRNRV 160
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH DLK  N+       +KI D+ +  +                          Y+ +  
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATK------------------------VEYDGERK 196
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
             +  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T    E    +++   
Sbjct: 197 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 256
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
            IP+H+                   P  A+                              
Sbjct: 257 SIPKHI------------------NPVAAS------------------------------ 268
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            L+Q +L+ DP++R T ++ L   FFT  Y
Sbjct: 269 -LIQKMLQTDPTARPTINELLNDEFFTSGY 297

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 47  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 107 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 163
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 197
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 198 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Query: 322 QTHENL 327
           +  E +
Sbjct: 258 EHDEEI 263

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 80  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 170
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 171 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 322 QTHENL 327
           +  E +
Sbjct: 231 EHDEEI 236

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 92  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 148
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 182
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 183 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 322 QTHENL 327
           +  E +
Sbjct: 243 EHDEEI 248

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 65  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 121
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 155
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 156 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
Query: 322 QTHENL 327
           +  E +
Sbjct: 216 EHDEEI 221

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 92  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 148
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 182
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 183 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 322 QTHENL 327
           +  E +
Sbjct: 243 EHDEEI 248

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 93  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 149
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 183
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 184 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 322 QTHENL 327
           +  E +
Sbjct: 244 EHDEEI 249

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 47  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 107 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 163
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 197
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 198 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Query: 322 QTHENL 327
           +  E +
Sbjct: 258 EHDEEI 263

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 93  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 149
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 183
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 184 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 322 QTHENL 327
           +  E +
Sbjct: 244 EHDEEI 249

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 93  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 149
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 183
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 184 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 322 QTHENL 327
           +  E +
Sbjct: 244 EHDEEI 249

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 92  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 148
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 182
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 183 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 322 QTHENL 327
           +  E +
Sbjct: 243 EHDEEI 248

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 133/339 (39%), Gaps = 66/339 (19%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVV-RSIKKYREAAMTEIDVLELLKRYDRS 154
           YK+  ++ GEG + +V   +  + G+  A+K++ +     R     E++ L     Y   
Sbjct: 14  YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETL-----YQCQ 68
Query: 155 GSRCV-QIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
           G++ + ++  +F+      +VFE L G S+   ++K  +  F       + R +   + F
Sbjct: 69  GNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDF 126
Query: 213 MHDLRLIHTDLKPENILFVSPEY---LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +H   + H DLKPENIL  SPE    +KI D+ +                 S +K ++  
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDL----------------GSGMK-LNNS 169
Query: 270 STAYEHQEHNYIVSTRHYRAPEVI-----LGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
            T     E      +  Y APEV+         +   CD+WS+G +L  + SG   F  H
Sbjct: 170 CTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH 229
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
              +       V       + + + +   +F  +   DW                     
Sbjct: 230 CGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDK---DWA-------------------- 266
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
               H+   A    DL+  LL  D   RL+A   L+HP+
Sbjct: 267 ----HISSEAK---DLISKLLVRDAKQRLSAAQVLQHPW 298

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 83/330 (25%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           +G+G F +  +  D +T E  A K+V     +K ++   M+    +E+      +    V
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS----MEISIHRSLAHQHVV 80
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
               +F+  + + +V E+    SL +  ++      P    R   RQ++    ++H  R+
Sbjct: 81  GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRNRV 138
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH DLK  N+       +KI D+ +  +                          Y+ +  
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATK------------------------VEYDGERK 174
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
             +  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T    E    +++   
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 234
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
            IP+H+                   P  A+                              
Sbjct: 235 SIPKHI------------------NPVAAS------------------------------ 246
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            L+Q +L+ DP++R T ++ L   FFT  Y
Sbjct: 247 -LIQKMLQTDPTARPTINELLNDEFFTSGY 275

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 83/330 (25%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           +G+G F +  +  D +T E  A K+V     +K ++   M+    +E+      +    V
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS----MEISIHRSLAHQHVV 80
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
               +F+  + + +V E+    SL +  ++      P    R   RQ++    ++H  R+
Sbjct: 81  GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRNRV 138
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH DLK  N+       +KI D+ +  +                          Y+ +  
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATK------------------------VEYDGERK 174
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
             +  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T    E    +++   
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 234
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
            IP+H+                   P  A+                              
Sbjct: 235 SIPKHI------------------NPVAAS------------------------------ 246
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            L+Q +L+ DP++R T ++ L   FFT  Y
Sbjct: 247 -LIQKMLQTDPTARPTINELLNDEFFTSGY 275

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 93  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 149
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 183
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 184 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 322 QTHENL 327
           +  E +
Sbjct: 244 EHDEEI 249

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 83/330 (25%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           +G+G F +  +  D +T E  A K+V     +K ++   M+    +E+      +    V
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS----MEISIHRSLAHQHVV 84
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
               +F+  + + +V E+    SL +  ++      P    R   RQ++    ++H  R+
Sbjct: 85  GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRNRV 142
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH DLK  N+       +KI D+ +  +                          Y+ +  
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATK------------------------VEYDGERK 178
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
             +  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T    E    +++   
Sbjct: 179 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 238
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
            IP+H+                   P  A+                              
Sbjct: 239 SIPKHI------------------NPVAAS------------------------------ 250
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            L+Q +L+ DP++R T ++ L   FFT  Y
Sbjct: 251 -LIQKMLQTDPTARPTINELLNDEFFTSGY 279

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 83/330 (25%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           +G+G F +  +  D +T E  A K+V     +K ++   M+    +E+      +    V
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS----MEISIHRSLAHQHVV 78
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
               +F+  + + +V E+    SL +  ++      P    R   RQ++    ++H  R+
Sbjct: 79  GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRNRV 136
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH DLK  N+       +KI D+ +  +                          Y+ +  
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATK------------------------VEYDGERK 172
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
             +  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T    E    +++   
Sbjct: 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 232
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
            IP+H+                   P  A+                              
Sbjct: 233 SIPKHI------------------NPVAAS------------------------------ 244
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            L+Q +L+ DP++R T ++ L   FFT  Y
Sbjct: 245 -LIQKMLQTDPTARPTINELLNDEFFTSGY 273

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 65  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 121
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 155
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 156 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
Query: 322 QTHENL 327
           +  E +
Sbjct: 216 EHDEEI 221

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 4   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 64  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 120
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 154
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 155 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
Query: 322 QTHENL 327
           +  E +
Sbjct: 215 EHDEEI 220

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 98  KILRKIGEGTFGQV-LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K+ +K+G G FG+V +   ++ T   VA+K ++      EA + E +V++ L+       
Sbjct: 18  KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTLQH-----D 70
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + V++      +  I I+ E +   SL DFL+ +     P+  + +   Q+ E +AF+  
Sbjct: 71  KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
              IH DL+  NIL  +    KI D+ + AR   D  Y  R      IK           
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIK----------- 177
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMME 334
                      + APE I    ++   D+WS G +L+E+ + G   +    N E +  +E
Sbjct: 178 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 226
Query: 335 R 335
           R
Sbjct: 227 R 227

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
           E L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+
Sbjct: 3   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
            LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R   
Sbjct: 63  -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 119
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+LE V   H+  ++H D+K ENIL                    D+N          +
Sbjct: 120 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 153
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
           K+IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F
Sbjct: 154 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 213
Query: 322 QTHENL 327
           +  E +
Sbjct: 214 EHDEEI 219

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 36/236 (15%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           + RY++++ IG G FG      D+++ E VA+K +   +K       EI     +     
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI-----INHRSL 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V+ +       H+ IV E   G  L++  R  N   F  D  R   +QL+  V++
Sbjct: 73  RHPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG--S 270
            H +++ H DLK EN L                 SP           +  +K+ DFG   
Sbjct: 131 CHAMQVCHRDLKLENTLLDG--------------SP-----------APRLKICDFGYSK 165
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHE 325
           ++  H +    V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 166 SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K LR++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 16  KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL ++L+K+  R   + L+ +   Q+ + + 
Sbjct: 76  IVKYKGV---CYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL-QYTSQICKGME 131
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 184
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 185 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 213

>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 44/253 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           YK+ R+IGEG+FG + +  +    + VAIK         E   ++   L    R  +  +
Sbjct: 11  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF--------EPRRSDAPQLRDEYRTYKLLA 62
Query: 157 RCVQIRNWFDYRN---HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            C  I N + +     H  +V ++LGPSL D L     R F V  V    +Q+L  V  +
Sbjct: 63  GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSI 121
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H+  L++ D+KP+N L   P                          ++ I V+DFG   +
Sbjct: 122 HEKSLVYRDIKPDNFLIGRPNS----------------------KNANMIYVVDFGMVKF 159
Query: 274 ----------EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
                      ++E   +  T  Y +    LG   S   D+ ++G + +    G   +Q 
Sbjct: 160 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 219
Query: 324 HENLEHLAMMERV 336
            +   +    ER+
Sbjct: 220 LKAATNKQKYERI 232

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 31  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 91  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 146
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 199
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 200 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 228

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 20  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 80  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 135
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 136 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 188
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 189 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 217

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 104 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 159
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 212
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 213 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 241

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 48/279 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
           Y++L+ IG+G F +V       TG+ VA+K++   +      +    E+ ++++L     
Sbjct: 9   YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH--- 65
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V++    +    + +V E   G  ++D+L  + +        R   RQ++  V +
Sbjct: 66  --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--MKEKEARAKFRQIVSAVQY 121
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H   ++H DLK EN+L  +   +KI D+  +                       FG+  
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE-------------------FTFGNKL 162
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
                 +    +  Y APE+  G  +  P  D+WS+G IL  L SG   F   +NL+ L 
Sbjct: 163 ------DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 215
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKFV-----RRGRLD 362
             ERVL     IP +M    +   +KF+     +RG L+
Sbjct: 216 --ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE 252

>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 44/253 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           YK+ R+IGEG+FG + +  +    + VAIK         E   ++   L    R  +  +
Sbjct: 12  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF--------EPRRSDAPQLRDEYRTYKLLA 63
Query: 157 RCVQIRNWFDYRN---HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            C  I N + +     H  +V ++LGPSL D L     R F V  V    +Q+L  V  +
Sbjct: 64  GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSI 122
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H+  L++ D+KP+N L   P                          ++ I V+DFG   +
Sbjct: 123 HEKSLVYRDIKPDNFLIGRPNS----------------------KNANMIYVVDFGMVKF 160
Query: 274 ----------EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
                      ++E   +  T  Y +    LG   S   D+ ++G + +    G   +Q 
Sbjct: 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 220
Query: 324 HENLEHLAMMERV 336
            +   +    ER+
Sbjct: 221 LKAATNKQKYERI 233

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 19  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 79  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 134
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 135 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 187
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 188 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 216

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 31  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 91  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 146
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 199
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 200 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 228

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 16  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 76  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 131
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 184
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 185 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 213

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 153/372 (41%), Gaps = 50/372 (13%)
Query: 81  KDGHYLFALGENLTSRYKILRKIGEGTFGQV-LDCLDRETG--ETVAIK-VVRSIKKYRE 136
           KD   L+     L++ +KI  KIGEGTF  V L     + G  E +A+K ++ +    R 
Sbjct: 7   KDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRI 66
Query: 137 AAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFP 195
           AA  E+  L +    D      + ++  F   +H+ I    L   S  D L   +++   
Sbjct: 67  AA--ELQCLTVAGGQDN----VMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE-- 118
Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS--PEYLKIPDYKVTARSPTDVNY 253
              VRE    L + +  +H   ++H D+KP N L+     +Y  +          T +  
Sbjct: 119 ---VREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIEL 175
Query: 254 YKRLPKSSAIKVIDFGSTAY---EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGC 309
            K +   +  +       +      Q+      T  +RAPEV+      +   DMWS G 
Sbjct: 176 LKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV 235
Query: 310 ILIELCSGE-ALFQTHENLEHLAMMERVLGP---------IPQHMLKRVDKPAEKFVRRG 359
           I + L SG    ++  ++L  LA +  + G            + +L   + PA+   +  
Sbjct: 236 IFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLC 295
Query: 360 -RLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY------LIDLLQGLLRYDPSSR 412
            RL   + +T           P+L + +  H  +  G+        DLL  LL  +P+SR
Sbjct: 296 ERLRGMDSST-----------PKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASR 344
Query: 413 LTAHDALKHPFF 424
           +TA +AL HPFF
Sbjct: 345 ITAEEALLHPFF 356

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 18  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 78  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 133
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 134 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 186
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 187 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 215

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 134/349 (38%), Gaps = 79/349 (22%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y++   IG G    V         E VAIK +       E   T +D  ELLK   ++ S
Sbjct: 17  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-----LEKCQTSMD--ELLKEI-QAMS 68
Query: 157 RC-----VQIRNWFDYRNHICIVFEML-GPSLYDFLR----KNNYRPFPVD--LVREIGR 204
           +C     V     F  ++ + +V ++L G S+ D ++    K  ++   +D   +  I R
Sbjct: 69  QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           ++LE + ++H    IH D+K  NIL      ++I D+ V+A   T               
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT--------------- 173
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQT 323
               G     ++     V T  + APEV+  + G+ +  D+WS G   IEL +G A +  
Sbjct: 174 ----GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229
Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
           +              P+   ML   + P              G   +E +K   K  R  
Sbjct: 230 YP-------------PMKVLMLTLQNDPP---------SLETGVQDKEMLKKYGKSFR-- 265
Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYRRF 432
                           ++   L+ DP  R TA + L+H FF +   + F
Sbjct: 266 ---------------KMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEF 299

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 96/235 (40%), Gaps = 34/235 (14%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           + RY++++ IG G FG      D+++ E VA+K +   +K  E    EI     +     
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSL 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V+ +       H+ IV E   G  L++  R  N   F  D  R   +QL+  V++
Sbjct: 73  RHPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 213 MHDLRLIHTDLKPENILF-VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
            H +++ H DLK EN L   SP     P  K+ A   +  +     PKS+          
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPA----PRLKICAFGYSKSSVLHSQPKST---------- 176
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHE 325
                     V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 177 ----------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 132/321 (41%), Gaps = 51/321 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
           Y++L+ IG+G F +V       TG  VAIK++   +      +    E+ ++++L     
Sbjct: 14  YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH--- 70
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V++    +    + ++ E   G  ++D+L  +          R   RQ++  V +
Sbjct: 71  --PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQY 126
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H  R++H DLK EN+L  +   +KI D+                          F +  
Sbjct: 127 CHQKRIVHRDLKAENLLLDADMNIKIADF-------------------------GFSNEF 161
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
               + +    +  Y APE+  G  +  P  D+WS+G IL  L SG   F   +NL+ L 
Sbjct: 162 TVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 220
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKF-----VRRGRLDWPEGATSRESIKAVLKLPRLQ 383
             ERVL     IP +M    +   ++F     ++RG L   E       I A  +   L+
Sbjct: 221 --ERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTL---EQIMKDRWINAGHEEDELK 275
Query: 384 NLVMQHVDHSAGYLIDLLQGL 404
             V   +D S    ID++ G+
Sbjct: 276 PFVEPELDISDQKRIDIMVGM 296

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 47/236 (19%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
            +  Y +  ++G+G F  V  C+ + TG   A K++ + K      ++  D     ++ +
Sbjct: 4   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK------LSARD----FQKLE 53
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG--------- 203
           R    C ++++    R H  I  E     ++D +       F   + RE           
Sbjct: 54  REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCI 111
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
           +Q+LE +A+ H   ++H +LKPEN+L  S                          K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 147
Query: 264 KVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           K+ DFG     +    +     T  Y +PEV+    +S P D+W+ G IL  L  G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT----EIDVLELLKRYD 152
           ++I++ IG G FG+V     + T    A+K++   +  + A       E DVL      +
Sbjct: 92  FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL-----VN 146
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   +   F   NH+ +V +  +G  L   L K   +  P D+ R    +++  + 
Sbjct: 147 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAID 205
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK-SSAIKVIDFGS 270
            +H L  +H D+KP+N+L                    DVN + RL    S +K+ D G+
Sbjct: 206 SIHQLHYVHRDIKPDNVLL-------------------DVNGHIRLADFGSCLKMNDDGT 246
Query: 271 TAYEHQEHNYIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILIELCSGEALFQTHE 325
                 + +  V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F    
Sbjct: 247 V-----QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 301
Query: 326 NLE 328
            +E
Sbjct: 302 LVE 304

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 11  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 71  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 126
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 127 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 179
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 180 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 208

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 73  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 181
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 182 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 12  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 72  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 127
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 128 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 180
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 181 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 209

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 17  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 77  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 132
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 133 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 185
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 186 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 214

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+K+  R   + L+ +   Q+ + + 
Sbjct: 73  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 181
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 182 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 67  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 38/244 (15%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVLEL 147
           L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+ L
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-L 60
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQ 205
           LK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R    Q
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQ 118
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +LE V   H+  ++H D+K ENIL                    D+N          +K+
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILI-------------------DLN-------RGELKL 152
Query: 266 IDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQT 323
           IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 153 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
Query: 324 HENL 327
            E +
Sbjct: 213 DEEI 216

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT----EIDVLELLKRYD 152
           ++I++ IG G FG+V     + T    A+K++   +  + A       E DVL      +
Sbjct: 76  FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL-----VN 130
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   +   F   NH+ +V +  +G  L   L K   +  P D+ R    +++  + 
Sbjct: 131 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAID 189
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK-SSAIKVIDFGS 270
            +H L  +H D+KP+N+L                    DVN + RL    S +K+ D G+
Sbjct: 190 SIHQLHYVHRDIKPDNVLL-------------------DVNGHIRLADFGSCLKMNDDGT 230
Query: 271 TAYEHQEHNYIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILIELCSGEALFQTHE 325
                 + +  V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F    
Sbjct: 231 V-----QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 285
Query: 326 NLE 328
            +E
Sbjct: 286 LVE 288

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 47/236 (19%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
            +  Y +  ++G+G F  V  C+ + TG   A K++ + K      ++  D     ++ +
Sbjct: 3   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK------LSARD----FQKLE 52
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG--------- 203
           R    C ++++    R H  I  E     ++D +       F   + RE           
Sbjct: 53  REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCI 110
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
           +Q+LE +A+ H   ++H +LKPEN+L  S                          K +A+
Sbjct: 111 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 146
Query: 264 KVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           K+ DFG     +    +     T  Y +PEV+    +S P D+W+ G IL  L  G
Sbjct: 147 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 47/236 (19%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
            +  Y +  ++G+G F  V  C+ + TG   A K++ + K      ++  D     ++ +
Sbjct: 4   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK------LSARD----FQKLE 53
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG--------- 203
           R    C ++++    R H  I  E     ++D +       F   + RE           
Sbjct: 54  REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCI 111
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
           +Q+LE +A+ H   ++H +LKPEN+L  S                          K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 147
Query: 264 KVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           K+ DFG     +    +     T  Y +PEV+    +S P D+W+ G IL  L  G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 66  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK---- 149
            S ++ +  +G+G FGQV+   +       AIK +R  ++     ++E+ +L  L     
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 150 -RYDRSGSRCVQIRNWFDYRNHI----------CIVFEML---GPSLYDFLRKNNYRPFP 195
            RY  +         W + RN +           +  +M      +LYD +   N     
Sbjct: 65  VRYYAA---------WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ-Q 114
Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
            D    + RQ+LE ++++H   +IH DLKP NI       +KI D+ +           K
Sbjct: 115 RDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------K 164
Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIEL 314
            + +S  I  +D  +           + T  Y A EV+ G G ++   DM+S+G I  E+
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 315 C 315
Sbjct: 225 I 225

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR--EAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V   +     E    EI + ++L   +  
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 66  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 160 ----ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 66  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR--EAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V   +     E    EI + ++L   +  
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 67  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 161 ----ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 38/244 (15%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVLEL 147
           L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+ L
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-L 60
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQ 205
           LK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R    Q
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQ 118
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +LE V   H+  ++H D+K ENIL                    D+N          +K+
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGELKL 152
Query: 266 IDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQT 323
           IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 153 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
Query: 324 HENL 327
            E +
Sbjct: 213 DEEI 216

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 40/254 (15%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
           + ++Y++ RKIG G+FG +    +  +GE VAIK +  +K        E    ++++   
Sbjct: 7   VGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIK-LECVKTKHPQLHIESKFYKMMQ--- 62
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
             G     I+      ++  +V E+LGPSL D     + R F +  V  +  Q++  + +
Sbjct: 63  -GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEY 120
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST- 271
           +H    IH D+KP+N L    +                        K + + +IDFG   
Sbjct: 121 IHSKNFIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAK 156
Query: 272 ----AYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
               A  HQ     E+  +  T  Y +    LG+  S   D+ S+G +L+    G   +Q
Sbjct: 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216
Query: 323 THENLEHLAMMERV 336
             +        ER+
Sbjct: 217 GLKAATKRQKYERI 230

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 131/321 (40%), Gaps = 51/321 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
           Y++L+ IG+G F +V       TG  VAIK++   +      +    E+ ++++L     
Sbjct: 17  YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH--- 73
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V++    +    + ++ E   G  ++D+L  +          R   RQ++  V +
Sbjct: 74  --PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQY 129
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H  R++H DLK EN+L  +   +KI D+                          F +  
Sbjct: 130 CHQKRIVHRDLKAENLLLDADMNIKIADF-------------------------GFSNEF 164
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
               + +       Y APE+  G  +  P  D+WS+G IL  L SG   F   +NL+ L 
Sbjct: 165 TVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 223
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKF-----VRRGRLDWPEGATSRESIKAVLKLPRLQ 383
             ERVL     IP +M    +   ++F     ++RG L   E       I A  +   L+
Sbjct: 224 --ERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTL---EQIMKDRWINAGHEEDELK 278
Query: 384 NLVMQHVDHSAGYLIDLLQGL 404
             V   +D S    ID++ G+
Sbjct: 279 PFVEPELDISDQKRIDIMVGM 299

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 38/244 (15%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVLEL 147
           L S+Y++   +G G FG V   +       VAIK V    I  + E        ++V+ L
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-L 60
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQ 205
           LK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R    Q
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQ 118
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +LE V   H+  ++H D+K ENIL                    D+N          +K+
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGELKL 152
Query: 266 IDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQT 323
           IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 153 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
Query: 324 HENL 327
            E +
Sbjct: 213 DEEI 216

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK---- 149
            S ++ +  +G+G FGQV+   +       AIK +R  ++     ++E+ +L  L     
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 150 -RYDRSGSRCVQIRNWFDYRNHI----------CIVFEML---GPSLYDFLRKNNYRPFP 195
            RY  +         W + RN +           +  +M      +LYD +   N     
Sbjct: 65  VRYYAA---------WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQ-Q 114
Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
            D    + RQ+LE ++++H   +IH DLKP NI       +KI D+ +           K
Sbjct: 115 RDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------K 164
Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIEL 314
            + +S  I  +D  +           + T  Y A EV+ G G ++   DM+S+G I  E+
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 315 C 315
Sbjct: 225 I 225

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 95/235 (40%), Gaps = 34/235 (14%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           + RY++++ IG G FG      D+++ E VA+K +   +K  E    EI     +     
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSL 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V+ +       H+ IV E   G  L++  R  N   F  D  R   +QL+  V++
Sbjct: 73  RHPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 213 MHDLRLIHTDLKPENILF-VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
            H +++ H DLK EN L   SP     P  K+ A                      +  +
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPA----PRLKICA--------------------FGYSKS 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHE 325
           +  H +    V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 167 SVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
           Y++L+ IG+G F +V       TG+ VA+K++   +      +    E+ ++++L     
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH--- 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V++    +    + +V E   G  ++D+L  +          R   RQ++  V +
Sbjct: 73  --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQY 128
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H   ++H DLK EN+L  +   +KI D+  +                       FG+  
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE-------------------FTFGNKL 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
                 +    +  Y APE+  G  +  P  D+WS+G IL  L SG   F   +NL+ L 
Sbjct: 170 ------DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 222
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKFV-----RRGRLD 362
             ERVL     IP +M    +   +KF+     +RG L+
Sbjct: 223 --ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE 259

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 67  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 67  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 67  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
           Y++L+ IG+G F +V       TG+ VA+K++   +      +    E+ ++++L     
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH--- 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V++    +    + +V E   G  ++D+L  +          R   RQ++  V +
Sbjct: 73  --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQY 128
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H   ++H DLK EN+L  +   +KI D+  +                       FG+  
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE-------------------FTFGNKL 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
                 +    +  Y APE+  G  +  P  D+WS+G IL  L SG   F   +NL+ L 
Sbjct: 170 ------DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 222
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKFV-----RRGRLD 362
             ERVL     IP +M    +   +KF+     +RG L+
Sbjct: 223 --ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE 259

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 26  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 78
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 79  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D  Y  R      IK            
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 185
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 186 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 235
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 236 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 113/278 (40%), Gaps = 45/278 (16%)
Query: 81  KDGHYLFALGENLTSRYKILRKIGE---GTFGQVLDCLDRETGETVAIKVVRSIKKYREA 137
           K   YL   G+   +    L  +GE   GT GQV     R+TG  +A+K +R      E 
Sbjct: 8   KQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEEN 67
Query: 138 AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
               +D+  +LK +D      VQ    F     + I  E++G +  + L+K    P P  
Sbjct: 68  KRILMDLDVVLKSHD--CPYIVQCFGTFITNTDVFIAMELMG-TCAEKLKKRMQGPIP-- 122
Query: 198 LVREIGRQLLECVAFMHDLR----LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY 253
             R +G+  +  V  ++ L+    +IH D+KP NIL      +K+ D+ ++ R   D   
Sbjct: 123 -ERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD--- 178
Query: 254 YKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP-----CDMWSVG 308
                                 +  +       Y APE I     + P      D+WS+G
Sbjct: 179 ----------------------KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLG 216
Query: 309 CILIELCSGEALFQT-HENLEHLAMMERVLGP-IPQHM 344
             L+EL +G+  ++    + E L  + +   P +P HM
Sbjct: 217 ISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM 254

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR--EAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V   +     E    EI + ++L   +  
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 66  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 160 ----ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/341 (22%), Positives = 130/341 (38%), Gaps = 108/341 (31%)
Query: 97  YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           YK+  ++ G G  G+VL   ++ T E  A+K+++   K R         +EL  R     
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 67
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           S+C  I        N +  R  + IV E L G  L+  ++    + F      EI + + 
Sbjct: 68  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H + + H D+KPEN+L+             T++ P  +           +K+ D
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 163
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
           FG                   A E   G  +   CDMWS+G I+  L  G   F ++  L
Sbjct: 164 FGF------------------AKETT-GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 204
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRLQNL 385
                       I   M  R        +R G+ ++  PE +   E +K           
Sbjct: 205 -----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM---------- 235
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                         L++ LL+ +P+ R+T  + + HP+  +
Sbjct: 236 --------------LIRNLLKTEPTQRMTITEFMNHPWIMQ 262

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
           Y++L+ IG+G F +V       TG+ VA++++   +      +    E+ ++++L     
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH--- 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V++    +    + +V E   G  ++D+L  +          R   RQ++  V +
Sbjct: 73  --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQY 128
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H   ++H DLK EN+L  +   +KI D+  +                       FG+  
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE-------------------FTFGNKL 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
            E         +  Y APE+  G  +  P  D+WS+G IL  L SG   F   +NL+ L 
Sbjct: 170 DE------FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 222
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKFV-----RRGRLD 362
             ERVL     IP +M    +   +KF+     +RG L+
Sbjct: 223 --ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE 259

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 66  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 160 ----ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 48/279 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
           Y++L+ IG+G F +V       TG+ VA+K++   +      +    E+ ++++L     
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH--- 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V++    +    + +V E   G  ++D+L  +          R   RQ++  V +
Sbjct: 73  --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQY 128
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H   ++H DLK EN+L  +   +KI D+  +                       FG+  
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE-------------------FTFGNKL 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
                 +       Y APE+  G  +  P  D+WS+G IL  L SG   F   +NL+ L 
Sbjct: 170 ------DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 222
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKFV-----RRGRLD 362
             ERVL     IP +M    +   +KF+     +RG L+
Sbjct: 223 --ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE 259

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 66  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 67  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 66  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 11  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 64  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D  Y  R      IK            
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 170
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 171 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 220
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 221 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 7   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 64
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 65  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 116
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 117 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 158
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 159 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 66  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 25/232 (10%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE-AAMTEIDVLELLKRYDRS 154
           R ++ R + EG F  V +  D  +G   A+K + S ++ +  A + E+  ++ L  +   
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 155 GSRC----VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYR-PFPVDLVREIGRQLLEC 209
              C    +        +    ++ E+    L +FL+K   R P   D V +I  Q    
Sbjct: 89  VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 210 VAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           V  MH  +  +IH DLK EN+L  +   +K+ D+     S T +++Y     S+  + + 
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG----SATTISHYPDYSWSAQRRAL- 203
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPC----DMWSVGCILIELC 315
                 E    N   +T  YR PE+I  L  ++P     D+W++GCIL  LC
Sbjct: 204 ----VEEEITRN---TTPMYRTPEII-DLYSNFPIGEKQDIWALGCILYLLC 247

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 67  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 90  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG--SFDETCTRFYTAEIVSA 144
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++     S   D+W++GCI+ +L +G
Sbjct: 183 SPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 22  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 74
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 75  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D  Y  R      IK            
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 181
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 182 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 232 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 66  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 160 ----ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           ++G G+FG+V    D++TG   A+K VR ++ +R          EL+     +  R V +
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAE--------ELMACAGLTSPRIVPL 150
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                    + I  E+L G SL   +++      P D       Q LE + ++H  R++H
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K +N+L  S           +  +  D  +   L      K +  G         +Y
Sbjct: 209 GDVKADNVLLSS---------DGSHAALCDFGHAVCLQPDGLGKSLLTG---------DY 250
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           I  T  + APEV+LG       D+WS  C+++ + +G
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 132/343 (38%), Gaps = 79/343 (23%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y++   IG G    V         E VAIK +       E   T +D  ELLK   ++ S
Sbjct: 12  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-----LEKCQTSMD--ELLKEI-QAMS 63
Query: 157 RC-----VQIRNWFDYRNHICIVFEML-GPSLYDFLR----KNNYRPFPVD--LVREIGR 204
           +C     V     F  ++ + +V ++L G S+ D ++    K  ++   +D   +  I R
Sbjct: 64  QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           ++LE + ++H    IH D+K  NIL      ++I D+ V+A   T               
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT--------------- 168
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQT 323
               G     ++     V T  + APEV+  + G+ +  D+WS G   IEL +G A +  
Sbjct: 169 ----GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 224
Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
           +              P+   ML   + P              G   +E +K   K  R  
Sbjct: 225 YP-------------PMKVLMLTLQNDPP---------SLETGVQDKEMLKKYGKSFR-- 260
Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                           ++   L+ DP  R TA + L+H FF +
Sbjct: 261 ---------------KMISLCLQKDPEKRPTAAELLRHKFFQK 288

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 66  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 66  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 16  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 68
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 69  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D  Y  R      IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 175
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 104/245 (42%), Gaps = 47/245 (19%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETV--AIKVV--RSIKKYREAA--MTEIDVLELL 148
           S +  L+ IG+G+FG+VL  L R   E V  A+KV+  ++I K +E    M+E +VL  L
Sbjct: 38  SDFHFLKVIGKGSFGKVL--LARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL--L 93
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           K         V +   F   + +  V + + G  L+  L++   R F     R    ++ 
Sbjct: 94  KNVKHP--FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIA 149
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++H L +++ DLKPENIL                           L     I + D
Sbjct: 150 SALGYLHSLNIVYRDLKPENIL---------------------------LDSQGHIVLTD 182
Query: 268 FGSTAYEHQEHNYIVS----TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
           FG    E+ EHN   S    T  Y APEV+    +    D W +G +L E+  G   F +
Sbjct: 183 FG-LCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 241
Query: 324 HENLE 328
               E
Sbjct: 242 RNTAE 246

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI +  +L   +  
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 67  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y IL++IG G   +V   L+ E  +  AIK V   +   +   +  + +  L +  +   
Sbjct: 58  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
           + +++ ++     +I +V E     L  +L+K  +  P+     +   + +LE V  +H 
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 173
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             ++H+DLKP N L V    LK+ D+ +  +   D         +S +K           
Sbjct: 174 HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT--------TSVVK----------- 213
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
              +  V T +Y  PE I  +  S              D+WS+GCIL  +  G+  FQ  
Sbjct: 214 ---DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 268
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
           + +  ++ +  ++ P        IP+  L+ V K   K   + R+  PE
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 21  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 73
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 74  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D  Y  R      IK            
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 180
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 181 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 230
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 231 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 30/217 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           ++G G+FG+V    D++TG   A+K VR ++ +R        V EL+     S  R V +
Sbjct: 81  RVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFR--------VEELVACAGLSSPRIVPL 131
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                    + I  E+L G SL   +++      P D       Q LE + ++H  R++H
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRILH 189
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K +N+L  S           +  +  D  +   L      K +  G         +Y
Sbjct: 190 GDVKADNVLLSS---------DGSRAALCDFGHALCLQPDGLGKSLLTG---------DY 231
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           I  T  + APEV++G       D+WS  C+++ + +G
Sbjct: 232 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
           Y++L+ IG+G F +V       TG+ VA++++   +      +    E+ ++++L     
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH--- 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V++    +    + +V E   G  ++D+L  +          R   RQ++  V +
Sbjct: 73  --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQY 128
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H   ++H DLK EN+L  +   +KI D+  +                       FG+  
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE-------------------FTFGNKL 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
                 +    +  Y APE+  G  +  P  D+WS+G IL  L SG   F   +NL+ L 
Sbjct: 170 ------DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 222
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKFV-----RRGRLD 362
             ERVL     IP +M    +   +KF+     +RG L+
Sbjct: 223 --ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE 259

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 30/217 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           ++G G+FG+V    D++TG   A+K VR ++ +R        V EL+     S  R V +
Sbjct: 65  RVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFR--------VEELVACAGLSSPRIVPL 115
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                    + I  E+L G SL   +++      P D       Q LE + ++H  R++H
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K +N+L  S           +  +  D  +   L      K +  G         +Y
Sbjct: 174 GDVKADNVLLSS---------DGSRAALCDFGHALCLQPDGLGKSLLTG---------DY 215
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           I  T  + APEV++G       D+WS  C+++ + +G
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 46/225 (20%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           ++G G+FG+V    D++TG   A+K VR ++ +R          EL+     +  R V +
Sbjct: 81  RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAE--------ELMACAGLTSPRIVPL 131
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                    + I  E+L G SL   +++      P D       Q LE + ++H  R++H
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--- 277
            D+K +N+L  S                            S   + DFG       +   
Sbjct: 190 GDVKADNVLLSS--------------------------DGSHAALCDFGHAVCLQPDGLG 223
Query: 278 -----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 +YI  T  + APEV+LG       D+WS  C+++ + +G
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 30/217 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           ++G G+FG+V    D++TG   A+K VR ++ +R        V EL+     S  R V +
Sbjct: 79  RLGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFR--------VEELVACAGLSSPRIVPL 129
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                    + I  E+L G SL   +++      P D       Q LE + ++H  R++H
Sbjct: 130 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            D+K +N+L  S           +  +  D  +   L      K +  G         +Y
Sbjct: 188 GDVKADNVLLSS---------DGSRAALCDFGHALCLQPDGLGKSLLTG---------DY 229
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           I  T  + APEV++G       D+WS  C+++ + +G
Sbjct: 230 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 50/244 (20%)
Query: 98  KILRKIGEGTFGQV-LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K+ +K+G G FG+V +   ++ T   VA+K ++      EA + E +V++ L+       
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTLQH-----D 237
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + V++      +  I I+ E +   SL DFL+ +     P+  + +   Q+ E +AF+  
Sbjct: 238 KLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDY---KVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
              IH DL+  NIL  +    KI D+   +V A+ P          K +A + I+FGS  
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPI---------KWTAPEAINFGS-- 345
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLA 331
                                    ++   D+WS G +L+E+ + G   +    N E + 
Sbjct: 346 -------------------------FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR 380
Query: 332 MMER 335
            +ER
Sbjct: 381 ALER 384

>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR--- 153
           +++ +KIG G FG++    +  T E VAIK+        E   +    L L  R+ +   
Sbjct: 11  FRVGKKIGCGNFGELRLGKNLYTNEYVAIKL--------EPMKSRAPQLHLEYRFYKQLG 62
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
           SG    Q+  +     +  +V E+LGPSL D     + R F +  V  I  QL+  + ++
Sbjct: 63  SGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYV 121
Query: 214 HDLRLIHTDLKPENILFVSP-----EYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
           H   LI+ D+KPEN L   P     + + I D+ + A+   D    K +P          
Sbjct: 122 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL-AKEYIDPETKKHIP---------- 170
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
                 ++EH  +  T  Y +    LG   S   D+ ++G + +    G   +Q
Sbjct: 171 ------YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y IL++IG G   +V   L+ E  +  AIK V   +   +   +  + +  L +  +   
Sbjct: 11  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
           + +++ ++     +I +V E     L  +L+K  +  P+     +   + +LE V  +H 
Sbjct: 70  KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 126
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             ++H+DLKP N L V    LK+ D+ +  +   D         +S +K    G      
Sbjct: 127 HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT--------TSVVKDSQVG------ 171
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
                   T +Y  PE I  +  S              D+WS+GCIL  +  G+  FQ  
Sbjct: 172 --------TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 221
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
           + +  ++ +  ++ P        IP+  L+ V K   K   + R+  PE
Sbjct: 222 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 270

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K L+++G+G FG V  C    L   TGE VA+K ++ S +++      EI++L+ L+  +
Sbjct: 16  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               + V    +   R ++ ++ E L   SL D+L+ +  R   + L+ +   Q+ + + 
Sbjct: 76  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL-QYTSQICKGME 131
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
           ++   R IH DL   NIL  +   +KI D+ +T   P D    K + P  S I       
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 184
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                           + APE +    +S   D+WS G +L EL
Sbjct: 185 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 213

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y IL++IG G   +V   L+ E  +  AIK V   +   +   +  + +  L +  +   
Sbjct: 58  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
           + +++ ++     +I +V E     L  +L+K  +  P+     +   + +LE V  +H 
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 173
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             ++H+DLKP N L V    LK+ D+ +  +   D         +S +K           
Sbjct: 174 HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT--------TSVVK----------- 213
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
              +  V T +Y  PE I  +  S              D+WS+GCIL  +  G+  FQ  
Sbjct: 214 ---DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 268
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
           + +  ++ +  ++ P        IP+  L+ V K   K   + R+  PE
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 70/257 (27%)
Query: 81  KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
           K GHY+  LG+ L          G GTFG+V     + TG  VA+K++   K      + 
Sbjct: 9   KIGHYV--LGDTL----------GVGTFGKVKIGEHQLTGHKVAVKILNRQK------IR 50
Query: 141 EIDVLELLKRYDRSGSRCVQIRNWFDYRN-HICIVFEML--------------GPSLYDF 185
            +DV+  +KR         +I+N   +R+ HI  +++++              G  L+D+
Sbjct: 51  SLDVVGKIKR---------EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101
Query: 186 LRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA 245
           + K+  R   ++  R + +Q+L  V + H   ++H DLKPEN+L  +    KI D+ +  
Sbjct: 102 ICKHG-RVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL-- 157
Query: 246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDM 304
                         S+ +   +F  T+           + +Y APEVI G  ++ P  D+
Sbjct: 158 --------------SNMMSDGEFLRTS---------CGSPNYAAPEVISGRLYAGPEVDI 194
Query: 305 WSVGCILIELCSGEALF 321
           WS G IL  L  G   F
Sbjct: 195 WSCGVILYALLCGTLPF 211

>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR--- 153
           +++ +KIG G FG++    +  T E VAIK+        E   +    L L  R+ +   
Sbjct: 32  FRVGKKIGCGNFGELRLGKNLYTNEYVAIKL--------EPMKSRAPQLHLEYRFYKQLG 83
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
           SG    Q+  +     +  +V E+LGPSL D     + R F +  V  I  QL+  + ++
Sbjct: 84  SGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYV 142
Query: 214 HDLRLIHTDLKPENILFVSP-----EYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
           H   LI+ D+KPEN L   P     + + I D+ + A+   D    K +P          
Sbjct: 143 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL-AKEYIDPETKKHIP---------- 191
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
                 ++EH  +  T  Y +    LG   S   D+ ++G + +    G   +Q
Sbjct: 192 ------YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 239

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y IL++IG G   +V   L+ E  +  AIK V   +   +   +  + +  L +  +   
Sbjct: 30  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
           + +++ ++     +I +V E     L  +L+K  +  P+     +   + +LE V  +H 
Sbjct: 89  KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 145
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             ++H+DLKP N L V    LK+ D+ +  +   D         +S +K           
Sbjct: 146 HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT--------TSVVK----------- 185
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
              +  V T +Y  PE I  +  S              D+WS+GCIL  +  G+  FQ  
Sbjct: 186 ---DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 240
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
           + +  ++ +  ++ P        IP+  L+ V K   K   + R+  PE
Sbjct: 241 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289

>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR--- 153
           +++ +KIG G FG++    +  T E VAIK+        E   +    L L  R+ +   
Sbjct: 11  FRVGKKIGCGNFGELRLGKNLYTNEYVAIKL--------EPMKSRAPQLHLEYRFYKQLG 62
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
           SG    Q+  +     +  +V E+LGPSL D     + R F +  V  I  QL+  + ++
Sbjct: 63  SGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYV 121
Query: 214 HDLRLIHTDLKPENILFVSP-----EYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
           H   LI+ D+KPEN L   P     + + I D+ + A+   D    K +P          
Sbjct: 122 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGL-AKEYIDPETKKHIP---------- 170
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
                 ++EH  +  T  Y +    LG   S   D+ ++G + +    G   +Q
Sbjct: 171 ------YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y IL++IG G   +V   L+ E  +  AIK V   +   +   +  + +  L +  +   
Sbjct: 58  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
           + +++ ++     +I +V E     L  +L+K  +  P+     +   + +LE V  +H 
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 173
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             ++H+DLKP N L V    LK+ D+ +  +   D         +S +K    G+     
Sbjct: 174 HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT--------TSVVKDSQVGAV---- 220
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
                     +Y  PE I  +  S              D+WS+GCIL  +  G+  FQ  
Sbjct: 221 ----------NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 268
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
           + +  ++ +  ++ P        IP+  L+ V K   K   + R+  PE
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 97/238 (40%), Gaps = 41/238 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRS 154
           ++ ++ +G G FG V +  ++      AIK +R   +   RE  M E+  L  L+     
Sbjct: 7   FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH---- 62
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPS-----LY---DFLRKNNYRPF----------PV 196
               V+  N +  +N      E L PS     LY      RK N + +            
Sbjct: 63  -PGIVRYFNAWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
            +   I  Q+ E V F+H   L+H DLKP NI F   + +K+ D+ +      D      
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
           L    A            +  H   V T+ Y +PE I G  +S+  D++S+G IL EL
Sbjct: 178 LTPMPA------------YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 90  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 144
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 183 SPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 68/256 (26%)
Query: 81  KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
           K GHY+  LG+ L          G GTFG+V     + TG  VA+K++   K      + 
Sbjct: 9   KIGHYV--LGDTL----------GVGTFGKVKIGEHQLTGHKVAVKILNRQK------IR 50
Query: 141 EIDVLELLKRYDRSGSRCVQIRNWFDYRN-HICIVFEML--------------GPSLYDF 185
            +DV+  +KR         +I+N   +R+ HI  +++++              G  L+D+
Sbjct: 51  SLDVVGKIKR---------EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101
Query: 186 LRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA 245
           + K+  R   ++  R + +Q+L  V + H   ++H DLKPEN+L  +    KI D+ ++ 
Sbjct: 102 ICKHG-RVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSN 159
Query: 246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMW 305
              +D  + +             GS  Y   E   ++S R Y  PEV          D+W
Sbjct: 160 MM-SDGEFLRD----------SCGSPNYAAPE---VISGRLYAGPEV----------DIW 195
Query: 306 SVGCILIELCSGEALF 321
           S G IL  L  G   F
Sbjct: 196 SCGVILYALLCGTLPF 211

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 50/247 (20%)
Query: 81  KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
           K GHY+  LG+ L          G GTFG+V       TG  VA+K++   +K R   + 
Sbjct: 14  KIGHYI--LGDTL----------GVGTFGKVKVGKHELTGHKVAVKILNR-QKIRSLDVV 60
Query: 141 -----EIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPF 194
                EI  L+L +         +++       + I +V E + G  L+D++ KN     
Sbjct: 61  GKIRREIQNLKLFRH-----PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--L 113
Query: 195 PVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 254
                R + +Q+L  V + H   ++H DLKPEN+L  +    KI D+ ++    +D  + 
Sbjct: 114 DEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFL 172
Query: 255 KRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
           +             GS  Y   E   ++S R Y  PEV          D+WS G IL  L
Sbjct: 173 RX----------SCGSPNYAAPE---VISGRLYAGPEV----------DIWSSGVILYAL 209
Query: 315 CSGEALF 321
             G   F
Sbjct: 210 LCGTLPF 216

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 39/229 (17%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
           + +++ +GEG  G+V   ++R T E VA+K+V  +      E    EI + ++L   +  
Sbjct: 8   WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +  ++ +R    I +  L    G  L+D +  +   P P    +    QL+  V
Sbjct: 66  ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H + + H D+KPEN+L    + LKI D+ +     T   Y  R              
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
                +  N +  T  Y APE++    + + P D+WS G +L  + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 37/235 (15%)
Query: 87  FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDV 144
            ALGE     ++ + ++G G  G V     + +G  +A K++   IK   R   + E+ V
Sbjct: 1   MALGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 145 LELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIG 203
           L     ++ +    V     F     I I  E M G SL   L+K      P  ++ ++ 
Sbjct: 61  L-----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVS 113
Query: 204 RQLLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
             +++ + ++ +  +++H D+KP NIL  S   +K+ D+ V+                  
Sbjct: 114 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----------------- 156
Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
            ++ID        +  N  V TR Y +PE + G  +S   D+WS+G  L+E+  G
Sbjct: 157 -QLID--------EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 37/233 (15%)
Query: 89  LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLE 146
           +GE     ++ + ++G G  G V     R +G  +A K++   IK   R   + E+ VL 
Sbjct: 10  VGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL- 68
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
               ++ +    V     F     I I  E M G SL   L++   +  P +++ ++   
Sbjct: 69  ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIA 122
Query: 206 LLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           +L  +A++ +  +++H D+KP NIL  S   +K+ D+ V+                   +
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------Q 164
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           +ID  S A      N  V TR Y APE + G  +S   D+WS+G  L+EL  G
Sbjct: 165 LID--SMA------NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 12  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 65  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH +L+  NIL       KI D+ + AR   D  Y  R      IK            
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 171
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 172 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 221
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 222 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 90  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 144
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 183 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAM--TEIDVLELLKRYD 152
           Y++++ IG G FG+V     + T +  A+K++   +  K  ++A    E D++       
Sbjct: 76  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA---- 131
Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
            +    VQ+   F    ++ +V E M G  L + +  +NY   P    R    +++  + 
Sbjct: 132 -NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALD 187
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
            +H +  IH D+KP+N+L                           L KS  +K+ DFG+ 
Sbjct: 188 AIHSMGFIHRDVKPDNML---------------------------LDKSGHLKLADFGTC 220
Query: 272 AYEHQEH----NYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGEALF 321
              ++E     +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 221 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 88  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 142
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 180
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 181 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y IL++IG G   +V   L+ E  +  AIK V   +   +   +  + +  L +  +   
Sbjct: 10  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
           + +++ ++     +I +V E     L  +L+K  +  P+     +   + +LE V  +H 
Sbjct: 69  KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 125
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             ++H+DLKP N L V    LK+ D+ +  +   D         +S +K           
Sbjct: 126 HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT--------TSVVK----------- 165
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
              +  V T +Y  PE I  +  S              D+WS+GCIL  +  G+  FQ  
Sbjct: 166 ---DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 220
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
           + +  ++ +  ++ P        IP+  L+ V K   K   + R+  PE
Sbjct: 221 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 269

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 37  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 92
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 93  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 147
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 148 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 185
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 186 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 90  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 144
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 183 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 106/256 (41%), Gaps = 60/256 (23%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y++L+ IG+G F +V       TG+ VA+K++           T+++   L K +     
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDK---------TQLNSSSLQKLF----- 61
Query: 157 RCVQIRNWFDYRNHICIVFEML--------------GPSLYDFLRKNNYRPFPVDLVREI 202
           R V+I    ++ N I  +FE++              G  ++D+L  +          R  
Sbjct: 62  REVRIXKVLNHPN-IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK--EKEARAK 118
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            RQ++  V + H   ++H DLK EN+L  +   +KI D+  +                  
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNE---------------- 162
Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALF 321
                FG+        +       Y APE+  G  +  P  D+WS+G IL  L SG   F
Sbjct: 163 ---FTFGNKL------DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Query: 322 QTHENLEHLAMMERVL 337
              +NL+ L   ERVL
Sbjct: 214 DG-QNLKEL--RERVL 226

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y IL++IG G   +V   L+ E  +  AIK V   +   +   +  + +  L +  +   
Sbjct: 14  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
           + +++ ++     +I +V E     L  +L+K  +  P+     +   + +LE V  +H 
Sbjct: 73  KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 129
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             ++H+DLKP N L V    LK+ D+ +  +   D         +S +K           
Sbjct: 130 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT--------TSVVK----------- 169
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
              +  V T +Y  PE I  +  S              D+WS+GCIL  +  G+  FQ  
Sbjct: 170 ---DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 224
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
           + +  ++ +  ++ P        IP+  L+ V K   K   + R+  PE
Sbjct: 225 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 273

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 90  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 144
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 183 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 90  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 144
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 183 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 88  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 142
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 180
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 181 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 49/256 (19%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYD 152
           +++ + +G+G+FG+V     ++T +  AIK ++     +    E  M E  VL L   + 
Sbjct: 20  FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH- 78
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREI--GRQLLE 208
                   +   F  + ++  V E L  G  +Y     + +     DL R      +++ 
Sbjct: 79  ---PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-----DLSRATFYAAEIIL 130
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + F+H   +++ DLK +NIL                           L K   IK+ DF
Sbjct: 131 GLQFLHSKGIVYRDLKLDNIL---------------------------LDKDGHIKIADF 163
Query: 269 G---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QT 323
           G          + N    T  Y APE++LG  +++  D WS G +L E+  G++ F  Q 
Sbjct: 164 GMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
Query: 324 HENLEHLAMMERVLGP 339
            E L H   M+    P
Sbjct: 224 EEELFHSIRMDNPFYP 239

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAM--TEIDVLELLKRYD 152
           Y++++ IG G FG+V     + T +  A+K++   +  K  ++A    E D++       
Sbjct: 71  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA---- 126
Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
            +    VQ+   F    ++ +V E M G  L + +  +NY   P    R    +++  + 
Sbjct: 127 -NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALD 182
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
            +H +  IH D+KP+N+L                           L KS  +K+ DFG+ 
Sbjct: 183 AIHSMGFIHRDVKPDNML---------------------------LDKSGHLKLADFGTC 215
Query: 272 AYEHQEH----NYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGEALF 321
              ++E     +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 86
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 87  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 141
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+  TA+  +        P+S   +     
Sbjct: 142 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLS--------PESKQARA---- 188
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 189 ---------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 90
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 91  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 145
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 146 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 183
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 184 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 88  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 142
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 180
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 181 SPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           + +LR IG G++ +VL    ++T    A+KVV   KK       +ID ++  K      S
Sbjct: 11  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVV---KKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 157 R---CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                V + + F   + +  V E +  G  ++   R+   R  P +  R    ++   + 
Sbjct: 68  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALN 124
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS--PTDVNYYKRLPKSSAIKVIDFG 269
           ++H+  +I+ DLK +N+L  S  ++K+ DY +      P D                   
Sbjct: 125 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT----------------- 167
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
                    +    T +Y APE++ G  + +  D W++G ++ E+ +G + F
Sbjct: 168 ---------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 90
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 91  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 145
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 146 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 183
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 184 SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           + +LR IG G++ +VL    ++T    A+KVV   KK       +ID ++  K      S
Sbjct: 7   FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVV---KKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 157 R---CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                V + + F   + +  V E +  G  ++   R+   R  P +  R    ++   + 
Sbjct: 64  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALN 120
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS--PTDVNYYKRLPKSSAIKVIDFG 269
           ++H+  +I+ DLK +N+L  S  ++K+ DY +      P D                   
Sbjct: 121 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT----------------- 163
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
                    +    T +Y APE++ G  + +  D W++G ++ E+ +G + F
Sbjct: 164 ---------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           + +LR IG G++ +VL    ++T    A+KVV   KK       +ID ++  K      S
Sbjct: 22  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVV---KKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 157 R---CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                V + + F   + +  V E +  G  ++   R+   R  P +  R    ++   + 
Sbjct: 79  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALN 135
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS--PTDVNYYKRLPKSSAIKVIDFG 269
           ++H+  +I+ DLK +N+L  S  ++K+ DY +      P D                   
Sbjct: 136 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT----------------- 178
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
                    +    T +Y APE++ G  + +  D W++G ++ E+ +G + F
Sbjct: 179 ---------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAM--TEIDVLELLKRYD 152
           Y++++ IG G FG+V     + T +  A+K++   +  K  ++A    E D++       
Sbjct: 76  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 130
Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
            +    VQ+   F    ++ +V E M G  L + +  +NY   P    R    +++  + 
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALD 187
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
            +H +  IH D+KP+N+L                           L KS  +K+ DFG+ 
Sbjct: 188 AIHSMGFIHRDVKPDNML---------------------------LDKSGHLKLADFGTC 220
Query: 272 AYEHQEH----NYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGEALF 321
              ++E     +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 221 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 49/252 (19%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGS 156
           + +G+G+FG+V     ++T +  AIK ++     +    E  M E  VL L   +     
Sbjct: 23  KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH----P 78
Query: 157 RCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVAF 212
               +   F  + ++  V E L  G  +Y     + +     DL R      +++  + F
Sbjct: 79  FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-----DLSRATFYAAEIILGLQF 133
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG--- 269
           +H   +++ DLK +NIL                           L K   IK+ DFG   
Sbjct: 134 LHSKGIVYRDLKLDNIL---------------------------LDKDGHIKIADFGMCK 166
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENL 327
                  + N    T  Y APE++LG  +++  D WS G +L E+  G++ F  Q  E L
Sbjct: 167 ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 226
Query: 328 EHLAMMERVLGP 339
            H   M+    P
Sbjct: 227 FHSIRMDNPFYP 238

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 65
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 66  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 121 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 158
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 159 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 9   FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 64
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 65  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 119
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 120 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 157
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 158 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 43/253 (16%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVR-----SIKKYREAAMTEIDVLELLKRYDRSGSR 157
           IG G FG+V        G+ VA+K  R      I +  E    E  +  +LK  +    R
Sbjct: 15  IGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 158 CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
            V ++       ++C+V E    GP      R  + +  P D++     Q+   + ++HD
Sbjct: 73  GVCLK-----EPNLCLVMEFARGGP----LNRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 216 ---LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
              + +IH DLK  NIL +     K+ +  ++ +                +K+ DFG   
Sbjct: 124 EAIVPIIHRDLKSSNILILQ----KVENGDLSNK---------------ILKITDFGLAR 164
Query: 273 YEHQEHNYIVSTRH-YRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL--EH 329
             H+      +  + + APEVI    +S   D+WS G +L EL +GE  F+  + L   +
Sbjct: 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY 224
Query: 330 LAMMERVLGPIPQ 342
              M ++  PIP 
Sbjct: 225 GVAMNKLALPIPS 237

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 86
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 87  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 141
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+  TA+  +        P+S   +     
Sbjct: 142 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLS--------PESKQARA---- 188
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 189 ---------NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 16  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 71
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 72  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 126
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+  TA+  +        P+S   +     
Sbjct: 127 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLS--------PESKQARA---- 173
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 174 ---------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 12  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 67
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 68  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 122
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 123 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 160
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 161 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/294 (22%), Positives = 117/294 (39%), Gaps = 59/294 (20%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           Y IL++IG G   +V   L+ E  +  AIK V   +   +   +  + +  L +  +   
Sbjct: 30  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
           + +++ ++     +I +V E     L  +L+K  +  P+     +   + +LE V  +H 
Sbjct: 89  KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 145
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             ++H+DLKP N L V                               +K+IDFG      
Sbjct: 146 HGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIANQMQ 177
Query: 276 QEHNYI-----VSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEA 319
            +   +     V T +Y  PE I  +  S              D+WS+GCIL  +  G+ 
Sbjct: 178 PDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
Query: 320 LFQTHENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
            FQ  + +  ++ +  ++ P        IP+  L+ V K   K   + R+  PE
Sbjct: 238 PFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 11  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 66
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 67  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 121
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 122 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 159
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 160 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 35/230 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           + +LR IG G++ +VL    ++T    A++VV   KK       +ID ++  K      S
Sbjct: 54  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVV---KKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 157 R---CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                V + + F   + +  V E +  G  ++   R+   R  P +  R    ++   + 
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALN 167
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H+  +I+ DLK +N+L  S  ++K+ DY +                   ++  D  ST
Sbjct: 168 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE---------------GLRPGDTTST 212
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
                       T +Y APE++ G  + +  D W++G ++ E+ +G + F
Sbjct: 213 ---------FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 27/226 (11%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRS 154
           +++  ++G G FG VL  + ++TGE VAIK  R     K RE    EI +++ L   +  
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 155 GSRCVQ--IRNWFDYRNHICIVFEMLGPSLYDFLRK-NNYRPFPVDLVREIGRQLLECVA 211
            +R V   ++        +  +    G  L  +L +  N        +R +   +   + 
Sbjct: 76  SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H+ R+IH DLKPENI+         P  +       D+ Y K L         D G  
Sbjct: 136 YLHENRIIHRDLKPENIVLQ-------PGPQRLIHKIIDLGYAKEL---------DQGEL 179
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
             E       V T  Y APE++    ++   D WS G +  E  +G
Sbjct: 180 CTE------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 27/226 (11%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRS 154
           +++  ++G G FG VL  + ++TGE VAIK  R     K RE    EI +++ L   +  
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 155 GSRCVQ--IRNWFDYRNHICIVFEMLGPSLYDFLRK-NNYRPFPVDLVREIGRQLLECVA 211
            +R V   ++        +  +    G  L  +L +  N        +R +   +   + 
Sbjct: 77  SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H+ R+IH DLKPENI+         P  +       D+ Y K L         D G  
Sbjct: 137 YLHENRIIHRDLKPENIVLQ-------PGPQRLIHKIIDLGYAKEL---------DQGEL 180
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
             E       V T  Y APE++    ++   D WS G +  E  +G
Sbjct: 181 CTE------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+ E V F+H   L+H DLKP NI F   + +K+ D+ +      D      L    A  
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA-- 229
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                     +  H   V T+ Y +PE I G  +S+  D++S+G IL EL
Sbjct: 230 ----------YATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 64
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 65  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 121
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 162
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                    + +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 163 -------RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 216 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 235
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 236 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 36  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 89
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 90  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 146
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 187
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 188 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 240
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 241 YKRISRVEFTFPD------------FVT-------EGAR--------------------- 260
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 261 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 289

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 38/250 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           + I R +G+G FG V    +R++   +A+KV+   K   E A  E  +   ++   +S  
Sbjct: 14  FDIGRPLGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVE--IQSHL 69
Query: 157 RCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
           R   I   + Y     R ++ + +  LG ++Y  L+K +   F          +L   ++
Sbjct: 70  RHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLSR--FDEQRTATYITELANALS 126
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           + H  R+IH D+KPEN+L  S   LKI D+  +  +P+                      
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS--------------------- 165
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
                  + +  T  Y  PE+I G       D+WS+G +  E   G   F+ H   E   
Sbjct: 166 -----RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
Query: 332 MMERVLGPIP 341
            + RV    P
Sbjct: 221 RISRVEFTFP 230

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 68
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 125
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 166
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 167 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 220 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 239
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 240 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 36  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 89
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 90  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 146
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 187
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                    + +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 188 -------RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 240
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 241 YKRISRVEFTFPD------------FVT-------EGAR--------------------- 260
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 261 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 289

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 64
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 65  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 121
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS------------------- 162
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 163 -------RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 216 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 235
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 236 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 27  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 80
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 81  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 137
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 178
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 179 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 231
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 232 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 251
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 252 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 280

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 125/338 (36%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 68
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 125
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 166
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 167 -------RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P  +                    EGA                      
Sbjct: 220 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 239
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 240 ---------DLISRLLKHNPSQRPXLREVLEHPWITAN 268

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 66
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 67  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 123
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 164
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 165 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 218 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 237
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 238 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 24  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 76
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 77  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D     R      IK            
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 183
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 184 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 233
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 234 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 46/276 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT----EIDVLELLKRYD 152
           ++IL+ IG G FG+V     +   +  A+K++   +  + A       E DVL      +
Sbjct: 76  FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL-----VN 130
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   +   F   N++ +V +  +G  L   L K   R  P ++ R    +++  + 
Sbjct: 131 GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAID 189
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
            +H L  +H D+KP+NIL     ++++ D+                   S +K+++ G+ 
Sbjct: 190 SVHQLHYVHRDIKPDNILMDMNGHIRLADF------------------GSCLKLMEDGTV 231
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLG-----WSYPCDMWSVGCILIELCSGEALFQTHEN 326
                + +  V T  Y +PE++  +      +   CD WS+G  + E+  GE  F     
Sbjct: 232 -----QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 286
Query: 327 LEHLAMM----ERVLGPIPQHMLKRVDKPAEKFVRR 358
           +E    +    ER   P     +  V + A+  +RR
Sbjct: 287 VETYGKIMNHKERFQFPT---QVTDVSENAKDLIRR 319

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 14  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 67
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K +   F          +L   
Sbjct: 68  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 124
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 165
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 166 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 218
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 219 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 238
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 239 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 267

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 51/236 (21%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K L +IG G +G V   + + +G+ +A+K +RS    +E     +D L+++ R     S 
Sbjct: 25  KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMD-LDVVMR----SSD 79
Query: 158 CVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI-GRQLLECVAFMH 214
           C  I  ++   +R   C +   L  + +D   K  Y      +  EI G+  L  V  ++
Sbjct: 80  CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 215 ----DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
               +L++IH D+KP NIL                           L +S  IK+ DFG 
Sbjct: 140 HLKENLKIIHRDIKPSNIL---------------------------LDRSGNIKLCDFGI 172
Query: 271 TAYEHQEHNYIVSTRH-----YRAPEVI----LGLGWSYPCDMWSVGCILIELCSG 317
           +    Q  + I  TR      Y APE I       G+    D+WS+G  L EL +G
Sbjct: 173 SG---QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 162 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P  +                    EGA                      
Sbjct: 215 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++     IK+ +   +T E DV+    R D
Sbjct: 39  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM---SRLD 95
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 96  HP----FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 149
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 150 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 187
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 188 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 38/250 (15%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           + I R +G+G FG V    +R++   +A+KV+   K   E A  E  +   ++   +S  
Sbjct: 14  FDIGRPLGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVE--IQSHL 69
Query: 157 RCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
           R   I   + Y     R ++ + +  LG ++Y  L+K +   F          +L   ++
Sbjct: 70  RHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLSR--FDEQRTATYITELANALS 126
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           + H  R+IH D+KPEN+L  S   LKI D+  +  +P+                      
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS--------------------- 165
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
                    +  T  Y  PE+I G       D+WS+G +  E   G   F+ H   E   
Sbjct: 166 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
Query: 332 MMERVLGPIP 341
            + RV    P
Sbjct: 221 RISRVEFTFP 230

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 51/275 (18%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKV-----VRSIKKYREAAMTEIDVL 145
           E   + Y++   +G+G FG V           VAIKV     V       ++    ++V 
Sbjct: 27  EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 146 ELLKRYDRSG-SRCVQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREI 202
            L K     G    +++ +WF+ +    +V E   P+  L+D++ +    P      R  
Sbjct: 87  LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCF 144
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
             Q++  +   H   ++H D+K ENIL                    D+       +   
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILI-------------------DL-------RRGC 178
Query: 263 IKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEAL 320
            K+IDFGS A  H E +     TR Y  PE I    + + P  +WS+G +L ++  G+  
Sbjct: 179 AKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP 238
Query: 321 FQ-------------THENLEHLAMMERVLGPIPQ 342
           F+              H + +  A++ R L P P 
Sbjct: 239 FERDQEILEAELHFPAHVSPDCCALIRRCLAPKPS 273

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 25  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 77
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 78  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D     R      IK            
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 184
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 185 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 234
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 235 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 22  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 74
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 75  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D     R      IK            
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 181
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 182 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 232 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 162 -------RRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P  +                    EGA                      
Sbjct: 215 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K +   F          +L   
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 162 -------RRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P  +                    EGA                      
Sbjct: 215 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 18  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 70
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 71  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D     R      IK            
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 177
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 178 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 227
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 228 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 12  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 65
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 66  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 122
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 163
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 164 -------RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 217 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 236
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 237 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 265

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 16  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 68
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 69  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D     R      IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 175
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 16  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 68
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 69  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D     R      IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 175
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/333 (21%), Positives = 119/333 (35%), Gaps = 89/333 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA----MTEIDVLELLKRYD 152
           + I+R +G+G FG V    +++    +A+KV+   +  +E        EI++   L+   
Sbjct: 16  FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-- 73
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +++ N+F  R  I ++ E   P   LY  L+K+    F          +L + +
Sbjct: 74  ---PNILRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHGR--FDEQRSATFMEELADAL 127
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            + H+ ++IH D+KPEN+L      LKI D+  +  +P+                     
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS--------------------- 166
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
                     +  T  Y  PE+I G       D+W  G +  E   G   F +       
Sbjct: 167 -----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS------- 214
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
                     P H                        T R  +   LK P   +      
Sbjct: 215 ----------PSHT----------------------ETHRRIVNVDLKFPPFLS------ 236
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
           D S     DL+  LLRY P  RL     ++HP+
Sbjct: 237 DGSK----DLISKLLRYHPPQRLPLKGVMEHPW 265

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 66
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K +   F          +L   
Sbjct: 67  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 164
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 165 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 218 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 237
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 238 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 38/228 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
           +K  + +GEG+F   +   +  T    AIK++     IK+ +   +T E DV+  L    
Sbjct: 32  FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++ +F +++   + F +       L  ++RK     F     R    +++  
Sbjct: 88  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 142
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   +IH DLKPENIL     +++I D+                      KV+   
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 180
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           S   +    N  V T  Y +PE++         D+W++GCI+ +L +G
Sbjct: 181 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G FG+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 17  KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 69
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 70  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D     R      IK            
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 176
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 177 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 226
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 227 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 9   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 62
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K +   F          +L   
Sbjct: 63  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 119
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 120 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 160
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 161 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 213
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P  +                    EGA                      
Sbjct: 214 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 233
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 234 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 262

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 66
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 67  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 123
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 164
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 165 -------RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 218 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 237
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 238 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K +   F          +L   
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 162 -------RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P  +                    EGA                      
Sbjct: 215 YKRISRVEFTFPDFV-------------------TEGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 68
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 125
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 166
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 167 -------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 220 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 239
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 240 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 95/238 (39%), Gaps = 56/238 (23%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREA-AMTEIDVLELL----- 148
           +K +  IG G FGQV     R  G+T  IK V+  + K  RE  A+ ++D + ++     
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 149 ------------KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
                       K   RS ++C+ I+  F  +            +L  ++ K        
Sbjct: 73  WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKG-----------TLEQWIEKRRGEKLDK 121
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
            L  E+  Q+ + V ++H  +LI+ DLKP NI  V  + +KI D+ +      D    KR
Sbjct: 122 VLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKR 178
Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                 ++                      Y +PE I    +    D++++G IL EL
Sbjct: 179 XRSKGTLR----------------------YMSPEQISSQDYGKEVDLYALGLILAEL 214

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 128/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 66
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K +   F          +L   
Sbjct: 67  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 164
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                    + +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 165 -------RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P  +                    EGA                      
Sbjct: 218 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 237
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 238 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 66
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K +   F          +L   
Sbjct: 67  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 164
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 165 -------RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 218 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 237
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 238 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/336 (20%), Positives = 120/336 (35%), Gaps = 87/336 (25%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R     S
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 68
Query: 157 -----RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                  +++  +F     + ++ E   P    +        F          +L   ++
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEY-APRGEVYKELQKLSKFDEQRTATYITELANALS 127
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           + H  R+IH D+KPEN+L  S   LKI D+  +  +P+                      
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------------------- 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
                    +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E   
Sbjct: 167 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
            + RV    P             FV        EGA                        
Sbjct: 222 RISRVEFTFPD------------FV-------TEGAR----------------------- 239
Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                  DL+  LL+++PS R    + L+HP+ T +
Sbjct: 240 -------DLISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 64
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 65  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 121
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 162
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 163 -------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 216 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 235
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 236 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K + ++G+G FG V  C    L   TG  VA+K ++ S    +     EI +L+ L    
Sbjct: 13  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREI--GRQLLE 208
               R V   ++   R  + +V E L PS  L DFL+++  R   +D  R +    Q+ +
Sbjct: 73  IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 125
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY-KRLPKSSAIKVID 267
            + ++   R +H DL   NIL  S  ++KI D+ +    P D +YY  R P  S I    
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---- 181
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL-------CSGEAL 320
                              + APE +    +S   D+WS G +L EL       CS  A 
Sbjct: 182 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 223
Query: 321 F 321
           F
Sbjct: 224 F 224

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K +   F          +L   
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 162 -------RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P  +                    EGA                      
Sbjct: 215 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 162 -------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 215 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K + ++G+G FG V  C    L   TG  VA+K ++ S    +     EI +L+ L    
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREI--GRQLLE 208
               R V   ++   R  + +V E L PS  L DFL+++  R   +D  R +    Q+ +
Sbjct: 86  IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 138
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY-KRLPKSSAIKVID 267
            + ++   R +H DL   NIL  S  ++KI D+ +    P D +YY  R P  S I    
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---- 194
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL-------CSGEAL 320
                              + APE +    +S   D+WS G +L EL       CS  A 
Sbjct: 195 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 236
Query: 321 F 321
           F
Sbjct: 237 F 237

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/336 (20%), Positives = 120/336 (35%), Gaps = 87/336 (25%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R     S
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 68
Query: 157 -----RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                  +++  +F     + ++ E   P    +        F          +L   ++
Sbjct: 69  HLRHPNILRLYGYFHDATRVYLILEY-APRGEVYKELQKLSKFDEQRTATYITELANALS 127
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           + H  R+IH D+KPEN+L  S   LKI D+  +  +P+                      
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------------------- 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
                    +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E   
Sbjct: 167 -----RRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
            + RV    P             FV        EGA                        
Sbjct: 222 RISRVEFTFPD------------FV-------TEGAR----------------------- 239
Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                  DL+  LL+++PS R    + L+HP+ T +
Sbjct: 240 -------DLISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 34/241 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++++++G G FG+V   +    G T VAIK ++      E+ + E  +++ LK       
Sbjct: 12  QLIKRLGNGQFGEVW--MGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKH-----D 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + VQ+         I IV E +   SL DFL+    R   +  + ++  Q+   +A++  
Sbjct: 65  KLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
           +  IH DL+  NIL  +    KI D+ + AR   D     R      IK           
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGL-ARLIEDNEXTARQGAKFPIK----------- 171
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMME 334
                      + APE  L   ++   D+WS G +L EL + G   +    N E L  +E
Sbjct: 172 -----------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE 220
Query: 335 R 335
           R
Sbjct: 221 R 221

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 98  KILRKIGEGTFGQV-LDCLDRE---TGETVAIKVVRSI--KKYREAAMTEIDVLELL-KR 150
           K +R +GEG FG+V L C D     TGE VA+K +++    ++R     EID+L  L   
Sbjct: 17  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           +      C + +   +    + + +  LG SL D+L +++     + L     +Q+ E +
Sbjct: 77  HIIKYKGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHSIGLAQLLL---FAQQICEGM 130
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
           A++H    IH +L   N+L  +   +KI D+ +    P    YY         +V + G 
Sbjct: 131 AYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY---------RVREDGD 181
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                       S   + APE +    + Y  D+WS G  L EL
Sbjct: 182 ------------SPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/390 (21%), Positives = 143/390 (36%), Gaps = 133/390 (34%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK------KYREAAMTEIDVLE 146
           L  +Y +   IG+G++G V   ++ +T    AIK++   K      K  E   TE+ +++
Sbjct: 24  LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLR---------------KNN 190
            L           ++   ++   +IC+V E+  G  L D L                K  
Sbjct: 84  KLHH-----PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQ 138
Query: 191 YRPFPV-----------------------DLVREIGRQLLECVAFMHDLRLIHTDLKPEN 227
             P P                         L+  I RQ+   + ++H+  + H D+KPEN
Sbjct: 139 ICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPEN 198
Query: 228 ILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN---YIVST 284
            LF +                          KS  IK++DFG +   ++ +N   Y ++T
Sbjct: 199 FLFST-------------------------NKSFEIKLVDFGLSKEFYKLNNGEYYGMTT 233
Query: 285 R----HYRAPEVILGLGWSY--PCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
           +    ++ APEV+     SY   CD WS G +L                 HL +M  V  
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL-----------------HLLLMGAV-- 274
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
           P P                        G    ++I  VL     + L  ++ +++    +
Sbjct: 275 PFP------------------------GVNDADTISQVLN----KKLCFENPNYNVLSPL 306
Query: 399 --DLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             DLL  LL  +   R  A  AL+HP+ ++
Sbjct: 307 ARDLLSNLLNRNVDERFDAMRALQHPWISQ 336

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 64  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 162 -------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 215 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 274 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 326
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           +   M   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 327 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 386
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL+  NIL       K+ D+ + AR   D  Y  R      IK                
Sbjct: 387 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 429
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 430 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K + ++G+G FG V  C    L   TG  VA+K ++ S    +     EI +L+ L    
Sbjct: 14  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREI--GRQLLE 208
               R V   ++   R  + +V E L PS  L DFL+++  R   +D  R +    Q+ +
Sbjct: 74  IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY-KRLPKSSAIKVID 267
            + ++   R +H DL   NIL  S  ++KI D+ +    P D +YY  R P  S I    
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---- 182
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL-------CSGEAL 320
                              + APE +    +S   D+WS G +L EL       CS  A 
Sbjct: 183 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 224
Query: 321 F 321
           F
Sbjct: 225 F 225

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 89  LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLE 146
           +GE     ++ + ++G G  G V     + +G  +A K++   IK   R   + E+ VL 
Sbjct: 62  VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 120
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
               ++ +    V     F     I I  E M G SL   L+K      P  ++ ++   
Sbjct: 121 ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIA 174
Query: 206 LLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           +++ + ++ +  +++H D+KP NIL  S   +K+ D+ V+ +                  
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------ 216
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           +ID  S A      N  V TR Y +PE + G  +S   D+WS+G  L+E+  G
Sbjct: 217 LID--SMA------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 39/239 (16%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK---- 149
            S ++ +  +G+G FGQV+   +       AIK +R  ++     ++E+ +L  L     
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 150 -RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS-------------LYDFLRKNNYRPFP 195
            RY  +         W + RN +     +   S             LYD +   N     
Sbjct: 65  VRYYAA---------WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQ-Q 114
Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
            D    + RQ+LE ++++H   +IH +LKP NI       +KI D+ +           K
Sbjct: 115 RDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA----------K 164
Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIE 313
            + +S  I  +D  +           + T  Y A EV+ G G ++   D +S+G I  E
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 39/241 (16%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKR 150
           + +  L  +G+G+FG+V+    + T E  AIK+++     +    E  M E  VL LL +
Sbjct: 19  TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYR-PFPVDLVREIGRQLL 207
                    Q+ + F   + +  V E +  G  +Y   +   ++ P  V    EI   L 
Sbjct: 79  ----PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF 134
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
               F+H   +I+ DLK +N++  S  ++KI D+ +      D                 
Sbjct: 135 ----FLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD----------------- 173
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
            G T  E         T  Y APE+I    +    D W+ G +L E+ +G+  F   +  
Sbjct: 174 -GVTTRE------FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 226
Query: 328 E 328
           E
Sbjct: 227 E 227

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 89  LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLE 146
           +GE     ++ + ++G G  G V     + +G  +A K++   IK   R   + E+ VL 
Sbjct: 27  VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 85
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
               ++ +    V     F     I I  E M G SL   L+K      P  ++ ++   
Sbjct: 86  ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIA 139
Query: 206 LLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           +++ + ++ +  +++H D+KP NIL  S   +K+ D+ V+ +                  
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------ 181
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           +ID  S A      N  V TR Y +PE + G  +S   D+WS+G  L+E+  G
Sbjct: 182 LID--SMA------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 12  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 65
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 66  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 122
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI ++  +  +P+                    
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS------------------- 163
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 164 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 217 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 236
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 237 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 265

>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 44/244 (18%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
           ++   +++ +KIG G FG++    +  T E VAIK+        E   +    L L  R+
Sbjct: 1   SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL--------EPIKSRAPQLHLEYRF 52
Query: 152 DR--SGSRCV-QIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
            +  S +  V Q+  +     +  +V E+LGPSL D     + R F +  V  I  QL+ 
Sbjct: 53  YKQLSATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLIT 111
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H   LI+ D+KPEN L   P                         +  AI +IDF
Sbjct: 112 RMEYVHTKSLIYRDVKPENFLVGRPG----------------------TKRQHAIHIIDF 149
Query: 269 GSTA----------YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
           G               ++EH  +  T  Y +    LG   S   D+ ++G + +    G 
Sbjct: 150 GLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGS 209
Query: 319 ALFQ 322
             +Q
Sbjct: 210 LPWQ 213

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 98  KILRKIGEGTFGQV-LDCLDRE---TGETVAIKVVRSI--KKYREAAMTEIDVLELL-KR 150
           K +R +GEG FG+V L C D     TGE VA+K +++    ++R     EID+L  L   
Sbjct: 17  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           +      C + +   +    + + +  LG SL D+L +++     +  +    +Q+ E +
Sbjct: 77  HIIKYKGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHS---IGLAQLLLFAQQICEGM 130
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
           A++H    IH +L   N+L  +   +KI D+ +    P    YY         +V + G 
Sbjct: 131 AYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY---------RVREDGD 181
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                       S   + APE +    + Y  D+WS G  L EL
Sbjct: 182 ------------SPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 47/241 (19%)
Query: 101 RKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIKKY--REAAMTEIDVLELLKRYDR 153
           + +G G FG+V++      G+      VA+K+++S      +EA M+E+ ++  L +++ 
Sbjct: 37  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 154 ---------SGSRCVQIRNWFDYRNHICIV----FEMLGPSLY-----DFLRKNNYRPFP 195
                     G   + I  +  Y + +  +      MLGPSL      + L K + RP  
Sbjct: 97  IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
           +  +     Q+ + +AF+     IH D+   N+L  +    KI D+ +      D NY  
Sbjct: 157 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 216
Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
           +      +K                      + APE I    ++   D+WS G +L E+ 
Sbjct: 217 KGNARLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIF 254
Query: 316 S 316
           S
Sbjct: 255 S 255

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 97/246 (39%), Gaps = 45/246 (18%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++IL+ IG G F +V     ++TG+  A+K+   + K+      E+      +    +G 
Sbjct: 63  FEILKVIGRGAFSEVAVVKMKQTGQVYAMKI---MNKWDMLKRGEVSCFREERDVLVNGD 119
Query: 157 R--CVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
           R    Q+   F   N++ +V E  +G  L   L K   R  P ++ R    +++  +  +
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSV 178
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H L  +H D+KP+NIL                           L +   I++ DFGS   
Sbjct: 179 HRLGYVHRDIKPDNIL---------------------------LDRCGHIRLADFGSCLK 211
Query: 274 EHQEHNY----IVSTRHYRAPEVILGLGWSY-------PCDMWSVGCILIELCSGEALFQ 322
              +        V T  Y +PE++  +G           CD W++G    E+  G+  F 
Sbjct: 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271
Query: 323 THENLE 328
                E
Sbjct: 272 ADSTAE 277

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 40/246 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
           Y++ + IG+G F +V       TG  VA+K++   +      +    E+ ++++L     
Sbjct: 17  YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNH--- 73
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V++    +    + +V E   G  ++D+L  +          R   RQ++  V +
Sbjct: 74  --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQY 129
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H   ++H DLK EN+L      +KI D+                          F +  
Sbjct: 130 CHQKYIVHRDLKAENLLLDGDMNIKIADF-------------------------GFSNEF 164
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
               + +    +  Y APE+  G  +  P  D+WS+G IL  L SG   F   +NL+ L 
Sbjct: 165 TVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 223
Query: 332 MMERVL 337
             ERVL
Sbjct: 224 --ERVL 227

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/333 (21%), Positives = 118/333 (35%), Gaps = 89/333 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA----MTEIDVLELLKRYD 152
           + I R +G+G FG V    +++    +A+KV+   +  +E        EI++   L+   
Sbjct: 17  FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-- 74
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 +++ N+F  R  I ++ E   P   LY  L+K+    F          +L + +
Sbjct: 75  ---PNILRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHGR--FDEQRSATFMEELADAL 128
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            + H+ ++IH D+KPEN+L      LKI D+  +  +P+                     
Sbjct: 129 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS--------------------- 167
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
                     +  T  Y  PE+I G       D+W  G +  E   G   F +       
Sbjct: 168 -----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS------- 215
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
                     P H                        T R  +   LK P   +      
Sbjct: 216 ----------PSHT----------------------ETHRRIVNVDLKFPPFLS------ 237
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
           D S     DL+  LLRY P  RL     ++HP+
Sbjct: 238 DGSK----DLISKLLRYHPPQRLPLKGVMEHPW 266

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++++   +A+KV+       +A + +  V   L+R    +S
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 66
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K     F          +L   
Sbjct: 67  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 123
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI ++  +  +P+                    
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS------------------- 164
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 165 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P             FV        EGA                      
Sbjct: 218 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 237
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 238 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    +++    +A+KV+       +A + +  V   L+R    +S
Sbjct: 7   FEIGRPLGKGKFGNVYLAREKQRKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 60
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K +   F          +L   
Sbjct: 61  HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 117
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 118 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 158
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E 
Sbjct: 159 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 211
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P  +                    EGA                      
Sbjct: 212 YKRISRVEFTFPDFV-------------------TEGAR--------------------- 231
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 232 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 260

>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 37/235 (15%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           ++ +KIG G FG++    +  T E VAIK+   IK        E       K+   +G  
Sbjct: 3   RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLE---YRFYKQLGSAGEG 58
Query: 158 CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
             Q+  +     +  +V E+LGPSL D     + R F +  V  I  QLL  + ++H   
Sbjct: 59  LPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLLSRMEYVHSKN 117
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-------- 269
           LI+ D+KPEN L                R            K   I +IDFG        
Sbjct: 118 LIYRDVKPENFLI--------------GRQGNK--------KEHVIHIIDFGLAKEYIDP 155
Query: 270 --STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
                  ++EH  +  T  Y +    LG   S   D+ ++G + +    G   +Q
Sbjct: 156 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 210

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 50/234 (21%)
Query: 98  KILRKIGEGTFGQV-LDCLDRE---TGETVAIKVVRSIK--KYREAAMTEIDVL-----E 146
           K +R +GEG FG+V L C D     TGE VA+K +++    ++R     EID+L     E
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 147 LLKRY----DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI 202
            + +Y    + +G+  +Q+           + +  LG SL D+L +++     + L    
Sbjct: 94  HIIKYKGCCEDAGAASLQL----------VMEYVPLG-SLRDYLPRHSIGLAQLLL---F 139
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+ E +A++H    IH DL   N+L  +   +KI D+ +    P     Y        
Sbjct: 140 AQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY-------- 191
Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
            +V + G             S   + APE +    + Y  D+WS G  L EL +
Sbjct: 192 -RVREDGD------------SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 89  LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLE 146
           +GE     ++ + ++G G  G V     + +G  +A K++   IK   R   + E+ VL 
Sbjct: 19  VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 77
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
               ++ +    V     F     I I  E M G SL   L+K      P  ++ ++   
Sbjct: 78  ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIA 131
Query: 206 LLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           +++ + ++ +  +++H D+KP NIL  S   +K+ D+ V+                   +
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------Q 173
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           +ID  S A      N  V TR Y +PE + G  +S   D+WS+G  L+E+  G
Sbjct: 174 LID--SMA------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS-- 154
           Y +++ IG G FG+V              ++VR     +  AM  +   E++KR D +  
Sbjct: 77  YDVVKVIGRGAFGEV--------------QLVRHKASQKVYAMKLLSKFEMIKRSDSAFF 122
Query: 155 -----------GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
                          VQ+   F    ++ +V E M G  L + +  +NY   P    +  
Sbjct: 123 WEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNYD-VPEKWAKFY 179
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
             +++  +  +H + LIH D+KP+N+L     +LK+ D+    +                
Sbjct: 180 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMK---------------- 223
Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGE 318
                   T   H +    V T  Y +PEV+   G    +   CD WSVG  L E+  G+
Sbjct: 224 -----MDETGMVHCDT--AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGD 276
Query: 319 ALF 321
             F
Sbjct: 277 TPF 279

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 191 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 243
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           +   M   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 244 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL+  NIL       K+ D+ + AR   D  Y  R      IK                
Sbjct: 304 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 346
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 347 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 191 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 243
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           +   M   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 244 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL+  NIL       K+ D+ + AR   D  Y  R      IK                
Sbjct: 304 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 346
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 347 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 191 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 243
Query: 161 IRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
           +         I IV E M   SL DFL+    +   +  + ++  Q+   +A++  +  +
Sbjct: 244 LYAVVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
           H DL+  NIL       K+ D+ + AR   D  Y  R      IK               
Sbjct: 303 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK--------------- 346
Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                  + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 347 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K++ ++G G  G+V   +    G T VA+K ++      +A + E ++++ L+       
Sbjct: 16  KLVERLGAGQAGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 68
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           R V++           I   M   SL DFL+  +     ++ + ++  Q+ E +AF+ + 
Sbjct: 69  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL       KI D+ + AR   D     R      IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDAEXTAREGAKFPIK------------ 175
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
                  + + R D   E+  +  RL W   PE   + + +++VL+
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 97  YKILRKIGEGTFG---QVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELL 148
           +++LR +G+G +G   QV       TG+  A+KV++     R A  T     E ++LE +
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           K         V +   F     + ++ E L G  L+  L +     F  D       ++ 
Sbjct: 79  KH-----PFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEIS 131
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             +  +H   +I+ DLKPENI+     ++K+ D+ +   S  D                 
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD----------------- 174
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
            G+  +          T  Y APE+++  G +   D WS+G ++ ++ +G   F T EN
Sbjct: 175 -GTVTH------XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGEN 225

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 97  YKILRKIGEGTFG---QVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELL 148
           +++LR +G+G +G   QV       TG+  A+KV++     R A  T     E ++LE +
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           K         V +   F     + ++ E L G  L+  L +     F  D       ++ 
Sbjct: 79  KH-----PFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEIS 131
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             +  +H   +I+ DLKPENI+     ++K+ D+ +   S  D                 
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD----------------- 174
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
            G+  +          T  Y APE+++  G +   D WS+G ++ ++ +G   F T EN
Sbjct: 175 -GTVTHT------FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGEN 225

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 25  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           ++  M   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 78  LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL+  NIL       K+ D+ + AR   D  Y  R      IK                
Sbjct: 138 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K+L+ IG+G FG V+  L    G  VA+K +++     +A + E  V+  L+      S 
Sbjct: 15  KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRH-----SN 66
Query: 158 CVQIRNWF-DYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
            VQ+     + +  + IV E M   SL D+LR         D + +    + E + ++  
Sbjct: 67  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
              +H DL   N+L       K+ D+ +T  + +  +  K LP                 
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 170
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                      + APE +    +S   D+WS G +L E+ S
Sbjct: 171 -----------WTAPEALREAAFSTKSDVWSFGILLWEIYS 200

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 90/243 (37%), Gaps = 53/243 (21%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR------ 150
           +K +  IG G FGQV     R  G+T    V+R +K   E A  E+  L  L        
Sbjct: 14  FKEIELIGSGGFGQVFKAKHRIDGKTY---VIRRVKYNNEKAEREVKALAKLDHVNIVHY 70
Query: 151 --------YDRSGSRCVQIRNWFDYRNHI--------CIVFEML---GPSLYDFLRKNNY 191
                   YD   S      + +D  N          C+  +M      +L  ++ K   
Sbjct: 71  NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 192 RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV 251
                 L  E+  Q+ + V ++H  +LIH DLKP NI  V  + +KI D+ +      D 
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND- 189
Query: 252 NYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 311
              KR      ++                      Y +PE I    +    D++++G IL
Sbjct: 190 --GKRTRSKGTLR----------------------YMSPEQISSQDYGKEVDLYALGLIL 225
Query: 312 IEL 314
            EL
Sbjct: 226 AEL 228

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
           ++ + ++G G  G V     + +G  +A K++   IK   R   + E+ VL     ++ +
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               V     F     I I  E M G SL   L+K      P  ++ ++   +++ + ++
Sbjct: 63  SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL 120
Query: 214 HDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            +  +++H D+KP NIL  S   +K+ D+ V+ +                  +ID  S A
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------LID--SMA 160
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 N  V TR Y +PE + G  +S   D+WS+G  L+E+  G
Sbjct: 161 ------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
           ++ + ++G G  G V     + +G  +A K++   IK   R   + E+ VL     ++ +
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               V     F     I I  E M G SL   L+K      P  ++ ++   +++ + ++
Sbjct: 63  SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL 120
Query: 214 HDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            +  +++H D+KP NIL  S   +K+ D+ V+ +                  +ID  S A
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------LID--SMA 160
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 N  V TR Y +PE + G  +S   D+WS+G  L+E+  G
Sbjct: 161 ------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
           ++ + ++G G  G V     + +G  +A K++   IK   R   + E+ VL     ++ +
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               V     F     I I  E M G SL   L+K      P  ++ ++   +++ + ++
Sbjct: 63  SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL 120
Query: 214 HDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            +  +++H D+KP NIL  S   +K+ D+ V+ +                  +ID  S A
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------LID--SMA 160
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 N  V TR Y +PE + G  +S   D+WS+G  L+E+  G
Sbjct: 161 ------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS---GSR 157
            K+GEG FG V       T  TVA+K        + AAM +I   EL +++D+     ++
Sbjct: 37  NKMGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 158 C-----VQIRNWFDYRNHICIVFE-MLGPSLYDFLR-KNNYRPFPVDLVREIGRQLLECV 210
           C     V++  +    + +C+V+  M   SL D L   +   P    +  +I +     +
Sbjct: 87  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            F+H+   IH D+K  NIL       KI D+ +   S                    F  
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 188
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           T    +    IV T  Y APE + G   +   D++S G +L+E+ +G
Sbjct: 189 TVMXSR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS---GSR 157
            K+GEG FG V       T  TVA+K        + AAM +I   EL +++D+     ++
Sbjct: 37  NKMGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 158 C-----VQIRNWFDYRNHICIVFE-MLGPSLYDFLR-KNNYRPFPVDLVREIGRQLLECV 210
           C     V++  +    + +C+V+  M   SL D L   +   P    +  +I +     +
Sbjct: 87  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            F+H+   IH D+K  NIL       KI D+ +   S                    F  
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 188
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           T    +    IV T  Y APE + G   +   D++S G +L+E+ +G
Sbjct: 189 TVMXXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 18  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 70
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           +   M   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 71  LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 130
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL+  NIL       K+ D+ + AR   D  Y  R      IK                
Sbjct: 131 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 173
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 174 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 223

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K+L+ IG+G FG V+  L    G  VA+K +++     +A + E  V+  L+      S 
Sbjct: 24  KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRH-----SN 75
Query: 158 CVQIRNWF-DYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
            VQ+     + +  + IV E M   SL D+LR         D + +    + E + ++  
Sbjct: 76  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
              +H DL   N+L       K+ D+ +T  + +  +  K LP                 
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 179
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                      + APE +    +S   D+WS G +L E+ S
Sbjct: 180 -----------WTAPEALREKKFSTKSDVWSFGILLWEIYS 209

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 25  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           +   M   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 78  LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL+  NIL       K+ D+ + AR   D  Y  R      IK                
Sbjct: 138 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 88  ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLEL 147
           A+    T+ +  L KIG G FG V  C+ R  G   AIK  RS KK    ++ E + L  
Sbjct: 2   AMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALRE 58
Query: 148 LKRYDRSG--SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPV-------D 197
           +  +   G  S  V+  + +   +H+ I  E   G SL D + + NYR           D
Sbjct: 59  VYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKD 117
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS 232
           L+ ++GR L     ++H + L+H D+KP NI F+S
Sbjct: 118 LLLQVGRGL----RYIHSMSLVHMDIKPSNI-FIS 147

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 22  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 74
Query: 161 IRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
           +         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +
Sbjct: 75  LYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
           H DL+  NIL       K+ D+ + AR   D  Y  R      IK               
Sbjct: 134 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK--------------- 177
Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                  + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 178 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 125/329 (37%), Gaps = 81/329 (24%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++I R +G+G FG V    ++++   VA+KV+   +  +E    ++   E+  +      
Sbjct: 25  FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLR-REIEIQAHLHHP 83
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             +++ N+F  R  I ++ E   P   LY  L+K+    F       I  +L + + + H
Sbjct: 84  NILRLYNYFYDRRRIYLILEY-APRGELYKELQKSCT--FDEQRTATIMEELADALMYCH 140
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
             ++IH D+KPEN+L      LKI D+  +  +P+       L + +    +D       
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS-------LRRKTMCGTLD------- 186
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
                       Y  PE+I G   +   D+W +G +  EL  G   F++  + E      
Sbjct: 187 ------------YLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE------ 228
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA 394
                                            T R  +K  LK P       Q      
Sbjct: 229 ---------------------------------TYRRIVKVDLKFPASVPTGAQ------ 249
Query: 395 GYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
               DL+  LLR++PS RL       HP+
Sbjct: 250 ----DLISKLLRHNPSERLPLAQVSAHPW 274

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
           ++ + ++G G  G V     + +G  +A K++   IK   R   + E+ VL     ++ +
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               V     F     I I  E M G SL   L+K      P  ++ ++   +++ + ++
Sbjct: 63  SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL 120
Query: 214 HDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            +  +++H D+KP NIL  S   +K+ D+ V+ +                  +ID  S A
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------LID--SMA 160
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 N  V TR Y +PE + G  +S   D+WS+G  L+E+  G
Sbjct: 161 ------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
           ++ + ++G G  G V     + +G  +A K++   IK   R   + E+ VL     ++ +
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               V     F     I I  E M G SL   L+K      P  ++ ++   +++ + ++
Sbjct: 63  SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL 120
Query: 214 HDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            +  +++H D+KP NIL  S   +K+ D+ V+ +                  +ID  S A
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------LID--SMA 160
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                 N  V TR Y +PE + G  +S   D+WS+G  L+E+  G
Sbjct: 161 ------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 192 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRH-----EKLVQ 244
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           +   M   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 245 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL+  NIL       K+ D+ +  R   D  Y  R      IK                
Sbjct: 305 RDLRAANILVGENLVCKVADFGL-GRLIEDNEYTARQGAKFPIK---------------- 347
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 348 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/338 (21%), Positives = 126/338 (37%), Gaps = 91/338 (26%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
           ++I R +G+G FG V    ++ +   +A+KV+       +A + +  V   L+R    +S
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKNSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R   I   + Y     R ++ + +  LG ++Y  L+K +   F          +L   
Sbjct: 64  HLRHPNILRLYGYFHDSTRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  ++IH D+KPEN+L  S   LKI D+  +  +P+                    
Sbjct: 121 LSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                      +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   + 
Sbjct: 162 -------RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
              + RV    P  +                    EGA                      
Sbjct: 215 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    DL+  LL+++PS R    + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 25  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
           +         I IV E M   SL DFL+    +   +  + ++  Q+   +A++  +  +
Sbjct: 78  LYAVVS-EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
           H DL+  NIL       K+ D+ + AR   D  Y  R      IK               
Sbjct: 137 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK--------------- 180
Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                  + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 39/241 (16%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKR 150
           + +  L  +G+G+FG+V+    + T E  A+K+++     +    E  M E  VL L  +
Sbjct: 20  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYR-PFPVDLVREIGRQLL 207
                    Q+ + F   + +  V E +  G  +Y   +   ++ P  V    EI   L 
Sbjct: 80  ----PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF 135
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
               F+    +I+ DLK +N++  S  ++KI D+ +   +  D                 
Sbjct: 136 ----FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD----------------- 174
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
            G T            T  Y APE+I    +    D W+ G +L E+ +G+A F+  +  
Sbjct: 175 -GVTT------KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 227
Query: 328 E 328
           E
Sbjct: 228 E 228

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 138/352 (39%), Gaps = 88/352 (25%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDR- 153
           Y+I+R + +G F +++ C   +  +  A+K      ++K R+   +  D + +  +YD  
Sbjct: 33  YRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 154 ----------SGSRCVQIRNWFDYRNHICIVFE------MLGPSLYDFLRKNNYRPF-PV 196
                         C+         + + I++E      +L    Y F+   NY  F P+
Sbjct: 91  KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 197 DLVREIGRQLLECVAFMHDLRLI-HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
            +++ I + +L   +++H+ + I H D+KP NIL                          
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL-------------------------- 184
Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTR---HYRAPEVILGLGWSY---PCDMWSVGC 309
            + K+  +K+ DFG + Y   +   I  +R    +  PE       SY     D+WS+G 
Sbjct: 185 -MDKNGRVKLSDFGESEYMVDKK--IKGSRGTYEFMPPEFFSNES-SYNGAKVDIWSLGI 240
Query: 310 ILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATS 369
            L  +      F    +L  L    R          K ++ P +    R    +P   T+
Sbjct: 241 CLYVMFYNVVPFSLKISLVELFNNIRT---------KNIEYPLD----RNHFLYP--LTN 285
Query: 370 RESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH 421
           ++S           N  + + D      ID L+  LR +P+ R+T+ DALKH
Sbjct: 286 KKST--------CSNNFLSNED------IDFLKLFLRKNPAERITSEDALKH 323

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 41/262 (15%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKR 150
           + +  L  +G+G+FG+V+    + T E  A+K+++     +    E  M E  VL L  +
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYR-PFPVDLVREIGRQLL 207
                    Q+ + F   + +  V E +  G  +Y   +   ++ P  V    EI   L 
Sbjct: 401 ----PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF 456
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
               F+    +I+ DLK +N++  S  ++KI D+ +   +  D                 
Sbjct: 457 ----FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD----------------- 495
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
            G T            T  Y APE+I    +    D W+ G +L E+ +G+A F+  +  
Sbjct: 496 -GVTT------KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 548
Query: 328 EHL-AMMERVLGPIPQHMLKRV 348
           E   ++ME  +   P+ M K  
Sbjct: 549 ELFQSIMEHNVA-YPKSMSKEA 569

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 97/237 (40%), Gaps = 34/237 (14%)
Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++ L ++G G++G+V     +E G   A+K  RS+  +R         L  +  +++ G 
Sbjct: 59  FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFR-GPKDRARKLAEVGSHEKVGQ 115
Query: 157 R--CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              CV++   ++    + +  E+ GPSL            P   V    R  L  +A +H
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGAS-LPEAQVWGYLRDTLLALAHLH 174
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST-AY 273
              L+H D+KP NI        K+ D+ +                     +++ G+  A 
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGL---------------------LVELGTAGAG 213
Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
           E QE +       Y APE++ G  +    D++S+G  ++E+     L    E  + L
Sbjct: 214 EVQEGD-----PRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K+L+ IG+G FG V+  L    G  VA+K +++     +A + E  V+  L+      S 
Sbjct: 9   KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRH-----SN 60
Query: 158 CVQIRNWF-DYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
            VQ+     + +  + IV E M   SL D+LR         D + +    + E + ++  
Sbjct: 61  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
              +H DL   N+L       K+ D+ +T  + +  +  K LP                 
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 164
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                      + APE +    +S   D+WS G +L E+ S
Sbjct: 165 -----------WTAPEALREKKFSTKSDVWSFGILLWEIYS 194

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 16  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 68
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           +   M   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 69  LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL+  NIL       K+ D+ + AR   D  Y  R      IK                
Sbjct: 129 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 171
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 172 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ ++       + VQ
Sbjct: 25  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           +   M   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 78  LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL+  NIL       K+ D+ + AR   D  Y  R      IK                
Sbjct: 138 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 41/223 (18%)
Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K+L+ IG+G FG V+  L    G  VA+K +++     +A + E  V+  L+      S 
Sbjct: 196 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRH-----SN 247
Query: 158 CVQIRNWF-DYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
            VQ+     + +  + IV E M   SL D+LR         D + +    + E + ++  
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVT--ARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
              +H DL   N+L       K+ D+ +T  A S  D     +LP               
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG---KLPVK------------- 351
Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                        + APE +    +S   D+WS G +L E+ S
Sbjct: 352 -------------WTAPEALREKKFSTKSDVWSFGILLWEIYS 381

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 14  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 66
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           +   M   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 67  LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 126
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL+  NIL       K+ D+ + AR   D  Y  R      IK                
Sbjct: 127 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 169
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 170 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           T+ +  L KIG G FG V  C+ R  G   AIK  RS KK    ++ E + L  +  +  
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 66
Query: 154 SG--SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPV-------DLVREIG 203
            G  S  V+  + +   +H+ I  E   G SL D + + NYR           DL+ ++G
Sbjct: 67  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKDLLLQVG 125
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVS 232
           R L     ++H + L+H D+KP NI F+S
Sbjct: 126 RGL----RYIHSMSLVHMDIKPSNI-FIS 149

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 42/260 (16%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---------IKKYREAA-MTEI 142
           L+ RY++   +G G   +V    D      VA+KV+R+         ++  REA     +
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 143 DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVRE 201
           +   ++  YD   +          Y     IV E + G +L D +      P       E
Sbjct: 70  NHPAIVAVYDTGEAETPA--GPLPY-----IVMEYVDGVTLRDIVHTEG--PMTPKRAIE 120
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
           +     + + F H   +IH D+KP NI+  +   +K+ D+ +                  
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ 162
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
           A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ +GE  F
Sbjct: 163 ARAIADSGNSVTQTAA---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Query: 322 QTHENLEHLAMMERVLGPIP 341
            T ++ + +A       PIP
Sbjct: 220 -TGDSPDSVAYQHVREDPIP 238

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 42/232 (18%)
Query: 101 RKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIK--KYREAAMTEIDVLELLKRYDR 153
           + +G G FG+V++      G+      VA+K+++S      +EA M+E+ ++  L +++ 
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLR--------KNNYRPFPVDLVREIGR 204
                V +     +   + ++ E      L +FLR        K + RP  +  +     
Sbjct: 112 ----IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+ + +AF+     IH D+   N+L  +    KI D+ +      D NY  +      +K
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                                 + APE I    ++   D+WS G +L E+ S
Sbjct: 228 ----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 25  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           +   M   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 78  LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   NIL       K+ D+ + AR   D  Y  R      IK                
Sbjct: 138 RDLAAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           T+ +  L KIG G FG V  C+ R  G   AIK  RS KK    ++ E + L  +  +  
Sbjct: 8   TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 64
Query: 154 SG--SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPV-------DLVREIG 203
            G  S  V+  + +   +H+ I  E   G SL D + + NYR           DL+ ++G
Sbjct: 65  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKDLLLQVG 123
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVS 232
           R L     ++H + L+H D+KP NI F+S
Sbjct: 124 RGL----RYIHSMSLVHMDIKPSNI-FIS 147

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
           T+ +  L KIG G FG V  C+ R  G   AIK  RS KK    ++ E + L  +  +  
Sbjct: 6   TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 62
Query: 154 SG--SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPV-------DLVREIG 203
            G  S  V+  + +   +H+ I  E   G SL D + + NYR           DL+ ++G
Sbjct: 63  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKDLLLQVG 121
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVS 232
           R L     ++H + L+H D+KP NI F+S
Sbjct: 122 RGL----RYIHSMSLVHMDIKPSNI-FIS 145

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 42/232 (18%)
Query: 101 RKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIKKY--REAAMTEIDVLELLKRYDR 153
           + +G G FG+V++      G+      VA+K+++S      +EA M+E+ ++  L +++ 
Sbjct: 44  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLR--------KNNYRPFPVDLVREIGR 204
                V +     +   + ++ E      L +FLR        K + RP  +  +     
Sbjct: 104 ----IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+ + +AF+     IH D+   N+L  +    KI D+ +      D NY  +      +K
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                                 + APE I    ++   D+WS G +L E+ S
Sbjct: 220 ----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 41/240 (17%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---------IKKYREAA-MTEI 142
           L+ RY++   +G G   +V    D      VA+KV+R+         ++  REA     +
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 143 DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVRE 201
           +   ++  YD   +          Y     IV E + G +L D +      P       E
Sbjct: 70  NHPAIVAVYDTGEAETPA--GPLPY-----IVMEYVDGVTLRDIVHTEG--PMTPKRAIE 120
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
           +     + + F H   +IH D+KP NIL  +   +K+ D+ +                  
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGI------------------ 162
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
           A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ +GE  F
Sbjct: 163 ARAIADSGNSVXQTAA---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 32/185 (17%)
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGR 204
           LLK+     S  +++ +WF+  +   ++ E   P   L+DF+ +        +L R    
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 164
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+LE V   H+  ++H D+K ENIL                    D+N          +K
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGELK 198
Query: 265 VIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQ 322
           +IDFGS A  +   +     TR Y  PE I    +      +WS+G +L ++  G+  F+
Sbjct: 199 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
Query: 323 THENL 327
             E +
Sbjct: 259 HDEEI 263

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 49/255 (19%)
Query: 81  KDGHYLFALGENLTSRYKILRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYR 135
           K GH+    GE    +  +LR++G+G+FG V      D +  E    VA+K V      R
Sbjct: 2   KKGHHHHHHGEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 61
Query: 136 EAA--MTEIDVLELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR-- 187
           E    + E  V++        G  C   V++           +V E++    L  +LR  
Sbjct: 62  ERIEFLNEASVMK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 113
Query: 188 -----KNNYRPFP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
                 N  RP P +  + ++  ++ + +A+++  + +H DL   N +      +KI D+
Sbjct: 114 RPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDF 173
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
            +T R   + +YY++  K                     ++  R + APE +    ++  
Sbjct: 174 GMT-RDIYETDYYRKGGKG--------------------LLPVR-WMAPESLKDGVFTTS 211
Query: 302 CDMWSVGCILIELCS 316
            DMWS G +L E+ S
Sbjct: 212 SDMWSFGVVLWEITS 226

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 135/351 (38%), Gaps = 86/351 (24%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL----- 145
           +NL    KIL   G G+ G V+       G  VA+K  R +  + + A+ EI +L     
Sbjct: 32  KNLVVSEKIL---GYGSSGTVV-FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 146 --ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE-- 201
              +++ Y      C +  + F Y     I  E+   +L D +   N     + L +E  
Sbjct: 86  HPNVIRYY------CSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYN 134
Query: 202 ---IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
              + RQ+   VA +H L++IH DLKP+NIL  +         + TA   T     + L 
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILI 187
Query: 259 KSSAI-KVIDFGSTAYEHQEHNYIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILIEL 314
               + K +D G   +    +N    T  +RAPE++        +   D++S+GC+   +
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNN-PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 315 CS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESI 373
            S G+  F                               +K+ R   +           I
Sbjct: 247 LSKGKHPF------------------------------GDKYSRESNI-----------I 265
Query: 374 KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           + +  L  ++ L   H         DL+  ++ +DP  R TA   L+HP F
Sbjct: 266 RGIFSLDEMKCL---HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 135/351 (38%), Gaps = 86/351 (24%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL----- 145
           +NL    KIL   G G+ G V+       G  VA+K  R +  + + A+ EI +L     
Sbjct: 32  KNLVVSEKIL---GYGSSGTVV-FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 146 --ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE-- 201
              +++ Y      C +  + F Y     I  E+   +L D +   N     + L +E  
Sbjct: 86  HPNVIRYY------CSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYN 134
Query: 202 ---IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
              + RQ+   VA +H L++IH DLKP+NIL  +         + TA   T     + L 
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILI 187
Query: 259 KSSAI-KVIDFGSTAYEHQEHNYIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILIEL 314
               + K +D G   +    +N    T  +RAPE++        +   D++S+GC+   +
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNN-PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 315 CS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESI 373
            S G+  F                               +K+ R   +           I
Sbjct: 247 LSKGKHPF------------------------------GDKYSRESNI-----------I 265
Query: 374 KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           + +  L  ++ L   H         DL+  ++ +DP  R TA   L+HP F
Sbjct: 266 RGIFSLDEMKCL---HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           + ++G G +G V       +G+ +A+K +R+    +E     +D+   ++  D   +  V
Sbjct: 56  IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT--V 113
Query: 160 QIRNWFDYRNHICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHD-L 216
                      + I  E++  SL  F ++  +  +  P D++ +I   +++ +  +H  L
Sbjct: 114 TFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
            +IH D+KP N+L  +   +K+ D+ ++        Y       S  K ID G       
Sbjct: 174 SVIHRDVKPSNVLINALGQVKMCDFGISG-------YL----VDSVAKTIDAG------- 215
Query: 277 EHNYIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILIELC 315
                   + Y APE I       G+S   D+WS+G  +IEL 
Sbjct: 216 -------CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 251

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           + ++G G +G V       +G+ +A+K +R+    +E     +D+   ++  D   +  V
Sbjct: 12  IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT--V 69
Query: 160 QIRNWFDYRNHICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHD-L 216
                      + I  E++  SL  F ++  +  +  P D++ +I   +++ +  +H  L
Sbjct: 70  TFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
            +IH D+KP N+L  +   +K+ D+ ++     DV            K ID G       
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA-----------KDIDAG------- 171
Query: 277 EHNYIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILIELC 315
                   + Y APE I       G+S   D+WS+G  +IEL 
Sbjct: 172 -------CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 207

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 127/332 (38%), Gaps = 65/332 (19%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLKRYDRSGSRCVQI 161
           +GEG   +V  C++  T +  A+K++     + R     E+++L     Y   G R V  
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEML-----YQCQGHRNVLE 75
Query: 162 RNWFDYR-NHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
              F    +   +VFE M G S+   + K   R F       + + +   + F+H+  + 
Sbjct: 76  LIEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 220 HTDLKPENILFVSPEY---LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           H DLKPENIL   P     +KI D+ +                 S IK ++   +     
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDL----------------GSGIK-LNGDCSPISTP 176
Query: 277 EHNYIVSTRHYRAPEVILGLG-----WSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
           E      +  Y APEV+         +   CD+WS+G IL  L SG   F      +   
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD-CG 235
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
                  P  Q+ML        + ++ G+ ++P+   +  S  A                
Sbjct: 236 WDRGEACPACQNMLF-------ESIQEGKYEFPDKDWAHISCAAK--------------- 273
Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                  DL+  LL  D   RL+A   L+HP+
Sbjct: 274 -------DLISKLLVRDAKQRLSAAQVLQHPW 298

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 127/332 (38%), Gaps = 65/332 (19%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLKRYDRSGSRCVQI 161
           +GEG   +V  C++  T +  A+K++     + R     E+++L     Y   G R V  
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEML-----YQCQGHRNVLE 75
Query: 162 RNWFDYR-NHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
              F    +   +VFE M G S+   + K   R F       + + +   + F+H+  + 
Sbjct: 76  LIEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 220 HTDLKPENILFVSPEY---LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           H DLKPENIL   P     +KI D+ +                 S IK ++   +     
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGL----------------GSGIK-LNGDCSPISTP 176
Query: 277 EHNYIVSTRHYRAPEVILGLG-----WSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
           E      +  Y APEV+         +   CD+WS+G IL  L SG   F      +   
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD-CG 235
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
                  P  Q+ML        + ++ G+ ++P+   +  S  A                
Sbjct: 236 WDRGEACPACQNMLF-------ESIQEGKYEFPDKDWAHISCAAK--------------- 273
Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                  DL+  LL  D   RL+A   L+HP+
Sbjct: 274 -------DLISKLLVRDAKQRLSAAQVLQHPW 298

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 37/246 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYDRSG 155
            R +G G FG+V  C  + TG+  A K +   +  +    + AM E  +L   K + R  
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA--KVHSRF- 246
Query: 156 SRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRP-FPVDLVREIGRQLLECVAF 212
              V +   F+ +  +C+V  ++  G   Y     +   P F          Q++  +  
Sbjct: 247 --IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H   +I+ DLKPEN+L      ++I D  +               K+   K   +  T 
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH-ENLEHLA 331
                         + APE++LG  + +  D +++G  L E+ +    F+   E +E+  
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 332 MMERVL 337
           + +RVL
Sbjct: 401 LKQRVL 406

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 80/355 (22%), Positives = 137/355 (38%), Gaps = 90/355 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL----- 145
           +NL    KIL   G G+ G V+       G  VA+K  R +  + + A+ EI +L     
Sbjct: 14  KNLVVSEKIL---GYGSSGTVV-FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESDD 67
Query: 146 --ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE-- 201
              +++ Y      C +  + F Y     I  E+   +L D +   N     + L +E  
Sbjct: 68  HPNVIRYY------CSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYN 116
Query: 202 ---IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
              + RQ+   VA +H L++IH DLKP+NIL  +         + TA   T     + L 
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILI 169
Query: 259 KSSAI-KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-------WSYPCDMWSVGCI 310
               + K +D G +++    +N    T  +RAPE++            +   D++S+GC+
Sbjct: 170 SDFGLCKKLDSGQSSFRTNLNN-PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 311 LIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKP-AEKFVRRGRLDWPEGATS 369
                                           ++L +   P  +K+ R   +        
Sbjct: 229 FY------------------------------YILSKGKHPFGDKYSRESNI-------- 250
Query: 370 RESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
              I+ +  L  ++ L   H         DL+  ++ +DP  R TA   L+HP F
Sbjct: 251 ---IRGIFSLDEMKCL---HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 98/237 (41%), Gaps = 34/237 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 25  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPS-LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
           +         I IV E +    L DFL+    +   +  + ++  Q+   +A++  +  +
Sbjct: 78  LYAVVS-EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
           H DL+  NIL       K+ D+ + AR   D  Y  R      IK               
Sbjct: 137 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK--------------- 180
Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                  + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 37/246 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYDRSG 155
            R +G G FG+V  C  + TG+  A K +   +  +    + AM E  +L   K + R  
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA--KVHSRF- 246
Query: 156 SRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRP-FPVDLVREIGRQLLECVAF 212
              V +   F+ +  +C+V  ++  G   Y     +   P F          Q++  +  
Sbjct: 247 --IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H   +I+ DLKPEN+L      ++I D  +               K+   K   +  T 
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH-ENLEHLA 331
                         + APE++LG  + +  D +++G  L E+ +    F+   E +E+  
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 332 MMERVL 337
           + +RVL
Sbjct: 401 LKQRVL 406

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 61/250 (24%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R K+ + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+   P
Sbjct: 79  GHHLNVVNLLGACTKPGGPLMVITEFCKFGNL----------STYLRSKRNEFVPYKVAP 128
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
            DL ++            Q+ + + F+   + IH DL   NIL      +KI D+ +   
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
              D +Y ++      +K                      + APE I    ++   D+WS
Sbjct: 189 IYKDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 226
Query: 307 VGCILIELCS 316
            G +L E+ S
Sbjct: 227 FGVLLWEIFS 236

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 37/246 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYDRSG 155
            R +G G FG+V  C  + TG+  A K +   +  +    + AM E  +L   K + R  
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA--KVHSRF- 246
Query: 156 SRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRP-FPVDLVREIGRQLLECVAF 212
              V +   F+ +  +C+V  ++  G   Y     +   P F          Q++  +  
Sbjct: 247 --IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H   +I+ DLKPEN+L      ++I D  +               K+   K   +  T 
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH-ENLEHLA 331
                         + APE++LG  + +  D +++G  L E+ +    F+   E +E+  
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 332 MMERVL 337
           + +RVL
Sbjct: 401 LKQRVL 406

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 22  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 74
Query: 161 IRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
           +         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +
Sbjct: 75  LYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
           H DL+  NIL       K+ D+ + AR   D  +  R      IK               
Sbjct: 134 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEWTARQGAKFPIK--------------- 177
Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                  + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 178 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 54/234 (23%)
Query: 98  KILRKIGEGTFGQV-LDCLDRE---TGETVAIKVVR--SIKKYREAAMTEIDVL-----E 146
           K +R +GEG FG+V L C D     TGE VA+K ++     + R     EI++L     E
Sbjct: 12  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 147 LLKRY----DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI 202
            + +Y    +  G + VQ+           + +  LG SL D+L ++      V L + +
Sbjct: 72  HIVKYKGCCEDQGEKSVQL----------VMEYVPLG-SLRDYLPRHC-----VGLAQLL 115
Query: 203 --GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
              +Q+ E +A++H    IH  L   N+L  +   +KI D+ +    P    YY      
Sbjct: 116 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY------ 169
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
              +V + G             S   + APE +    + Y  D+WS G  L EL
Sbjct: 170 ---RVREDGD------------SPVFWYAPECLKECKFYYASDVWSFGVTLYEL 208

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 61/250 (24%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R K+ + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+   P
Sbjct: 79  GHHLNVVNLLGACTKPGGPLMVITEFCKFGNL----------STYLRSKRNEFVPYKVAP 128
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
            DL ++            Q+ + + F+   + IH DL   NIL      +KI D+ +   
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
              D +Y ++      +K                      + APE I    ++   D+WS
Sbjct: 189 IYKDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 226
Query: 307 VGCILIELCS 316
            G +L E+ S
Sbjct: 227 FGVLLWEIFS 236

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 54/234 (23%)
Query: 98  KILRKIGEGTFGQV-LDCLDRE---TGETVAIKVVR--SIKKYREAAMTEIDVL-----E 146
           K +R +GEG FG+V L C D     TGE VA+K ++     + R     EI++L     E
Sbjct: 11  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 147 LLKRY----DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI 202
            + +Y    +  G + VQ+           + +  LG SL D+L ++      V L + +
Sbjct: 71  HIVKYKGCCEDQGEKSVQL----------VMEYVPLG-SLRDYLPRHC-----VGLAQLL 114
Query: 203 --GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
              +Q+ E +A++H    IH  L   N+L  +   +KI D+ +    P    YY      
Sbjct: 115 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY------ 168
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
              +V + G             S   + APE +    + Y  D+WS G  L EL
Sbjct: 169 ---RVREDGD------------SPVFWYAPECLKECKFYYASDVWSFGVTLYEL 207

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 46/264 (17%)
Query: 97  YKILRKIGEGTFGQVL---DCLDRETGETVAIKVVRSIK-----KYREAAMTEIDVLELL 148
           +++L+ +G G +G+V         +TG+  A+KV++        K  E   TE  VLE  
Sbjct: 56  FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE-- 113
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFL-RKNNYRPFPVDLVREIGRQL 206
             + R     V +   F     + ++ + + G  L+  L ++  +    V +   +G  +
Sbjct: 114 --HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIY--VGEIV 169
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L  +  +H L +I+ D+K ENIL  S  ++ + D+ ++                    V 
Sbjct: 170 L-ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-----------------VA 211
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEALFQTH 324
           D    AY+         T  Y AP+++ G   G     D WS+G ++ EL +G + F   
Sbjct: 212 DETERAYD------FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265
Query: 325 -ENLEHLAMMERVLG---PIPQHM 344
            E      +  R+L    P PQ M
Sbjct: 266 GEKNSQAEISRRILKSEPPYPQEM 289

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
           S    +++IG G FG V        G  +    V +IK  RE AM+E D +E  +   + 
Sbjct: 7   SELTFVQEIGSGQFGLV------HLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEVMMKL 59
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
           S  + VQ+      +  IC+VFE +    L D+LR      F  + +  +   + E +A+
Sbjct: 60  SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 118
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           + +  +IH DL   N L    + +K+ D+ +T R   D  Y         +K        
Sbjct: 119 LEEASVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVK-------- 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
                         + +PEV     +S   D+WS G ++ E+ S G+  ++   N E
Sbjct: 170 --------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 41/240 (17%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---------IKKYREAA-MTEI 142
           L+ RY++   +G G   +V    D      VA+KV+R+         ++  REA     +
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 143 DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVRE 201
           +   ++  YD   +          Y     IV E + G +L D +      P       E
Sbjct: 70  NHPAIVAVYDTGEAETPA--GPLPY-----IVMEYVDGVTLRDIVHTEG--PMTPKRAIE 120
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
           +     + + F H   +IH D+KP NI+  +   +K+ D+ +                  
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ 162
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
           A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ +GE  F
Sbjct: 163 ARAIADSGNSVTQTAA---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 46/230 (20%)
Query: 98  KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++L K+G+G+FG V     D  +G+TV++    ++K  +   +++ + ++   R      
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 71
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
             V   +  D+RN I +   +L P            SL D LRK+    F +  +     
Sbjct: 72  --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 128
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+ E + ++   R IH DL   N+L  + + +KI D+ +    P + ++Y          
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV--------- 179
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                      QEH  +     + APE +    +S+  D W  G  L E+
Sbjct: 180 ----------MQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 217

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 129/322 (40%), Gaps = 70/322 (21%)
Query: 67  GLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGE-TVAI 125
           G A  G   W  D KD          LT     L+++G G FG V     +  G+  VAI
Sbjct: 1   GTAGLGYGSWEIDPKD----------LT----FLKELGTGQFGVVK--YGKWRGQYDVAI 44
Query: 126 KVVRSIKKYREAAMTEIDVLELLK-RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLY 183
           K+++      E +M+E + +E  K   + S  + VQ+      +  I I+ E M    L 
Sbjct: 45  KMIK------EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 98
Query: 184 DFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV 243
           ++LR+  +R F    + E+ + + E + ++   + +H DL   N L              
Sbjct: 99  NYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL-------------- 143
Query: 244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYE-HQEHNYIVSTR---HYRAPEVILGLGWS 299
                        +     +KV DFG + Y    E+   V ++    +  PEV++   +S
Sbjct: 144 -------------VNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 300 YPCDMWSVGCILIELCSGEAL----FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKF 355
              D+W+ G ++ E+ S   +    F   E  EH+A   R+  P   H+       +EK 
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP---HL------ASEKV 241
Query: 356 VRRGRLDWPEGATSRESIKAVL 377
                  W E A  R + K +L
Sbjct: 242 YTIMYSCWHEKADERPTFKILL 263

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 43/227 (18%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS---GSR 157
            K+GEG FG V       T  TVA+K        + AAM +I   EL +++D+     ++
Sbjct: 31  NKMGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 80
Query: 158 C-----VQIRNWFDYRNHICIVFE-MLGPSLYDFLR-KNNYRPFPVDLVREIGRQLLECV 210
           C     V++  +    + +C+V+  M   SL D L   +   P    +  +I +     +
Sbjct: 81  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 140
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            F+H+   IH D+K  NIL       KI D+ +            R  +  A  V+    
Sbjct: 141 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLA-----------RASEKFAQXVM---- 185
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                     IV T  Y APE + G   +   D++S G +L+E+ +G
Sbjct: 186 -------XXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 224

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 25  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           +   M    L DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 78  LYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL+  NIL       K+ D+ + AR   D  Y  R      IK                
Sbjct: 138 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           ++ +G G FG V   +    GE V I V   + +   +     ++L+        GS  V
Sbjct: 22  VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 160 QIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
                    + + +V +++    L D +R+N  R    DL+     Q+ + ++++ D+RL
Sbjct: 82  SRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWC-MQIAKGMSYLEDVRL 140
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           +H DL   N+L  SP ++KI D+ +                    +++D   T Y H + 
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLA-------------------RLLDIDETEY-HADG 180
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
             +     + A E IL   +++  D+WS G  + EL +
Sbjct: 181 GKV--PIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 37/246 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYDRSG 155
            R +G G FG+V  C  + TG+  A K +   +  +    + AM E  +L   K + R  
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA--KVHSRF- 246
Query: 156 SRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRP-FPVDLVREIGRQLLECVAF 212
              V +   F+ +  +C+V  ++  G   Y     +   P F          Q++  +  
Sbjct: 247 --IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H   +I+ DLKPEN+L      ++I D  +               K+   K   +  T 
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH-ENLEHLA 331
                         + APE++LG  + +  D +++G  L E+ +    F+   E +E+  
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 332 MMERVL 337
           + +RVL
Sbjct: 401 LKQRVL 406

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 46/230 (20%)
Query: 98  KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++L K+G+G+FG V     D  +G+TV++    ++K  +   +++ + ++   R      
Sbjct: 15  RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 65
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
             V   +  D+RN I +   +L P            SL D LRK+    F +  +     
Sbjct: 66  --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 122
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+ E + ++   R IH DL   N+L  + + +KI D+ +    P + ++Y          
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM-------- 174
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                      QEH  +     + APE +    +S+  D W  G  L E+
Sbjct: 175 -----------QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 211

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 25  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
           +           ++  M   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 78  LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL+  NIL       K+ D+ + AR   D     R      IK                
Sbjct: 138 RDLRAANILVGENLVCKVADFGL-ARLIEDNEXTARQGAKFPIK---------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                 + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 39/276 (14%)
Query: 98  KILRKIGEGTFGQV-LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K+++++G G FG+V +   +  T   VA+K ++      +A + E ++++ L+       
Sbjct: 16  KLVKRLGAGQFGEVWMGYYNNST--KVAVKTLKPGTMSVQAFLEEANLMKTLQH-----D 68
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + V++         I I+ E M   SL DFL+ +      +  + +   Q+ E +A++  
Sbjct: 69  KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 128
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
              IH DL+  N+L       KI D+ + AR   D  Y  R      IK           
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGL-ARVIEDNEYTAREGAKFPIK----------- 176
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMME 334
                      + APE I    ++   D+WS G +L E+ + G+  +    N + +  + 
Sbjct: 177 -----------WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALS 225
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSR 370
           +       + + RV+   ++     ++ W E A  R
Sbjct: 226 Q------GYRMPRVENCPDELYDIMKMCWKEKAEER 255

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 41/240 (17%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---------IKKYREAA-MTEI 142
           L+ RY++   +G G   +V    D      VA+KV+R+         ++  REA     +
Sbjct: 10  LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 143 DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVRE 201
           +   ++  YD   +          Y     IV E + G +L D +      P       E
Sbjct: 70  NHPAIVAVYDTGEAETPA--GPLPY-----IVMEYVDGVTLRDIVHTEG--PMTPKRAIE 120
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
           +     + + F H   +IH D+KP NI+  +   +K+ D+ +                  
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ 162
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
           A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ +GE  F
Sbjct: 163 ARAIADSGNSVTQTAA---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 61/250 (24%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R K+ + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 30  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+   P
Sbjct: 90  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKEAP 139
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
            DL ++            Q+ + + F+   + IH DL   NIL      +KI D+ +   
Sbjct: 140 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 199
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
              D +Y ++      +K                      + APE I    ++   D+WS
Sbjct: 200 IYKDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 237
Query: 307 VGCILIELCS 316
            G +L E+ S
Sbjct: 238 FGVLLWEIFS 247

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 61/250 (24%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R K+ + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 65  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 124
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+   P
Sbjct: 125 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKVAP 174
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
            DL ++            Q+ + + F+   + IH DL   NIL      +KI D+ +   
Sbjct: 175 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 234
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
              D +Y ++      +K                      + APE I    ++   D+WS
Sbjct: 235 IYKDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 272
Query: 307 VGCILIELCS 316
            G +L E+ S
Sbjct: 273 FGVLLWEIFS 282

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 46/230 (20%)
Query: 98  KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++L K+G+G+FG V     D  +G+TV++    ++K  +   +++ + ++   R      
Sbjct: 15  RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 65
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
             V   +  D+RN I +   +L P            SL D LRK+    F +  +     
Sbjct: 66  --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 122
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+ E + ++   R IH DL   N+L  + + +KI D+ +    P + ++Y          
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV--------- 173
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                      QEH  +     + APE +    +S+  D W  G  L E+
Sbjct: 174 ----------MQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 211

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 46/230 (20%)
Query: 98  KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++L K+G+G+FG V     D  +G+TV++    ++K  +   +++ + ++   R      
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 61
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
             V   +  D+RN I +   +L P            SL D LRK+    F +  +     
Sbjct: 62  --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+ E + ++   R IH DL   N+L  + + +KI D+ +    P + ++Y          
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM-------- 170
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                      QEH  +     + APE +    +S+  D W  G  L E+
Sbjct: 171 -----------QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 97/241 (40%), Gaps = 41/241 (17%)
Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---------IKKYREAA-MTE 141
           +L+ RY++   +G G   +V    D      VA+KV+R+         ++  REA     
Sbjct: 26  HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 85
Query: 142 IDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVR 200
           ++   ++  YD   +          Y     IV E + G +L D +      P       
Sbjct: 86  LNHPAIVAVYDTGEAETPA--GPLPY-----IVMEYVDGVTLRDIVHTEG--PMTPKRAI 136
Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
           E+     + + F H   +IH D+KP NI+  +   +K+ D+ +                 
Sbjct: 137 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI----------------- 179
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ +GE  
Sbjct: 180 -ARAIADSGNSVTQTAA---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
Query: 321 F 321
           F
Sbjct: 236 F 236

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 46/230 (20%)
Query: 98  KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++L K+G+G+FG V     D  +G+TV++    ++K  +   +++ + ++   R      
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 61
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
             V   +  D+RN I +   +L P            SL D LRK+    F +  +     
Sbjct: 62  --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+ E + ++   R IH DL   N+L  + + +KI D+ +    P + ++Y          
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM-------- 170
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
                      QEH  +     + APE +    +S+  D W  G  L E+
Sbjct: 171 -----------QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 21/121 (17%)
Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
           E+     + + F H   +IH D+KP NI+  +   +K+ D+ +                 
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI----------------- 162
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ +GE  
Sbjct: 163 -ARAIADSGNSVTQTAA---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 321 F 321
           F
Sbjct: 219 F 219

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 61/250 (24%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R K+ + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+   P
Sbjct: 88  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKVAP 137
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
            DL ++            Q+ + + F+   + IH DL   NIL      +KI D+ +   
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
              D +Y ++      +K                      + APE I    ++   D+WS
Sbjct: 198 IYKDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 235
Query: 307 VGCILIELCS 316
            G +L E+ S
Sbjct: 236 FGVLLWEIFS 245

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 34/237 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           K+G+G FG+V   +    G T VAIK ++      EA + E  V++ L+       + VQ
Sbjct: 15  KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 67
Query: 161 IRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
           +         I IV E M   SL DFL+    +   +  + ++  Q+   +A++  +  +
Sbjct: 68  LYAVVS-EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 126
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
           H DL+  NIL       K+ D+ + AR   D     R      IK               
Sbjct: 127 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEXTARQGAKFPIK--------------- 170
Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                  + APE  L   ++   D+WS G +L EL + G   +    N E L  +ER
Sbjct: 171 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 121/290 (41%), Gaps = 56/290 (19%)
Query: 99  ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
            L+++G G FG V     +  G+  VAIK+++      E +M+E + +E  K   + S  
Sbjct: 28  FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSHE 79
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + VQ+      +  I I+ E M    L ++LR+  +R F    + E+ + + E + ++  
Sbjct: 80  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 138
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE- 274
            + +H DL   N L                     VN          +KV DFG + Y  
Sbjct: 139 KQFLHRDLAARNCL---------------------VN------DQGVVKVSDFGLSRYVL 171
Query: 275 HQEHNYIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL----FQTHENL 327
             E+   V ++    +  PEV++   +S   D+W+ G ++ E+ S   +    F   E  
Sbjct: 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
           EH+A   R+  P   H+       +EK        W E A  R + K +L
Sbjct: 232 EHIAQGLRLYRP---HL------ASEKVYTIMYSCWHEKADERPTFKILL 272

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
           S    +++IG G FG V        G  +    V +IK  RE AM+E D +E  +   + 
Sbjct: 10  SELTFVQEIGSGQFGLV------HLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEVMMKL 62
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
           S  + VQ+      +  IC+VFE +    L D+LR      F  + +  +   + E +A+
Sbjct: 63  SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 121
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           + +  +IH DL   N L    + +K+ D+ +T R   D  Y         +K        
Sbjct: 122 LEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVK-------- 172
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
                         + +PEV     +S   D+WS G ++ E+ S G+  ++   N E
Sbjct: 173 --------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
           S    +++IG G FG V        G  +    V +IK  RE AM+E D +E  +   + 
Sbjct: 7   SELTFVQEIGSGQFGLV------HLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEVMMKL 59
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
           S  + VQ+      +  IC+VFE +    L D+LR      F  + +  +   + E +A+
Sbjct: 60  SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 118
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           + +  +IH DL   N L    + +K+ D+ +T R   D  Y         +K        
Sbjct: 119 LEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVK-------- 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
                         + +PEV     +S   D+WS G ++ E+ S G+  ++   N E
Sbjct: 170 --------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 59/248 (23%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R K+ + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 30  RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF-PVD 197
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+ P D
Sbjct: 90  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKPED 139
Query: 198 LVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP 248
           L ++            Q+ + + F+   + IH DL   NIL      +KI D+ +     
Sbjct: 140 LYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVG 308
            D +  ++      +K                      + APE I    ++   D+WS G
Sbjct: 200 KDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 237
Query: 309 CILIELCS 316
            +L E+ S
Sbjct: 238 VLLWEIFS 245

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 32/221 (14%)
Query: 98  KILRKIGEGTFGQV-LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           K+++K+G G FG+V +   +  T   VA+K ++      +A + E ++++ L+       
Sbjct: 15  KLVKKLGAGQFGEVWMGYYNNST--KVAVKTLKPGTMSVQAFLEEANLMKTLQH-----D 67
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + V++         I I+ E +   SL DFL+ +      +  + +   Q+ E +A++  
Sbjct: 68  KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
              IH DL+  N+L       KI D+ + AR   D  Y  R      IK           
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGL-ARVIEDNEYTAREGAKFPIK----------- 175
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                      + APE I    ++   ++WS G +L E+ +
Sbjct: 176 -----------WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 45/258 (17%)
Query: 98  KILRKIGEGTFGQVLDC-LDRE---TGETVAIKVVR--SIKKYREAAMTEIDVLELL--K 149
           K +R +GEG FG+V  C  D E   TGE VA+K ++  S   +      EI++L  L  +
Sbjct: 12  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI--GRQL 206
              +    C +     D  N I ++ E L   SL ++L KN  +   ++L +++    Q+
Sbjct: 72  NIVKYKGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQI 123
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
            + + ++   + +H DL   N+L  S   +KI D+ +T    TD        K       
Sbjct: 124 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD--------KEXXTVKD 175
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           D  S  +             + APE ++   +    D+WS G  L EL     L     +
Sbjct: 176 DRDSPVF-------------WYAPECLMQSKFYIASDVWSFGVTLHEL-----LTYCDSD 217
Query: 327 LEHLAMMERVLGPIPQHM 344
              +A+  +++GP    M
Sbjct: 218 SSPMALFLKMIGPTHGQM 235

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 121/290 (41%), Gaps = 56/290 (19%)
Query: 99  ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
            L+++G G FG V     +  G+  VAIK+++      E +M+E + +E  K   + S  
Sbjct: 8   FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSHE 59
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + VQ+      +  I I+ E M    L ++LR+  +R F    + E+ + + E + ++  
Sbjct: 60  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 118
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE- 274
            + +H DL   N L                     VN          +KV DFG + Y  
Sbjct: 119 KQFLHRDLAARNCL---------------------VN------DQGVVKVSDFGLSRYVL 151
Query: 275 HQEHNYIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL----FQTHENL 327
             E+   V ++    +  PEV++   +S   D+W+ G ++ E+ S   +    F   E  
Sbjct: 152 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 211
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
           EH+A   R+  P   H+       +EK        W E A  R + K +L
Sbjct: 212 EHIAQGLRLYRP---HL------ASEKVYTIMYSCWHEKADERPTFKILL 252

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 45/258 (17%)
Query: 98  KILRKIGEGTFGQVLDC-LDRE---TGETVAIKVVRSIKKYREAA--MTEIDVLELL--K 149
           K +R +GEG FG+V  C  D E   TGE VA+K ++        A    EI++L  L  +
Sbjct: 24  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI--GRQL 206
              +    C +     D  N I ++ E L   SL ++L KN  +   ++L +++    Q+
Sbjct: 84  NIVKYKGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQI 135
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
            + + ++   + +H DL   N+L  S   +KI D+ +T    TD        K       
Sbjct: 136 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD--------KEXXTVKD 187
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           D  S  +             + APE ++   +    D+WS G  L EL     L     +
Sbjct: 188 DRDSPVF-------------WYAPECLMQSKFYIASDVWSFGVTLHEL-----LTYCDSD 229
Query: 327 LEHLAMMERVLGPIPQHM 344
              +A+  +++GP    M
Sbjct: 230 SSPMALFLKMIGPTHGQM 247

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
           S    +++IG G FG V        G  +    V +IK  RE AM+E D +E  +   + 
Sbjct: 5   SELTFVQEIGSGQFGLV------HLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEVMMKL 57
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
           S  + VQ+      +  IC+VFE +    L D+LR      F  + +  +   + E +A+
Sbjct: 58  SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 116
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           + +  +IH DL   N L    + +K+ D+ +T R   D  Y         +K        
Sbjct: 117 LEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVK-------- 167
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
                         + +PEV     +S   D+WS G ++ E+ S G+  ++   N E
Sbjct: 168 --------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
           +V EM  LGP L  +L++N  R      + E+  Q+   + ++ +   +H DL   N+L 
Sbjct: 447 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 503
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
           V+  Y KI D+ ++     D NYYK                    Q H        + AP
Sbjct: 504 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 542
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
           E I    +S   D+WS G ++ E  S G+  ++  +  E  AM+E+
Sbjct: 543 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 588

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 56/290 (19%)
Query: 99  ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
            L+++G G FG V     +  G+  VAIK+++      E +M+E + +E  K   + S  
Sbjct: 28  FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSHE 79
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + VQ+      +  I I+ E M    L ++LR+  +R F    + E+ + + E + ++  
Sbjct: 80  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 138
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY-- 273
            + +H DL   N L                     VN          +KV DFG + Y  
Sbjct: 139 KQFLHRDLAARNCL---------------------VN------DQGVVKVSDFGLSRYVL 171
Query: 274 EHQEHNYIVST--RHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL----FQTHENL 327
           + +E + + S     +  PEV++   +S   D+W+ G ++ E+ S   +    F   E  
Sbjct: 172 DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
           EH+A   R+  P   H+       +EK        W E A  R + K +L
Sbjct: 232 EHIAQGLRLYRP---HL------ASEKVYTIMYSCWHEKADERPTFKILL 272

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 56/290 (19%)
Query: 99  ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
            L+++G G FG V     +  G+  VAIK+++      E +M+E + +E  K   + S  
Sbjct: 13  FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSHE 64
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + VQ+      +  I I+ E M    L ++LR+  +R F    + E+ + + E + ++  
Sbjct: 65  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 123
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE- 274
            + +H DL   N L                           +     +KV DFG + Y  
Sbjct: 124 KQFLHRDLAARNCL---------------------------VNDQGVVKVSDFGLSRYVL 156
Query: 275 HQEHNYIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL----FQTHENL 327
             E+   V ++    +  PEV++   +S   D+W+ G ++ E+ S   +    F   E  
Sbjct: 157 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
           EH+A   R+  P   H+       +EK        W E A  R + K +L
Sbjct: 217 EHIAQGLRLYRP---HL------ASEKVYTIMYSCWHEKADERPTFKILL 257

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 46/230 (20%)
Query: 98  KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++L K+G+G+FG V     D  +G+TV++    ++K  +   +++ + ++   R      
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 71
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
             V   +  D+RN I +   +L P            SL D LRK+    F +  +     
Sbjct: 72  --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 128
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+ E + ++   R IH DL   N+L  + + +KI D+ +           + LP++    
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL----------MRALPQNDDHX 178
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
           V+         QEH  +     + APE +    +S+  D W  G  L E+
Sbjct: 179 VM---------QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 217

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 135/355 (38%), Gaps = 90/355 (25%)
Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL----- 145
           +NL    KIL   G G+ G V+       G  VA+K  R +  + + A+ EI +L     
Sbjct: 14  KNLVVSEKIL---GYGSSGTVV-FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESDD 67
Query: 146 --ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE-- 201
              +++ Y      C +  + F Y     I  E+   +L D +   N     + L +E  
Sbjct: 68  HPNVIRYY------CSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYN 116
Query: 202 ---IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
              + RQ+   VA +H L++IH DLKP+NIL  +         + TA   T     + L 
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILI 169
Query: 259 KSSAI-KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-------WSYPCDMWSVGCI 310
               + K +D G   +    +N    T  +RAPE++            +   D++S+GC+
Sbjct: 170 SDFGLCKKLDSGQXXFRXNLNN-PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 311 LIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATS 369
              + S G+  F                               +K+ R   +        
Sbjct: 229 FYYILSKGKHPF------------------------------GDKYSRESNI-------- 250
Query: 370 RESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
              I+ +  L  ++ L   H         DL+  ++ +DP  R TA   L+HP F
Sbjct: 251 ---IRGIFSLDEMKCL---HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
           +V EM  LGP L  +L++N  R      + E+  Q+   + ++ +   +H DL   N+L 
Sbjct: 446 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 502
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
           V+  Y KI D+ ++     D NYYK                    Q H        + AP
Sbjct: 503 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 541
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
           E I    +S   D+WS G ++ E  S G+  ++  +  E  AM+E+
Sbjct: 542 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 587

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           +IG G+FG V     +  G+ VA+K+++ +    E      + + +L++     +R V I
Sbjct: 43  RIGSGSFGTVYK--GKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRK-----TRHVNI 94
Query: 162 RNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
             +  Y  ++++ IV +   G SLY  L     + F +  + +I RQ  + + ++H   +
Sbjct: 95  LLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKNI 153
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           IH D+K  NI       +KI D+ +                 + +K    GS   E    
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGL-----------------ATVKSRWSGSQQVEQPTG 196
Query: 279 NYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
           + +     + APEVI       +S+  D++S G +L EL +GE  +    N + +  M
Sbjct: 197 SVL-----WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 56/290 (19%)
Query: 99  ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
            L+++G G FG V     +  G+  VAIK+++      E +M+E + +E  K   + S  
Sbjct: 12  FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSHE 63
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + VQ+      +  I I+ E M    L ++LR+  +R F    + E+ + + E + ++  
Sbjct: 64  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 122
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE- 274
            + +H DL   N L                           +     +KV DFG + Y  
Sbjct: 123 KQFLHRDLAARNCL---------------------------VNDQGVVKVSDFGLSRYVL 155
Query: 275 HQEHNYIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL----FQTHENL 327
             E+   V ++    +  PEV++   +S   D+W+ G ++ E+ S   +    F   E  
Sbjct: 156 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 215
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
           EH+A   R+  P   H+       +EK        W E A  R + K +L
Sbjct: 216 EHIAQGLRLYRP---HL------ASEKVYTIMYSCWHEKADERPTFKILL 256

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 12  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 69
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 70  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 117
Query: 208 -------ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
                  E + ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 118 NWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 163
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 164 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 211

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 61/250 (24%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R K+ + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+   P
Sbjct: 79  GHHLNVVNLLGACTKPGGPLMVITEFCKFGNL----------STYLRSKRNEFVPYKVAP 128
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
            DL ++            Q+ + + F+   + IH DL   NIL      +KI D+ +   
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
              D +  ++      +K                      + APE I    ++   D+WS
Sbjct: 189 IXKDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 226
Query: 307 VGCILIELCS 316
            G +L E+ S
Sbjct: 227 FGVLLWEIFS 236

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/220 (20%), Positives = 90/220 (40%), Gaps = 30/220 (13%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           +G+G FGQ +    RETGE + +K ++R  ++ +   + E+ V+           RC++ 
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVM-----------RCLEH 66
Query: 162 RNWFDY------RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
            N   +         +  + E +       + K+    +P        + +   +A++H 
Sbjct: 67  PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
           + +IH DL   N L    + + + D+ +            RL      +     S     
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLA-----------RLMVDEKTQPEGLRSLKKPD 175
Query: 276 QEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
           ++  Y +V   ++ APE+I G  +    D++S G +L E+
Sbjct: 176 RKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 46/230 (20%)
Query: 98  KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
           ++L K+G+G+FG V     D  +G+TV++    ++K  +   +++ + ++   R      
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 61
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
             V   +  D+RN I +   +L P            SL D LRK+    F +  +     
Sbjct: 62  --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+ E + ++   R IH DL   N+L  + + +KI D+ +           + LP++    
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL----------MRALPQNDDHX 168
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
           V+         QEH  +     + APE +    +S+  D W  G  L E+
Sbjct: 169 VM---------QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K  +      V  
Sbjct: 21  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHT 221
           R   +   +I I F   G +L D+LR+ N +     ++  +  Q+   + ++     IH 
Sbjct: 81  R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 222 DLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI 281
           DL   N L      +K+ D+ ++           RL           G T   H    + 
Sbjct: 137 DLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTXTAHAGAKFP 176
Query: 282 VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMME 334
           +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 177 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 233
Query: 335 RVLG 338
           R  G
Sbjct: 234 RPEG 237

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 51/252 (20%)
Query: 86  LFALGENLTSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYREAA 138
           +F   E   SR KI  LR++G+G+FG V      D +  E    VA+K V      RE  
Sbjct: 6   VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 139 --MTEIDVLELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR----- 187
             + E  V++        G  C   V++           +V E++    L  +LR     
Sbjct: 66  EFLNEASVMK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 188 --KNNYRPFP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
              N  RP P +  + ++  ++ + +A+++  + +H DL   N +      +KI D+ +T
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDM 304
                                 D   TAY  +    ++  R + APE +    ++   DM
Sbjct: 178 R---------------------DIYETAYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDM 215
Query: 305 WSVGCILIELCS 316
           WS G +L E+ S
Sbjct: 216 WSFGVVLWEITS 227

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 51/252 (20%)
Query: 86  LFALGENLTSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYREAA 138
           +F   E   SR KI  LR++G+G+FG V      D +  E    VA+K V      RE  
Sbjct: 6   VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 139 --MTEIDVLELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR----- 187
             + E  V++        G  C   V++           +V E++    L  +LR     
Sbjct: 66  EFLNEASVMK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 188 --KNNYRPFP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
              N  RP P +  + ++  ++ + +A+++  + +H DL   N +      +KI D+ +T
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDM 304
            R   + +YY++  K                     ++  R + APE +    ++   DM
Sbjct: 178 -RDIYETDYYRKGGKG--------------------LLPVR-WMAPESLKDGVFTTSSDM 215
Query: 305 WSVGCILIELCS 316
           WS G +L E+ S
Sbjct: 216 WSFGVVLWEITS 227

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K  +      V  
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHT 221
           R   +   +I I F   G +L D+LR+ N +     ++  +  Q+   + ++     IH 
Sbjct: 80  R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 222 DLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI 281
           DL   N L      +K+ D+ ++           RL           G T   H    + 
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKFP 175
Query: 282 VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMME 334
           +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 176 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 335 RVLG 338
           R  G
Sbjct: 233 RPEG 236

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K  +      V  
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHT 221
           R   +   +I I F   G +L D+LR+ N +     ++  +  Q+   + ++     IH 
Sbjct: 80  R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 222 DLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI 281
           DL   N L      +K+ D+ ++           RL           G T   H    + 
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKFP 175
Query: 282 VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMME 334
           +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 176 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 335 RVLG 338
           R  G
Sbjct: 233 RPEG 236

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
           +V EM  LGP L  +L++N  R      + E+  Q+   + ++ +   +H DL   N+L 
Sbjct: 82  LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 138
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
           V+  Y KI D+ ++     D NYYK                    Q H        + AP
Sbjct: 139 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 177
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
           E I    +S   D+WS G ++ E  S G+  ++  +  E  AM+E+
Sbjct: 178 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 223

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K  +      V  
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHT 221
           R   +   +I I F   G +L D+LR+ N +     ++  +  Q+   + ++     IH 
Sbjct: 85  R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 222 DLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI 281
           DL   N L      +K+ D+ ++           RL           G T   H    + 
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKFP 180
Query: 282 VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMME 334
           +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 181 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 335 RVLG 338
           R  G
Sbjct: 238 RPEG 241

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 18  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 75
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 76  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 169
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 170 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 21  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 78
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 79  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 126
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 127 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 172
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 173 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 220

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 61/250 (24%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R K+ + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+   P
Sbjct: 79  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKVAP 128
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
            DL ++            Q+ + + F+   + IH DL   NIL      +KI D+ +   
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
              D +  ++      +K                      + APE I    ++   D+WS
Sbjct: 189 IXKDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 226
Query: 307 VGCILIELCS 316
            G +L E+ S
Sbjct: 227 FGVLLWEIFS 236

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
           +V EM  LGP L  +L++N  R      + E+  Q+   + ++ +   +H DL   N+L 
Sbjct: 84  LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 140
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
           V+  Y KI D+ ++     D NYYK                    Q H        + AP
Sbjct: 141 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHG--KWPVKWYAP 179
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
           E I    +S   D+WS G ++ E  S G+  ++  +  E  AM+E+
Sbjct: 180 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
           +V EM  LGP L  +L++N  R      + E+  Q+   + ++ +   +H DL   N+L 
Sbjct: 88  LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 144
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
           V+  Y KI D+ ++     D NYYK                    Q H        + AP
Sbjct: 145 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 183
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
           E I    +S   D+WS G ++ E  S G+  ++  +  E  AM+E+
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 72
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 73  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGXLLDYVREHKDNIGSQYLL 120
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 166
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 167 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 18  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 75
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 76  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 169
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 170 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 25  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 82
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 83  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 130
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 131 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 176
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 177 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 224

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
           +V EM  LGP L  +L++N  R      + E+  Q+   + ++ +   +H DL   N+L 
Sbjct: 102 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 158
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
           V+  Y KI D+ ++     D NYYK                    Q H        + AP
Sbjct: 159 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 197
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
           E I    +S   D+WS G ++ E  S G+  ++  +  E  AM+E+
Sbjct: 198 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 243

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
           +V EM  LGP L  +L++N  R      + E+  Q+   + ++ +   +H DL   N+L 
Sbjct: 94  LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 150
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
           V+  Y KI D+ ++     D NYYK                    Q H        + AP
Sbjct: 151 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 189
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
           E I    +S   D+WS G ++ E  S G+  ++  +  E  AM+E+
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 235

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 40  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 97
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 98  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 145
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 146 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 191
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 192 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 239

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 18  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 75
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 76  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 169
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 170 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 74
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 75  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 168
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 169 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 59/247 (23%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R  + + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 28  RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL 198
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+  DL
Sbjct: 88  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYK-DL 136
Query: 199 VREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
            ++            Q+ + + F+   + IH DL   NIL      +KI D+ +      
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYK 196
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC 309
           D +Y ++      +K                      + APE I    ++   D+WS G 
Sbjct: 197 DPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGV 234
Query: 310 ILIELCS 316
           +L E+ S
Sbjct: 235 LLWEIFS 241

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 22  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 79
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 80  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 173
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 174 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 221

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 72
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 73  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 166
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 167 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 79
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTXTAHAGAKF 179
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 180 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 334 ERVLG 338
           ER  G
Sbjct: 237 ERPEG 241

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
           +V EM  LGP L  +L++N  R      + E+  Q+   + ++ +   +H DL   N+L 
Sbjct: 104 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 160
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
           V+  Y KI D+ ++     D NYYK                    Q H        + AP
Sbjct: 161 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 199
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
           E I    +S   D+WS G ++ E  S G+  ++  +  E  AM+E+
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
           +V EM  LGP L  +L++N  R      + E+  Q+   + ++ +   +H DL   N+L 
Sbjct: 104 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 160
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
           V+  Y KI D+ ++     D NYYK                    Q H        + AP
Sbjct: 161 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 199
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
           E I    +S   D+WS G ++ E  S G+  ++  +  E  AM+E+
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 79
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 179
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 180 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 334 ERVLG 338
           ER  G
Sbjct: 237 ERPEG 241

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 16  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 73
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    + +    PF   +D VRE    IG Q L 
Sbjct: 74  SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGXLLDYVREHKDNIGSQYLL 121
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 122 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 167
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 168 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 215

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 61/250 (24%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R K+ + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+   P
Sbjct: 88  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKVAP 137
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
            DL ++            Q+ + + F+   + IH DL   NIL      +KI D+ +   
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
              D +  ++      +K                      + APE I    ++   D+WS
Sbjct: 198 IXKDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 235
Query: 307 VGCILIELCS 316
            G +L E+ S
Sbjct: 236 FGVLLWEIFS 245

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 18  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 75
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    + +    PF   +D VRE    IG Q L 
Sbjct: 76  SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 123
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 169
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 170 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 18  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 69
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y  +  + IV +   G SLY  L  +  + F +  + +I RQ    + ++H   
Sbjct: 70  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKS 128
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +                 + +K    GS  +E   
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 171
Query: 278 HNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 172 GSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 225

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 97/245 (39%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 281
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            +L   N L      +K+ D+                     +  +  G T   H    +
Sbjct: 342 RNLAARNCLVGENHLVKVADF--------------------GLSRLMTGDTYTAHAGAKF 381
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 382 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 438
Query: 334 ERVLG 338
           ER  G
Sbjct: 439 ERPEG 443

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 48/286 (16%)
Query: 99  ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
            L+++G G FG V     +  G+  VAIK+++      E +M+E + +E  K   + S  
Sbjct: 13  FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSHE 64
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
           + VQ+      +  I I+ E M    L ++LR+  +R F    + E+ + + E + ++  
Sbjct: 65  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 123
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
            + +H DL   N L      +K+ D+ ++ R   D  Y     + S   V          
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTS--SRGSKFPV---------- 170
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL----FQTHENLEHLA 331
                      +  PEV++   +S   D+W+ G ++ E+ S   +    F   E  EH+A
Sbjct: 171 ----------RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
              R+  P   H+       +EK        W E A  R + K +L
Sbjct: 221 QGLRLYRP---HL------ASEKVYTIMYSCWHEKADERPTFKILL 257

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 72
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    + +    PF   +D VRE    IG Q L 
Sbjct: 73  SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 120
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 166
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 167 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 74
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    + +    PF   +D VRE    IG Q L 
Sbjct: 75  SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 122
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 168
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 169 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 19  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 76
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    + +    PF   +D VRE    IG Q L 
Sbjct: 77  SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 124
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 125 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 170
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 171 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 218

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 72
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 73  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 166
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 167 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 101/241 (41%), Gaps = 46/241 (19%)
Query: 98  KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
           K + ++G+G FG V  C    L   TG  VA+K ++ S    +     EI +L+ L    
Sbjct: 10  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREI--GRQLLE 208
               R V   ++   R  + +V E L PS  L DFL+++  R   +D  R +    Q+ +
Sbjct: 70  IVKYRGV---SYGPGRPELRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 122
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN-YYKRLPKSSAIKVID 267
            + ++   R +H DL   NIL  S  ++KI D+ +    P D +    R P  S I    
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI---- 178
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL-------CSGEAL 320
                              + APE +    +S   D+WS G +L EL       CS  A 
Sbjct: 179 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 220
Query: 321 F 321
           F
Sbjct: 221 F 221

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 9   TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 67  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 114
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 115 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 160
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 161 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 208

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 74
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 174
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 175 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 334 ERVLG 338
           ER  G
Sbjct: 232 ERPEG 236

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 97/245 (39%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 320
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            +L   N L      +K+ D+                     +  +  G T   H    +
Sbjct: 381 RNLAARNCLVGENHLVKVADF--------------------GLSRLMTGDTYTAHAGAKF 420
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 421 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 477
Query: 334 ERVLG 338
           ER  G
Sbjct: 478 ERPEG 482

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 16  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 73
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    + +    PF   +D VRE    IG Q L 
Sbjct: 74  SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 121
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 122 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 167
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 168 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 215

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
           S    +++IG G FG V        G  +    V +IK  +E +M+E D +E  +   + 
Sbjct: 27  SELTFVQEIGSGQFGLV------HLGYWLNKDKV-AIKTIKEGSMSEDDFIEEAEVMMKL 79
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
           S  + VQ+      +  IC+VFE +    L D+LR      F  + +  +   + E +A+
Sbjct: 80  SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 138
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           + +  +IH DL   N L    + +K+ D+ +T R   D  Y         +K        
Sbjct: 139 LEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVK-------- 189
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
                         + +PEV     +S   D+WS G ++ E+ S G+  ++   N E
Sbjct: 190 --------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 74
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 174
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 175 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 334 ERVLG 338
           ER  G
Sbjct: 232 ERPEG 236

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 24  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 78
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 79  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 178
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 179 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 235
Query: 334 ERVLG 338
           ER  G
Sbjct: 236 ERPEG 240

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 43/227 (18%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS---GSR 157
            K GEG FG V       T  TVA+K        + AAM +I   EL +++D+     ++
Sbjct: 28  NKXGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVXAK 77
Query: 158 C-----VQIRNWFDYRNHICIVFEML-GPSLYDFLR-KNNYRPFPVDLVREIGRQLLECV 210
           C     V++  +    + +C+V+      SL D L   +   P       +I +     +
Sbjct: 78  CQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGI 137
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            F+H+   IH D+K  NIL       KI D+ +   S     + + +  S          
Sbjct: 138 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE---KFAQXVXXSR--------- 185
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
                     IV T  Y APE + G   +   D++S G +L+E+ +G
Sbjct: 186 ----------IVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG 221

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 79
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 179
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 180 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 334 ERVLG 338
           ER  G
Sbjct: 237 ERPEG 241

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 79
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 179
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 180 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 334 ERVLG 338
           ER  G
Sbjct: 237 ERPEG 241

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 76
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 176
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 177 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
Query: 334 ERVLG 338
           ER  G
Sbjct: 234 ERPEG 238

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 74
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 75  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+                   
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG------------------ 164
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
              +    G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 165 ---RAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 76
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 176
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 177 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
Query: 334 ERVLG 338
           ER  G
Sbjct: 234 ERPEG 238

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 61/250 (24%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R K+ + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+   P
Sbjct: 88  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKVAP 137
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
            DL ++            Q+ + + F+   + IH DL   NIL      +KI D+ +   
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
              D +  ++      +K                      + APE I    ++   D+WS
Sbjct: 198 IYKDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 235
Query: 307 VGCILIELCS 316
            G +L E+ S
Sbjct: 236 FGVLLWEIFS 245

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 28/161 (17%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 22  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 79
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 80  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
             CV       ++ D RL+H DL   N+L  +P+++KI D+
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 168

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 28/161 (17%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 72
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 73  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
             CV       ++ D RL+H DL   N+L  +P+++KI D+
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 33  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 87
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 88  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 187
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 188 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 244
Query: 334 ERVLG 338
           ER  G
Sbjct: 245 ERPEG 249

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 59/247 (23%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R  + + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 28  RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL 198
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+  DL
Sbjct: 88  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYK-DL 136
Query: 199 VREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
            ++            Q+ + + F+   + IH DL   NIL      +KI D+ +      
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYK 196
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC 309
           D +Y ++      +K                      + APE I    ++   D+WS G 
Sbjct: 197 DPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGV 234
Query: 310 ILIELCS 316
           +L E+ S
Sbjct: 235 LLWEIFS 241

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 38/251 (15%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGET---VAIKVVRS--IKKYREAAMTEIDVLELLK 149
           S  KI + IG G FG+V     +  G+    VAIK ++S   +K R   ++E  ++    
Sbjct: 33  SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM---G 89
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
           ++D      + +         + I+ E M   SL  FLR+N+ +   + LV  + R +  
Sbjct: 90  QFDHP--NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML-RGIAA 146
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT---ARSPTDVNYYKRLPKSSAIKV 265
            + ++ D+  +H DL   NIL  S    K+ D+ ++       +D  Y   L     I+ 
Sbjct: 147 GMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR- 205
Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH 324
                                + APE I    ++   D+WS G ++ E+ S GE  +   
Sbjct: 206 ---------------------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 244
Query: 325 ENLEHLAMMER 335
            N + +  +E+
Sbjct: 245 TNQDVINAIEQ 255

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 74
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 174
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 175 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 334 ERVLG 338
           ER  G
Sbjct: 232 ERPEG 236

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 30  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 81
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y  +  + IV +   G SLY  L  +  + F +  + +I RQ    + ++H   
Sbjct: 82  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKS 140
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +     T+ + +              GS  +E   
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWS-------------GSHQFEQLS 183
Query: 278 HNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 184 GSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 74
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    + +    PF   +D VRE    IG Q L 
Sbjct: 75  SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 122
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+    R+             
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF---GRAKL----------- 168
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 169 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 98/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G FG+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 18  KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 72
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 73  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTXTAHAGAKF 172
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G    Q +E LE    M
Sbjct: 173 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM 229
Query: 334 ERVLG 338
           ER  G
Sbjct: 230 ERPEG 234

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 99/249 (39%), Gaps = 60/249 (24%)
Query: 96  RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
           R  + + +G G FGQV++     +D+  T  TVA+K+++    + E  A M+E+      
Sbjct: 29  RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 88
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF--PV 196
               +V+ LL    + G   + I  +  + N           S Y   ++N + P+  P 
Sbjct: 89  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKTPE 138
Query: 197 DLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS 247
           DL ++            Q+ + + F+   + IH DL   NIL      +KI D+ +    
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSV 307
             D +  ++      +K                      + APE I    ++   D+WS 
Sbjct: 199 XKDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSF 236
Query: 308 GCILIELCS 316
           G +L E+ S
Sbjct: 237 GVLLWEIFS 245

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 74
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 174
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 175 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 334 ERVLG 338
           ER  G
Sbjct: 232 ERPEG 236

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 74
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    + +    PF   +D VRE    IG Q L 
Sbjct: 75  SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 122
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
             CV       ++ D RL+H DL   N+L  +P+++KI D+
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 30  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 81
Query: 161 IRNWFDYRN--HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y     + IV +   G SLY  L  +  + F +  + +I RQ    + ++H   
Sbjct: 82  ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKS 140
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +     T+ + +              GS  +E   
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWS-------------GSHQFEQLS 183
Query: 278 HNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 184 GSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 51/244 (20%)
Query: 94  TSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYRE--AAMTEIDV 144
            SR KI  LR++G+G+FG V      D +  E    VA+K V      RE    + E  V
Sbjct: 15  VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 74
Query: 145 LELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR-------KNNYRP 193
           ++        G  C   V++           +V E++    L  +LR        N  RP
Sbjct: 75  MK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 194 FP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
            P +  + ++  ++ + +A+++  + +H +L   N +      +KI D+ +T R   + +
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT-RDIYETD 185
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
           YY++  K                     ++  R + APE +    ++   DMWS G +L 
Sbjct: 186 YYRKGGKG--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLW 224
Query: 313 ELCS 316
           E+ S
Sbjct: 225 EITS 228

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 19  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 76
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    + +    PF   +D VRE    IG Q L 
Sbjct: 77  SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 124
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
             CV       ++ D RL+H DL   N+L  +P+++KI D+
Sbjct: 125 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 165

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 51/244 (20%)
Query: 94  TSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYRE--AAMTEIDV 144
            SR KI  LR++G+G+FG V      D +  E    VA+K V      RE    + E  V
Sbjct: 14  VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 145 LELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR-------KNNYRP 193
           ++        G  C   V++           +V E++    L  +LR        N  RP
Sbjct: 74  MK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 194 FP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
            P +  + ++  ++ + +A+++  + +H +L   N +      +KI D+ +T R   + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT-RDIYETD 184
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
           YY++  K                     ++  R + APE +    ++   DMWS G +L 
Sbjct: 185 YYRKGGKG--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 313 ELCS 316
           E+ S
Sbjct: 224 EITS 227

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 72/360 (20%), Positives = 134/360 (37%), Gaps = 102/360 (28%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDV---------- 144
           ++Y +  +IG+G++G V    +       A+KV+   K  R+A                 
Sbjct: 13  NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 145 --------------LELLKRYDRSGSRCVQIRNWFDYRN--HICIVFEML--GPSLYDFL 186
                         + +LK+ D      V++    D  N  H+ +VFE++  GP     +
Sbjct: 73  CIQPRGPIEQVYQEIAILKKLDHP--NVVKLVEVLDDPNEDHLYMVFELVNQGP----VM 126
Query: 187 RKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
                +P   D  R   + L++ + ++H  ++IH D+KP N+L     ++KI D+ V+  
Sbjct: 127 EVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS-- 184
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
                N +K    S A+     G+ A+   E   +  TR   + + +         D+W+
Sbjct: 185 -----NEFK---GSDALLSNTVGTPAFMAPES--LSETRKIFSGKAL---------DVWA 225
Query: 307 VGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEG 366
           +G  L     G+  F          M ER++                  ++   L++P+ 
Sbjct: 226 MGVTLYCFVFGQCPF----------MDERIMC-------------LHSKIKSQALEFPDQ 262
Query: 367 ATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
               E +K                        DL+  +L  +P SR+   +   HP+ TR
Sbjct: 263 PDIAEDLK------------------------DLITRMLDKNPESRIVVPEIKLHPWVTR 298

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 100/244 (40%), Gaps = 34/244 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K  +      V  
Sbjct: 18  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHT 221
           R   +   +I I F   G +L D+LR+ N +     ++  +  Q+   + ++     IH 
Sbjct: 78  R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 222 DLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI 281
           DL   N L      +K+ D+ ++           RL           G T   H    + 
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTXTAHAGAKFP 173
Query: 282 VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMME 334
           +    + APE +    +S   D+W+ G +L E+ +       G    Q +E LE    ME
Sbjct: 174 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 335 RVLG 338
           R  G
Sbjct: 231 RPEG 234

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 34/237 (14%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
           S    +++IG G FG V        G  +    V +IK  RE AM+E D +E  +   + 
Sbjct: 8   SELTFVQEIGSGQFGLV------HLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEVMMKL 60
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
           S  + VQ+      +  IC+V E +    L D+LR      F  + +  +   + E +A+
Sbjct: 61  SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 119
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           + +  +IH DL   N L    + +K+ D+ +T R   D  Y         +K        
Sbjct: 120 LEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVK-------- 170
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
                         + +PEV     +S   D+WS G ++ E+ S G+  ++   N E
Sbjct: 171 --------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 21  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 75
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 76  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++ R  T   Y         IK                
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIK---------------- 178
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
                 + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 179 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 232
Query: 334 ERVLG 338
           ER  G
Sbjct: 233 ERPEG 237

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 76
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++ R  T   Y         IK                
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIK---------------- 179
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
                 + APE +    +S   D+W+ G +L E+ +       G  L Q +E LE    M
Sbjct: 180 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
Query: 334 ERVLG 338
           ER  G
Sbjct: 234 ERPEG 238

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/237 (21%), Positives = 93/237 (39%), Gaps = 48/237 (20%)
Query: 101 RKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIKKY--REAAMTEIDVLELLKRYDR 153
           + +G G FG+V++      G+      VA+K+++S      +EA M+E+ ++  L +++ 
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGR-------- 204
                V +     +   + ++ E      L +FLR+ + R    D    I          
Sbjct: 112 ----IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLETDPAFAIANSTASTRDL 166
Query: 205 -----QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
                Q+ + +AF+     IH D+   N+L  +    KI D+ +      D NY  +   
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
              +K                      + APE I    ++   D+WS G +L E+ S
Sbjct: 227 RLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/237 (21%), Positives = 93/237 (39%), Gaps = 48/237 (20%)
Query: 101 RKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIKKY--REAAMTEIDVLELLKRYDR 153
           + +G G FG+V++      G+      VA+K+++S      +EA M+E+ ++  L +++ 
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGR-------- 204
                V +     +   + ++ E      L +FLR+ + R    D    I          
Sbjct: 112 ----IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLETDPAFAIANSTLSTRDL 166
Query: 205 -----QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
                Q+ + +AF+     IH D+   N+L  +    KI D+ +      D NY  +   
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
              +K                      + APE I    ++   D+WS G +L E+ S
Sbjct: 227 RLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 42  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 93
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y  +  + IV +   G SLY  L     +   + L+ +I RQ  + + ++H   
Sbjct: 94  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 152
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +                 + +K    GS  +E   
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 195
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 196 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 41  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 92
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y  +  + IV +   G SLY  L     +   + L+ +I RQ  + + ++H   
Sbjct: 93  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 151
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +                 + +K    GS  +E   
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 194
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 195 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 248

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +G G FG V   L    GE V I V  +I + REA   + +   L + Y  +
Sbjct: 49  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIMELREATSPKANKEILDEAYVMA 106
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLLE 208
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 107 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 154
Query: 209 --CVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 155 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 200
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 201 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 248

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +  G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 15  TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 72
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 73  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 166
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 167 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +  G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 22  TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 79
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    +      PF   +D VRE    IG Q L 
Sbjct: 80  SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 173
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 174 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 221

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 19  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 70
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y  +  + IV +   G SLY  L     +   + L+ +I RQ  + + ++H   
Sbjct: 71  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 129
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +                 + +K    GS  +E   
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 172
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 173 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 19  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 70
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y  +  + IV +   G SLY  L     +   + L+ +I RQ  + + ++H   
Sbjct: 71  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 129
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +                 + +K    GS  +E   
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 172
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 173 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
           +V EM  LGP L  +L++N  R      + E+  Q+   + ++ +   +H DL   N+L 
Sbjct: 88  LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 144
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
           V+  Y KI D+ ++     D N YK                    Q H        + AP
Sbjct: 145 VTQHYAKISDFGLSKALRADENXYKA-------------------QTHGKW--PVKWYAP 183
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
           E I    +S   D+WS G ++ E  S G+  ++  +  E  AM+E+
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 16  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 67
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y  +  + IV +   G SLY  L     +   + L+ +I RQ  + + ++H   
Sbjct: 68  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 126
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +                 + +K    GS  +E   
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 169
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 170 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 223

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           + +K ++ +  G FG V   L    GE V I V  +IK+ REA   + +   L + Y  +
Sbjct: 22  TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 79
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
                          H+C +  +   S    + +    PF   +D VRE    IG Q L 
Sbjct: 80  SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 127
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
             CV       ++ D RL+H DL   N+L  +P+++KI D+ +                 
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 173
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                   G+   E+      V  + + A E IL   +++  D+WS G  + EL +
Sbjct: 174 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 221

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 102/254 (40%), Gaps = 46/254 (18%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELL 148
            S  KI + IG G FG+V     +  G+    VAIK +++    K R   ++E  ++   
Sbjct: 28  ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM--- 84
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
            ++D      + +         + I+ E M   SL  FLRKN+ R   + LV  + R + 
Sbjct: 85  GQFDHP--NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGIG 141
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++ D+  +H DL   NIL  S                           +   KV D
Sbjct: 142 SGMKYLSDMSAVHRDLAARNILVNS---------------------------NLVCKVSD 174
Query: 268 FGSTAYEHQEHNYIVSTR------HYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL 320
           FG +     +     +TR       + APE I    ++   D+WS G ++ E+ S GE  
Sbjct: 175 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
Query: 321 FQTHENLEHLAMME 334
           +    N + +  +E
Sbjct: 235 YWDMSNQDVIKAIE 248

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 51/252 (20%)
Query: 86  LFALGENLTSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYREAA 138
           +F   E   SR KI  LR++G+G+FG V      D +  E    VA+K V      RE  
Sbjct: 3   VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 139 --MTEIDVLELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR----- 187
             + E  V++        G  C   V++           +V E++    L  +LR     
Sbjct: 63  EFLNEASVMK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 114
Query: 188 --KNNYRPFP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
              N  RP P +  + ++  ++ + +A+++  + +H DL   N +      +KI D+ +T
Sbjct: 115 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 174
Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDM 304
                                 D   T    +    ++  R + APE +    ++   DM
Sbjct: 175 R---------------------DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDM 212
Query: 305 WSVGCILIELCS 316
           WS G +L E+ S
Sbjct: 213 WSFGVVLWEITS 224

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 51/252 (20%)
Query: 86  LFALGENLTSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYREAA 138
           +F   E   SR KI  LR++G+G+FG V      D +  E    VA+K V      RE  
Sbjct: 6   VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 139 --MTEIDVLELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR----- 187
             + E  V++        G  C   V++           +V E++    L  +LR     
Sbjct: 66  EFLNEASVMK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 188 --KNNYRPFP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
              N  RP P +  + ++  ++ + +A+++  + +H DL   N +      +KI D+ +T
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDM 304
                                 D   T    +    ++  R + APE +    ++   DM
Sbjct: 178 R---------------------DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDM 215
Query: 305 WSVGCILIELCS 316
           WS G +L E+ S
Sbjct: 216 WSFGVVLWEITS 227

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 14  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 65
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y  +  + IV +   G SLY  L     +   + L+ +I RQ  + + ++H   
Sbjct: 66  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 124
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +                 + +K    GS  +E   
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 167
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 168 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           ++H DLKP N+     + +K+ D+ +      D ++ K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF-------------------- 176
Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
               V T +Y +PE +  + ++   D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 42  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 93
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y  +  + IV +   G SLY  L     +   + L+ +I RQ  + + ++H   
Sbjct: 94  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 152
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +     T+ + +              GS  +E   
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWS-------------GSHQFEQLS 195
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 196 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           ++H DLKP N+     + +K+ D+ +      D ++ K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF-------------------- 176
Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
               V T +Y +PE +  + ++   D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 14  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 65
Query: 161 IRNWFDYRN--HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y     + IV +   G SLY  L     +   + L+ +I RQ  + + ++H   
Sbjct: 66  ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 124
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +                 + +K    GS  +E   
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 167
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 168 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELL 148
            S  KI + IG G FG+V     +  G+    VAIK +++    K R   ++E  ++   
Sbjct: 7   ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM--- 63
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
            ++D      + +         + I+ E M   SL  FLRKN+ R   + LV  + R + 
Sbjct: 64  GQFDHP--NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGIG 120
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++ D+  +H DL   NIL  S    K+ D+ ++     D       P++       
Sbjct: 121 SGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD-------PEA------- 166
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHEN 326
               AY  +     +    + APE I    ++   D+WS G ++ E+ S GE  +    N
Sbjct: 167 ----AYTTRGGKIPI---RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
Query: 327 LEHLAMME 334
            + +  +E
Sbjct: 220 QDVIKAIE 227

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 30/236 (12%)
Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRET--GETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
           L  +Y +   +GEG++G+V + LD ET     V I   + +++           ++LL+R
Sbjct: 3   LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR 62
Query: 151 YDRSGSRCVQIRN--WFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                   +Q+ +  + + +  + +V E     + + L     + FPV        QL++
Sbjct: 63  LRHK--NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLID 120
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H   ++H D+KP N+L  +   LKI    V                + A+     
Sbjct: 121 GLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGV----------------AEALHPFAA 164
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGW--SYPCDMWSVGCILIELCSGEALFQ 322
             T    Q       +  ++ PE+  GL     +  D+WS G  L  + +G   F+
Sbjct: 165 DDTCRTSQ------GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 48/238 (20%)
Query: 101 RKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIKKY--REAAMTEIDVLELLKRYDR 153
           + +G G FG+V++      G+      VA+K+++S      +EA M+E+ ++  L +++ 
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKN-------NYRPF--PVDLVRE-- 201
                V +     +   + ++ E      L +FLR+        +Y P   P + +    
Sbjct: 112 ----IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 202 ---IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
                 Q+ + +AF+     IH D+   N+L  +    KI D+ +      D NY  +  
Sbjct: 168 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 259 KSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
               +K                      + APE I    ++   D+WS G +L E+ S
Sbjct: 228 ARLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263

>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2 Length = 345

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 32/200 (16%)
Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           +++ + +KIG G FG +         E  A  VV+   +Y+E       +   LK Y R 
Sbjct: 37  NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKV--EYQENG----PLFSELKFYQRV 90
Query: 155 GSR-CVQI---RNWFDY----------------RNHICIVFEMLGPSLYDFLRKNNYRPF 194
             + C++    R   DY                R++  +V E LG  L     +N    F
Sbjct: 91  AKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TF 148
Query: 195 PVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL--FVSPEYLKIPDYKVTARSPTDVN 252
               V ++G ++L+ + ++H+   +H D+K  N+L  + +P+ + + DY ++ R   + N
Sbjct: 149 KKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGN 208
Query: 253 Y--YKRLPKSSAIKVIDFGS 270
           +  Y+  P+      I+F S
Sbjct: 209 HKQYQENPRKGHNGTIEFTS 228

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           ++H DLKP N+     + +K+ D+ +      D ++ K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF-------------------- 176
Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
               V T +Y +PE +  + ++   D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 98/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 18  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 72
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      I+ E M   +L D+LR+ N +     ++  +  Q+   + ++     IH
Sbjct: 73  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTFTAHAGAKF 172
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G    Q +E LE    M
Sbjct: 173 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM 229
Query: 334 ERVLG 338
           ER  G
Sbjct: 230 ERPEG 234

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 102/254 (40%), Gaps = 46/254 (18%)
Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELL 148
            S  KI + IG G FG+V     +  G+    VAIK +++    K R   ++E  ++   
Sbjct: 13  ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM--- 69
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
            ++D      + +         + I+ E M   SL  FLRKN+ R   + LV  + R + 
Sbjct: 70  GQFDHP--NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGIG 126
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++ D+  +H DL   NIL  S                           +   KV D
Sbjct: 127 SGMKYLSDMSYVHRDLAARNILVNS---------------------------NLVCKVSD 159
Query: 268 FGSTAYEHQEHNYIVSTR------HYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL 320
           FG +     +     +TR       + APE I    ++   D+WS G ++ E+ S GE  
Sbjct: 160 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
Query: 321 FQTHENLEHLAMME 334
           +    N + +  +E
Sbjct: 220 YWDMSNQDVIKAIE 233

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 40/243 (16%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           ++G G FG V   + R   + + +  ++ +K+  E A TE    E++    R      Q+
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDV-AIKVLKQGTEKADTE----EMM----REAQIMHQL 67
Query: 162 RNWFDYR-------NHICIVFEMLGPS-LYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
            N +  R         + +V EM G   L+ FL        PV  V E+  Q+   + ++
Sbjct: 68  DNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYL 126
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
            +   +H DL   N+L V+  Y KI D+ ++     D +YY      SA K         
Sbjct: 127 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT---ARSAGK--------- 174
Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAM 332
                        + APE I    +S   D+WS G  + E  S G+  ++  +  E +A 
Sbjct: 175 ---------WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 225
Query: 333 MER 335
           +E+
Sbjct: 226 IEQ 228

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 26/219 (11%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCV 159
           + ++G G +G V       +G+  A+K +R+    +E      D+    +  D   +  V
Sbjct: 39  IXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFT--V 96
Query: 160 QIRNWFDYRNHICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHD-L 216
                      + I  E+   SL  F ++  +  +  P D++ +I   +++ +  +H  L
Sbjct: 97  TFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
            +IH D+KP N+L  +   +K  D+ ++     DV            K ID G   Y   
Sbjct: 157 SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVA-----------KDIDAGCKPYXAP 205
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
           E          R    +   G+S   D+WS+G   IEL 
Sbjct: 206 E----------RINPELNQKGYSVKSDIWSLGITXIELA 234

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 34  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 85
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y  +  + IV +   G SLY  L     +   + L+ +I RQ  + + ++H   
Sbjct: 86  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 144
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +     T+ + +              GS  +E   
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWS-------------GSHQFEQLS 187
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 188 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 241

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 36/249 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           K+G G +G+V   + ++   TVA+K ++      E  + E  V++ +K         VQ+
Sbjct: 39  KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 93
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
                      IV E M   +L D+LR+ N       ++  +  Q+   + ++     IH
Sbjct: 94  LGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
            DL   N L      +K+ D+ ++           RL           G T   H    +
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 193
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
            +    + APE +    +S   D+W+ G +L E+ +       G  L Q ++ LE    M
Sbjct: 194 PIK---WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRM 250
Query: 334 ERVLGPIPQ 342
           E+  G  P+
Sbjct: 251 EQPEGCPPK 259

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 51/244 (20%)
Query: 94  TSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYREAA--MTEIDV 144
            SR KI  LR++G+G+FG V      D +  E    VA+K V      RE    + E  V
Sbjct: 14  VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 145 LELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR-------KNNYRP 193
           ++        G  C   V++           +V E++    L  +LR        N  RP
Sbjct: 74  MK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 194 FP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
            P +  + ++  ++ + +A+++  + +H DL   N +      +KI D+ +T        
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR------- 178
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
                         D   T    +    ++  R + APE +    ++   DMWS G +L 
Sbjct: 179 --------------DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 313 ELCS 316
           E+ S
Sbjct: 224 EITS 227

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/242 (20%), Positives = 105/242 (43%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
           + +GEG FGQV+      +D++  +   TVA+K+++  + +K     ++E+++++++ ++
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
               +    C Q     D   ++ + +   G +L ++LR    RP  ++   +I R    
Sbjct: 101 KNIINLLGACTQ-----DGPLYVIVAYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 152
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
                       QL   + ++   + IH DL   N+L      +KI D+ + AR   +++
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNID 211
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
           YYK+                              + APE +    +++  D+WS G ++ 
Sbjct: 212 YYKKTTNGRL---------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 313 EL 314
           E+
Sbjct: 251 EI 252

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           ++IG G+FG V             + V     +  +A   E+ VL          +R V 
Sbjct: 14  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 65
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
           I  +  Y  +  + IV +   G SLY  L     +   + L+ +I RQ  + + ++H   
Sbjct: 66  ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 124
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
           +IH DLK  NI       +KI D+ +     T+ + +              GS  +E   
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWS-------------GSHQFEQLS 167
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
            + +     + APEVI       +S+  D+++ G +L EL +G+  +    N + +  M
Sbjct: 168 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 50/246 (20%)
Query: 95  SRYKILRKIGEGTFGQVLDC-----LDRETGETVAIKVVRSIKKY--REAAMTEIDVLEL 147
           +R    + +G G FG+V++      +  +   TVA+K+++       REA M+E+ VL  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNN-----YRPFPVDLVR- 200
           L  +       V +           ++ E      L +FLR+        +  P  +   
Sbjct: 83  LGNH----MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 201 ----------EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
                         Q+ + +AF+     IH DL   NIL       KI D+ +      D
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
            NY  +      +K                      + APE I    +++  D+WS G  
Sbjct: 199 SNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIF 236
Query: 311 LIELCS 316
           L EL S
Sbjct: 237 LWELFS 242

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 50/246 (20%)
Query: 95  SRYKILRKIGEGTFGQVLDC-----LDRETGETVAIKVVRSIKKY--REAAMTEIDVLEL 147
           +R    + +G G FG+V++      +  +   TVA+K+++       REA M+E+ VL  
Sbjct: 46  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNN-----YRPFPVDLVR- 200
           L  +       V +           ++ E      L +FLR+        +  P  +   
Sbjct: 106 LGNH----MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 201 ----------EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
                         Q+ + +AF+     IH DL   NIL       KI D+ +      D
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKND 221
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
            NY  +      +K                      + APE I    +++  D+WS G  
Sbjct: 222 SNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIF 259
Query: 311 LIELCS 316
           L EL S
Sbjct: 260 LWELFS 265

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 50/246 (20%)
Query: 95  SRYKILRKIGEGTFGQVLDC-----LDRETGETVAIKVVRSIKKY--REAAMTEIDVLEL 147
           +R    + +G G FG+V++      +  +   TVA+K+++       REA M+E+ VL  
Sbjct: 39  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNN-----YRPFPVDLVR- 200
           L  +       V +           ++ E      L +FLR+        +  P  +   
Sbjct: 99  LGNH----MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 154
Query: 201 ----------EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
                         Q+ + +AF+     IH DL   NIL       KI D+ +      D
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
            NY  +      +K                      + APE I    +++  D+WS G  
Sbjct: 215 SNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIF 252
Query: 311 LIELCS 316
           L EL S
Sbjct: 253 LWELFS 258

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 50/246 (20%)
Query: 95  SRYKILRKIGEGTFGQVLDC-----LDRETGETVAIKVVRSIKKY--REAAMTEIDVLEL 147
           +R    + +G G FG+V++      +  +   TVA+K+++       REA M+E+ VL  
Sbjct: 46  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNN-----YRPFPVDLVR- 200
           L  +       V +           ++ E      L +FLR+        +  P  +   
Sbjct: 106 LGNH----MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 201 ----------EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
                         Q+ + +AF+     IH DL   NIL       KI D+ +      D
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
            NY  +      +K                      + APE I    +++  D+WS G  
Sbjct: 222 SNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIF 259
Query: 311 LIELCS 316
           L EL S
Sbjct: 260 LWELFS 265

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 50/246 (20%)
Query: 95  SRYKILRKIGEGTFGQVLDC-----LDRETGETVAIKVVRSIKKY--REAAMTEIDVLEL 147
           +R    + +G G FG+V++      +  +   TVA+K+++       REA M+E+ VL  
Sbjct: 41  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNN-----YRPFPVDLVR- 200
           L  +       V +           ++ E      L +FLR+        +  P  +   
Sbjct: 101 LGNH----MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 156
Query: 201 ----------EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
                         Q+ + +AF+     IH DL   NIL       KI D+ +      D
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 216
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
            NY  +      +K                      + APE I    +++  D+WS G  
Sbjct: 217 SNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIF 254
Query: 311 LIELCS 316
           L EL S
Sbjct: 255 LWELFS 260

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 96/244 (39%), Gaps = 33/244 (13%)
Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           R ++ R IGEG FG V   +            +++ K     ++ E  + E L       
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVA 211
              V++       N + I+ E+  LG  L  FL+    R F +DL   I    QL   +A
Sbjct: 451 PHIVKLIGVIT-ENPVWIIMELCTLG-ELRSFLQ---VRKFSLDLASLILYAYQLSTALA 505
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++   R +H D+   N+L  S + +K+ D+ ++ R   D  YYK       IK       
Sbjct: 506 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIK------- 557
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHL 330
                          + APE I    ++   D+W  G  + E L  G   FQ  +N + +
Sbjct: 558 ---------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
Query: 331 AMME 334
             +E
Sbjct: 603 GRIE 606

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 28/173 (16%)
Query: 193 PFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
           P  V +VR+IG  L    A        H D+KPENIL  + ++  + D+ + A + TD  
Sbjct: 134 PRAVAIVRQIGSALDAAHAAGA----THRDVKPENILVSADDFAYLVDFGI-ASATTDE- 187
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
                      K+   G+T          V T +Y APE       +Y  D++++ C+L 
Sbjct: 188 -----------KLTQLGNT----------VGTLYYXAPERFSESHATYRADIYALTCVLY 226
Query: 313 ELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE 365
           E  +G   +Q  +     A + + + P P  +   +    +  + RG    PE
Sbjct: 227 ECLTGSPPYQGDQLSVXGAHINQAI-PRPSTVRPGIPVAFDAVIARGXAKNPE 278

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 49/242 (20%), Positives = 105/242 (43%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
           + +GEG FGQV+      +D++  +   TVA+K+++  + +K     ++E+++++++ ++
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
               +    C Q     D   ++ + +   G +L ++LR    RP  ++   +I R    
Sbjct: 101 KNIITLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 152
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
                       QL   + ++   + IH DL   N+L      +KI D+ + AR   +++
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNID 211
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
           YYK+                              + APE +    +++  D+WS G ++ 
Sbjct: 212 YYKKTTNGRL---------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 313 EL 314
           E+
Sbjct: 251 EI 252

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	432
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	0.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	0.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-180
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-155
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-150
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-141
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-115
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-58
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-58
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-56
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-56
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-54
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-54
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	6e-54
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	6e-54
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-53
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-53
3o0g_A	292	Cell division protein kinase 5; kinase activator c	5e-53
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-52
3niz_A	311	Rhodanese family protein; structural genomics, str	7e-52
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	8e-52
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-51
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-50
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	4e-50
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-50
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-49
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-49
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-48
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-48
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-48
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	9e-48
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-47
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-47
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	6e-47
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	8e-47
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	8e-47
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	9e-47
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-46
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-46
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-46
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-46
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	8e-46
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-45
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-45
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-45
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-45
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-45
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	8e-45
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-44
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-44
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-44
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-44
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-44
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	9e-44
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-43
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-43
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-43
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-43
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	5e-43
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	6e-43
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-43
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	7e-43
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-42
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-42
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-42
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-42
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-42
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-42
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-42
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-42
3rp9_A	458	Mitogen-activated protein kinase; structural genom	5e-42
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-41
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-41
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-41
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	8e-41
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-40
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-40
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	7e-40
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	8e-40
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	8e-40
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-39
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-39
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-39
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-39
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-39
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-39
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-39
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	8e-39
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-38
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	8e-38
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-37
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-37
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-37
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-37
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-36
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	7e-36
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-35
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	5e-35
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	9e-35
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-34
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	9e-34
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-33
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-33
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	6e-31
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-30
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-29
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-29
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	6e-29
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	8e-29
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	9e-29
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-28
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-28
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-28
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-28
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-28
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	6e-28
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-28
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-28
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-27
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-27
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-27
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-27
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	5e-27
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	8e-27
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-25
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	7e-25
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-24
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-24
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-24
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-24
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-24
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	5e-24
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	3e-23
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	4e-23
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-23
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-23
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	9e-23
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	4e-22
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	8e-22
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-21
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	7e-21
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-20
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-20
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-20
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-20
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	5e-20
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	1e-19
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-19
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-19
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	6e-19
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-18
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	5e-18
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-18
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-18
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	7e-18
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	7e-18
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	9e-18
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-17
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-17
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-17
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-17
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-16
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-16
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	5e-16
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-16
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	6e-16
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-15
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-15
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-15
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-15
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-15
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	6e-15
3soc_A	322	Activin receptor type-2A; structural genomics cons	9e-15
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-14
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-14
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-14
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-13
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-13
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-13
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	4e-13
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-13
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	7e-13
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-12
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-12
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-12
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	5e-12
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	9e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-11
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-11
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	9e-11
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	9e-11
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-10
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-10
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	5e-10
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-10
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	6e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	7e-10
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	7e-10
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	9e-10
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-09
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-09
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-09
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	6e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-09
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	8e-09
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-09
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-08
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-08
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-07
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-07
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-07
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-06
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-06
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-06
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	4e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-06
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	8e-06
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	9e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-05
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	6e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-05
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	8e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-04
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-04
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	8e-04

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  531 bits (1371), Expect = 0.0
 Identities = 135/359 (37%), Positives = 207/359 (57%), Gaps = 11/359 (3%)

Query: 69  AQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV 128
           +      ++ DD+  H+ +  G  L + + ++RK+G+GTFG+VL C   +  +  A+KVV
Sbjct: 9   SGRENLYFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV 68

Query: 129 RSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRK 188
           R+IKKY  +A  E D+L+ ++  D + +  V+    F Y +H+C++FE LGPSLY+ + +
Sbjct: 69  RNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITR 128

Query: 189 NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP 248
           NNY  F ++ ++    ++L+ + ++  + L HTDLKPENIL   P + K           
Sbjct: 129 NNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188

Query: 249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVG 308
             +       KS+ IK+IDFG   ++   H  I++TR YRAPEVIL LGW    DMWS G
Sbjct: 189 KKIQI--YRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFG 246

Query: 309 CILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDK-PAEKFVRRG--RLDWPE 365
           C+L EL +G  LF+THE++EHLAMME ++ PIP++ML    K    K+V +   +L WPE
Sbjct: 247 CVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPE 306

Query: 366 GATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            A+S  SIK V K   L  ++   +        D L  +L+ DP+ R +  + LKH F 
Sbjct: 307 NASSINSIKHVKKCLPLYKIIKHEL------FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  514 bits (1326), Expect = 0.0
 Identities = 158/346 (45%), Positives = 230/346 (66%), Gaps = 15/346 (4%)

Query: 83  GHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETG-ETVAIKVVRSIKKYREAAMTE 141
            H +   G+ L++RY+I+  +GEG FG+V++C+D + G   VA+K+V+++ +Y EAA +E
Sbjct: 2   MHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSE 61

Query: 142 IDVLELLKRYDRSG-SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVR 200
           I VLE L   D +   RCVQ+  WF++  HICIVFE+LG S YDF+++N + PF +D +R
Sbjct: 62  IQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR 121

Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
           ++  Q+ + V F+H  +L HTDLKPENILFV  +Y +  + K+           +R   +
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD--------ERTLIN 173

Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
             IKV+DFGS  Y+ + H+ +VSTRHYRAPEVIL LGWS PCD+WS+GCILIE   G  +
Sbjct: 174 PDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
           F TH++ EHLAMMER+LGP+P+HM+++  K   K+    RLDW E +++   +    K P
Sbjct: 234 FPTHDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACK-P 290

Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
             + ++ Q V+H    L DL+Q +L YDP+ R+T  +ALKHPFF  
Sbjct: 291 LKEFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFFDL 334

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  504 bits (1301), Expect = e-180
 Identities = 154/350 (44%), Positives = 231/350 (66%), Gaps = 15/350 (4%)

Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETG-ETVAIKVVRSIKKYREA 137
           DDK+GH +  +G+ L  RY+I+  +GEGTFG+V++CLD   G   VA+K++R++ KYREA
Sbjct: 3   DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62

Query: 138 AMTEIDVLELLKRYDRSG-SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
           A  EI+VL+ +K  D+     CV + +WF++  H+CI FE+LG + ++FL++NN++P+P+
Sbjct: 63  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122

Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
             VR +  QL   + F+H+ +L HTDLKPENILFV+ E+  + +           +  ++
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHK--------SCEEK 174

Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
             K+++I+V DFGS  ++H+ H  IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E   
Sbjct: 175 SVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234

Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G  LFQTHEN EHL MME++LGPIP HM+ R  K  +K+  +G L W E ++    +K  
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKEN 292

Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
            K P    ++   ++H    L DL++ +L +DP+ R+T  +AL HPFF  
Sbjct: 293 CK-PLKSYMLQDSLEHVQ--LFDLMRRMLEFDPAQRITLAEALLHPFFAG 339

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  445 bits (1147), Expect = e-155
 Identities = 118/363 (32%), Positives = 180/363 (49%), Gaps = 36/363 (9%)

Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA 138
           DD  G Y+    +++  RY++L+ IG+G+FGQV+   D +  + VA+K+VR+ K++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140

Query: 139 MTEIDVLELLKRYDRSG-SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
             EI +LE L++ D+      + +   F +RNHIC+ FE+L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200

Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
           LVR+    +L+C+  +H  R+IH DLKPENIL                            
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236

Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
              S IKVIDFGS+ YEHQ     + +R YRAPEVILG  +  P DMWS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295

Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGAT--------- 368
             L    +  + LA M  +LG   Q +L    +       +G   +    T         
Sbjct: 296 YPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLN 355

Query: 369 -SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
             R     +   P  +              +D L+  L +DP+ R+T   AL+HP+  R 
Sbjct: 356 GGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR 415

Query: 428 YYR 430
             +
Sbjct: 416 LPK 418

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  429 bits (1106), Expect = e-150
 Identities = 120/366 (32%), Positives = 184/366 (50%), Gaps = 43/366 (11%)

Query: 79  DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA 138
           DD +  Y+   GE    RY+I   IG+G+FGQV+   DR   E VAIK++++ K +   A
Sbjct: 38  DDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA 97

Query: 139 MTEIDVLELLKRYDRSG-SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
             E+ +LEL+ ++D       V ++  F +RNH+C+VFEML  +LYD LR  N+R   ++
Sbjct: 98  QIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLN 157

Query: 198 LVREIGRQLLECVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
           L R+  +Q+   + F+   +L +IH DLKPENIL  +P                      
Sbjct: 158 LTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNP---------------------- 195

Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
              K SAIK++DFGS+    Q     + +R YR+PEV+LG+ +    DMWS+GCIL+E+ 
Sbjct: 196 ---KRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMH 252

Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA 375
           +GE LF     ++ +  +  VLG  P H+L +  K  + F +     W    T     + 
Sbjct: 253 TGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREY 312

Query: 376 VLKLPR-LQNLVMQHVDHSAGY--------------LIDLLQGLLRYDPSSRLTAHDALK 420
                R L N++        G                 DL+  +L YDP +R+  + AL+
Sbjct: 313 KPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQ 372

Query: 421 HPFFTR 426
           H FF +
Sbjct: 373 HSFFKK 378

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  407 bits (1049), Expect = e-141
 Identities = 98/367 (26%), Positives = 167/367 (45%), Gaps = 46/367 (12%)

Query: 78  NDDKDGHYLFALGENLT-SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE 136
           +    G++    GE    +RY ++RK+G G F  V    D      VA+K+VR  K Y E
Sbjct: 1   DYRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60

Query: 137 AAMTEIDVLELLKRYDRS------GSRCVQIRNWFDYRN----HICIVFEMLGPSLYDFL 186
           AA  EI +L+ +   D +       +  +++ + F+++     H+ +VFE+LG +L   +
Sbjct: 61  AAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI 120

Query: 187 RKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTA 245
           +K  +R  P+  V++I +QLL  + +MH    +IHTD+KPEN+L    +  +        
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE-------- 172

Query: 246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMW 305
                            IK+ D G+  +  + +   + TR YR+PEV+LG  W    D+W
Sbjct: 173 -------------NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIW 219

Query: 306 SVGCILIELCSGEALFQTHE------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRG 359
           S  C++ EL +G+ LF+  E      + +H+A +  +LG +P ++L+        F  RG
Sbjct: 220 STACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG 279

Query: 360 RLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
            L                 L  +     +     A  + D L  +L+ DP  R  A   +
Sbjct: 280 LLRNISKLKFW-------PLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 332

Query: 420 KHPFFTR 426
            HP+   
Sbjct: 333 NHPWLKD 339

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  343 bits (880), Expect = e-115
 Identities = 109/389 (28%), Positives = 189/389 (48%), Gaps = 49/389 (12%)

Query: 75  QWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY 134
              +  K G++L  +G+    RY ++RK+G G F  V    D +  + VA+KVV+S + Y
Sbjct: 17  DPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY 76

Query: 135 REAAMTEIDVLELLKRYDRSG---SRCVQIRNWFDYR----NHICIVFEMLGPSLYDFLR 187
            E A+ EI +L+ ++  D +       VQ+ + F        HIC+VFE+LG  L  ++ 
Sbjct: 77  TETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWII 136

Query: 188 KNNYRPFPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILFVSPEY------LKIPD 240
           K+NY+  P+  V++I +Q+L+ + ++H   R+IHTD+KPENIL    E        +  +
Sbjct: 137 KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATE 196

Query: 241 YKVTARSPTDVNYYKRLP----------------KSSAIKVIDFGSTAYEHQEHNYIVST 284
           ++ +   P   +     P                +   +K+ D G+  + H+     + T
Sbjct: 197 WQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQT 256

Query: 285 RHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE------HLAMMERVLG 338
           R YR+ EV++G G++ P D+WS  C+  EL +G+ LF+ H   E      H+A++  +LG
Sbjct: 257 RQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG 316

Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS---AG 395
            +P+ ++       E F ++G L               LK   L  ++++  + S   A 
Sbjct: 317 KVPRKLIVAGKYSKEFFTKKGDLKHITK----------LKPWGLFEVLVEKYEWSQEEAA 366

Query: 396 YLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
              D L  +L   P  R TA + L+HP+ 
Sbjct: 367 GFTDFLLPMLELIPEKRATAAECLRHPWL 395

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  193 bits (492), Expect = 2e-58
 Identities = 82/346 (23%), Positives = 140/346 (40%), Gaps = 72/346 (20%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA----AMTEIDVLELLKRY 151
           +Y+ L  +GEG++G V+ C +++TG  VAIK         +     AM EI +L+ L+  
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFL-ESDDDKMVKKIAMREIKLLKQLRH- 83

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                  V +      +    +VFE +  ++ D L           +V++   Q++  + 
Sbjct: 84  ----ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIG 138

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-- 269
           F H   +IH D+KPENIL                           + +S  +K+ DFG  
Sbjct: 139 FCHSHNIIHRDIKPENIL---------------------------VSQSGVVKLCDFGFA 171

Query: 270 ------STAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQ 322
                    Y+ +     V+TR YRAPE+++G   +    D+W++GC++ E+  GE LF 
Sbjct: 172 RTLAAPGEVYDDE-----VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFP 226

Query: 323 THENLEHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
              +++ L  +   LG  IP+H                         +       L   +
Sbjct: 227 GDSDIDQLYHIMMCLGNLIPRH-------------------QELFNKNPVFAGVRLPEIK 267

Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
            +  + +     +  +IDL +  L  DP  R    + L H FF  D
Sbjct: 268 EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  192 bits (490), Expect = 3e-58
 Identities = 95/344 (27%), Positives = 150/344 (43%), Gaps = 72/344 (20%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA----AMTEIDVLELLKRY 151
           +Y+ + KIGEG++G V  C +R+TG+ VAIK      +        A+ EI +L+ LK  
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFL-ESEDDPVIKKIALREIRMLKQLKH- 61

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                  V +   F  +  + +VFE    ++   L +   R  P  LV+ I  Q L+ V 
Sbjct: 62  ----PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVN 116

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-- 269
           F H    IH D+KPENIL                           + K S IK+ DFG  
Sbjct: 117 FCHKHNCIHRDVKPENIL---------------------------ITKHSVIKLCDFGFA 149

Query: 270 ------STAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
                 S  Y+ +     V+TR YR+PE+++G   +  P D+W++GC+  EL SG  L+ 
Sbjct: 150 RLLTGPSDYYDDE-----VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWP 204

Query: 323 THENLEHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
              +++ L ++ + LG  IP+H                       +T++      +  P 
Sbjct: 205 GKSDVDQLYLIRKTLGDLIPRH-------------------QQVFSTNQYFSGVKIPDPE 245

Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
               +     + +   + LL+G L  DP+ RLT    L HP+F 
Sbjct: 246 DMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  187 bits (478), Expect = 2e-56
 Identities = 92/366 (25%), Positives = 146/366 (39%), Gaps = 92/366 (25%)

Query: 89  LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA-------AMTE 141
           LG   TSRY+ + +IG G +G V    D  +G  VA+K VR +              + E
Sbjct: 3   LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR-VPNGGGGGGGLPISTVRE 61

Query: 142 IDVLELLKRYDRS---GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL 198
           + +L  L+ ++         V   +  D    + +VFE +   L  +L K      P + 
Sbjct: 62  VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAET 121

Query: 199 VREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
           ++++ RQ L  + F+H   ++H DLKPENIL                           + 
Sbjct: 122 IKDLMRQFLRGLDFLHANCIVHRDLKPENIL---------------------------VT 154

Query: 259 KSSAIKVIDFG-------STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 311
               +K+ DFG         A         V T  YRAPEV+L   ++ P DMWSVGCI 
Sbjct: 155 SGGTVKLADFGLARIYSYQMALTPV-----VVTLWYRAPEVLLQSTYATPVDMWSVGCIF 209

Query: 312 IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRE 371
            E+   + LF  +   + L  +  ++G            P E        DWP       
Sbjct: 210 AEMFRRKPLFCGNSEADQLGKIFDLIGL-----------PPED-------DWPR------ 245

Query: 372 SIKAVLKLP----------RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH 421
                + LP           +Q++V   ++ S      LL  +L ++P  R++A  AL+H
Sbjct: 246 ----DVSLPRGAFPPRGPRPVQSVV-PEMEESG---AQLLLEMLTFNPHKRISAFRALQH 297

Query: 422 PFFTRD 427
            +  +D
Sbjct: 298 SYLHKD 303

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  183 bits (466), Expect = 2e-54
 Identities = 87/347 (25%), Positives = 153/347 (44%), Gaps = 73/347 (21%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKR 150
            RY+ + K+GEGT+G+V   +D  T ETVAIK +R ++   E     A+ E+ +L+ L+ 
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR-LEHEEEGVPGTAIREVSLLKELQH 92

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                   +++++   + + + ++FE     L  ++ KN      + +++    QL+  V
Sbjct: 93  -----RNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKN--PDVSMRVIKSFLYQLINGV 145

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
            F H  R +H DLKP+N+L    +                        ++  +K+ DFG 
Sbjct: 146 NFCHSRRCLHRDLKPQNLLLSVSDA----------------------SETPVLKIGDFGL 183

Query: 270 -------STAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALF 321
                     + H+     + T  YR PE++LG   +S   D+WS+ CI  E+     LF
Sbjct: 184 ARAFGIPIRQFTHE-----IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF 238

Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL---K 378
                ++ L  +  VLG            P +         WP G T+    K      +
Sbjct: 239 PGDSEIDQLFKIFEVLGL-----------PDDT-------TWP-GVTALPDWKQSFPKFR 279

Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
              L+ ++   +D      +DLL  +L  DP  R++A +AL+HP+F+
Sbjct: 280 GKTLKRVLGALLDDEG---LDLLTAMLEMDPVKRISAKNALEHPYFS 323

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  181 bits (461), Expect = 5e-54
 Identities = 68/352 (19%), Positives = 125/352 (35%), Gaps = 99/352 (28%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYD 152
            Y IL++IG G   +V   L+ E  +  AIK V    +  +  ++   EI  L  L+++ 
Sbjct: 29  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
               + +++ ++     +I +V E     L  +L+K   +       +   + +LE V  
Sbjct: 88  D---KIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHT 142

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-ST 271
           +H   ++H+DLKP N L V                               +K+IDFG + 
Sbjct: 143 IHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIAN 174

Query: 272 AYEHQEHNYIVSTR----HYRAPEVILGLGW-----------SYPCDMWSVGCILIELCS 316
             +    + +  ++    +Y  PE I  +             S   D+WS+GCIL  +  
Sbjct: 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234

Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G+  FQ   N                  L  +  P  +       ++P+           
Sbjct: 235 GKTPFQQIIN--------------QISKLHAIIDPNHEI------EFPD----------- 263

Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                         +       D+L+  L+ DP  R++  + L HP+     
Sbjct: 264 ------------IPEKDL---QDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  181 bits (462), Expect = 6e-54
 Identities = 91/346 (26%), Positives = 147/346 (42%), Gaps = 70/346 (20%)

Query: 95  SRYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYRE----AAMTEIDVLELLK 149
            +Y+ + +IGEG +G+V    D +  G  VA+K VR ++   E    + + E+ VL  L+
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLE 69

Query: 150 RYDRS---GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
            ++         V   +  D    + +VFE +   L  +L K      P + ++++  QL
Sbjct: 70  TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L  + F+H  R++H DLKP+NIL                           +  S  IK+ 
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNIL---------------------------VTSSGQIKLA 162

Query: 267 DFG-------STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           DFG         A         V T  YRAPEV+L   ++ P D+WSVGCI  E+   + 
Sbjct: 163 DFGLARIYSFQMALTSV-----VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
           LF+   +++ L  +  V+G            P E+       DWP               
Sbjct: 218 LFRGSSDVDQLGKILDVIGL-----------PGEE-------DWPRDVALPRQAFHSKSA 259

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
             ++  V   +D       DLL   L ++P+ R++A+ AL HP+F 
Sbjct: 260 QPIEKFV-TDIDELG---KDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  184 bits (468), Expect = 6e-54
 Identities = 87/350 (24%), Positives = 147/350 (42%), Gaps = 81/350 (23%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY--REAAMTEIDVLELLKRY 151
              Y   + IG G+FG V      ++GE VAIK V   K++  RE        L+++++ 
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE--------LQIMRKL 104

Query: 152 DRSGSRCVQIRNWF------DYRNHICIVFEMLGPSLYDFLRKNNYR--PFPVDLVREIG 203
           D      V++R +F          ++ +V + +  ++Y   R  +      PV  V+   
Sbjct: 105 DH--CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 162

Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            QL   +A++H   + H D+KP+N+L                     ++     P ++ +
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLL---------------------LD-----PDTAVL 196

Query: 264 KVIDFGST-AYEHQEHN--YIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEA 319
           K+ DFGS       E N  YI  +R+YRAPE+I G   ++   D+WS GC+L EL  G+ 
Sbjct: 197 KLCDFGSAKQLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
           +F     ++ L  + +VLG   +  ++ ++    +F                      K 
Sbjct: 256 IFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF----------------------KF 293

Query: 380 PR-----LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           P+        +        A   I L   LL Y P++RLT  +A  H FF
Sbjct: 294 PQIKAHPWTKVFRPRTPPEA---IALCSRLLEYTPTARLTPLEACAHSFF 340

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  182 bits (465), Expect = 1e-53
 Identities = 95/351 (27%), Positives = 151/351 (43%), Gaps = 76/351 (21%)

Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY--REAAMTEIDVLEL 147
           GE     Y   + IG G+FG V      E+ E VAIK V   K++  RE        L++
Sbjct: 35  GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRE--------LQI 85

Query: 148 LKRYDRSGSRCVQIRNWF------DYRNHICIVFEMLGPSLYDFLR--KNNYRPFPVDLV 199
           ++         V ++ +F           + +V E +  ++Y   R      +  P+ L+
Sbjct: 86  MRIVKHP--NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLI 143

Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
           +    QLL  +A++H + + H D+KP+N+L                     ++     P 
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLL---------------------LD-----PP 177

Query: 260 SSAIKVIDFGST-AYEHQEHN--YIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELC 315
           S  +K+IDFGS       E N  YI  +R+YRAPE+I G   ++   D+WS GC++ EL 
Sbjct: 178 SGVLKLIDFGSAKILIAGEPNVSYIC-SRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236

Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRV--DKPAEKFVRRGRLDWPEGATSRESI 373
            G+ LF     ++ L  + +VLG   +  +K +  +    KF +     +          
Sbjct: 237 QGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPF---------- 286

Query: 374 KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                      +        A   IDL+  LL Y PS+RLTA +AL HPFF
Sbjct: 287 ---------SKVFRPRTPPDA---IDLISRLLEYTPSARLTAIEALCHPFF 325

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  178 bits (454), Expect = 4e-53
 Identities = 95/345 (27%), Positives = 145/345 (42%), Gaps = 77/345 (22%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKRY 151
           +Y  L KIGEGT+G V    +   GET A+K +R ++K  E      + EI +L+ LK  
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIR-LEKEDEGIPSTTIREISILKELKH- 59

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               S  V++ +    +  + +VFE L   L   L             +    QLL  +A
Sbjct: 60  ----SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIA 114

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-- 269
           + HD R++H DLKP+N+L                           + +   +K+ DFG  
Sbjct: 115 YCHDRRVLHRDLKPQNLL---------------------------INREGELKIADFGLA 147

Query: 270 ------STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ 322
                    Y H+     + T  YRAP+V++G   +S   D+WSVGCI  E+ +G  LF 
Sbjct: 148 RAFGIPVRKYTHE-----IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP 202

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
                + L  + R+LG            P  K       +WP   T          +   
Sbjct: 203 GVSEADQLMRIFRILGT-----------PNSK-------NWP-NVTELPKYDPNFTVYEP 243

Query: 383 QNL--VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                 ++ +D S    IDLL  +L+ DP+ R+TA  AL+H +F 
Sbjct: 244 LPWESFLKGLDESG---IDLLSKMLKLDPNQRITAKQALEHAYFK 285

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  178 bits (453), Expect = 5e-53
 Identities = 96/346 (27%), Positives = 151/346 (43%), Gaps = 77/346 (22%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKRY 151
           +Y+ L KIGEGT+G V    +RET E VA+K VR +    E    +A+ EI +L+ LK  
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKELKH- 60

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                  V++ +       + +VFE     L  +    N      ++V+    QLL+ + 
Sbjct: 61  ----KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLG 115

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-- 269
           F H   ++H DLKP+N+L                           + ++  +K+ +FG  
Sbjct: 116 FCHSRNVLHRDLKPQNLL---------------------------INRNGELKLANFGLA 148

Query: 270 ------STAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCS-GEALF 321
                    Y  +     V T  YR P+V+ G   +S   DMWS GCI  EL + G  LF
Sbjct: 149 RAFGIPVRCYSAE-----VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203

Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
             ++  + L  + R+LG            P E+        WP   T     K     P 
Sbjct: 204 PGNDVDDQLKRIFRLLGT-----------PTEE-------QWP-SMTKLPDYKPYPMYPA 244

Query: 382 LQNL--VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
             +L  V+  ++ +     DLLQ LL+ +P  R++A +AL+HP+F+
Sbjct: 245 TTSLVNVVPKLNATG---RDLLQNLLKCNPVQRISAEEALQHPYFS 287

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  177 bits (452), Expect = 2e-52
 Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 99/352 (28%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYD 152
            Y IL++IG G   +V   L+ E  +  AIK V    +  +  ++   EI  L  L+++ 
Sbjct: 10  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
               + +++ ++     +I +V E     L  +L+K   +       +   + +LE V  
Sbjct: 69  D---KIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHT 123

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-ST 271
           +H   ++H+DLKP N L V                               +K+IDFG + 
Sbjct: 124 IHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIAN 155

Query: 272 AYEHQEHNY----IVSTRHYRAPEVILGLG-----------WSYPCDMWSVGCILIELCS 316
             +    +      V T +Y  PE I  +             S   D+WS+GCIL  +  
Sbjct: 156 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 215

Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G+  FQ   N                  L  +  P  +       ++P+    ++     
Sbjct: 216 GKTPFQQIIN--------------QISKLHAIIDPNHEI------EFPDIP-EKD----- 249

Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                               L D+L+  L+ DP  R++  + L HP+     
Sbjct: 250 --------------------LQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  175 bits (447), Expect = 7e-52
 Identities = 89/351 (25%), Positives = 146/351 (41%), Gaps = 76/351 (21%)

Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVL 145
            + L  +Y+ L K+GEGT+G V    D   G  VA+K +R +    E     A+ EI +L
Sbjct: 16  FQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIR-LDAEDEGIPSTAIREISLL 73

Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
           + L          V + +       + +VFE +   L   L +N         ++    Q
Sbjct: 74  KELHH-----PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQ 127

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           LL  VA  H  R++H DLKP+N+L                           +    A+K+
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLL---------------------------INSDGALKL 160

Query: 266 IDFG--------STAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCS 316
            DFG          +Y H+     V T  YRAP+V++G   +S   D+WS+GCI  E+ +
Sbjct: 161 ADFGLARAFGIPVRSYTHE-----VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT 215

Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G+ LF    + + L  +  +LG            P  +       +WP+        +  
Sbjct: 216 GKPLFPGVTDDDQLPKIFSILGT-----------PNPR-------EWPQVQELPLWKQRT 257

Query: 377 LKLPRLQNL--VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            ++   +    ++          IDLL  +L +DP+ R++A DA+ HP+F 
Sbjct: 258 FQVFEKKPWSSIIPGFCQEG---IDLLSNMLCFDPNKRISARDAMNHPYFK 305

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  175 bits (447), Expect = 8e-52
 Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 73/349 (20%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA-------AMTEIDVLEL 147
           S++K L K+G GT+  V   L++ TG  VA+K V+      ++       A+ EI +++ 
Sbjct: 5   SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK-----LDSEEGTPSTAIREISLMKE 59

Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNY----RPFPVDLVREIG 203
           LK         V++ +     N + +VFE +   L  ++         R   ++LV+   
Sbjct: 60  LKH-----ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQ 114

Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            QLL+ +AF H+ +++H DLKP+N+L      LK+ D+ + AR+                
Sbjct: 115 WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGL-ARA---------------- 157

Query: 264 KVIDFGS--TAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEAL 320
               FG     +  +     V T  YRAP+V++G   +S   D+WS GCIL E+ +G+ L
Sbjct: 158 ----FGIPVNTFSSE-----VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPL 208

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
           F    + E L ++  ++G            P E         WP   T        ++  
Sbjct: 209 FPGTNDEEQLKLIFDIMGT-----------PNES-------LWP-SVTKLPKYNPNIQQR 249

Query: 381 RLQNLVMQHVDHSAGYL----IDLLQGLLRYDPSSRLTAHDALKHPFFT 425
             ++L      H+   L    +D L GLL+ +P  RL+A  AL HP+F 
Sbjct: 250 PPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  175 bits (447), Expect = 1e-51
 Identities = 79/342 (23%), Positives = 153/342 (44%), Gaps = 60/342 (17%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
                Y+++RK+G G + +V + ++    E V +K+++ +KK +     EI +LE L   
Sbjct: 33  GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENL--- 87

Query: 152 DRSGSRCVQIRNWF--DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
            R G   + + +           +VFE +  +  DF  K  Y+      +R    ++L+ 
Sbjct: 88  -RGGPNIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKA 142

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + + H + ++H D+KP N++                     +++  R      +++ID+G
Sbjct: 143 LDYCHSMGIMHRDVKPHNVM---------------------IDHEHR-----KLRLIDWG 176

Query: 270 --STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSG-EALFQTHE 325
                +  QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+
Sbjct: 177 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 236

Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR--LQ 383
           N + L  + +VLG           +    ++ +  ++             + +  R   +
Sbjct: 237 NYDQLVRIAKVLGT----------EDLYDYIDKYNIELD-----PRFNDILGRHSRKRWE 281

Query: 384 NLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFF 424
             V     H      +D L  LLRYD  SRLTA +A++HP+F
Sbjct: 282 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  172 bits (437), Expect = 3e-50
 Identities = 91/340 (26%), Positives = 142/340 (41%), Gaps = 66/340 (19%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKRY 151
            Y  L K+GEGT+  V     + T   VA+K +R   ++ E     A+ E+ +L+ LK  
Sbjct: 3   TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL--EHEEGAPCTAIREVSLLKDLKH- 59

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
               +  V + +       + +VFE L   L  +L         +  V+    QLL  +A
Sbjct: 60  ----ANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLA 114

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-S 270
           + H  +++H DLKP+N+L                           + +   +K+ DFG +
Sbjct: 115 YCHRQKVLHRDLKPQNLL---------------------------INERGELKLADFGLA 147

Query: 271 TAYEHQEHNY--IVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENL 327
            A       Y   V T  YR P+++LG   +S   DMW VGCI  E+ +G  LF      
Sbjct: 148 RAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE 207

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL-- 385
           E L  + R+LG            P E+        WP   ++ E         R + L  
Sbjct: 208 EQLHFIFRILGT-----------PTEE-------TWPGILSNEEFKTYNYPKYRAEALLS 249

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
               +D       DLL  LL+++  +R++A DA+KHPFF 
Sbjct: 250 HAPRLDSDG---ADLLTKLLQFEGRNRISAEDAMKHPFFL 286

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  171 bits (437), Expect = 4e-50
 Identities = 87/348 (25%), Positives = 142/348 (40%), Gaps = 78/348 (22%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYRE----AAMTEIDVLELL 148
            RY+ L  +GEG F  V    D+ T + VAIK ++     + ++     A+ EI +L+ L
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                     + + + F ++++I +VF+ +   L   + K+N        ++      L+
Sbjct: 70  SH-----PNIIGLLDAFGHKSNISLVFDFMETDLEVII-KDNSLVLTPSHIKAYMLMTLQ 123

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H   ++H DLKP N+L                           L ++  +K+ DF
Sbjct: 124 GLEYLHQHWILHRDLKPNNLL---------------------------LDENGVLKLADF 156

Query: 269 G--------STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEA 319
           G        + AY HQ     V TR YRAPE++ G   +    DMW+VGCIL EL     
Sbjct: 157 GLAKSFGSPNRAYTHQ-----VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP 211

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
                 +L+ L  +   LG            P E+        WP    S          
Sbjct: 212 FLPGDSDLDQLTRIFETLGT-----------PTEE-------QWP-DMCSLPDYVTFKSF 252

Query: 380 PRLQNL--VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
           P    L  +           +DL+QGL  ++P +R+TA  ALK  +F+
Sbjct: 253 PG-IPLHHIFSAAGDDL---LDLIQGLFLFNPCARITATQALKMKYFS 296

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  173 bits (439), Expect = 6e-50
 Identities = 68/352 (19%), Positives = 130/352 (36%), Gaps = 99/352 (28%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYD 152
            Y IL++IG G   +V   L+ E  +  AIK V    +  +  ++   EI  L  L+++ 
Sbjct: 57  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
               + +++ ++     +I +V E     L  +L+K   +       +   + +LE V  
Sbjct: 116 D---KIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHT 170

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-ST 271
           +H   ++H+DLKP N L V                               +K+IDFG + 
Sbjct: 171 IHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIAN 202

Query: 272 AYEHQEHNYIVSTR----HYRAPEVILGLGW-----------SYPCDMWSVGCILIELCS 316
             +    + +  ++    +Y  PE I  +             S   D+WS+GCIL  +  
Sbjct: 203 QMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262

Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G+  FQ   N   ++ +  ++ P                     +++P+    ++     
Sbjct: 263 GKTPFQQIIN--QISKLHAIIDP------------------NHEIEFPDIP-EKD----- 296

Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                               L D+L+  L+ DP  R++  + L HP+     
Sbjct: 297 --------------------LQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  170 bits (434), Expect = 2e-49
 Identities = 92/354 (25%), Positives = 146/354 (41%), Gaps = 74/354 (20%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
                R+++ R  G+GTFG V    ++ TG +VAIK V    ++      E+ +++ L  
Sbjct: 19  RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAV 75

Query: 151 YDRSGSRCVQIRNWF-----DYRNHIC--IVFEMLGPSLYDFLRKNNYR--PFPVDLVRE 201
                   VQ++++F       R  I   +V E +  +L+   R    R    P  L++ 
Sbjct: 76  LHHPN--IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV 133

Query: 202 IGRQLLECVAFMHD--LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
              QL+  +  +H   + + H D+KP N+L                     VN       
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVL---------------------VN-----EA 167

Query: 260 SSAIKVIDFGST-AYEHQEHN--YIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELC 315
              +K+ DFGS       E N  YI  +R+YRAPE+I G   ++   D+WSVGCI  E+ 
Sbjct: 168 DGTLKLCDFGSAKKLSPSEPNVAYIC-SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226

Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA 375
            GE +F+   +   L  + RVLG            P+ + +R+                 
Sbjct: 227 LGEPIFRGDNSAGQLHEIVRVLGC-----------PSREVLRKLN-----------PSHT 264

Query: 376 VLKLPR-----LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            + L         N+   H    A    DLL  LL+Y P  R+  ++AL HP+F
Sbjct: 265 DVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  170 bits (432), Expect = 5e-49
 Identities = 86/372 (23%), Positives = 154/372 (41%), Gaps = 87/372 (23%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY--RE------------ 136
           E  + +Y + + +G G+FG V +  D E+G+  A+K V    +Y  RE            
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62

Query: 137 ----------------AAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP 180
                                 D  +L  + +   +    +        ++ ++ E +  
Sbjct: 63  IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD 122

Query: 181 SLYDFLR--KNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
           +L+  L+    + R  P++L+     QL   V F+H L + H D+KP+N+L         
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL--------- 173

Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST-AYEHQEHN--YIVSTRHYRAPEVILG 295
                       VN      K + +K+ DFGS       E +  YI  +R YRAPE++LG
Sbjct: 174 ------------VN-----SKDNTLKLCDFGSAKKLIPSEPSVAYIC-SRFYRAPELMLG 215

Query: 296 -LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRV--DKPA 352
              ++   D+WS+GC+  EL  G+ LF    +++ L  + +++G   +  + R+      
Sbjct: 216 ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTE 275

Query: 353 EKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR 412
            +F      DW                   + ++ +     A   IDLL+ +LRY+P  R
Sbjct: 276 VRFPTLKAKDW-------------------RKILPEGTPSLA---IDLLEQILRYEPDLR 313

Query: 413 LTAHDALKHPFF 424
           +  ++A+ HPFF
Sbjct: 314 INPYEAMAHPFF 325

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  166 bits (423), Expect = 1e-48
 Identities = 68/341 (19%), Positives = 124/341 (36%), Gaps = 68/341 (19%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK---- 149
            S ++ +  +G+G FGQV+   +       AIK +R  ++     ++E+ +L  L     
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64

Query: 150 -RY---DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGR 204
            RY          V+       ++ + I  E     +LYD +   N      D    + R
Sbjct: 65  VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFR 123

Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+LE ++++H   +IH DLKP NI       +KI D+ + A++        +L   +   
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL-AKNVHRSLDILKLDSQNLPG 182

Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQT 323
             D  ++A         + T  Y A EV+ G G  +   DM+S+G I  E+      F T
Sbjct: 183 SSDNLTSA---------IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP---FST 230

Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
                ++                       K +R   +++P      +            
Sbjct: 231 GMERVNIL----------------------KKLRSVSIEFPPDFDDNKMKVE-------- 260

Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                           +++ L+ +DP+ R  A   L   + 
Sbjct: 261 --------------KKIIRLLIDHDPNKRPGARTLLNSGWL 287

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  166 bits (422), Expect = 3e-48
 Identities = 67/340 (19%), Positives = 127/340 (37%), Gaps = 79/340 (23%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
           + L  +Y I   +G G FG V  C++  + +T   K V+     +     EI +L + + 
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH 60

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   + +   F+    + ++FE + G  +++ +  + +       +     Q+ E 
Sbjct: 61  -----RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFE-LNEREIVSYVHQVCEA 114

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + F+H   + H D++PENI++ +                           SS IK+I+FG
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRR-------------------------SSTIKIIEFG 149

Query: 270 -STAYEH-QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
            +   +       + +   Y APEV      S   DMWS+G ++  L SG   F    N 
Sbjct: 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
           +   ++E ++                         + E A                    
Sbjct: 210 Q---IIENIM--------------------NAEYTFDEEA-------------------F 227

Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
           + +   A   +D +  LL  +  SR+TA +AL+HP+  + 
Sbjct: 228 KEISIEA---MDFVDRLLVKERKSRMTASEALQHPWLKQK 264

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  170 bits (432), Expect = 5e-48
 Identities = 86/364 (23%), Positives = 150/364 (41%), Gaps = 83/364 (22%)

Query: 70  QNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV- 128
           +N   Q       G ++ +   +L+  Y+ ++K+G G +G+VL C D+ T    AIK++ 
Sbjct: 12  ENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIR 71

Query: 129 --RSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDF 185
                       + E+ VL+LL          +++ ++F+ + +  +V E   G  L+D 
Sbjct: 72  KTSVSTSSNSKLLEEVAVLKLL-----DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDE 126

Query: 186 LRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA 245
           +       F       I +Q+L  V ++H   ++H DLKPEN+L  S E           
Sbjct: 127 IIHRMK--FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE----------- 173

Query: 246 RSPTDVNYYKRLPKSSAIKVIDFG-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCD 303
                        K + IK++DFG S  +E+Q+     + T +Y APEV+    +   CD
Sbjct: 174 -------------KDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCD 219

Query: 304 MWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW 363
           +WS+G IL  L +G   F                G   Q +L++        V +G+  +
Sbjct: 220 VWSIGVILFILLAGYPPFG---------------GQTDQEILRK--------VEKGKYTF 256

Query: 364 PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                   S  A                       DL++ +L++D   R++A  AL+HP+
Sbjct: 257 DSPEWKNVSEGA----------------------KDLIKQMLQFDSQRRISAQQALEHPW 294

Query: 424 FTRD 427
               
Sbjct: 295 IKEM 298

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  165 bits (419), Expect = 9e-48
 Identities = 76/357 (21%), Positives = 133/357 (37%), Gaps = 79/357 (22%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK------VVRSIKKYREAAMTE---- 141
           +L SRY  L+ +G G  G V   +D +  + VAIK              RE  +      
Sbjct: 8   DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDH 67

Query: 142 ---IDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL 198
              + V E+L       +  V         N + IV E +   L + L +    P   + 
Sbjct: 68  DNIVKVFEILGPSGSQLTDDVGSLTEL---NSVYIVQEYMETDLANVLEQG---PLLEEH 121

Query: 199 VREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
            R    QLL  + ++H   ++H DLKP N+                      +N      
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPANLF---------------------IN-----T 155

Query: 259 KSSAIKVIDFG---STAYEHQEHNYI---VSTRHYRAPEVILGL-GWSYPCDMWSVGCIL 311
           +   +K+ DFG        +    ++   + T+ YR+P ++L    ++   DMW+ GCI 
Sbjct: 156 EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF 215

Query: 312 IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR----RGRLDWPEGA 367
            E+ +G+ LF     LE + ++   +  + +   + +      ++R           +  
Sbjct: 216 AEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQ-- 273

Query: 368 TSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                      LP         +   A   +D L+ +L + P  RLTA +AL HP+ 
Sbjct: 274 ----------LLP--------GISREA---VDFLEQILTFSPMDRLTAEEALSHPYM 309

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  164 bits (417), Expect = 2e-47
 Identities = 63/337 (18%), Positives = 104/337 (30%), Gaps = 88/337 (26%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRY 151
             ++ L ++G G++G+V     +E G   A+K   S     K R   + E+   E + ++
Sbjct: 57  QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 CV++   ++    + +  E+ GPSL            P   V    R  L  +A
Sbjct: 117 P----CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALA 171

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-S 270
            +H   L+H D+KP NI                            L      K+ DFG  
Sbjct: 172 HLHSQGLVHLDVKPANIF---------------------------LGPRGRCKLGDFGLL 204

Query: 271 TAYEHQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                            Y APE++ G  +    D++S+G  ++E+     L    E  + 
Sbjct: 205 VELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQ 263

Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
           L     +       +                        S E                  
Sbjct: 264 L-RQGYLPPEFTAGL------------------------SSE------------------ 280

Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                  L  +L  +L  DP  R TA   L  P   +
Sbjct: 281 -------LRSVLVMMLEPDPKLRATAEALLALPVLRQ 310

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  164 bits (416), Expect = 4e-47
 Identities = 77/402 (19%), Positives = 129/402 (32%), Gaps = 129/402 (32%)

Query: 80  DKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR------SIKK 133
            ++ ++       L  +Y +   IG+G++G V   ++ +T    AIK++          K
Sbjct: 11  RENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPK 70

Query: 134 YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYR 192
             E   TE+ +++ L           ++   ++   +IC+V E+  G  L D L      
Sbjct: 71  DVERIKTEVRLMKKL-----HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDD 125

Query: 193 --------------------------------------PFPVDLVREIGRQLLECVAFMH 214
                                                      L+  I RQ+   + ++H
Sbjct: 126 STGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG----- 269
           +  + H D+KPEN LF + +                         S  IK++DFG     
Sbjct: 186 NQGICHRDIKPENFLFSTNK-------------------------SFEIKLVDFGLSKEF 220

Query: 270 --STAYEHQEHNYIVSTRHYRAPEVILGLGWSY--PCDMWSVGCILIELCSGEALFQTHE 325
                 E+        T ++ APEV+     SY   CD WS G +L  L  G   F    
Sbjct: 221 YKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFP-GV 279

Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
           N      + +VL                      +L +     +  S  A          
Sbjct: 280 N--DADTISQVL--------------------NKKLCFENPNYNVLSPLA---------- 307

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                        DLL  LL  +   R  A  AL+HP+ ++ 
Sbjct: 308 ------------RDLLSNLLNRNVDERFDAMRALQHPWISQF 337

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  163 bits (416), Expect = 6e-47
 Identities = 87/363 (23%), Positives = 150/363 (41%), Gaps = 91/363 (25%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREA----AMTEIDVLELLKR 150
           S+Y+ L KIG+GTFG+V     R+TG+ VA+K V  ++  +E     A+ EI +L+LLK 
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLK- 74

Query: 151 YDRSGSRCVQI-----RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
              +    ++I       +   +  I +VF+     L   L  N    F +  ++ + + 
Sbjct: 75  -HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQM 132

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           LL  + ++H  +++H D+K  N+L                           + +   +K+
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVL---------------------------ITRDGVLKL 165

Query: 266 IDFG-----STAYEHQEHNY--IVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSG 317
            DFG     S A   Q + Y   V T  YR PE++LG   +  P D+W  GCI+ E+ + 
Sbjct: 166 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 225

Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
             + Q +     LA++ ++ G               +        WP           V 
Sbjct: 226 SPIMQGNTEQHQLALISQLCGS-----------ITPE-------VWPN----------VD 257

Query: 378 KLP-------------RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                           ++++ +  +V       +DL+  LL  DP+ R+ + DAL H FF
Sbjct: 258 NYELYEKLELVKGQKRKVKDRLKAYVRDPYA--LDLIDKLLVLDPAQRIDSDDALNHDFF 315

Query: 425 TRD 427
             D
Sbjct: 316 WSD 318

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  162 bits (413), Expect = 8e-47
 Identities = 75/347 (21%), Positives = 124/347 (35%), Gaps = 85/347 (24%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-------REAAMTEID 143
           + +   Y I  ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L  +          + + + ++ R  + ++ E++ G  L+DFL +        +     
Sbjct: 68  ILRQV-----LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSF 120

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L+ V ++H  ++ H DLKPENI+ +                               
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKN-----------------------IPIPH 157

Query: 263 IKVIDFG-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
           IK+IDFG +   E       I  T  + APE++         DMWS+G I   L SG + 
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
           F               LG   Q  L          +     D+ E               
Sbjct: 218 F---------------LGDTKQETLAN--------ITSVSYDFDEEF------------- 241

Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                   H    A    D ++ LL  +   RLT  +AL+HP+ T  
Sbjct: 242 ------FSHTSELA---KDFIRKLLVKETRKRLTIQEALRHPWITPV 279

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  166 bits (423), Expect = 8e-47
 Identities = 83/344 (24%), Positives = 142/344 (41%), Gaps = 84/344 (24%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLE 146
              + RYK  R +G+G+FG+V+ C D+ TG+  A+KV+       K  +E+ + E+ +L+
Sbjct: 22  AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81

Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQ 205
            L          +++  +F+ + +  +V E+  G  L+D +       F       I RQ
Sbjct: 82  QL-----DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQ 134

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +L  + +MH  +++H DLKPEN+L  S                          K + I++
Sbjct: 135 VLSGITYMHKNKIVHRDLKPENLLLESKS------------------------KDANIRI 170

Query: 266 IDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
           IDFG + +          + T +Y APEV+ G  +   CD+WS G IL  L SG   F  
Sbjct: 171 IDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 229

Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
               +   ++++V                     +G+  +      + S  A        
Sbjct: 230 ANEYD---ILKKVE--------------------KGKYTFELPQWKKVSESA-------- 258

Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                          DL++ +L Y PS R++A DAL H +    
Sbjct: 259 --------------KDLIRKMLTYVPSMRISARDALDHEWIQTY 288

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  164 bits (417), Expect = 9e-47
 Identities = 77/341 (22%), Positives = 134/341 (39%), Gaps = 80/341 (23%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLK 149
            ++   Y IL ++G G FG V  C+++ TG     K + +     +     EI ++  L 
Sbjct: 47  GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH 106

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                  + + + + F+ +  + ++ E L G  L+D +   +Y+      V    RQ  E
Sbjct: 107 H-----PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACE 160

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +  MH+  ++H D+KPENI+  + +                         +S++K+IDF
Sbjct: 161 GLKHMHEHSIVHLDIKPENIMCETKK-------------------------ASSVKIIDF 195

Query: 269 G-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           G +T     E      +T  + APE++      +  DMW++G +   L SG + F     
Sbjct: 196 GLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF----- 250

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
                      G      L+         V+R   ++ E A                   
Sbjct: 251 ----------AGEDDLETLQN--------VKRCDWEFDEDA------------------- 273

Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
              V   A    D ++ LL+ +P  RLT HDAL+HP+   D
Sbjct: 274 FSSVSPEA---KDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  166 bits (421), Expect = 2e-46
 Identities = 88/347 (25%), Positives = 134/347 (38%), Gaps = 83/347 (23%)

Query: 87  FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEID 143
                    RY I+  +G+G+FG+VL C DR T +  A+KV+    +  K     + E++
Sbjct: 14  LYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVE 73

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ L          +++    +  +   IV E+  G  L+D + K     F       I
Sbjct: 74  LLKKL-----DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARI 126

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+   + +MH   ++H DLKPENIL  S E                        K   
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKE------------------------KDCD 162

Query: 263 IKVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
           IK+IDFG +    Q       + T +Y APEV+ G  +   CD+WS G IL  L SG   
Sbjct: 163 IKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
           F                G     +LKR        V  G+  +        S  A     
Sbjct: 222 FY---------------GKNEYDILKR--------VETGKYAFDLPQWRTISDDA----- 253

Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                             DL++ +L + PS R+TA   L+HP+  + 
Sbjct: 254 -----------------KDLIRKMLTFHPSLRITATQCLEHPWIQKY 283

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  162 bits (412), Expect = 2e-46
 Identities = 70/345 (20%), Positives = 123/345 (35%), Gaps = 86/345 (24%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
              T  Y++   IG G++     C+ + T    A+K+   I K +     EI++L     
Sbjct: 18  IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEIL----- 69

Query: 151 YDRSGSRC---VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
                 +    + +++ +D   ++ +V E M G  L D + +  +  F       +   +
Sbjct: 70  --LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTI 125

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
            + V ++H   ++H DLKP NIL+V                              +I++ 
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDES-----------------------GNPESIRIC 162

Query: 267 DFG-STAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELCSGEALFQ 322
           DFG +     +         T ++ APEV+   G+   CD+WS+G +L   L  G   F 
Sbjct: 163 DFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT-GYTPFA 221

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
              +     ++ R+                      G+     G  +  S  A  K    
Sbjct: 222 NGPDDTPEEILARIG--------------------SGKFSLSGGYWNSVSDTA--K---- 255

Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                           DL+  +L  DP  RLTA   L+HP+    
Sbjct: 256 ----------------DLVSKMLHVDPHQRLTAALVLRHPWIVHW 284

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  160 bits (408), Expect = 5e-46
 Identities = 77/347 (22%), Positives = 127/347 (36%), Gaps = 85/347 (24%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-------REAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ +          + +   ++ +  + ++ E++ G  L+DFL +        +   E 
Sbjct: 67  ILKEI-----QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +                               
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRN-----------------------VPKPR 156

Query: 263 IKVIDFG-STAYEH-QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
           IK+IDFG +   +   E   I  T  + APE++         DMWS+G I   L SG + 
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
           F               LG   Q  L          V     ++ +   S  S  A     
Sbjct: 217 F---------------LGDTKQETLAN--------VSAVNYEFEDEYFSNTSALA----- 248

Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                             D ++ LL  DP  R+T  D+L+HP+    
Sbjct: 249 -----------------KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  159 bits (404), Expect = 6e-46
 Identities = 73/346 (21%), Positives = 125/346 (36%), Gaps = 85/346 (24%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-------REAAMTEIDV 144
            +   Y++  ++G G F  V  C  + TG+  A K ++  +         RE    E+++
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 145 LELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIG 203
           L  +          + + + F+ +  + ++ E++ G  L+DFL +        D   +  
Sbjct: 62  LREI-----RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFL 114

Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
           +Q+L+ V ++H  R+ H DLKPENI+ +                            +  I
Sbjct: 115 KQILDGVHYLHSKRIAHFDLKPENIMLLDKN-----------------------VPNPRI 151

Query: 264 KVIDFG-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
           K+IDFG +   E       I  T  + APE++         DMWS+G I   L SG + F
Sbjct: 152 KLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211

Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
                          LG   Q  L  +             D+ E                
Sbjct: 212 ---------------LGETKQETLTNI--------SAVNYDFDEEY-------------- 234

Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                  +    A    D ++ LL  DP  R+T   +L+H +    
Sbjct: 235 -----FSNTSELA---KDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  160 bits (407), Expect = 8e-46
 Identities = 76/344 (22%), Positives = 125/344 (36%), Gaps = 80/344 (23%)

Query: 90  GENLTSRYKIL-RKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVL 145
            EN  + Y +  +++G G F  V  C+ + TG+  A K +   R  +  R   + EI VL
Sbjct: 23  MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVL 82

Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGR 204
           EL     +S  R + +   ++  + I ++ E   G  ++             + V  + +
Sbjct: 83  ELA----KSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIK 138

Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           Q+LE V ++H   ++H DLKP+NIL  S                              IK
Sbjct: 139 QILEGVYYLHQNNIVHLDLKPQNILLSSIY------------------------PLGDIK 174

Query: 265 VIDFG-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
           ++DFG S    H      I+ T  Y APE++     +   DMW++G I   L +  + F 
Sbjct: 175 IVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFV 234

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             +N E       +                     +  +D+ E                 
Sbjct: 235 GEDNQE---TYLNIS--------------------QVNVDYSEET--------------- 256

Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                  V   A    D +Q LL  +P  R TA   L H +  +
Sbjct: 257 ----FSSVSQLA---TDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  158 bits (402), Expect = 1e-45
 Identities = 66/354 (18%), Positives = 104/354 (29%), Gaps = 97/354 (27%)

Query: 87  FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLE 146
             + +     +K +  IG G FGQV     R  G+T  IK    +K   E A  E+  L 
Sbjct: 3   HTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKR---VKYNNEKAEREVKALA 59

Query: 147 LLK-----RY------DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPF 194
            L       Y                 +       + I  E     +L  ++ K      
Sbjct: 60  KLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119

Query: 195 PVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 254
              L  E+  Q+ + V ++H  +LI+ DLKP NI                          
Sbjct: 120 DKVLALELFEQITKGVDYIHSKKLINRDLKPSNIF------------------------- 154

Query: 255 KRLPKSSAIKVIDFG-STAYEH-QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
             L  +  +K+ DFG  T+ ++  +      T  Y +PE I    +    D++++G IL 
Sbjct: 155 --LVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA 212

Query: 313 ELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRES 372
           EL     +  T           R  G I                             ++ 
Sbjct: 213 ELL---HVCDTAFETSKFFTDLR-DGIISDIF------------------------DKK- 243

Query: 373 IKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                                      LLQ LL   P  R    + L+     +
Sbjct: 244 ------------------------EKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  165 bits (418), Expect = 1e-45
 Identities = 78/341 (22%), Positives = 132/341 (38%), Gaps = 80/341 (23%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLK 149
           +++   Y I  ++G G FG V    +R TG   A K V +  +  +E    EI  + +L+
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 212

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                    V + + F+  N + +++E + G  L++ +   + +    D   E  RQ+ +
Sbjct: 213 H-----PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCK 266

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +  MH+   +H DLKPENI+F +                           S+ +K+IDF
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKR-------------------------SNELKLIDF 301

Query: 269 G-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           G +   + ++       T  + APEV  G    Y  DMWSVG +   L SG + F     
Sbjct: 302 GLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF----- 356

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
                      G      L+         V+    +  + A                   
Sbjct: 357 ----------GGENDDETLRN--------VKSCDWNMDDSA------------------- 379

Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
              +        D ++ LL  DP++R+T H AL+HP+ T  
Sbjct: 380 FSGISEDG---KDFIRKLLLADPNTRMTIHQALEHPWLTPG 417

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  160 bits (406), Expect = 2e-45
 Identities = 74/347 (21%), Positives = 123/347 (35%), Gaps = 85/347 (24%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-------KYREAAMTEID 143
           + +   Y I  ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
           +L  +          + + + ++ R  + ++ E++ G  L+DFL +        +     
Sbjct: 68  ILRQV-----LHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSF 120

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L+ V ++H  ++ H DLKPENI+ +                               
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKN-----------------------IPIPH 157

Query: 263 IKVIDFG-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
           IK+IDFG +   E       I  T  + APE++         DMWS+G I   L SG + 
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
           F               LG   Q  L          +     D+ E               
Sbjct: 218 F---------------LGDTKQETLAN--------ITAVSYDFDEEF------------- 241

Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                        A    D ++ LL  +   RLT  +AL+HP+ T  
Sbjct: 242 ------FSQTSELA---KDFIRKLLVKETRKRLTIQEALRHPWITPV 279

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  159 bits (404), Expect = 4e-45
 Identities = 91/342 (26%), Positives = 150/342 (43%), Gaps = 49/342 (14%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT--EIDVLELLK 149
           N++S +++   +GEG +G V     + TGE VAIK +    K   A  T  EI +L+  K
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +      +Q  + F+  N + I+ E++   L+  +          D ++    Q L  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRA 124

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           V  +H   +IH DLKP N+L  S   LK+ D+ + AR   +       P      +    
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL-ARIIDESAADNSEPTGQQSGM---- 179

Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
              +        V+TR YRAPEV+L    +S   D+WS GCIL EL     +F   +   
Sbjct: 180 -VEF--------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230

Query: 329 HLAMMERVLG-PIPQHMLKRVDKP-AEKFVR----RGRLDWPEGATSRESIKAVLKLPRL 382
            L ++  ++G P   + L+ ++ P A ++++           +              P  
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEK------------MFP-- 276

Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                  V+      IDLLQ +L +DP+ R+TA +AL+HP+ 
Sbjct: 277 ------RVNPKG---IDLLQRMLVFDPAKRITAKEALEHPYL 309

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  162 bits (411), Expect = 6e-45
 Identities = 77/354 (21%), Positives = 137/354 (38%), Gaps = 94/354 (26%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------------SIKKYRE 136
             +   Y  +RK+G G +G+VL C ++      AIKV++              +I+K+ E
Sbjct: 32  GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE 91

Query: 137 AAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFP 195
               EI +L+ L          +++ + F+ + +  +V E   G  L++ +   +   F 
Sbjct: 92  EIYNEISLLKSL-----DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FD 144

Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
                 I +Q+L  + ++H   ++H D+KPENIL  +                       
Sbjct: 145 ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN--------------------- 183

Query: 256 RLPKSSAIKVIDFG-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE 313
                  IK++DFG S+ +         + T +Y APEV+    ++  CD+WS G I+  
Sbjct: 184 ---SLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYI 239

Query: 314 LCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESI 373
           L  G   F                G   Q ++K+V+K    F      DW          
Sbjct: 240 LLCGYPPFG---------------GQNDQDIIKKVEKGKYYFDFN---DWK--------- 272

Query: 374 KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                          ++   A    +L++ +L YD + R TA +AL   +  + 
Sbjct: 273 ---------------NISDEA---KELIKLMLTYDYNKRCTAEEALNSRWIKKY 308

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  156 bits (398), Expect = 8e-45
 Identities = 76/346 (21%), Positives = 132/346 (38%), Gaps = 91/346 (26%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAM-TEIDVLELLK 149
            N+   +  +  +G G F +V     R TG+  A+K ++    +R++++  EI VL+ + 
Sbjct: 5   TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI- 63

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                    V + + ++   H  +V + + G  L+D + +     +       + +Q+L 
Sbjct: 64  ----KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV--YTEKDASLVIQQVLS 117

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V ++H+  ++H DLKPEN+L+++PE                        ++S I + DF
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPE------------------------ENSKIMITDF 153

Query: 269 G-STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELCSGEALFQTHEN 326
           G S   ++   +    T  Y APEV+    +S   D WS+G I  I LC G   F   E 
Sbjct: 154 GLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLC-GYPPFYE-ET 211

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD-----WPEGATSRESIKAVLKLPR 381
              L   E++                      G  +     W                  
Sbjct: 212 ESKL--FEKIK--------------------EGYYEFESPFWD----------------- 232

Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                   +  SA    D +  LL  DP+ R T   AL HP+   +
Sbjct: 233 -------DISESA---KDFICHLLEKDPNERYTCEKALSHPWIDGN 268

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  157 bits (398), Expect = 1e-44
 Identities = 78/343 (22%), Positives = 136/343 (39%), Gaps = 77/343 (22%)

Query: 92  NLTSRYKIL---RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELL 148
                Y +    + +GEG+F     C+ +++ +  A+K++   K+       EI  L+L 
Sbjct: 5   PFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIIS--KRMEANTQKEITALKLC 62

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           + +       V++   F  + H  +V E + G  L++ ++K  +  F       I R+L+
Sbjct: 63  EGHPN----IVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLV 116

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             V+ MHD+ ++H DLKPEN+LF                             +  IK+ID
Sbjct: 117 SAVSHMHDVGVVHRDLKPENLLFTDEN------------------------DNLEIKIID 152

Query: 268 FG-STAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG +               T HY APE++   G+   CD+WS+G IL  + SG+  FQ+H
Sbjct: 153 FGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
           +          +       ++K+        +++G   +   A                 
Sbjct: 213 D--------RSLTCTSAVEIMKK--------IKKGDFSFEGEAWK--------------- 241

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
               +V   A    DL+QGLL  DP+ RL       + +    
Sbjct: 242 ----NVSQEA---KDLIQGLLTVDPNKRLKMSGLRYNEWLQDG 277

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  156 bits (397), Expect = 2e-44
 Identities = 64/355 (18%), Positives = 112/355 (31%), Gaps = 68/355 (19%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLK 149
                + +   +G+G    V     ++TG+  AIKV    S  +  +  M E +VL+ L 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65

Query: 150 RYDRSGSRCVQIRNWFDYRN--HICIVFEML-GPSLYDFLRKN-NYRPFPVDLVREIGRQ 205
                    V++    +     H  ++ E     SLY  L +  N    P      + R 
Sbjct: 66  H-----KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           ++  +  + +  ++H ++KP NI+ V  E                          S  K+
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGE-----------------------DGQSVYKL 157

Query: 266 IDFGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYP--------CDMWSVGCILIEL 314
            DFG  A E ++    VS   T  Y  P++                  D+WS+G      
Sbjct: 158 TDFG-AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216

Query: 315 CSGEALFQTHENLEHLA-MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESI 373
            +G   F+  E       +M +++   P   +  V K        G +DW        S+
Sbjct: 217 ATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK-----AENGPIDWSGDMPVSCSL 271

Query: 374 KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
              L++                 L  +L  +L  D                    
Sbjct: 272 SRGLQVL----------------LTPVLANILEADQEKCWGFDQFFAETSDILHR 310

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  158 bits (401), Expect = 2e-44
 Identities = 90/342 (26%), Positives = 171/342 (50%), Gaps = 24/342 (7%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMT--EIDVLELL 148
           ++  +Y++++K+G+G +G V   +DR TGE VA+K +  + +   +A  T  EI +L  L
Sbjct: 6   HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTEL 65

Query: 149 KRYDRSGSRCVQIRNWF--DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
             ++      V + N    D    + +VF+ +   L+  +R N          + +  QL
Sbjct: 66  SGHE----NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQL 118

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           ++ + ++H   L+H D+KP NIL  +  ++K+ D+ + +RS       +R+  +  + + 
Sbjct: 119 IKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGL-SRS---FVNIRRVTNNIPLSIN 174

Query: 267 DFGSTAYEHQEH--NYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQT 323
           +      + Q    +Y V+TR YRAPE++LG   ++   DMWS+GCIL E+  G+ +F  
Sbjct: 175 ENTENFDDDQPILTDY-VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233

Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKP-AEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
              +  L  +  V+       ++ +  P A+  +   +       +++  I    K   L
Sbjct: 234 SSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLL 293

Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +       +  A   +DLL  LL+++P+ R++A+DALKHPF 
Sbjct: 294 KINPKADCNEEA---LDLLDKLLQFNPNKRISANDALKHPFV 332

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  157 bits (399), Expect = 2e-44
 Identities = 79/355 (22%), Positives = 127/355 (35%), Gaps = 101/355 (28%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-------REAAMTEIDV 144
                Y++   IG+G F  V  C++RETG+  A+K+V  + K+        E    E  +
Sbjct: 21  LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASI 79

Query: 145 LELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFL--RKNNYRPFPVDLVRE 201
             +LK         V++   +     + +VFE M G  L   +  R +    +   +   
Sbjct: 80  CHMLKH-----PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134

Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
             RQ+LE + + HD  +IH D+KP  +L  S E                         S+
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKE------------------------NSA 170

Query: 262 AIKVIDFGSTAY---EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELCSG 317
            +K+  FG               V T H+ APEV+    +  P D+W  G IL I L  G
Sbjct: 171 PVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS-G 229

Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD-----WPEGATSRES 372
              F          + E ++                    +G+       W         
Sbjct: 230 CLPFY-GTKER---LFEGII--------------------KGKYKMNPRQWS-------- 257

Query: 373 IKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                           H+  SA    DL++ +L  DP+ R+T ++AL HP+    
Sbjct: 258 ----------------HISESA---KDLVRRMLMLDPAERITVYEALNHPWLKER 293

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  156 bits (397), Expect = 3e-44
 Identities = 67/345 (19%), Positives = 124/345 (35%), Gaps = 101/345 (29%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLK--- 149
           +Y  L+KIGEG+FG+ +     E G    IK +   R   K RE +  E+ VL  +K   
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84

Query: 150 --RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
             +Y  S          F+    + IV +   G  L+  +       F  D + +   Q+
Sbjct: 85  IVQYRES----------FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI 134

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
              +  +HD +++H D+K +NI                            L K   +++ 
Sbjct: 135 CLALKHVHDRKILHRDIKSQNIF---------------------------LTKDGTVQLG 167

Query: 267 DFG-STAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
           DFG +             + T +Y +PE+     ++   D+W++GC+L ELC+ +  F+ 
Sbjct: 168 DFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227

Query: 324 HENLEHLAM--MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
             ++++L +  +     P+  H                         S +          
Sbjct: 228 -GSMKNLVLKIISGSFPPVSLHY------------------------SYD---------- 252

Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                          L  L+  L + +P  R + +  L+  F  +
Sbjct: 253 ---------------LRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  157 bits (399), Expect = 9e-44
 Identities = 65/355 (18%), Positives = 123/355 (34%), Gaps = 85/355 (23%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
           ++L +     + +G G+ G V+       G  VA+K +     + + A+ EI +L     
Sbjct: 11  QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRML--IDFCDIALMEIKLLTESDD 67

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE-----IGRQ 205
           +       ++          + I  E+   +L D +   N     + L +E     + RQ
Sbjct: 68  H----PNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +   VA +H L++IH DLKP+NIL  +                              I +
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR--------------ILI 169

Query: 266 IDFG-STAYEHQEHNYIVSTRH------YRAPEVILGLGW-------SYPCDMWSVGCIL 311
            DFG     +  + ++  +  +      +RAPE++            +   D++S+GC+ 
Sbjct: 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229

Query: 312 -IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSR 370
              L  G+  F                                           + +   
Sbjct: 230 YYILSKGKHPF-----------------------------------------GDKYSRES 248

Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
             I+ +  L  ++ L  + +   A    DL+  ++ +DP  R TA   L+HP F 
Sbjct: 249 NIIRGIFSLDEMKCLHDRSLIAEA---TDLISQMIDHDPLKRPTAMKVLRHPLFW 300

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  155 bits (394), Expect = 1e-43
 Identities = 69/363 (19%), Positives = 126/363 (34%), Gaps = 94/363 (25%)

Query: 77  RNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKK 133
           +   +   ++       +  Y +  ++G+G F  V  C+ + TG   A K++   +   +
Sbjct: 11  QQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR 70

Query: 134 YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYR 192
             +    E  +   L+         V++ +     +   +VF+ + G  L++ +    + 
Sbjct: 71  DFQKLEREARICRKLQH-----PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF- 124

Query: 193 PFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
            +         +Q+LE +A+ H   ++H +LKPEN+L  S                    
Sbjct: 125 -YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA------------------ 165

Query: 253 YYKRLPKSSAIKVIDFG-STAYEHQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
                 K +A+K+ DFG +      E  +    T  Y +PEV+    +S P D+W+ G I
Sbjct: 166 ------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI 219

Query: 311 L-IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD-----WP 364
           L I L  G   F   E+     +  ++                      G  D     W 
Sbjct: 220 LYILLV-GYPPFW-DED--QHRLYAQIK--------------------AGAYDYPSPEWD 255

Query: 365 EGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                                    V   A     L+  +L  +P  R+TA  ALK P+ 
Sbjct: 256 ------------------------TVTPEA---KSLIDSMLTVNPKKRITADQALKVPWI 288

Query: 425 TRD 427
              
Sbjct: 289 CNR 291

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  152 bits (387), Expect = 2e-43
 Identities = 75/349 (21%), Positives = 123/349 (35%), Gaps = 83/349 (23%)

Query: 83  GHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMT 140
           G         +   +   RK+G G FG V    +R +G    IK +     +   E    
Sbjct: 10  GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA 69

Query: 141 EIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFL--RKNNYRPFPVD 197
           EI+VL+ L          ++I   F+  +++ IV E   G  L + +   +   +     
Sbjct: 70  EIEVLKSL-----DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124

Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
            V E+ +Q++  +A+ H   ++H DLKPENILF                           
Sbjct: 125 YVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS----------------------- 161

Query: 258 PKSSAIKVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
              S IK+IDFG       + +      T  Y APEV      ++ CD+WS G ++  L 
Sbjct: 162 -PHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLL 219

Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA 375
           +G   F    +LE +                       +       ++            
Sbjct: 220 TGCLPFT-GTSLEEVQ----------------------QKATYKEPNYAVEC-------- 248

Query: 376 VLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                       + +   A   +DLL+ +L  DP  R +A   L H +F
Sbjct: 249 ------------RPLTPQA---VDLLKQMLTKDPERRPSAAQVLHHEWF 282

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  156 bits (397), Expect = 2e-43
 Identities = 84/357 (23%), Positives = 147/357 (41%), Gaps = 47/357 (13%)

Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIK 132
           ++   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK + R  +
Sbjct: 41  KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100

Query: 133 KYREAAMT--EIDVLELLKRYDRSGSRCVQI-RNWFDYRNHICIVFEMLGPSLYDFLRKN 189
               A     E+ +++ +   +      V   +   +    + +V E++  +L   ++  
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 159

Query: 190 NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
                  + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+ + AR+  
Sbjct: 160 ---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAG 215

Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC 309
                             F  T Y        V TR+YRAPEVILG+G+    D+WSVGC
Sbjct: 216 T----------------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGC 251

Query: 310 ILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATS 369
           I+ E+   + LF   + ++    +   LG      +K++      +V            +
Sbjct: 252 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN------RPKYA 305

Query: 370 RESIKAVLK--LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
             +   +    L    +   +     A    DLL  +L  DP+ R++  DAL+HP+ 
Sbjct: 306 GLTFPKLFPDSLFPADSEHNKLKASQA---RDLLSKMLVIDPAKRISVDDALQHPYI 359

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  152 bits (386), Expect = 2e-43
 Identities = 87/359 (24%), Positives = 134/359 (37%), Gaps = 95/359 (26%)

Query: 81  KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREA 137
             G            RY I+  +G+G+FG+VL C DR T +  A+KV+    +  K    
Sbjct: 8   SSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67

Query: 138 AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPV 196
            + E+++L+ L          +++    +  +   IV E+  G  L+D + K     F  
Sbjct: 68  ILREVELLKKL-----DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSE 120

Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
                I +Q+   + +MH   ++H DLKPENIL  S E                      
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE---------------------- 158

Query: 257 LPKSSAIKVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IE 313
             K   IK+IDFG +    Q       + T +Y APEV+ G  +   CD+WS G IL I 
Sbjct: 159 --KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYIL 215

Query: 314 LCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD-----WPEGAT 368
           L  G   F   +N   +                       K V  G+       W     
Sbjct: 216 LS-GTPPF-YGKNEYDIL----------------------KRVETGKYAFDLPQWR---- 247

Query: 369 SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                                +   A    DL++ +L + PS R+TA   L+HP+  + 
Sbjct: 248 --------------------TISDDA---KDLIRKMLTFHPSLRITATQCLEHPWIQKY 283

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  153 bits (388), Expect = 5e-43
 Identities = 83/344 (24%), Positives = 133/344 (38%), Gaps = 91/344 (26%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
           + L+  +++  ++G G    V  C  + T +  A+KV+      ++   TEI VL  L  
Sbjct: 49  DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL-KKTVDKKIVRTEIGVLLRLSH 107

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   ++++  F+    I +V E + G  L+D + +  Y  +      +  +Q+LE 
Sbjct: 108 -----PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQILEA 160

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           VA++H+  ++H DLKPEN+L+ +P                           + +K+ DFG
Sbjct: 161 VAYLHENGIVHRDLKPENLLYATPA------------------------PDAPLKIADFG 196

Query: 270 -STAYEHQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELCSGEALFQTHEN 326
            S   EHQ     +  T  Y APE++ G  +    DMWSVG I  I LC G   F     
Sbjct: 197 LSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC-GFEPFYDERG 255

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD-----WPEGATSRESIKAVLKLPR 381
            +   M  R+L                              W                  
Sbjct: 256 DQ--FMFRRIL--------------------NCEYYFISPWWD----------------- 276

Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                   V  +A    DL++ L+  DP  RLT   AL+HP+ T
Sbjct: 277 -------EVSLNA---KDLVRKLIVLDPKKRLTTFQALQHPWVT 310

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  153 bits (389), Expect = 6e-43
 Identities = 83/347 (23%), Positives = 137/347 (39%), Gaps = 67/347 (19%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT--EIDVLELLK 149
           ++  RY  L  IGEG +G V    D      VAIK +   +       T  EI +L   +
Sbjct: 24  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +  G   +      +    + IV +++   LY  L+         D +     Q+L  
Sbjct: 84  HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRG 140

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   ++H DLKP N+L                     +N       +  +K+ DFG
Sbjct: 141 LKYIHSANVLHRDLKPSNLL---------------------LN------TTCDLKICDFG 173

Query: 270 ---STAYEHQEHNYI---VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ 322
                  +H    ++   V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F 
Sbjct: 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKP-AEKFVR----RGRLDWPEGATSRESIKAVL 377
               L+ L  +  +LG   Q  L  +    A  ++     + ++ W              
Sbjct: 234 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR------------ 281

Query: 378 KLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
             P        + D  A   +DLL  +L ++P  R+    AL HP+ 
Sbjct: 282 LFP--------NADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYL 317

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  152 bits (386), Expect = 6e-43
 Identities = 71/361 (19%), Positives = 123/361 (34%), Gaps = 92/361 (25%)

Query: 92  NLTSRYKILRK-IGEGTFGQVLDCLDRETGETVAIKVV-RSIKKYREAAMTEIDVLELLK 149
                Y++    +GEG   +V  C++  T +  A+K++ +     R     E+++L    
Sbjct: 9   RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQC- 67

Query: 150 RYDRSGSRC-VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
                G R  +++  +F+  +   +VFE M G S+   + K  +  F       + + + 
Sbjct: 68  ----QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVA 121

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + F+H+  + H DLKPENIL   P                         + S +K+ D
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPN------------------------QVSPVKICD 157

Query: 268 FG----------STAYEHQEHNYIVSTRHYRAPEVILGLGWSY-----PCDMWSVGCIL- 311
           F            +     E      +  Y APEV+             CD+WS+G IL 
Sbjct: 158 FDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY 217

Query: 312 IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD-----WPEG 366
           I L  G   F      +               + +         ++ G+ +     W   
Sbjct: 218 ILLS-GYPPFVGRCGSDCGWDRGEACPACQNMLFES--------IQEGKYEFPDKDWA-- 266

Query: 367 ATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                                 H+  +A    DL+  LL  D   RL+A   L+HP+   
Sbjct: 267 ----------------------HISCAA---KDLISKLLVRDAKQRLSAAQVLQHPWVQG 301

Query: 427 D 427
            
Sbjct: 302 C 302

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  150 bits (382), Expect = 7e-43
 Identities = 73/349 (20%), Positives = 120/349 (34%), Gaps = 97/349 (27%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLE 146
            ++   Y +   IG G++G+V   + + T    A K    I KY     +    EI++++
Sbjct: 5   GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAK---KIPKYFVEDVDRFKQEIEIMK 61

Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQ 205
            L          +++   F+    I +V E+  G  L++ +       F       I + 
Sbjct: 62  SL-----DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKD 114

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +L  VA+ H L + H DLKPEN LF++                            S +K+
Sbjct: 115 VLSAVAYCHKLNVAHRDLKPENFLFLTDS------------------------PDSPLKL 150

Query: 266 IDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
           IDFG  A           V T +Y +P+V+ G  +   CD WS G ++  L  G   F  
Sbjct: 151 IDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSA 209

Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD-----WPEGATSRESIKAVLK 378
                 +                         +R G        W               
Sbjct: 210 -PTDSEVM----------------------LKIREGTFTFPEKDWL-------------- 232

Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                     +V   A     L++ LL   P  R+T+  AL+H +F + 
Sbjct: 233 ----------NVSPQA---ESLIRRLLTKSPKQRITSLQALEHEWFEKQ 268

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  150 bits (382), Expect = 1e-42
 Identities = 62/342 (18%), Positives = 116/342 (33%), Gaps = 71/342 (20%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELL 148
             T+ +  L KIG G FG V  C+ R  G   AIK  +   +     + A+ E+    +L
Sbjct: 8   RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNN--YRPFPVDLVREIGRQ 205
            ++       V+  + +   +H+ I  E   G SL D + +N      F    ++++  Q
Sbjct: 68  GQHS----HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 123

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +   + ++H + L+H D+KP NI F+S          +   +  + +           K+
Sbjct: 124 VGRGLRYIHSMSLVHMDIKPSNI-FISRT-------SIPNAASEEGDEDDWASNKVMFKI 175

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTH 324
            D G                 + A EV+          D++++   ++     E L +  
Sbjct: 176 GDLGHVT-RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG 234

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
           +    +      L  IPQ +                        S+E             
Sbjct: 235 DQWHEIRQGR--LPRIPQVL------------------------SQE------------- 255

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                         +LL+ ++  DP  R +A   +KH     
Sbjct: 256 ------------FTELLKVMIHPDPERRPSAMALVKHSVLLS 285

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  152 bits (385), Expect = 1e-42
 Identities = 81/348 (23%), Positives = 135/348 (38%), Gaps = 88/348 (25%)

Query: 91  ENLTSRYKILRK-IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
             +T  Y++ ++ +G G  G+VL+C  R TG+  A+K++    K R+    E+D      
Sbjct: 24  YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQA- 78

Query: 150 RYDRSGSRC---VQIRNWFD----YRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVRE 201
                 S     V I + ++     +  + I+ E M G  L+  +++   + F      E
Sbjct: 79  ------SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAE 132

Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
           I R +   + F+H   + H D+KPEN+L+ S E                        K +
Sbjct: 133 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKE------------------------KDA 168

Query: 262 AIKVIDFG-STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELCSGEA 319
            +K+ DFG +             T +Y APEV+    +   CDMWS+G I+ I LC G  
Sbjct: 169 VLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC-GFP 227

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F ++               I   M +R        +R G+  +P               
Sbjct: 228 PFYSNTGQA-----------ISPGMKRR--------IRLGQYGFPNP------------- 255

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                     V   A     L++ LL+ DP+ RLT    + HP+  + 
Sbjct: 256 ------EWSEVSEDA---KQLIRLLLKTDPTERLTITQFMNHPWINQS 294

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  152 bits (386), Expect = 2e-42
 Identities = 88/362 (24%), Positives = 150/362 (41%), Gaps = 57/362 (15%)

Query: 77  RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIK 132
           R+   +  Y   +G++   +  RY+ L+ IG G  G V    D      VAIK + R  +
Sbjct: 4   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63

Query: 133 KYREAAMT--EIDVLELLKRYDRSGSRCVQIRNWF------DYRNHICIVFEMLGPSLYD 184
               A     E+ +++ +   +      + + N F      +    + IV E++  +L  
Sbjct: 64  NQTHAKRAYRELVLMKCVNHKN-----IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 118

Query: 185 FLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
            ++         + +  +  Q+L  +  +H   +IH DLKP NI+  S   LKI D+ + 
Sbjct: 119 VIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL- 173

Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDM 304
           AR+                    F  T Y        V TR+YRAPEVILG+G+    D+
Sbjct: 174 ARTAGT----------------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDI 209

Query: 305 WSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP 364
           WSVGCI+ E+  G  LF   ++++    +   LG      +K++      +V        
Sbjct: 210 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN------ 263

Query: 365 EGATSRESIKAVLK--LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHP 422
               +  S + +    L    +   +     A    DLL  +L  D S R++  +AL+HP
Sbjct: 264 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQA---RDLLSKMLVIDASKRISVDEALQHP 320

Query: 423 FF 424
           + 
Sbjct: 321 YI 322

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  150 bits (380), Expect = 2e-42
 Identities = 68/348 (19%), Positives = 122/348 (35%), Gaps = 92/348 (26%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLEL 147
              +  Y +  ++G+G F  V  C+ + TG   A K++   +   +  +    E  +   
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61

Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           L+         V++ +     +   +VF+ + G  L++ +    +  +         +Q+
Sbjct: 62  LQH-----PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQI 114

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           LE +A+ H   ++H +LKPEN+L  S                          K +A+K+ 
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKA------------------------KGAAVKLA 150

Query: 267 DFG-STAYEHQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           DFG +      E  +    T  Y +PEV+    +S P D+W+ G IL  L  G   F   
Sbjct: 151 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF-WD 209

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD-----WPEGATSRESIKAVLKL 379
           E+                 +  ++        + G  D     W                
Sbjct: 210 ED--------------QHRLYAQI--------KAGAYDYPSPEWD--------------- 232

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                     V   A     L+  +L  +P  R+TA  ALK P+    
Sbjct: 233 ---------TVTPEA---KSLIDSMLTVNPKKRITADQALKVPWICNR 268

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  153 bits (390), Expect = 3e-42
 Identities = 74/351 (21%), Positives = 128/351 (36%), Gaps = 95/351 (27%)

Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY-REAAMTEIDVLE 146
               T  Y++  ++G+G F  V  C+    G+  A  ++  + +     +    E  +  
Sbjct: 6   CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR 65

Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
           LLK         V++ +      H  ++F+ + G  L++ +    Y  +         +Q
Sbjct: 66  LLKH-----PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQ 118

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +LE V   H + ++H +LKPEN+L  S                          K +A+K+
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKL------------------------KGAAVKL 154

Query: 266 IDFG-STAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELCSGEALF 321
            DFG +   E ++  +     T  Y +PEV+    +  P D+W+ G IL I L  G   F
Sbjct: 155 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV-GYPPF 213

Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD-----WPEGATSRESIKAV 376
              E+   L   +++                      G  D     W             
Sbjct: 214 W-DEDQHRL--YQQIK--------------------AGAYDFPSPEWD------------ 238

Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                        V   A    DL+  +L  +PS R+TA +ALKHP+ +  
Sbjct: 239 ------------TVTPEA---KDLINKMLTINPSKRITAAEALKHPWISHR 274

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  151 bits (384), Expect = 3e-42
 Identities = 86/341 (25%), Positives = 137/341 (40%), Gaps = 82/341 (24%)

Query: 91  ENLTSRYKILRK--IGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLEL 147
             + S Y + +   +G G FGQV  C +  TG  +A K++++   K +E    EI V+  
Sbjct: 83  GAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQ 142

Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           L       +  +Q+ + F+ +N I +V E + G  L+D +   +Y            +Q+
Sbjct: 143 LDH-----ANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN-LTELDTILFMKQI 196

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
            E +  MH + ++H DLKPENIL V+ +                         +  IK+I
Sbjct: 197 CEGIRHMHQMYILHLDLKPENILCVNRD-------------------------AKQIKII 231

Query: 267 DFG-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           DFG +  Y+ +E       T  + APEV+     S+P DMWSVG I   L SG + F   
Sbjct: 232 DFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF--- 288

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
                       LG      L  +           R D  +                   
Sbjct: 289 ------------LGDNDAETLNNI--------LACRWDLEDEE----------------- 311

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
              Q +   A    + +  LL  + S R++A +ALKHP+ +
Sbjct: 312 --FQDISEEA---KEFISKLLIKEKSWRISASEALKHPWLS 347

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  152 bits (387), Expect = 4e-42
 Identities = 83/356 (23%), Positives = 134/356 (37%), Gaps = 91/356 (25%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---------RSIKKYREAAMTE 141
           + L   Y + + +G G  G+V    +R+T + VAI+++                    TE
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190

Query: 142 IDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVR 200
           I++L+ L          ++I+N+FD      IV E M G  L+D +  N          +
Sbjct: 191 IEILKKLNH-----PCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR--LKEATCK 242

Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
               Q+L  V ++H+  +IH DLKPEN+L  S E                        + 
Sbjct: 243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------------------ED 278

Query: 261 SAIKVIDFG-STAYEHQEH-NYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELC 315
             IK+ DFG S           +  T  Y APEV++ +   G++   D WS+G IL    
Sbjct: 279 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 338

Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA 375
           SG   F  H                   +  +        +  G+ ++            
Sbjct: 339 SGYPPFSEHRT--------------QVSLKDQ--------ITSGKYNFIP---------- 366

Query: 376 VLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYRR 431
                     V   V   A   +DL++ LL  DP +R T  +AL+HP+   +  +R
Sbjct: 367 ---------EVWAEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  151 bits (383), Expect = 4e-42
 Identities = 74/350 (21%), Positives = 134/350 (38%), Gaps = 65/350 (18%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT----------- 140
            + S Y + R I  G++G V   +D   G  VAIK V +                     
Sbjct: 19  AMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVL 77

Query: 141 -EIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
            EI +L      +  G R + +       + + +V E++   L   +            +
Sbjct: 78  REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHI 136

Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
           +     +L  +  +H+  ++H DL P NIL                     +        
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNIL---------------------LA------D 169

Query: 260 SSAIKVIDFG---STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC 315
           ++ I + DF        +  + +Y V+ R YRAPE+++   G++   DMWS GC++ E+ 
Sbjct: 170 NNDITICDFNLAREDTADANKTHY-VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228

Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKP-AEKFVRRGRLDWPEGATSRESIK 374
           + +ALF+       L  +  V+G      +     P A  ++R    + P       +  
Sbjct: 229 NRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP-----ARAWT 283

Query: 375 AVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           AV+             D  A   +DL+  +L ++P  R++   AL+HP+F
Sbjct: 284 AVVP----------TADPVA---LDLIAKMLEFNPQRRISTEQALRHPYF 320

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  153 bits (388), Expect = 5e-42
 Identities = 78/377 (20%), Positives = 133/377 (35%), Gaps = 70/377 (18%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDV------L 145
            +  RY+I   IG G++G V +  D+     VA      IKK        ID       +
Sbjct: 50  QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVA------IKKILRVFEDLIDCKRILREI 103

Query: 146 ELLKR---------YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
            +L R          D      + I    +  + + +V E+         R         
Sbjct: 104 AILNRLNHDHVVKVLD------IVIPKDVEKFDELYVVLEIADSDFKKLFRTPV--YLTE 155

Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
             ++ +   LL  V ++H   ++H DLKP N L      +K+ D+ + AR+         
Sbjct: 156 LHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGL-ARTVDYPENGNS 214

Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYI----VSTRHYRAPEVILGL-GWSYPCDMWSVGCIL 311
               S  +      T    +         V TR YRAPE+IL    ++   D+WS+GCI 
Sbjct: 215 QLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIF 274

Query: 312 IELCS-----------GEALFQ-----THENLEHLAMMERVLGPIPQHMLKR----VDKP 351
            EL +              LF           +      +      +  L      +  P
Sbjct: 275 AELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTP 334

Query: 352 AEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ----NLVMQHVDHSAGYLIDLLQGLLRY 407
           +E+ +        E     ++ + +   P+ +              A   I LL+ +L +
Sbjct: 335 SEEDI--------EALEKEDAKRYIRIFPKREGTDLAERFPASSADA---IHLLKRMLVF 383

Query: 408 DPSSRLTAHDALKHPFF 424
           +P+ R+T ++ L HPFF
Sbjct: 384 NPNKRITINECLAHPFF 400

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  150 bits (380), Expect = 3e-41
 Identities = 83/355 (23%), Positives = 139/355 (39%), Gaps = 101/355 (28%)

Query: 91  ENLTSRYKIL-RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
             +   YK+  + +G G  G+VL   ++ T E  A+K+++   K R     E+   EL  
Sbjct: 57  NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EV---ELHW 109

Query: 150 RYDRSGSRC---VQIRNWFD----YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVRE 201
           R     S+C   V+I + ++     R  + IV E L G  L+  ++    + F      E
Sbjct: 110 RA----SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 165

Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
           I + + E + ++H + + H D+KPEN+L+ S                           ++
Sbjct: 166 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR------------------------PNA 201

Query: 262 AIKVIDFGSTAYEHQEHNY---IVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELCSG 317
            +K+ DFG  A E   HN       T +Y APEV+    +   CDMWS+G I+ I LC G
Sbjct: 202 ILKLTDFG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC-G 259

Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD-----WPEGATSRES 372
              F ++  L            I   M  R        +R G+ +     W         
Sbjct: 260 YPPFYSNHGL-----------AISPGMKTR--------IRMGQYEFPNPEWS-------- 292

Query: 373 IKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                            V         L++ LL+ +P+ R+T  + + HP+  + 
Sbjct: 293 ----------------EVSEEV---KMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  147 bits (374), Expect = 3e-41
 Identities = 67/345 (19%), Positives = 117/345 (33%), Gaps = 99/345 (28%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLELLK- 149
           + ++I +KIG G F +V        G  VA+K V+       K R   + EID+L+ L  
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 150 ----RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLR--KNNYRPFPVDLVREI 202
               +Y             F   N + IV E+     L   ++  K   R  P   V + 
Sbjct: 92  PNVIKY----------YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
             QL   +  MH  R++H D+KP N+                            +  +  
Sbjct: 142 FVQLCSALEHMHSRRVMHRDIKPANVF---------------------------ITATGV 174

Query: 263 IKVIDFG-STAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           +K+ D G    +  +    + +V T +Y +PE I   G+++  D+WS+GC+L E+ + ++
Sbjct: 175 VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS 234

Query: 320 LFQTHENLEHLAMMERVL-GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
            F   + +   ++ +++     P                      P    S E       
Sbjct: 235 PFYG-DKMNLYSLCKKIEQCDYPP--------------------LPSDHYSEE------- 266

Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                             L  L+   +  DP  R           
Sbjct: 267 ------------------LRQLVNMCINPDPEKRPDVTYVYDVAK 293

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  148 bits (375), Expect = 6e-41
 Identities = 86/354 (24%), Positives = 143/354 (40%), Gaps = 86/354 (24%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYREAAMTEID 143
            L   Y     +G G +G V   +D+ +GE VAIK         + + + YRE       
Sbjct: 21  ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRE------- 73

Query: 144 VLELLKRYDRSGSRCVQIRNWF------DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
            L LLK         + + + F             +V   +   L   +       F  +
Sbjct: 74  -LLLLKHMQHEN--VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL----KFSEE 126

Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
            ++ +  Q+L+ + ++H   ++H DLKP N+                      VN     
Sbjct: 127 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA---------------------VN----- 160

Query: 258 PKSSAIKVIDFG-STAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELC 315
            +   +K++DFG +   + +   Y V TR YRAPEVIL     +   D+WSVGCI+ E+ 
Sbjct: 161 -EDCELKILDFGLARHADAEMTGY-VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 218

Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKP-AEKFVR----RGRLDWPEGATSR 370
           +G+ LF+  + L+ L  + +V G      +++++   A+ +++      R D+ +     
Sbjct: 219 TGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ----- 273

Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                    P             A    DLL+ +L  D   RLTA  AL HPFF
Sbjct: 274 -------LFP--------RASPQA---ADLLEKMLELDVDKRLTAAQALTHPFF 309

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  148 bits (376), Expect = 8e-41
 Identities = 64/344 (18%), Positives = 111/344 (32%), Gaps = 68/344 (19%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDR 153
            + +   +G+G    V     ++TG+  AIKV    S  +  +  M E +VL+ L     
Sbjct: 10  LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH--- 66

Query: 154 SGSRCVQIRNWFDYRN--HICIVFEML-GPSLYDFLRKN-NYRPFPVDLVREIGRQLLEC 209
                V++    +     H  ++ E     SLY  L +  N    P      + R ++  
Sbjct: 67  --KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +  + +  ++H ++KP NI+ V  E                          S  K+ DFG
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGE-----------------------DGQSVYKLTDFG 161

Query: 270 STAYEHQEHNYIVS---TRHYRAPEVILGLGWSYP--------CDMWSVGCILIELCSGE 318
             A E ++    VS   T  Y  P++                  D+WS+G       +G 
Sbjct: 162 -AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

Query: 319 ALFQTHENLEHLA-MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
             F+  E       +M +++   P   +  V K        G +DW        S+   L
Sbjct: 221 LPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKA-----ENGPIDWSGDMPVSCSLSRGL 275

Query: 378 KLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH 421
           +                  L  +L  +L  D             
Sbjct: 276 Q----------------VLLTPVLANILEADQEKCWGFDQFFAE 303

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  147 bits (371), Expect = 2e-40
 Identities = 45/252 (17%), Positives = 96/252 (38%), Gaps = 34/252 (13%)

Query: 91  ENLTSRYKILRKIGEGTFGQV-----LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL 145
           +  +    +   +GEG F QV      D  D +  +   +KV +    +     T++  +
Sbjct: 61  QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQL--M 118

Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFL---RKNNYRPFPVDLVRE 201
           E LK   +     ++  +   ++N   +V E+    +L + +   +    +  P  LV  
Sbjct: 119 ERLKPSMQHM--FMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVIS 176

Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
              ++L  +  +HD  +IH D+KP+N +  +    +  +                   S+
Sbjct: 177 FAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDD----------------LSA 220

Query: 262 AIKVIDFG-STAYEHQEHNYIVS----TRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
            + +ID G S   +      I +    T  ++  E++    W+Y  D + V   +  +  
Sbjct: 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF 280

Query: 317 GEALFQTHENLE 328
           G  +   +E  E
Sbjct: 281 GTYMKVKNEGGE 292

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  147 bits (373), Expect = 5e-40
 Identities = 60/340 (17%), Positives = 112/340 (32%), Gaps = 86/340 (25%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
            +     +G G  G ++          VA+K +  + +    A  E+ +L     +    
Sbjct: 25  SFCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRI--LPECFSFADREVQLLRESDEH---- 77

Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              ++       R    I  E+   +L +++ + ++    ++    + +Q    +A +H 
Sbjct: 78  PNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PITLLQQTTSGLAHLHS 136

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STAYE 274
           L ++H DLKP NIL   P        K+                     + DFG      
Sbjct: 137 LNIVHRDLKPHNILISMPN----AHGKIK------------------AMISDFGLCKKLA 174

Query: 275 HQEHNY-----IVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIE-LCSGEALFQTHE 325
              H++     +  T  + APE++        +Y  D++S GC+    +  G   F    
Sbjct: 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG--- 231

Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
                               K + + A   +    LD                       
Sbjct: 232 --------------------KSLQRQANILLGACSLDCLHPE------------------ 253

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
             +H D  A    +L++ ++  DP  R +A   LKHPFF 
Sbjct: 254 --KHEDVIA---RELIEKMIAMDPQKRPSAKHVLKHPFFW 288

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  146 bits (370), Expect = 7e-40
 Identities = 76/370 (20%), Positives = 134/370 (36%), Gaps = 86/370 (23%)

Query: 95  SRYKILR-KIGEGTFGQVL--DCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
             ++    K+G GT+G V      D +  +  A+K +        +A  EI +L  LK  
Sbjct: 20  DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG-TGISMSACREIALLRELKH- 77

Query: 152 DRSGSRCVQIRNWFDYRNHICI--VFEMLGPSLYDFLR-------KNNYRPFPVDLVREI 202
                  + ++  F       +  +F+     L+  ++              P  +V+ +
Sbjct: 78  ----PNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSL 133

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
             Q+L+ + ++H   ++H DLKP NIL                            P+   
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPANIL-----------------------VMGEGPERGR 170

Query: 263 IKVIDFG--------STAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIE 313
           +K+ D G               +    V T  YRAPE++LG   ++   D+W++GCI  E
Sbjct: 171 VKIADMGFARLFNSPLKPLADLDPV--VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE 228

Query: 314 LCSGEALFQ---------THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP 364
           L + E +F             + + L  +  V+G            PA+K       DW 
Sbjct: 229 LLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGF-----------PADK-------DWE 270

Query: 365 E-------GATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHD 417
           +           ++  +       L   + +H          LLQ LL  DP  R+T+  
Sbjct: 271 DIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330

Query: 418 ALKHPFFTRD 427
           A++ P+F  D
Sbjct: 331 AMQDPYFLED 340

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  145 bits (368), Expect = 8e-40
 Identities = 85/344 (24%), Positives = 151/344 (43%), Gaps = 65/344 (18%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMT--EIDVLELL 148
            + + Y+ L+ +G G +G V   +D  TG  VAIK + R  +    A     E+ +L+ +
Sbjct: 22  EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM 81

Query: 149 KRYDRSGSRCVQI-RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           +  +  G   V       D      +V   +G  L   ++         D ++ +  Q+L
Sbjct: 82  RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQML 138

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           + + ++H   +IH DLKP N+                      VN      +   +K++D
Sbjct: 139 KGLRYIHAAGIIHRDLKPGNLA---------------------VN------EDCELKILD 171

Query: 268 FG-STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHE 325
           FG +   + +   Y V TR YRAPEVIL    ++   D+WSVGCI+ E+ +G+ LF+  +
Sbjct: 172 FGLARQADSEMTGY-VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 230

Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKP-AEKFVR----RGRLDWPEGATSRESIKAVLKLP 380
           +L+ L  + +V G  P   ++R+    A+ +++      + D+               L 
Sbjct: 231 HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS------------ILT 278

Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                   +    A   ++LL+ +L  D   R+TA +AL HP+F
Sbjct: 279 --------NASPLA---VNLLEKMLVLDAEQRVTAGEALAHPYF 311

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  143 bits (363), Expect = 8e-40
 Identities = 77/362 (21%), Positives = 121/362 (33%), Gaps = 109/362 (30%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV----------RSIKKYREAAMT 140
                 Y+    +G G    V  C+ + T +  A+K++            +++ REA + 
Sbjct: 13  HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72

Query: 141 EIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLV 199
           E+D+L  +  +       +Q+++ ++      +VF+ M    L+D+L +           
Sbjct: 73  EVDILRKVSGH----PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKET 126

Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
           R+I R LLE +  +H L ++H DLKPENIL                              
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLDD--------------------------- 159

Query: 260 SSAIKVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGL------GWSYPCDMWSVGCIL 311
              IK+ DFG +           +  T  Y APE+I         G+    DMWS G I+
Sbjct: 160 DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219

Query: 312 -IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD-----WPE 365
              L  G   F  H                   ML+         +  G        W  
Sbjct: 220 YTLLA-GSPPF-WHRK--------------QMLMLRM--------IMSGNYQFGSPEWD- 254

Query: 366 GATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                                      +     DL+   L   P  R TA +AL HPFF 
Sbjct: 255 -----------------------DYSDTV---KDLVSRFLVVQPQKRYTAEEALAHPFFQ 288

Query: 426 RD 427
           + 
Sbjct: 289 QY 290

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  143 bits (364), Expect = 1e-39
 Identities = 84/351 (23%), Positives = 134/351 (38%), Gaps = 93/351 (26%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---------RSIKKYREAAMTE 141
           + L   Y + + +G G  G+V    +R+T + VAIK++                    TE
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65

Query: 142 IDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVR 200
           I++L+ L          ++I+N+FD  ++  IV E M G  L+D +  N          +
Sbjct: 66  IEILKKLNH-----PCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKR--LKEATCK 117

Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
               Q+L  V ++H+  +IH DLKPEN+L  S E                        + 
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------------------ED 153

Query: 261 SAIKVIDFG-STAYEHQEH-NYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCIL-IEL 314
             IK+ DFG S           +  T  Y APEV++ +   G++   D WS+G IL I L
Sbjct: 154 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213

Query: 315 CSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIK 374
             G   F  H                   +  +        +  G+ ++           
Sbjct: 214 S-GYPPFSEHRT--------------QVSLKDQ--------ITSGKYNFIPE-------- 242

Query: 375 AVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                      V   V   A   +DL++ LL  DP +R T  +AL+HP+  
Sbjct: 243 -----------VWAEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQ 279

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  144 bits (365), Expect = 2e-39
 Identities = 84/354 (23%), Positives = 149/354 (42%), Gaps = 85/354 (24%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--------KKYREAAMTEID 143
            +  RY+ L  +G G +G V    D +TG  VA+K +           + YRE       
Sbjct: 26  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE------- 78

Query: 144 VLELLKRYDRSGSRCVQIRNWF------DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
            L LLK         + + + F      +  N + +V  ++G  L + ++         D
Sbjct: 79  -LRLLKHMKHEN--VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---D 132

Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
            V+ +  Q+L  + ++H   +IH DLKP N+                      VN     
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLA---------------------VN----- 166

Query: 258 PKSSAIKVIDFG-STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC 315
            +   +K++DFG +     +   Y V+TR YRAPE++L    ++   D+WSVGCI+ EL 
Sbjct: 167 -EDCELKILDFGLARHTADEMTGY-VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224

Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKP-AEKFVR----RGRLDWPEGATSR 370
           +G  LF   ++++ L ++ R++G     +LK++    A  +++      ++++       
Sbjct: 225 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN----- 279

Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                               +  A   +DLL+ +L  D   R+TA  AL H +F
Sbjct: 280 -------VFI--------GANPLA---VDLLEKMLVLDSDKRITAAQALAHAYF 315

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  144 bits (364), Expect = 2e-39
 Identities = 94/448 (20%), Positives = 148/448 (33%), Gaps = 116/448 (25%)

Query: 11  HSHMDRRPTKRPRLAWENPQAHSKAQ----SGMYCGQELGNLTSFGPSRVHADHASMFVK 66
           H H         +   E  +A  + +          +         PS+     A     
Sbjct: 2   HHHHHHSSGVDNKFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKL 61

Query: 67  GLAQNGTPQWRN----DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET 122
             AQ    +         +D    +A  +    +Y     IG G    V  C+ R TG  
Sbjct: 62  NDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHE 121

Query: 123 VAIKVV---------RSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI 173
            A+K++           +++ REA   E  +L  +  +       + + + ++  + + +
Sbjct: 122 FAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH----PHIITLIDSYESSSFMFL 177

Query: 174 VFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS 232
           VF+ M    L+D+L +           R I R LLE V+F+H   ++H DLKPENIL   
Sbjct: 178 VFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD 235

Query: 233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STAYEHQEH-NYIVSTRHYRAP 290
                                      +  I++ DFG S   E  E    +  T  Y AP
Sbjct: 236 ---------------------------NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAP 268

Query: 291 EVILGL------GWSYPCDMWSVGCIL-IELCSGEALFQTHENLEHLAMMERVLGPIPQH 343
           E++         G+    D+W+ G IL   L  G   F  H                   
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLA-GSPPF-WHRR--------------QIL 312

Query: 344 MLKRVDKPAEKFVRRGRLD-----WPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
           ML+         +  G+       W                             +     
Sbjct: 313 MLRM--------IMEGQYQFSSPEWD------------------------DRSSTV---K 337

Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           DL+  LL+ DP +RLTA  AL+HPFF R
Sbjct: 338 DLISRLLQVDPEARLTAEQALQHPFFER 365

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  141 bits (359), Expect = 2e-39
 Identities = 78/348 (22%), Positives = 128/348 (36%), Gaps = 105/348 (30%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY--REAAMTEIDVLELLKRY 151
           RY   R +G+G F +  +  D +T E  A K+V    + K   RE    EI +   L   
Sbjct: 16  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH- 74

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                  V    +F+  + + +V E+    SL +  ++   +       R   RQ++   
Sbjct: 75  ----QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGC 128

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
            ++H  R+IH DLK  N+                            L +   +K+ DFG 
Sbjct: 129 QYLHRNRVIHRDLKLGNLF---------------------------LNEDLEVKIGDFGL 161

Query: 270 STAYEHQEH---------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
           +T  E+            NYI       APEV+   G S+  D+WS+GCI+  L  G+  
Sbjct: 162 ATKVEYDGERKKVLCGTPNYI-------APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
           F+T   L              +    R        +++     P+               
Sbjct: 215 FET-SCL--------------KETYLR--------IKKNEYSIPK--------------- 236

Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                   H++  A     L+Q +L+ DP++R T ++ L   FFT  Y
Sbjct: 237 --------HINPVA---ASLIQKMLQTDPTARPTINELLNDEFFTSGY 273

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  141 bits (358), Expect = 3e-39
 Identities = 64/353 (18%), Positives = 112/353 (31%), Gaps = 108/353 (30%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLK--- 149
            Y++L  IG G++G+      +  G+ +  K +      +  ++  ++E+++L  LK   
Sbjct: 7   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66

Query: 150 --RYDRSGSRCVQIRNWFDYRN-HICIVFEML-GPSLYDFLR--KNNYRPFPVDLVREIG 203
             RY              D  N  + IV E   G  L   +       +    + V  + 
Sbjct: 67  IVRYYDR---------IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117

Query: 204 RQLLECVAFMHDLRL-----IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
            QL   +   H         +H DLKP N+                            L 
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVF---------------------------LD 150

Query: 259 KSSAIKVIDFG-STAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
               +K+ DFG +    H        V T +Y +PE +  + ++   D+WS+GC+L ELC
Sbjct: 151 GKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210

Query: 316 SGEALFQTHENLEHLAM--MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESI 373
           +    F    + + LA    E     IP                           S E  
Sbjct: 211 ALMPPFTA-FSQKELAGKIREGKFRRIPYRY------------------------SDE-- 243

Query: 374 KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                                  L +++  +L      R +  + L++P    
Sbjct: 244 -----------------------LNEIITRMLNLKDYHRPSVEEILENPLILE 273

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  144 bits (363), Expect = 3e-39
 Identities = 40/363 (11%), Positives = 90/363 (24%), Gaps = 99/363 (27%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--------IKKYREAAMTEIDVLEL 147
           + K++  +  G    V    D E  E  A+KV           +++  EA      +L  
Sbjct: 63  KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122

Query: 148 LKRYDRSGSRCVQIRNWFDYRNH-----------------ICIVFEMLGPSLYDFLRKNN 190
                R   R +   +    ++                    ++       L       +
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD 182

Query: 191 YR-----PFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA 245
           +         +  +  +  QL+   A +    L+H    P+N+                 
Sbjct: 183 FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLF---------------- 226

Query: 246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSY--PCD 303
                      +     + + D  +                Y   E +     ++    +
Sbjct: 227 -----------IMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALN 275

Query: 304 MWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW 363
            W +G  +  +      F                G +   +     +P+ +      L +
Sbjct: 276 AWQLGLSIYRVWCLFLPF----------------GLVTPGIKGSWKRPSLRVPGTDSLAF 319

Query: 364 PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                  + +K                         L+   L +D   RL   +A++ P 
Sbjct: 320 GSCTPLPDFVK------------------------TLIGRFLNFDRRRRLLPLEAMETPE 355

Query: 424 FTR 426
           F +
Sbjct: 356 FLQ 358

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  141 bits (357), Expect = 5e-39
 Identities = 66/343 (19%), Positives = 118/343 (34%), Gaps = 73/343 (21%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLK--- 149
           + ++ ++ +G G FG V +  ++      AIK +R  + +  RE  M E+  L  L+   
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 150 --RYDRS--GSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFP-VDLVREIG 203
             RY  +       +       + ++ I  ++    +L D++            +   I 
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124

Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            Q+ E V F+H   L+H DLKP NI F   + +K+ D+ +             + +    
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV----------TAMDQDEEE 174

Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
           +     +    +  H   V T+ Y +PE I G  +S+  D++S+G IL EL      F T
Sbjct: 175 Q--TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYP---FST 229

Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
                                           VR                    K P L 
Sbjct: 230 QMERVRTLTD----------------------VRNL------------------KFPPLF 249

Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                           ++Q +L   P  R  A + +++  F  
Sbjct: 250 TQKYPC-------EYVMVQDMLSPSPMERPEAINIIENAVFED 285

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  144 bits (364), Expect = 8e-39
 Identities = 83/358 (23%), Positives = 139/358 (38%), Gaps = 40/358 (11%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMT--EIDVLELL 148
           ++   Y I   IG G++G V    D+ T + VAIK V R  +   +      EI +L  L
Sbjct: 23  HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL 82

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
           K         + I +     + + IV E+    L    +         + ++ I   LL 
Sbjct: 83  KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI--FLTEEHIKTILYNLLL 140

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
              F+H+  +IH DLKP N L      +K+ D+ + AR+         +      +    
Sbjct: 141 GENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGL-ARTINSEKDTNIVNDLEENEEPGP 199

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSG---------- 317
            +   + Q  ++ V TR YRAPE+IL    ++   D+WS GCI  EL +           
Sbjct: 200 HNKNLKKQLTSH-VVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258

Query: 318 -EALFQ--THENLEHLAMMERVLGPIPQHMLKRV----DKPAEKFVRRGRLDWPEGATSR 370
              LF   +   L      ++V     +  L  +      P E  ++             
Sbjct: 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKN--------INKP 310

Query: 371 ESIKAVLKLPRLQ----NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           E IK +   P  +          +       I+LL+ +L+++P+ R+T   AL HP+ 
Sbjct: 311 EVIKYIKLFPHRKPINLKQKYPSISDDG---INLLESMLKFNPNKRITIDQALDHPYL 365

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  140 bits (355), Expect = 2e-38
 Identities = 78/348 (22%), Positives = 128/348 (36%), Gaps = 105/348 (30%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY--REAAMTEIDVLELLKRY 151
           RY   R +G+G F +  +  D +T E  A K+V    + K   RE    EI +   L   
Sbjct: 42  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH- 100

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                  V    +F+  + + +V E+    SL +  ++   +       R   RQ++   
Sbjct: 101 ----QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGC 154

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
            ++H  R+IH DLK  N+                            L +   +K+ DFG 
Sbjct: 155 QYLHRNRVIHRDLKLGNLF---------------------------LNEDLEVKIGDFGL 187

Query: 270 STAYEHQEH---------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
           +T  E+            NYI       APEV+   G S+  D+WS+GCI+  L  G+  
Sbjct: 188 ATKVEYDGERKKVLCGTPNYI-------APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
           F+T   L              +    R        +++     P+               
Sbjct: 241 FET-SCL--------------KETYLR--------IKKNEYSIPK--------------- 262

Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                   H++  A     L+Q +L+ DP++R T ++ L   FFT  Y
Sbjct: 263 --------HINPVA---ASLIQKMLQTDPTARPTINELLNDEFFTSGY 299

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  144 bits (364), Expect = 8e-38
 Identities = 66/342 (19%), Positives = 111/342 (32%), Gaps = 66/342 (19%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELL----- 148
            +++  ++G G FG VL  + ++TGE VAIK  R     K RE    EI +++ L     
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 149 -KRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKN-NYRPFPVDLVREIGRQ 205
               +                +   +  E   G  L  +L +  N        +R +   
Sbjct: 75  VSARE-----VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 129

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +   + ++H+ R+IH DLKPENI+                             +    K+
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQPGP------------------------QRLIHKI 165

Query: 266 IDFG-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
           ID G +   +  E     V T  Y APE++    ++   D WS G +  E  +G   F  
Sbjct: 166 IDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225

Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
           +                 +   K  +         G + +            VL  P   
Sbjct: 226 NWQPVQWHG---------KVREKSNEHIVVYDDLTGAVKFSS----------VLPTPNHL 266

Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
           + ++             LQ +L +    R T         F 
Sbjct: 267 SGILAGKLE------RWLQCMLMWHQRQRGTDPQNPNVGCFQ 302

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  136 bits (345), Expect = 2e-37
 Identities = 70/341 (20%), Positives = 129/341 (37%), Gaps = 90/341 (26%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYR--EAAMTEIDVLELLKRY 151
            +K+   +G+G+F  V       TG  VAIK++  +++ K    +    E+ +   LK  
Sbjct: 12  DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH- 70

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                  +++ N+F+  N++ +V EM     +  +L+    +PF  +  R    Q++  +
Sbjct: 71  ----PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGM 125

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
            ++H   ++H DL   N+L                           L ++  IK+ DFG 
Sbjct: 126 LYLHSHGILHRDLTLSNLL---------------------------LTRNMNIKIADFGL 158

Query: 270 STAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
           +T  +     H  +  T +Y +PE+          D+WS+GC+   L  G   F T + +
Sbjct: 159 ATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT-DTV 217

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
                         ++ L +        V     + P                       
Sbjct: 218 --------------KNTLNK--------VVLADYEMPS---------------------- 233

Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
             +   A    DL+  LLR +P+ RL+    L HPF +R+ 
Sbjct: 234 -FLSIEA---KDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  137 bits (347), Expect = 3e-37
 Identities = 63/356 (17%), Positives = 107/356 (30%), Gaps = 105/356 (29%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLK----- 149
            Y  ++K+GEG F  V        G   A+K +   ++  RE A  E D+  L       
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFL--RKNNYRPFPVDLVREIGRQL 206
           R       C++ R     ++   ++       +L++ +   K+       D +  +   +
Sbjct: 90  RLVAY---CLRERGA---KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI 143

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
              +  +H     H DLKP NIL                           L       ++
Sbjct: 144 CRGLEAIHAKGYAHRDLKPTNIL---------------------------LGDEGQPVLM 176

Query: 267 DFGS------------TAYEHQEHNYIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCIL 311
           D GS             A   Q+      T  YRAPE+             D+WS+GC+L
Sbjct: 177 DLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVL 236

Query: 312 IELCSGEALFQ-THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSR 370
             +  GE  +    +  + +A+                         + +L  P+     
Sbjct: 237 YAMMFGEGPYDMVFQKGDSVAL-----------------------AVQNQLSIPQSPR-- 271

Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                                HS+  L  LL  ++  DP  R      L      +
Sbjct: 272 ---------------------HSSA-LWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  136 bits (345), Expect = 3e-37
 Identities = 72/352 (20%), Positives = 128/352 (36%), Gaps = 116/352 (32%)

Query: 91  ENLTSRYKIL-RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
             +   YK+  + +G G  G+VL   ++ T E  A+K+++   K R     E+++     
Sbjct: 13  NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRA- 67

Query: 150 RYDRSGSRC---VQIRNWFD----YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVRE 201
                 S+C   V+I + ++     R  + IV E L G  L+  ++    + F      E
Sbjct: 68  ------SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 121

Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
           I + + E + ++H + + H D+KPEN+L+ S                           ++
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR------------------------PNA 157

Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELCSGEAL 320
            +K+ DFG                   A E   G  +   CDMWS+G I+ I LC G   
Sbjct: 158 ILKLTDFG------------------FAKET-TGEKYDKSCDMWSLGVIMYILLC-GYPP 197

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLD-----WPEGATSRESIKA 375
           F ++               I   M  R        +R G+ +     W            
Sbjct: 198 FYSNHG-----------LAISPGMKTR--------IRMGQYEFPNPEWS----------- 227

Query: 376 VLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                         V         L++ LL+ +P+ R+T  + + HP+  + 
Sbjct: 228 -------------EVSEEV---KMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  135 bits (342), Expect = 5e-37
 Identities = 67/343 (19%), Positives = 124/343 (36%), Gaps = 89/343 (25%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMT--EIDVLELLKR 150
             ++I R +G+G FG V    ++++   +A+KV+    ++K         E+++   L+ 
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   +++  +F     + ++ E     ++Y  L+K     F          +L   
Sbjct: 69  -----PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANA 121

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L                           L  +  +K+ DFG
Sbjct: 122 LSYCHSKRVIHRDIKPENLL---------------------------LGSAGELKIADFG 154

Query: 270 -STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
            S          +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +    
Sbjct: 155 WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--- 211

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
                        Q   KR        + R    +P+                       
Sbjct: 212 ------------YQETYKR--------ISRVEFTFPD----------------------- 228

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYRR 431
            V   A    DL+  LL+++PS R    + L+HP+ T +  + 
Sbjct: 229 FVTEGA---RDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  134 bits (340), Expect = 2e-36
 Identities = 80/390 (20%), Positives = 132/390 (33%), Gaps = 103/390 (26%)

Query: 52  GPSRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQV 111
           G S  H  H+S  V   +        +  K         E L S+Y++   +G G FG V
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMAPCNDLHATKLAPG--KEKEPLESQYQVGPLLGSGGFGSV 59

Query: 112 LDCLDRETGETVAIKVV--RSIKKYREAAMT-----EIDVLELLKRYDRSGSRCVQIRNW 164
              +       VAIK V    I  + E         E+ +L+ +          +++ +W
Sbjct: 60  YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG---VIRLLDW 116

Query: 165 FDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTD 222
           F+  +   ++ E   P   L+DF+ +        +L R    Q+LE V   H+  ++H D
Sbjct: 117 FERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRD 174

Query: 223 LKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-NYI 281
           +K ENIL                    D+N  +       +K+IDFGS A          
Sbjct: 175 IKDENILI-------------------DLNRGE-------LKLIDFGSGALLKDTVYTDF 208

Query: 282 VSTRHYRAPEVILGLGWSY---PCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
             TR Y  PE I      Y      +WS+G +L ++  G+  F+                
Sbjct: 209 DGTRVYSPPEWIRYHR--YHGRSAAVWSLGILLYDMVCGDIPFEH--------------- 251

Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
                         ++ + RG++ + +   S E                           
Sbjct: 252 --------------DEEIIRGQVFFRQRV-SSEC-------------------------Q 271

Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            L++  L   PS R T  +   HP+     
Sbjct: 272 HLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  134 bits (338), Expect = 7e-36
 Identities = 58/344 (16%), Positives = 100/344 (29%), Gaps = 102/344 (29%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK---- 149
                   ++G G+FG+V    D++TG   A+K VR         + E+     L     
Sbjct: 57  VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVACAGLSSPRI 112

Query: 150 -RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
                 G+              + I  E + G SL   +++      P D       Q L
Sbjct: 113 VPL--YGA--------VREGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQAL 160

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           E + ++H  R++H D+K +N+L                               S   + D
Sbjct: 161 EGLEYLHTRRILHGDVKADNVL-------------------LS-------SDGSRAALCD 194

Query: 268 FG--------STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           FG                 +YI  T  + APEV++G       D+WS  C+++ + +G  
Sbjct: 195 FGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC- 253

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
                       +  +    I          P          + P               
Sbjct: 254 --HPWTQYFRGPLCLK----IASE-----PPP--------IREIPPSCAPL--------- 285

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                +Q  LR +P  R +A +  +   
Sbjct: 286 -----------------TAQAIQEGLRKEPVHRASAMELRRKVG 312

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  131 bits (331), Expect = 4e-35
 Identities = 68/354 (19%), Positives = 119/354 (33%), Gaps = 105/354 (29%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMT-----EID 143
           E   + Y++   +G+G FG V           VAIKV+    +  +   + +     E+ 
Sbjct: 27  EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86

Query: 144 VLELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDL 198
           +L  +     +G      +++ +WF+ +    +V E   P+  L+D++ +    P     
Sbjct: 87  LLWKV----GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGP 140

Query: 199 VREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
            R    Q++  +   H   ++H D+K ENIL          D                  
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILI---------D-----------------L 174

Query: 259 KSSAIKVIDFGSTAYEHQEH-NYIVSTRHYRAPEVILGLGWSY---PCDMWSVGCILIEL 314
           +    K+IDFGS A  H E       TR Y  PE I      Y   P  +WS+G +L ++
Sbjct: 175 RRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQ--YHALPATVWSLGILLYDM 232

Query: 315 CSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIK 374
             G+  F+                              ++ +    L +P    S +   
Sbjct: 233 VCGDIPFER-----------------------------DQEILEAELHFPAH-VSPDC-- 260

Query: 375 AVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                                    L++  L   PSSR +  + L  P+     
Sbjct: 261 -----------------------CALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  132 bits (333), Expect = 5e-35
 Identities = 63/369 (17%), Positives = 122/369 (33%), Gaps = 98/369 (26%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMT------------- 140
            Y+I+R + +G F +++  L  +  +  A+K      ++K R+   +             
Sbjct: 32  DYRIIRTLNQGKFNKII--LCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89

Query: 141 ---EIDVLELLKRYDRSGSR---CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNY-- 191
              E+ ++  +        +   C+         + + I++E M   S+  F        
Sbjct: 90  FKNELQIITDI--------KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLD 141

Query: 192 ----RPFPVDLVREIGRQLLECVAFMHDLRLI-HTDLKPENILFVSPEYLKIPDYKVTAR 246
                  P+ +++ I + +L   +++H+ + I H D+KP NIL                 
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---------------- 185

Query: 247 SPTDVNYYKRLPKSSAIKVIDFG-STAYEHQEHNYIVSTRHYRAPEVILGLGWSY--PCD 303
              D N          +K+ DFG S     ++      T  +  PE             D
Sbjct: 186 ---DKNGR--------VKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVD 234

Query: 304 MWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW 363
           +WS+G  L  +      F    +L                +           +R   +++
Sbjct: 235 IWSLGICLYVMFYNVVPFSLKISL--------------VELFNN--------IRTKNIEY 272

Query: 364 PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
           P             K     N     + +     ID L+  LR +P+ R+T+ DALKH +
Sbjct: 273 PLDRNHFLYPLTNKKSTCSNN----FLSNED---IDFLKLFLRKNPAERITSEDALKHEW 325

Query: 424 FTRDYYRRF 432
                    
Sbjct: 326 LADTNIEDL 334

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  129 bits (327), Expect = 9e-35
 Identities = 69/364 (18%), Positives = 133/364 (36%), Gaps = 94/364 (25%)

Query: 77  RNDDKDGHYLFALGENLTSRY-KILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIK 132
           + DD +     A+G +   R+ K   +IG G+F  V   LD ET   VA   ++     K
Sbjct: 7   QQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK 66

Query: 133 KYREAAMTEIDVLELLK-----RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFL 186
             R+    E ++L+ L+     R+  S        +    +  I +V E M   +L  +L
Sbjct: 67  SERQRFKEEAEMLKGLQHPNIVRFYDS------WESTVKGKKCIVLVTELMTSGTLKTYL 120

Query: 187 RKNNYRPFPVDLVREIGRQLLECVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
           ++  ++   + ++R   RQ+L+ + F+H     +IH DLK +NI              +T
Sbjct: 121 KR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIF-------------IT 165

Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY-IVSTRHYRAPEVILGLGWSYPCD 303
                          + ++K+ D G    +       ++ T  + APE+     +    D
Sbjct: 166 G-------------PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVD 211

Query: 304 MWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW 363
           +++ G  ++E+ + E  +   +N     +  RV   +      +V  P  K         
Sbjct: 212 VYAFGMCMLEMATSEYPYSECQNAA--QIYRRVTSGVKPASFDKVAIPEVK--------- 260

Query: 364 PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                              ++++G +R +   R +  D L H F
Sbjct: 261 -----------------------------------EIIEGCIRQNKDERYSIKDLLNHAF 285

Query: 424 FTRD 427
           F  +
Sbjct: 286 FQEE 289

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  127 bits (321), Expect = 6e-34
 Identities = 68/340 (20%), Positives = 114/340 (33%), Gaps = 89/340 (26%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMT--EIDVLELLKR 150
             + I R +G+G FG V    +++    +A+KV+    ++K         EI++   L+ 
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   +++ N+F  R  I ++ E      LY  L+K+    F          +L + 
Sbjct: 74  -----PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADA 126

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + + H+ ++IH D+KPEN+L      LKI                            DFG
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKI---------------------------ADFG 159

Query: 270 -STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
            S          +  T  Y  PE+I G       D+W  G +  E   G   F +     
Sbjct: 160 WSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP---S 216

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
           H     R++                       L +P                        
Sbjct: 217 HTETHRRIV--------------------NVDLKFPP----------------------- 233

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            +   +    DL+  LLRY P  RL     ++HP+   + 
Sbjct: 234 FLSDGS---KDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  128 bits (324), Expect = 9e-34
 Identities = 48/373 (12%), Positives = 101/373 (27%), Gaps = 123/373 (32%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT----EIDVLELLKRY 151
                  +G+      L+  D+ETGE+  + V    ++    A+     E+  L LL+  
Sbjct: 74  TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133

Query: 152 DRSGS--------------RCVQIRNWFDYRNH--------ICIVFEMLGPSLYDFL--- 186
                              +  Q +     R             ++  +  +L  F    
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 193

Query: 187 --RKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
               + ++        ++  Q++  +A +H   L+HT L+P +I+               
Sbjct: 194 LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIV--------------- 238

Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW------ 298
                       L +   + +  F               +R +  PE+            
Sbjct: 239 ------------LDQRGGVFLTGFEH-LVRDGARVVSSVSRGFEPPELEARRATISYHRD 285

Query: 299 -----SYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAE 353
                ++  D W++G ++  +   +    T +        E +                 
Sbjct: 286 RRTLMTFSFDAWALGLVIYWIWCADLPI-TKDAALG--GSEWIF---------------- 326

Query: 354 KFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRL 413
               R   + P+                                  LL+G LRY    RL
Sbjct: 327 ----RSCKNIPQPV------------------------------RALLEGFLRYPKEDRL 352

Query: 414 TAHDALKHPFFTR 426
               A++ P + +
Sbjct: 353 LPLQAMETPEYEQ 365

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  125 bits (315), Expect = 5e-33
 Identities = 76/360 (21%), Positives = 125/360 (34%), Gaps = 97/360 (26%)

Query: 78  NDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYRE 136
            ++ D        +           +G+GT+G V    D      +AIK +     +Y +
Sbjct: 5   TEEGDCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ 64

Query: 137 AAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFP 195
               EI + + LK         VQ    F     I I  E + G SL   L ++ + P  
Sbjct: 65  PLHEEIALHKHLKH-----KNIVQYLGSFSENGFIKIFMEQVPGGSLSALL-RSKWGPLK 118

Query: 196 VD--LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY 253
            +   +    +Q+LE + ++HD +++H D+K +N+L                     +N 
Sbjct: 119 DNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVL---------------------IN- 156

Query: 254 YKRLPKSSAIKVIDFGS---TAYEHQEHNYIVSTRHYRAPEVILGL--GWSYPCDMWSVG 308
                 S  +K+ DFG+    A  +        T  Y APE+I     G+    D+WS+G
Sbjct: 157 ----TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLG 212

Query: 309 CILIELCSGEALFQTHENLEHLAMMERVLG-----PIPQHMLKRVDKPAEKFVRRGRLDW 363
           C +IE+ +G+  F  +E  E  A M +V        IP+ M       A+ F+ +     
Sbjct: 213 CTIIEMATGKPPF--YELGEPQAAMFKVGMFKVHPEIPESM----SAEAKAFILK----- 261

Query: 364 PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                                       DP  R  A+D L   F
Sbjct: 262 ----------------------------------------CFEPDPDKRACANDLLVDEF 281

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  126 bits (317), Expect = 5e-33
 Identities = 69/357 (19%), Positives = 115/357 (32%), Gaps = 110/357 (30%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMTEIDVLELLKR---- 150
           R ++ R + EG F  V +  D  +G   A+K ++ + ++   A + E+  ++ L      
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88

Query: 151 ---YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYR-PFPVDLVREIGRQL 206
                   +  +        +    ++ E+    L +FL+K   R P   D V +I  Q 
Sbjct: 89  VQFCS---AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQT 145

Query: 207 LECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
              V  MH  +  +IH DLK EN+L                           L     IK
Sbjct: 146 CRAVQHMHRQKPPIIHRDLKVENLL---------------------------LSNQGTIK 178

Query: 265 VIDFGSTAYEHQEHNYIVS-----------TRH----YRAPEVILGLGWSY---PCDMWS 306
           + DFGS        +Y  S           TR+    YR PE+I            D+W+
Sbjct: 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWA 238

Query: 307 VGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEG 366
           +GCIL  LC  +  F+    L                            +  G+   P  
Sbjct: 239 LGCILYLLCFRQHPFEDGAKLR---------------------------IVNGKYSIP-- 269

Query: 367 ATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                                 H          L++ +L+ +P  RL+  + +    
Sbjct: 270 ---------------------PHDTQYTV-FHSLIRAMLQVNPEERLSIAEVVHQLQ 304

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  120 bits (302), Expect = 6e-31
 Identities = 71/387 (18%), Positives = 124/387 (32%), Gaps = 118/387 (30%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLK--- 149
           + ++ ++ +G G FG V +  ++      AIK +R  + +  RE  M E+  L  L+   
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 150 ---------RYDRSGSRCVQIRNWFDYRNHIC---------------------------- 172
                           +      W    +                               
Sbjct: 66  IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125

Query: 173 ------------IVFEML-GPSLYDFLRKNNYRPFP-VDLVREIGRQLLECVAFMHDLRL 218
                       I  ++    +L D++ +          +   I  Q+ E V F+H   L
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGL 185

Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
           +H DLKP NI F   + +K+ D+ +   +       + +            +    +  H
Sbjct: 186 MHRDLKPSNIFFTMDDVVKVGDFGL-VTAMDQDEEEQTVL-----------TPMPAYATH 233

Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
              V T+ Y +PE I G  +S+  D++S+G IL EL      F T         MERV  
Sbjct: 234 TGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQ--------MERV-- 280

Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
                ++          VR  +   P   T         K P+   +V            
Sbjct: 281 ----RIITD--------VRNLKF--PLLFTQ--------KYPQEHMMVQD---------- 308

Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFT 425
                +L   P+ R  A D +++  F 
Sbjct: 309 -----MLSPSPTERPEATDIIENAIFE 330

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  118 bits (298), Expect = 4e-30
 Identities = 69/343 (20%), Positives = 118/343 (34%), Gaps = 60/343 (17%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRS 154
           ++ + ++G G  G V     + +G  +A K++        R   + E+ VL         
Sbjct: 35  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL--------H 86

Query: 155 GSRCVQIRNW---FDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                 I  +   F     I I  E M G SL   L+K      P  ++ ++   +++ +
Sbjct: 87  ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 144

Query: 211 AFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
            ++ +  +++H D+KP NIL                           +     IK+ DFG
Sbjct: 145 TYLREKHKIMHRDVKPSNIL---------------------------VNSRGEIKLCDFG 177

Query: 270 -STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
            S        N  V TR Y +PE + G  +S   D+WS+G  L+E+  G       +  E
Sbjct: 178 VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
              M    +         R   P     + G    P          A+ +L  L  +V +
Sbjct: 238 LELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPP--------MAIFEL--LDYIVNE 287

Query: 389 HVDHSAGY-----LIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                          D +   L  +P+ R      + H F  R
Sbjct: 288 PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  116 bits (293), Expect = 1e-29
 Identities = 71/347 (20%), Positives = 123/347 (35%), Gaps = 103/347 (29%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT---------EIDVLE 146
           +Y  +  +G G FG V   +D+E  + V +K ++  K   +  +          EI +L 
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREIGR 204
            ++      +  +++ + F+ +    +V E  G    L+ F+ ++        L   I R
Sbjct: 85  RVEH-----ANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFR 137

Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
           QL+  V ++    +IH D+K ENI+                           + +   IK
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENIV---------------------------IAEDFTIK 170

Query: 265 VIDFGSTAYEHQEHNYIVS--TRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALF 321
           +IDFGS AY  +   +     T  Y APEV++G  +  P  +MWS+G  L  L   E  F
Sbjct: 171 LIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230

Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
                                                            E+++A +  P 
Sbjct: 231 CEL---------------------------------------------EETVEAAIHPPY 245

Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                   V       + L+ GLL+  P  R T    +  P+ T+  
Sbjct: 246 -------LVSKEL---MSLVSGLLQPVPERRTTLEKLVTDPWVTQPV 282

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  114 bits (287), Expect = 6e-29
 Identities = 73/341 (21%), Positives = 121/341 (35%), Gaps = 92/341 (26%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
              + +L K+GEG++G V   + +ETG+ VAIK V  ++   +  + EI ++        
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIM-------- 78

Query: 154 SGSRCVQIRNWFD---YRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                  +  ++        + IV E     S+ D +R  N +    D +  I +  L+ 
Sbjct: 79  QQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKG 137

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H +R IH D+K  NIL                           L      K+ DFG
Sbjct: 138 LEYLHFMRKIHRDIKAGNIL---------------------------LNTEGHAKLADFG 170

Query: 270 STA---YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA-LFQTHE 325
                     + N ++ T  + APEVI  +G++   D+WS+G   IE+  G+      H 
Sbjct: 171 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH- 229

Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
                 M  R +  IP         P                            P  +  
Sbjct: 230 -----PM--RAIFMIPT-------NPP---------------------------PTFRK- 247

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                +  +    D ++  L   P  R TA   L+HPF   
Sbjct: 248 ----PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  113 bits (286), Expect = 8e-29
 Identities = 83/348 (23%), Positives = 128/348 (36%), Gaps = 101/348 (29%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELL 148
            +    +  L KIG+G+FG+V   +D  T + VAIK++     +   E    EI VL   
Sbjct: 18  ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77

Query: 149 K-----RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
                 +Y   GS        +     + I+ E + G S  D L      P     +  I
Sbjct: 78  DSPYVTKY--YGS--------YLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATI 124

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            R++L+ + ++H  + IH D+K  N+L                           L +   
Sbjct: 125 LREILKGLDYLHSEKKIHRDIKAANVL---------------------------LSEHGE 157

Query: 263 IKVIDFGSTA---YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
           +K+ DFG          + N  V T  + APEVI    +    D+WS+G   IEL  GE 
Sbjct: 158 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 217

Query: 320 -LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
              + H       M  +VL  IP++       P                           
Sbjct: 218 PHSELH------PM--KVLFLIPKN------NP--------------------------- 236

Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
            P L+       ++S   L + ++  L  +PS R TA + LKH F  R
Sbjct: 237 -PTLEG------NYSK-PLKEFVEACLNKEPSFRPTAKELLKHKFILR 276

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  113 bits (285), Expect = 9e-29
 Identities = 74/345 (21%), Positives = 127/345 (36%), Gaps = 94/345 (27%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLK 149
            +   +Y    KIG+G  G V   +D  TG+ VAI+ +   ++ + E  + EI V+    
Sbjct: 16  GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM---- 71

Query: 150 RYDRSGSRCVQIRNWFD---YRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                 ++   I N+ D     + + +V E + G SL D + +          +  + R+
Sbjct: 72  ----RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRE 124

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
            L+ + F+H  ++IH D+K +NIL                           L    ++K+
Sbjct: 125 CLQALEFLHSNQVIHRDIKSDNIL---------------------------LGMDGSVKL 157

Query: 266 IDFGSTA---YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA-LF 321
            DFG  A    E  + + +V T ++ APEV+    +    D+WS+G + IE+  GE    
Sbjct: 158 TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217

Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
             +       +  R L  I  +                                    P 
Sbjct: 218 NEN------PL--RALYLIATN----------------------------------GTPE 235

Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           LQN      +  +    D L   L  D   R +A + L+H F   
Sbjct: 236 LQN-----PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI 275

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  115 bits (289), Expect = 1e-28
 Identities = 47/379 (12%), Positives = 103/379 (27%), Gaps = 127/379 (33%)

Query: 93  LTSRYKIL---RKIGEGTFGQVLDCLDRETGETVAIKVVRS--------IKKYREAA--- 138
           L  R + L     +G+      L+  D+ETGE+  + V           IK+ +E     
Sbjct: 73  LGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRL 132

Query: 139 ------------------MTEIDVLELLKRYD----RSGSRCVQIRNWFDYRNHICIVFE 176
                             +   D+++  ++      R   R + + + F     +    +
Sbjct: 133 RLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQ 192

Query: 177 MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYL 236
             G  L      +  +        ++  Q++  +A +H   L+HT L+P +I+       
Sbjct: 193 TFGEVLLSHSSTH--KSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIV------- 243

Query: 237 KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ----EHNYIVSTRHYRAPEV 292
                               L +   + +  F     +            +     A  +
Sbjct: 244 --------------------LDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERM 283

Query: 293 ILGLG-----WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKR 347
           +          ++  D W++G  +  +   +                           + 
Sbjct: 284 LPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNT---------------DDAALGGSEW 328

Query: 348 VDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY 407
                   + R   + P+                               +  LL+G LRY
Sbjct: 329 --------IFRSCKNIPQ------------------------------PVRALLEGFLRY 350

Query: 408 DPSSRLTAHDALKHPFFTR 426
               RL    A++ P + +
Sbjct: 351 PKEDRLLPLQAMETPEYEQ 369

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  115 bits (289), Expect = 1e-28
 Identities = 59/356 (16%), Positives = 114/356 (32%), Gaps = 63/356 (17%)

Query: 94  TSRYKILRKIGEG--TFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELL 148
              Y++L  IG+G      V     + TGE V ++ +       +       E+ V +L 
Sbjct: 24  GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83

Query: 149 K-----RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
                  Y  +          F   N + +V   M   S  D +  +         +  I
Sbjct: 84  NHPNIVPYRAT----------FIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI 133

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            + +L+ + ++H +  +H  +K  +IL                           +     
Sbjct: 134 LQGVLKALDYIHHMGYVHRSVKASHIL---------------------------ISVDGK 166

Query: 263 IKVIDFGSTA----------YEHQEHNYIVSTRHYRAPEVI--LGLGWSYPCDMWSVGCI 310
           + +    S              H    Y V    + +PEV+     G+    D++SVG  
Sbjct: 167 VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGIT 226

Query: 311 LIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSR 370
             EL +G   F+     +   ++E++ G +P  +        E  +   R     G +  
Sbjct: 227 ACELANGHVPFKDMPATQ--MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDS 284

Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
            +                H   S  +    ++  L+ +P +R +A   L H FF +
Sbjct: 285 LTTSTPRPSNGDSPSHPYHRTFSP-HFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 339

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  112 bits (283), Expect = 2e-28
 Identities = 59/363 (16%), Positives = 119/363 (32%), Gaps = 110/363 (30%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDR 153
           +Y +  +IG+G++G V    +       A+KV+  + + +                    
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73

Query: 154 SGSRCV--QIRN-------------------WFDY-RNHICIVFEML-GPSLYDFLRKNN 190
              R    Q+                       D   +H+ +VFE++    + +      
Sbjct: 74  IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK- 132

Query: 191 YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
             P   D  R   + L++ + ++H  ++IH D+KP N+L                     
Sbjct: 133 --PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL--------------------- 169

Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTR----HYRAPEVILGLGWSY---PCD 303
                 + +   IK+ DFG +  E +  + ++S       + APE +      +     D
Sbjct: 170 ------VGEDGHIKIADFGVSN-EFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALD 222

Query: 304 MWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW 363
           +W++G  L     G+  F   E +                +  +        ++   L++
Sbjct: 223 VWAMGVTLYCFVFGQCPFM-DERI--------------MCLHSK--------IKSQALEF 259

Query: 364 PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
           P+                         D +   L DL+  +L  +P SR+   +   HP+
Sbjct: 260 PD-----------------------QPDIAED-LKDLITRMLDKNPESRIVVPEIKLHPW 295

Query: 424 FTR 426
            TR
Sbjct: 296 VTR 298

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  112 bits (282), Expect = 4e-28
 Identities = 68/344 (19%), Positives = 128/344 (37%), Gaps = 92/344 (26%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLK 149
            +         KIGEG+ G V    ++ +G  VA+K++   K+ R E    E+ ++    
Sbjct: 41  GDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIM---- 96

Query: 150 RYDRSGSRCVQIRNWFD---YRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                  +   +   +        + ++ E + G +L D + +        + +  +   
Sbjct: 97  ----RDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEA 149

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +L+ +A++H   +IH D+K ++IL                           L     +K+
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSIL---------------------------LTLDGRVKL 182

Query: 266 IDFGSTA---YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
            DFG  A    +  +   +V T ++ APEVI    ++   D+WS+G ++IE+  GE    
Sbjct: 183 SDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP--- 239

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
            + +   +    + +  +        D P                            P+L
Sbjct: 240 PYFSDSPV----QAMKRLR-------DSPP---------------------------PKL 261

Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           +N        S   L D L+ +L  DP  R TA + L HPF  +
Sbjct: 262 KN----SHKVSP-VLRDFLERMLVRDPQERATAQELLDHPFLLQ 300

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  112 bits (282), Expect = 5e-28
 Identities = 76/347 (21%), Positives = 120/347 (34%), Gaps = 96/347 (27%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV----RSIKKYREAAMTEIDVLE 146
           ++    +  LR+IG G+FG V    D    E VAIK +    +   +  +  + E+  L 
Sbjct: 50  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL- 108

Query: 147 LLKRYDRSGSRCVQIRNWFD---YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
                     R      +       +   +V E    S  D L  +  +P     +  + 
Sbjct: 109 -------QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVT 160

Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
              L+ +A++H   +IH D+K  NIL                           L +   +
Sbjct: 161 HGALQGLAYLHSHNMIHRDVKAGNIL---------------------------LSEPGLV 193

Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEA- 319
           K+ DFGS +      N  V T ++ APEVIL +    +    D+WS+G   IEL   +  
Sbjct: 194 KLGDFGSAS-IMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
           LF  +      AM    L  I Q+      +                             
Sbjct: 253 LFNMN------AM--SALYHIAQN------ES---------------------------- 270

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
           P LQ+       H + Y  + +   L+  P  R T+   LKH F  R
Sbjct: 271 PALQS------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  111 bits (281), Expect = 6e-28
 Identities = 70/340 (20%), Positives = 127/340 (37%), Gaps = 90/340 (26%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYR--EAAMTEIDVLELLKRY 151
            Y I   +GEG+FG+V      +T + VA+K +  + +KK         EI  L+LL+  
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH- 68

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                  +++ +       I +V E  G  L+D++ +   +    D  R   +Q++  + 
Sbjct: 69  ----PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAIE 122

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           + H  +++H DLKPEN+L                           L  +  +K+ DFG +
Sbjct: 123 YCHRHKIVHRDLKPENLL---------------------------LDDNLNVKIADFGLS 155

Query: 272 AYEHQEHNYIVS--TRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLE 328
                 +    S  + +Y APEVI G  ++ P  D+WS G +L  +  G   F   E + 
Sbjct: 156 NIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD-DEFI- 213

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
                         ++ K+        V       P+                       
Sbjct: 214 -------------PNLFKK--------VNSCVYVMPD----------------------- 229

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            +   A     L++ ++  DP  R+T  +  + P+F  + 
Sbjct: 230 FLSPGA---QSLIRRMIVADPMQRITIQEIRRDPWFNVNL 266

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  110 bits (278), Expect = 7e-28
 Identities = 63/342 (18%), Positives = 123/342 (35%), Gaps = 89/342 (26%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDR 153
            + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L     
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH--- 64

Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V+        N   +  E   G  L+D +  +     P    +    QL+  V +
Sbjct: 65  --ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 120

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-ST 271
           +H + + H D+KPEN+L                           L +   +K+ DFG +T
Sbjct: 121 LHGIGITHRDIKPENLL---------------------------LDERDNLKISDFGLAT 153

Query: 272 AYEHQEHNYIVSTR----HYRAPEVILGLGWS-YPCDMWSVGCILIELCSGEALFQTHEN 326
            + +     +++       Y APE++    +   P D+WS G +L  + +GE  +    +
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
                                  +  + +       W                       
Sbjct: 214 --------------SCQEYSDWKE-KKTY----LNPW----------------------- 231

Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
            + +D +    + LL  +L  +PS+R+T  D  K  ++ +  
Sbjct: 232 -KKIDSAP---LALLHKILVENPSARITIPDIKKDRWYNKPL 269

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  111 bits (279), Expect = 8e-28
 Identities = 76/347 (21%), Positives = 132/347 (38%), Gaps = 97/347 (27%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYD 152
              ++I+ ++G+G FG+V    ++ETG   A KV+ +  +   E  + EI++L       
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEIL------- 70

Query: 153 RSGSRCVQIRNWFD---YRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
            +      I        +   + I+ E   G ++   + + + R      ++ + RQ+LE
Sbjct: 71  -ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLE 128

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + F+H  R+IH DLK  N+L                           +     I++ DF
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVL---------------------------MTLEGDIRLADF 161

Query: 269 GSTA---YEHQEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEA- 319
           G +A      Q+ +  + T ++ APEV++        + Y  D+WS+G  LIE+   E  
Sbjct: 162 GVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
             + +       M  RVL  I +      D P         L  P    S E        
Sbjct: 222 HHELN------PM--RVLLKIAKS-----DPP--------TLLTPS-KWSVE-------- 251

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                              D L+  L  +P +R +A   L+HPF + 
Sbjct: 252 -----------------FRDFLKIALDKNPETRPSAAQLLEHPFVSS 281

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  110 bits (277), Expect = 2e-27
 Identities = 63/355 (17%), Positives = 125/355 (35%), Gaps = 111/355 (31%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAM---TEIDVLELL-- 148
           +Y +   +GEG++G+V + LD ET    A+K++  + +++          EI +L  L  
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65

Query: 149 ----KRYDRSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVRE 201
               +  D      V + N  + +  + +V E        + D + +   + FPV     
Sbjct: 66  KNVIQLVD------V-LYN--EEKQKMYMVMEYCVCGMQEMLDSVPE---KRFPVCQAHG 113

Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
              QL++ + ++H   ++H D+KP N+L                           L    
Sbjct: 114 YFCQLIDGLEYLHSQGIVHKDIKPGNLL---------------------------LTTGG 146

Query: 262 AIKVIDFG-STAYEHQEHNYIVSTR----HYRAPEVILGLGWSY---PCDMWSVGCILIE 313
            +K+   G + A      +    T      ++ PE+  GL  ++     D+WS G  L  
Sbjct: 147 TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLD-TFSGFKVDIWSAGVTLYN 205

Query: 314 LCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESI 373
           + +G   F+  +N+                + +         + +G    P         
Sbjct: 206 ITTGLYPFE-GDNI--------------YKLFEN--------IGKGSYAIPG-------- 234

Query: 374 KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                                    DLL+G+L Y+P+ R +     +H +F + +
Sbjct: 235 ---------------DCGPPL---SDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  110 bits (276), Expect = 2e-27
 Identities = 68/353 (19%), Positives = 124/353 (35%), Gaps = 103/353 (29%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR--- 150
              ++++  +G GT+GQV      +TG+  AIKV+       E    EI++L+       
Sbjct: 23  AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRN 82

Query: 151 -------YDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
                  + +     +  + W        +V E     S+ D ++         + +  I
Sbjct: 83  IATYYGAFIKKNPPGMDDQLW--------LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 134

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            R++L  ++ +H  ++IH D+K +N+L                           L +++ 
Sbjct: 135 CREILRGLSHLHQHKVIHRDIKGQNVL---------------------------LTENAE 167

Query: 263 IKVIDFGSTA---YEHQEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIEL 314
           +K++DFG +A         N  + T ++ APEVI         + +  D+WS+G   IE+
Sbjct: 168 VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227

Query: 315 CSGEA-LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESI 373
             G   L   H       M  R L  IP++                              
Sbjct: 228 AEGAPPLCDMH------PM--RALFLIPRN------PA---------------------- 251

Query: 374 KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                 PRL++         +      ++  L  + S R      +KHPF   
Sbjct: 252 ------PRLKS------KKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  110 bits (278), Expect = 2e-27
 Identities = 69/337 (20%), Positives = 113/337 (33%), Gaps = 79/337 (23%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           RY  ++ IG G FG      D+ T E VA+K +       E    EI     L+      
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRH----- 75

Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              V+ +       H+ I+ E   G  LY+ +       F  D  R   +QLL  V++ H
Sbjct: 76  PNIVRFKEVILTPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCH 133

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            +++ H DLK EN L                    D +   R      +K+ DFG +   
Sbjct: 134 SMQICHRDLKLENTLL-------------------DGSPAPR------LKICDFGYSKSS 168

Query: 275 HQEH--NYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
                    V T  Y APEV+L   +     D+WS G  L  +  G   F+         
Sbjct: 169 VLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE-DPE----- 222

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
                    P+   K + +     +   +   P+                        + 
Sbjct: 223 --------EPRDYRKTIQR-----ILSVKYSIPDDI---------------------RIS 248

Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                   L+  +   DP++R++  +   H +F ++ 
Sbjct: 249 PEC---CHLISRIFVADPATRISIPEIKTHSWFLKNL 282

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  108 bits (273), Expect = 3e-27
 Identities = 78/344 (22%), Positives = 126/344 (36%), Gaps = 97/344 (28%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKR 150
            Y +   +G GTFG+V     + TG  VA+K++ + +K R   +      EI  L+L + 
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKIL-NRQKIRSLDVVGKIKREIQNLKLFRH 70

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   +++           +V E + G  L+D++ K+          R + +Q+L  
Sbjct: 71  -----PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSA 123

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           V + H   ++H DLKPEN+L                           L      K+ DFG
Sbjct: 124 VDYCHRHMVVHRDLKPENVL---------------------------LDAHMNAKIADFG 156

Query: 270 STAYEHQEHNYIVSTR----HYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTH 324
            +          + T     +Y APEVI G  ++ P  D+WS G IL  L  G   F   
Sbjct: 157 LSNMMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD-D 213

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
           E++                + K+        +R G    PE                   
Sbjct: 214 EHV--------------PTLFKK--------IRGGVFYIPE------------------- 232

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
               +++ S      LL  +L+ DP  R T  D  +H +F +D 
Sbjct: 233 ----YLNRSV---ATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  109 bits (274), Expect = 5e-27
 Identities = 73/349 (20%), Positives = 122/349 (34%), Gaps = 96/349 (27%)

Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLE 146
            +     Y++L+ IG+G F +V       TG  VAIK++   +      +    E+ +++
Sbjct: 10  EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 69

Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQ 205
           +L          V++    +    + ++ E   G  ++D+L  +          R   RQ
Sbjct: 70  ILNH-----PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQ 122

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           ++  V + H  R++H DLK EN+L                           L     IK+
Sbjct: 123 IVSAVQYCHQKRIVHRDLKAENLL---------------------------LDADMNIKI 155

Query: 266 IDFG-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQ 322
            DFG S  +      +       Y APE+  G  +  P  D+WS+G IL  L SG   F 
Sbjct: 156 ADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215

Query: 323 THENLEHLAMMERVLG---PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
             +NL+   + ERVL     IP +M                        S +        
Sbjct: 216 -GQNLK--ELRERVLRGKYRIPFYM------------------------STD-------- 240

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                              +LL+  L  +P  R T    +K  +    +
Sbjct: 241 -----------------CENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  108 bits (273), Expect = 8e-27
 Identities = 64/350 (18%), Positives = 123/350 (35%), Gaps = 105/350 (30%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELL----- 148
            + +++ +GEG +G+V   ++R T E VA+K+V  +      E    EI + ++L     
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67

Query: 149 -KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
            K Y                 N   +  E   G  L+D +  +     P    +    QL
Sbjct: 68  VKFYGHRRE-----------GNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQL 114

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           +  V ++H + + H D+KPEN+L                           L +   +K+ 
Sbjct: 115 MAGVVYLHGIGITHRDIKPENLL---------------------------LDERDNLKIS 147

Query: 267 DFG-STAYEHQEHNYIVSTR----HYRAPEVILGLGWSY---PCDMWSVGCILIELCSGE 318
           DFG +T + +     +++       Y APE++      +   P D+WS G +L  + +GE
Sbjct: 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGE 205

Query: 319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
             +    +                       +  + +       W               
Sbjct: 206 LPWDQPSD--------------SCQEYSDWKE-KKTY----LNPW--------------- 231

Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                    + +D +    + LL  +L  +PS+R+T  D  K  ++ +  
Sbjct: 232 ---------KKIDSAP---LALLHKILVENPSARITIPDIKKDRWYNKPL 269

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  104 bits (262), Expect = 2e-25
 Identities = 67/348 (19%), Positives = 118/348 (33%), Gaps = 85/348 (24%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLK--- 149
             Y++   IG G    V         E VAIK +     +   +  + EI  +       
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 150 --RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVRE----- 201
              Y  S          F  ++ + +V + + G S+ D ++    +      V +     
Sbjct: 75  IVSYYTS----------FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA 124

Query: 202 -IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
            I R++LE + ++H    IH D+K  NIL      ++I D+ V+A               
Sbjct: 125 TILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF-------------- 170

Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEA 319
                +  G     ++     V T  + APEV+    G+ +  D+WS G   IEL +G A
Sbjct: 171 -----LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 225

Query: 320 -LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
              +         M  +VL    Q+    ++   +      +         +        
Sbjct: 226 PYHKYP------PM--KVLMLTLQNDPPSLETGVQDKEMLKKY-------GKS------- 263

Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                                ++   L+ DP  R TA + L+H FF +
Sbjct: 264 ------------------FRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  105 bits (263), Expect = 7e-25
 Identities = 78/344 (22%), Positives = 128/344 (37%), Gaps = 97/344 (28%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKR 150
            Y +   +G GTFG+V       TG  VA+K++ + +K R   +      EI  L+L + 
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKIL-NRQKIRSLDVVGKIRREIQNLKLFRH 75

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   +++       + I +V E + G  L+D++ KN          R + +Q+L  
Sbjct: 76  -----PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSG 128

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           V + H   ++H DLKPEN+L                           L      K+ DFG
Sbjct: 129 VDYCHRHMVVHRDLKPENVL---------------------------LDAHMNAKIADFG 161

Query: 270 STAYEHQEHNYIVSTR----HYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTH 324
            +          + T     +Y APEVI G  ++ P  D+WS G IL  L  G   F   
Sbjct: 162 LSNMMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD-D 218

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
           +++                + K+        +  G    P+                   
Sbjct: 219 DHV--------------PTLFKK--------ICDGIFYTPQ------------------- 237

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
               +++ S    I LL+ +L+ DP  R T  D  +H +F +D 
Sbjct: 238 ----YLNPSV---ISLLKHMLQVDPMKRATIKDIREHEWFKQDL 274

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  101 bits (255), Expect = 1e-24
 Identities = 65/343 (18%), Positives = 125/343 (36%), Gaps = 92/343 (26%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRS 154
            + + ++G G +G V       +G+ +A+K +R+    + ++  + ++D+          
Sbjct: 9   LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS-------MR 61

Query: 155 GSRCVQIRNW---FDYRNHICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLEC 209
              C     +         + I  E++  SL  F ++  +  +  P D++ +I   +++ 
Sbjct: 62  TVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKA 121

Query: 210 VAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
           +  +H  L +IH D+KP N+L  +   +K+ D+ ++            L    A      
Sbjct: 122 LEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISG----------YLVDDVA------ 165

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILG----LGWSYPCDMWSVGCILIELCSGEALFQTH 324
                     +     + Y APE I       G+S   D+WS+G  +IEL      + + 
Sbjct: 166 ---------KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 216

Query: 325 EN-LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
               + L  +  V  P PQ        PA+KF             S E            
Sbjct: 217 GTPFQQLKQV--VEEPSPQ-------LPADKF-------------SAE------------ 242

Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                         +D     L+ +   R T  + ++HPFFT 
Sbjct: 243 -------------FVDFTSQCLKKNSKERPTYPELMQHPFFTL 272

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  101 bits (254), Expect = 2e-24
 Identities = 63/344 (18%), Positives = 114/344 (33%), Gaps = 95/344 (27%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRS 154
            + L ++G GT GQV     R+TG  +A+K +R    K+  +  + ++DV+         
Sbjct: 27  LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV-------LK 79

Query: 155 GSRCVQIRNW---FDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
              C  I      F     + I  E++G       ++    P P  ++ ++   +++ + 
Sbjct: 80  SHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALY 138

Query: 212 FMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
           ++ +   +IH D+KP NIL                           L +   IK+ DFG 
Sbjct: 139 YLKEKHGVIHRDVKPSNIL---------------------------LDERGQIKLCDFGI 171

Query: 271 TAY--EHQEHNYIVSTRHYRAPEVI-----LGLGWSYPCDMWSVGCILIELCSGEA-LFQ 322
           +    + +  +       Y APE I         +    D+WS+G  L+EL +G+     
Sbjct: 172 SGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
              + E L  +  +    P             F             S +           
Sbjct: 232 CKTDFEVLTKV--LQEEPPL------LPGHMGF-------------SGD----------- 259

Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                             ++  L  D   R   +  L+H F  R
Sbjct: 260 --------------FQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  100 bits (252), Expect = 3e-24
 Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 44/255 (17%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           ++   +G G FG V  C  +   + VAIK + S +  R+A + E+  L  +         
Sbjct: 11  EVEEVVGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVELRQLSRVN------HP 61

Query: 158 CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRP-FPVDLVREIGRQLLECVAFMHD 215
            + ++ +    N +C+V E   G SLY+ L      P +          Q  + VA++H 
Sbjct: 62  NI-VKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120

Query: 216 LR---LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           ++   LIH DLKP N+L V+          V                   +K+ DFG+  
Sbjct: 121 MQPKALIHRDLKPPNLLLVA-------GGTV-------------------LKICDFGTAC 154

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                      +  + APEV  G  +S  CD++S G IL E+ +    F          M
Sbjct: 155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 214

Query: 333 MERVLG---PIPQHM 344
                G   P+ +++
Sbjct: 215 WAVHNGTRPPLIKNL 229

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  101 bits (253), Expect = 4e-24
 Identities = 72/346 (20%), Positives = 120/346 (34%), Gaps = 94/346 (27%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRS 154
            K L +IG G +G V   + + +G+ +A+K +RS      ++  + ++DV+         
Sbjct: 24  LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV-------MR 76

Query: 155 GSRCVQIRNW---FDYRNHICIVFEMLGPSLYDFLRK---NNYRPFPVDLVREIGRQLLE 208
            S C  I  +           I  E++  S   F +          P +++ +I    ++
Sbjct: 77  SSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK 136

Query: 209 CVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
            +  + + L++IH D+KP NIL                           L +S  IK+ D
Sbjct: 137 ALNHLKENLKIIHRDIKPSNIL---------------------------LDRSGNIKLCD 169

Query: 268 FGSTAY--EHQEHNYIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILIELCSGEA-L 320
           FG +    +          R Y APE I       G+    D+WS+G  L EL +G    
Sbjct: 170 FGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
            + +   + L  +  V G  PQ  L   +    +F             S           
Sbjct: 230 PKWNSVFDQLTQV--VKGDPPQ--LS--NSEEREF-------------SPS--------- 261

Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                            I+ +   L  D S R    + LKHPF   
Sbjct: 262 ----------------FINFVNLCLTKDESKRPKYKELLKHPFILM 291

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score =  100 bits (252), Expect = 5e-24
 Identities = 57/234 (24%), Positives = 91/234 (38%), Gaps = 42/234 (17%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
            +++ +KIG G FG++    +  T E VAIK+     +       E    + L       
Sbjct: 10  NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP-QLHLEYRFYKQLG-----S 63

Query: 156 SRCV-QIRNWF-DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
              + Q+  +F     +  +V E+LGPSL D L     R F +  V  I  QL+  + ++
Sbjct: 64  GDGIPQVY-YFGPCGKYNAMVLELLGPSLED-LFDLCDRTFSLKTVLMIAIQLISRMEYV 121

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STA 272
           H   LI+ D+KPEN L   P                             I +IDF  +  
Sbjct: 122 HSKNLIYRDVKPENFLIGRPGN----------------------KTQQVIHIIDFALAKE 159

Query: 273 Y------EH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           Y      +H   +EH  +  T  Y +    LG   S   D+ ++G + +    G
Sbjct: 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 213

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 98.2 bits (245), Expect = 3e-23
 Identities = 58/234 (24%), Positives = 93/234 (39%), Gaps = 42/234 (17%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
            YK+ R+IGEG+FG + +  +    + VAIK         +    E    +LL      G
Sbjct: 11  HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRD-EYRTYKLLA-----G 64

Query: 156 SRCV-QIRNWF-DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
              +  +  +F     H  +V ++LGPSL D L     R F V  V    +Q+L  V  +
Sbjct: 65  CTGIPNVY-YFGQEGLHNVLVIDLLGPSLED-LLDLCGRKFSVKTVAMAAKQMLARVQSI 122

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STA 272
           H+  L++ D+KP+N L   P                          ++ I V+DFG    
Sbjct: 123 HEKSLVYRDIKPDNFLIGRP----------------------NSKNANMIYVVDFGMVKF 160

Query: 273 Y------EH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           Y      +H   +E   +  T  Y +    LG   S   D+ ++G + +    G
Sbjct: 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG 214

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 97.8 bits (244), Expect = 4e-23
 Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           RY++ RKIG G+FG +    D   GE VAIK+     K+ +  + E  + +++      G
Sbjct: 10  RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-ESKIYKMM-----QG 63

Query: 156 SRCV-QIRNWF-DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
              +  IR W     ++  +V E+LGPSL D L     R F +  V  +  Q++  + ++
Sbjct: 64  GVGIPTIR-WCGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRIEYI 121

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STA 272
           H    IH D+KP+N L                             K + + +IDFG +  
Sbjct: 122 HSKNFIHRDVKPDNFLM------------------------GLGKKGNLVYIIDFGLAKK 157

Query: 273 Y------EH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           Y      +H   +E+  +  T  Y +    LG+  S   D+ S+G +L+    G
Sbjct: 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 211

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  100 bits (251), Expect = 5e-23
 Identities = 72/342 (21%), Positives = 128/342 (37%), Gaps = 95/342 (27%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMT--EIDVLELLKRYDR 153
            + R IG G FG+V  C   +TG+  A+K +    IK  +   +   E  +L L+   D 
Sbjct: 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD- 250

Query: 154 SGSRC---VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
               C   V +   F   + +  + + M G  L+  L ++    F    +R    +++  
Sbjct: 251 ----CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILG 304

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +  MH+  +++ DLKP NIL                           L +   +++ D G
Sbjct: 305 LEHMHNRFVVYRDLKPANIL---------------------------LDEHGHVRISDLG 337

Query: 270 -STAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
            +  +  ++ +  V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+  
Sbjct: 338 LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
           +   +    L                       ++ P+   S E                
Sbjct: 398 DKHEIDRMTL--------------------TMAVELPDSF-SPEL--------------- 421

Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
                       LL+GLL+ D + RL      A +  + PFF
Sbjct: 422 ----------RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 97.3 bits (243), Expect = 6e-23
 Identities = 68/344 (19%), Positives = 116/344 (33%), Gaps = 99/344 (28%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYD 152
           +K  + +GEG+F  V+   +  T    AIK++    I K  +      E DV+  L    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-- 89

Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                 V++   F     +           L  ++RK     F     R    +++  + 
Sbjct: 90  ---PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALE 144

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-- 269
           ++H   +IH DLKPENIL                    + + +        I++ DFG  
Sbjct: 145 YLHGKGIIHRDLKPENILL-------------------NEDMH--------IQITDFGTA 177

Query: 270 ---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
              S   +    N  V T  Y +PE++         D+W++GCI+ +L +G   F    N
Sbjct: 178 KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGN 236

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
                + ++++                    +   D+P                      
Sbjct: 237 --EYLIFQKII--------------------KLEYDFP---------------------- 252

Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLT------AHDALKHPFF 424
            +     A    DL++ LL  D + RL             HPFF
Sbjct: 253 -EKFFPKA---RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 99.3 bits (247), Expect = 9e-23
 Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 44/234 (18%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           ++++ RKIG G+FG++    + +T E VAIK+     K+ +    E  +  +L+     G
Sbjct: 8   KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY-ESKIYRILQ-----G 61

Query: 156 SRCV-QIRNWF-DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
              +  +R WF    ++  +V ++LGPSL D L     R   +  V  +  Q++  V F+
Sbjct: 62  GTGIPNVR-WFGVEGDYNVLVMDLLGPSLED-LFNFCSRKLSLKTVLMLADQMINRVEFV 119

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STA 272
           H    +H D+KP+N L                             +++ + +IDFG +  
Sbjct: 120 HSKSFLHRDIKPDNFLM------------------------GLGRRANQVYIIDFGLAKK 155

Query: 273 Y------EH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
           Y      +H   +E+  +  T  Y +    LG+  S   D+ S+G +L+    G
Sbjct: 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 97.9 bits (244), Expect = 4e-22
 Identities = 73/340 (21%), Positives = 124/340 (36%), Gaps = 89/340 (26%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMT--EIDVLELLKRYD 152
           ++  R +G+G FG+V  C  R TG+  A K +    IKK +  AM   E  +LE +    
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN--- 242

Query: 153 RSGSRC-VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
              SR  V +   ++ ++ +C+V   M G  L   +       FP         ++   +
Sbjct: 243 ---SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
             +H  R+++ DLKPENIL     +++I D  +                      +  G 
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLA-------------------VHVPEGQ 340

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH-ENLEH 329
           T          V T  Y APEV+    +++  D W++GC+L E+ +G++ FQ   + ++ 
Sbjct: 341 TI------KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394

Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
             +   V                                     +   +           
Sbjct: 395 EEVERLVK------------------------------------EVPEEYSE-------R 411

Query: 390 VDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
               A     L   LL  DP+ RL     +A +  +HP F
Sbjct: 412 FSPQA---RSLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 96.8 bits (241), Expect = 8e-22
 Identities = 67/345 (19%), Positives = 117/345 (33%), Gaps = 98/345 (28%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREA--AMTEIDVLELLKRYDR 153
              R +G G FG+V  C  + TG+  A K +    +KK +    AM E  +L  +     
Sbjct: 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH---- 243

Query: 154 SGSR-CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRP--FPVDLVREIGRQLLEC 209
             SR  V +   F+ +  +C+V   M G  +   +   +     F          Q++  
Sbjct: 244 --SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +  +H   +I+ DLKPEN+L                           L     +++ D G
Sbjct: 302 LEHLHQRNIIYRDLKPENVL---------------------------LDDDGNVRISDLG 334

Query: 270 STAYEHQEHNYIVSTR----HYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH- 324
             A E +              + APE++LG  + +  D +++G  L E+ +    F+   
Sbjct: 335 -LAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
           E +E+  + +RVL                                    +  +  P    
Sbjct: 394 EKVENKELKQRVL------------------------------------EQAVTYPD--- 414

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
                   ++    D  + LL+ DP  RL     +      HP F
Sbjct: 415 ----KFSPAS---KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 94.3 bits (235), Expect = 1e-21
 Identities = 67/341 (19%), Positives = 127/341 (37%), Gaps = 99/341 (29%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYD 152
           +  ++ +G G+FG+V+    +E+G   A+K++    + K ++    + E  +L+ +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98

Query: 153 RSGSRC---VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                    V++   F   +++ +V E + G  ++  LR+     F     R    Q++ 
Sbjct: 99  ----NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 152

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
              ++H L LI+ DLKPEN+L                    D   Y        I+V DF
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLI-------------------DQQGY--------IQVTDF 185

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           G           +  T    APE+IL  G++   D W++G ++ E+ +G   F   +   
Sbjct: 186 GFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQ-- 242

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
            + + E+++                     G++ +P                        
Sbjct: 243 PIQIYEKIV--------------------SGKVRFP-----------------------S 259

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
           H         DLL+ LL+ D + R        +D   H +F
Sbjct: 260 HFSSDL---KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 92.1 bits (229), Expect = 7e-21
 Identities = 27/157 (17%), Positives = 53/157 (33%), Gaps = 29/157 (18%)

Query: 96  RYKILRKIGEGTFGQV--------LDCLDRETGETVAIKV-------VRSIKKY-REAAM 139
           ++K+         G +        L C      +  ++K+             + R A  
Sbjct: 43  QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKP 102

Query: 140 TEIDVLELLKRYDRSG-SRCVQIRNWF-----DYRNHICIVFEMLGPSLYDFLRKNNYRP 193
            +++  + L          C+     F      YR    +V   LG SL   L  +    
Sbjct: 103 LQVNKWKKLYSTPLLAIPTCM----GFGVHQDKYR---FLVLPSLGRSLQSALDVSPKHV 155

Query: 194 FPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
                V ++  +LL+ + F+H+   +H ++  ENI  
Sbjct: 156 LSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV 192

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 90.0 bits (224), Expect = 2e-20
 Identities = 63/265 (23%), Positives = 98/265 (36%), Gaps = 55/265 (20%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL---ELLKRYDRS 154
            +   IG G FG+V        G+ VA+K  R      + + T  +V    +L       
Sbjct: 10  TLEEIIGIGGFGKVYRAFWI--GDEVAVKAARH-DPDEDISQTIENVRQEAKLFAMLKHP 66

Query: 155 ------GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
                 G  C++         ++C+V E   G  L   L     +  P D++     Q+ 
Sbjct: 67  NIIALRGV-CLK-------EPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIA 115

Query: 208 ECVAFMHD---LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
             + ++HD   + +IH DLK  NIL +          K+                   +K
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKI-------------------LK 156

Query: 265 VIDFGSTAYEHQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
           + DFG     H+           + APEVI    +S   D+WS G +L EL +GE  F  
Sbjct: 157 ITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF-- 214

Query: 324 HENLEHLAMMERVLG-----PIPQH 343
              ++ LA+   V       PIP  
Sbjct: 215 -RGIDGLAVAYGVAMNKLALPIPST 238

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 89.7 bits (223), Expect = 2e-20
 Identities = 51/267 (19%), Positives = 92/267 (34%), Gaps = 53/267 (19%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           +  ++IG+G FG V      +    VAIK +         +  E +++E  + + R    
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLI-----LGDSEGETEMIEKFQEFQRE--- 73

Query: 158 CVQIRNWFDYRN----------HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
            V I +  ++ N             +V E +    LY  L      P    +   +   +
Sbjct: 74  -VFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDI 131

Query: 207 LECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
              + +M +    ++H DL+  NI   S       +  V A                  K
Sbjct: 132 ALGIEYMQNQNPPIVHRDLRSPNIFLQS----LDENAPVCA------------------K 169

Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSY--PCDMWSVGCILIELCSGEALFQ 322
           V DFG +       + ++    + APE I     SY    D +S   IL  + +GE  F 
Sbjct: 170 VADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229

Query: 323 THENLEHLAMMERVLG-----PIPQHM 344
            +   + +  +  +        IP+  
Sbjct: 230 EYSYGK-IKFINMIREEGLRPTIPEDC 255

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 91.2 bits (227), Expect = 2e-20
 Identities = 65/338 (19%), Positives = 116/338 (34%), Gaps = 93/338 (27%)

Query: 99  ILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYDRS 154
           ILR IG+G+FG+V      +T +  A+K +      +  E      E+ +++ L+     
Sbjct: 19  ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE----- 73

Query: 155 GSRC---VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                  V +   F     + +V + +LG  L   L++N    F  + V+    +L+  +
Sbjct: 74  ---HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMAL 128

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++ + R+IH D+KP+NIL     ++ I          TD N    LP+           
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHI----------TDFNIAAMLPRE---------- 168

Query: 271 TAYEHQEHNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
                 +   +  T+ Y APE+     G G+S+  D WS+G    EL  G   +    + 
Sbjct: 169 -----TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST 223

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
               ++                           + +P                       
Sbjct: 224 SSKEIVHTFE--------------------TTVVTYP----------------------- 240

Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRL-TAHDALKHPFF 424
                     + LL+ LL  +P  R     D    P+ 
Sbjct: 241 SAWSQEM---VSLLKKLLEPNPDQRFSQLSDVQNFPYM 275

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 91.3 bits (227), Expect = 3e-20
 Identities = 74/348 (21%), Positives = 122/348 (35%), Gaps = 99/348 (28%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYD 152
           ++IL+ IG G F +V     ++TG+  A+K++    + K  E +    E DVL       
Sbjct: 63  FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD--- 119

Query: 153 RSGSRC-VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
               R   Q+   F   N++ +V E  +G  L   L K   R  P ++ R    +++  +
Sbjct: 120 ---RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAI 175

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
             +H L  +H D+KP+NIL                           L +   I++ DFGS
Sbjct: 176 DSVHRLGYVHRDIKPDNIL---------------------------LDRCGHIRLADFGS 208

Query: 271 TAYEHQEH----NYIVSTRHYRAPEVILGLGWSY-------PCDMWSVGCILIELCSGEA 319
                 +        V T  Y +PE++  +G           CD W++G    E+  G+ 
Sbjct: 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQT 268

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
            F   ++        +++                    +  L  P               
Sbjct: 269 PF-YADSTA--ETYGKIVH------------------YKEHLSLPLVD------------ 295

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL---KHPFF 424
                   + V   A    D +Q LL   P +RL    A     HPFF
Sbjct: 296 --------EGVPEEA---RDFIQRLLC-PPETRLGRGGAGDFRTHPFF 331

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 91.5 bits (227), Expect = 5e-20
 Identities = 51/252 (20%), Positives = 95/252 (37%), Gaps = 51/252 (20%)

Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRE-TGETVAIKVVRSIK--KYREAAMTEIDVLE 146
           G+ +  +Y++   I  G  G +   LDR   G  V +K +      + +  AM E   L 
Sbjct: 75  GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLA 134

Query: 147 LL------KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLV 199
            +      + ++       +  +   Y     IV E + G SL         +  PV   
Sbjct: 135 EVVHPSIVQIFN-FVEHTDRHGDPVGY-----IVMEYVGGQSLKRSKG----QKLPVAEA 184

Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
                ++L  ++++H + L++ DLKPENI+ ++ E                         
Sbjct: 185 IAYLLEILPALSYLHSIGLVYNDLKPENIM-LTEE------------------------- 218

Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
              +K+ID G+         Y+  T  ++APE++   G +   D+++VG  L  L     
Sbjct: 219 --QLKLIDLGA-VSRINSFGYLYGTPGFQAPEIVRT-GPTVATDIYTVGRTLAALTLDLP 274

Query: 320 LFQTHENLEHLA 331
                  ++ L 
Sbjct: 275 TR-NGRYVDGLP 285

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 88.6 bits (220), Expect = 1e-19
 Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 22/151 (14%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
           ++ + +KIG G FG +         E  A  VV+   +      +E+   + + + D   
Sbjct: 38  QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIK 97

Query: 156 SRCVQIRN---------WF--------DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL 198
               + +                     YR    +V E LG  L     +N    F    
Sbjct: 98  KWIERKQLDYLGIPLFYGSGLTEFKGRSYR---FMVMERLGIDLQKISGQN--GTFKKST 152

Query: 199 VREIGRQLLECVAFMHDLRLIHTDLKPENIL 229
           V ++G ++L+ + ++H+   +H D+K  N+L
Sbjct: 153 VLQLGIRMLDVLEYIHENEYVHGDIKAANLL 183

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 87.8 bits (218), Expect = 4e-19
 Identities = 70/345 (20%), Positives = 122/345 (35%), Gaps = 99/345 (28%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYD 152
           Y++++ IG G FG+V     + T +  A+K++    + K  ++A    E D++       
Sbjct: 71  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--- 127

Query: 153 RSGSRC-VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
              S   VQ+   F    ++ +V E M G  L + +        P    R    +++  +
Sbjct: 128 ---SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLAL 181

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
             +H +  IH D+KP+N+L                           L KS  +K+ DFG+
Sbjct: 182 DAIHSMGFIHRDVKPDNML---------------------------LDKSGHLKLADFGT 214

Query: 271 TAYEHQEHNY----IVSTRHYRAPEVILGLGWSYP----CDMWSVGCILIELCSGEALFQ 322
               ++E        V T  Y +PEV+   G        CD WSVG  L E+  G+  F 
Sbjct: 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF- 273

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
             ++L       +++                    +  L +P+     +  K        
Sbjct: 274 YADSLV--GTYSKIMN------------------HKNSLTFPDDNDISKEAK-------- 305

Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL---KHPFF 424
                           +L+   L  D   RL  +      +H FF
Sbjct: 306 ----------------NLICAFLT-DREVRLGRNGVEEIKRHLFF 333

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 86.8 bits (216), Expect = 4e-19
 Identities = 72/341 (21%), Positives = 122/341 (35%), Gaps = 99/341 (29%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYD 152
           ++ILR +G G+FG+V     R  G   A+KV++   + + ++      E  +L ++    
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV---- 63

Query: 153 RSGSRC---VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                    +++   F     I ++ + + G  L+  LRK   + FP  + +    ++  
Sbjct: 64  ----THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCL 117

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H   +I+ DLKPENIL                    D N +        IK+ DF
Sbjct: 118 ALEYLHSKDIIYRDLKPENILL-------------------DKNGH--------IKITDF 150

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           G   Y       +  T  Y APEV+    ++   D WS G ++ E+ +G   F    N  
Sbjct: 151 GFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF-YDSN-- 207

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
            +   E++L                       L +P                        
Sbjct: 208 TMKTYEKIL--------------------NAELRFP-----------------------P 224

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
             +       DLL  L+  D S RL        D   HP+F
Sbjct: 225 FFNEDV---KDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 87.5 bits (217), Expect = 6e-19
 Identities = 71/346 (20%), Positives = 124/346 (35%), Gaps = 97/346 (28%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYD 152
           ++IL+ IG G FG+V     +   +  A+K++    + K  E A    E DVL       
Sbjct: 76  FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD--- 132

Query: 153 RSGSRC-VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
              S+    +   F   N++ +V +  +G  L   L K   R  P ++ R    +++  +
Sbjct: 133 ---SKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAI 188

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
             +H L  +H D+KP+NIL                           +  +  I++ DFGS
Sbjct: 189 DSVHQLHYVHRDIKPDNIL---------------------------MDMNGHIRLADFGS 221

Query: 271 TAYEHQEHNYI----VSTRHYRAPEVILGL-----GWSYPCDMWSVGCILIELCSGEALF 321
                ++        V T  Y +PE++  +      +   CD WS+G  + E+  GE  F
Sbjct: 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281

Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
              E+L       +++                                  + K   + P 
Sbjct: 282 -YAESLV--ETYGKIM----------------------------------NHKERFQFPT 304

Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL---KHPFF 424
               V ++         DL++ L+      RL  +      KHPFF
Sbjct: 305 QVTDVSENA-------KDLIRRLIC-SREHRLGQNGIEDFKKHPFF 342

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 51/242 (21%)

Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
           G+ +  RYKI+ K+G G    V    D      VAIK +            E    E LK
Sbjct: 6   GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFI-----PPREKE----ETLK 56

Query: 150 RYDR---SGSR-----CVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVR 200
           R++R   + S+      V + +  +  +   +V E + GP+L +++  +   P  VD   
Sbjct: 57  RFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--GPLSVDTAI 114

Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
               Q+L+ +   HD+R++H D+KP+NIL                           +  +
Sbjct: 115 NFTNQILDGIKHAHDMRIVHRDIKPQNIL---------------------------IDSN 147

Query: 261 SAIKVIDFG----STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
             +K+ DFG     +     + N+++ T  Y +PE   G       D++S+G +L E+  
Sbjct: 148 KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV 207

Query: 317 GE 318
           GE
Sbjct: 208 GE 209

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 84.0 bits (208), Expect = 5e-18
 Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 23/153 (15%)

Query: 96  RYKILRKIGEGTFGQV-----LDCLDRETGETVAIKVVRS--------IKKYREAAMTE- 141
            +K+   IG+G FG +            +     +KV  S        +K Y+ AA  E 
Sbjct: 36  AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQ 95

Query: 142 IDVLELLKRYDRSG-SRC----VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
           I      ++    G  +     +  +N   YR    ++ +  G  L      N  + F  
Sbjct: 96  IQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYR---FMIMDRFGSDLQKIYEANA-KRFSR 151

Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENIL 229
             V ++  ++L+ + ++H+   +H D+K  N+L
Sbjct: 152 KTVLQLSLRILDILEYIHEHEYVHGDIKASNLL 184

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 83.1 bits (206), Expect = 6e-18
 Identities = 55/264 (20%), Positives = 96/264 (36%), Gaps = 58/264 (21%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRS 154
            I  KIG G+FG V        G  VA+K++       +     + E+ +++ L      
Sbjct: 40  NIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRL------ 91

Query: 155 GSR---CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYR-PFPVDLVREIGRQLLEC 209
             R    V          ++ IV E +   SLY  L K+  R          +   + + 
Sbjct: 92  --RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149

Query: 210 VAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           + ++H+    ++H +LK  N+L                           + K   +KV D
Sbjct: 150 MNYLHNRNPPIVHRNLKSPNLL---------------------------VDKKYTVKVCD 182

Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FG +  +        S   T  + APEV+     +   D++S G IL EL + +  +   
Sbjct: 183 FGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW--- 239

Query: 325 ENLEHLAMMERVLG-----PIPQH 343
            NL    ++  V        IP++
Sbjct: 240 GNLNPAQVVAAVGFKCKRLEIPRN 263

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 83.2 bits (206), Expect = 6e-18
 Identities = 44/228 (19%), Positives = 88/228 (38%), Gaps = 28/228 (12%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAM-TEIDVLELLK-----RY 151
                +G+G FGQ +    RETGE + +K +    +  +     E+ V+  L+     ++
Sbjct: 13  IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF 72

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
              G    +          +  + E + G +L   ++  +   +P        + +   +
Sbjct: 73  --IGV-LYK-------DKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGM 121

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
           A++H + +IH DL   N L    + + + D+ + AR   D        +S          
Sbjct: 122 AYLHSMNIIHRDLNSHNCLVRENKNVVVADFGL-ARLMVDEKTQPEGLRSLKKPDRKKRY 180

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
           T         +V   ++ APE+I G  +    D++S G +L E+    
Sbjct: 181 T---------VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 83.4 bits (207), Expect = 7e-18
 Identities = 67/342 (19%), Positives = 128/342 (37%), Gaps = 87/342 (25%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLELLKRYD 152
           + +LR IG G++ +VL    ++T    A+KVV+    +  +  +   TE  V E      
Sbjct: 11  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ----- 65

Query: 153 RSGSRC---VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
              S     V + + F   + +  V E + G  L         R  P +  R    ++  
Sbjct: 66  --ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISL 121

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H+  +I+ DLK +N+L  S  ++K+ DY               + K      +  
Sbjct: 122 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG--------------MCKEG----LRP 163

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           G T       +    T +Y APE++ G  + +  D W++G ++ E+ +G + F    + +
Sbjct: 164 GDTT------STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 217

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
           +             ++ + +                        ++  +++PR       
Sbjct: 218 NPDQNTE------DYLFQVI------------------------LEKQIRIPR------- 240

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAH------DALKHPFF 424
            +   A     +L+  L  DP  RL  H      D   HPFF
Sbjct: 241 SLSVKA---ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 83.4 bits (207), Expect = 7e-18
 Identities = 61/340 (17%), Positives = 116/340 (34%), Gaps = 97/340 (28%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYD 152
           + + + +G+G+FG+V     ++T +  AIK ++   +    +    M E  VL L     
Sbjct: 19  FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL----- 73

Query: 153 RSGSRC---VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                      +   F  + ++  V E L G  L       +   F +        +++ 
Sbjct: 74  --AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIIL 129

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + F+H   +++ DLK +NIL     ++KI D+               + K +    +  
Sbjct: 130 GLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFG--------------MCKEN----MLG 171

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
            +             T  Y APE++LG  +++  D WS G +L E+  G++ F   +  E
Sbjct: 172 DAKTNT------FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 225

Query: 329 HLAMMERVLG---PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
              +   +       P+ +                         +E+             
Sbjct: 226 ---LFHSIRMDNPFYPRWL------------------------EKEA------------- 245

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK-HPFF 424
                        DLL  L   +P  RL     ++ HP F
Sbjct: 246 ------------KDLLVKLFVREPEKRLGVRGDIRQHPLF 273

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 83.6 bits (207), Expect = 9e-18
 Identities = 70/343 (20%), Positives = 127/343 (37%), Gaps = 89/343 (25%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYD 152
           + +LR IG G++ +VL    ++T    A++VV+   +    +     TE  V E      
Sbjct: 54  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ----- 108

Query: 153 RSGSRC---VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
              S     V + + F   + +  V E + G  L         R  P +  R    ++  
Sbjct: 109 --ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISL 164

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H+  +I+ DLK +N+L  S  ++K+ DY               + K      +  
Sbjct: 165 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG--------------MCKEG----LRP 206

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           G T       +    T +Y APE++ G  + +  D W++G ++ E+ +G +         
Sbjct: 207 GDTT------STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS--------- 251

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM- 387
                     P               F   G  D P+  T     + +L+    + + + 
Sbjct: 252 ----------P---------------FDIVGSSDNPDQNTEDYLFQVILE----KQIRIP 282

Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAH------DALKHPFF 424
           + +   A     +L+  L  DP  RL  H      D   HPFF
Sbjct: 283 RSLSVKA---ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 83.1 bits (205), Expect = 3e-17
 Identities = 62/341 (18%), Positives = 118/341 (34%), Gaps = 95/341 (27%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYD 152
           +  L  +G+G+FG+V+    + T E  A+K+++   + +  +    M E  VL L     
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL----- 397

Query: 153 RSGSRC---VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
               +     Q+ + F   + +  V E + G  L           F          ++  
Sbjct: 398 --PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAI 453

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + F+    +I+ DLK +N++  S  ++KI D+               + K +    I  
Sbjct: 454 GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG--------------MCKEN----IWD 495

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           G T            T  Y APE+I    +    D W+ G +L E+ +G+A F+  +  E
Sbjct: 496 GVTT------KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
              + + ++                                    +  +  P+       
Sbjct: 550 ---LFQSIM------------------------------------EHNVAYPK------- 563

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
            +   A   + + +GL+   P  RL        D  +H FF
Sbjct: 564 SMSKEA---VAICKGLMTKHPGKRLGCGPEGERDIKEHAFF 601

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 81.1 bits (201), Expect = 3e-17
 Identities = 78/340 (22%), Positives = 129/340 (37%), Gaps = 94/340 (27%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYD 152
           +  L+ +G+GTFG+V+   ++ TG   A+K++R   I    E A  +TE  VL+  +   
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-- 64

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   ++  F   + +C V E   G  L  F   +  R F  +  R  G +++  + 
Sbjct: 65  ---PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALE 119

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H   +++ D+K EN++     ++KI D+               L K      I  G+T
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDF--------------GLCKEG----ISDGAT 161

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 162 M------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215

Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
           L +ME +    P+ +                        S E+                 
Sbjct: 216 LILMEEI--RFPRTL------------------------SPEA----------------- 232

Query: 390 VDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
                     LL GLL+ DP  RL      A + ++H FF
Sbjct: 233 --------KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 80.8 bits (200), Expect = 3e-17
 Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 53/246 (21%)

Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--------IKKY-REA-AM 139
             +L+ RY++   +G G   +V    D      VA+KV+R+          ++ REA   
Sbjct: 7   PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA 66

Query: 140 TEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDL 198
             ++   ++  YD   +        +       IV E + G +L D +      P     
Sbjct: 67  AALNHPAIVAVYDTGEAETPAGPLPY-------IVMEYVDGVTLRDIVHTE--GPMTPKR 117

Query: 199 VREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
             E+     + + F H   +IH D+KP NI+                           + 
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIM---------------------------IS 150

Query: 259 KSSAIKVIDFG------STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
            ++A+KV+DFG       +     +   ++ T  Y +PE   G       D++S+GC+L 
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210

Query: 313 ELCSGE 318
           E+ +GE
Sbjct: 211 EVLTGE 216

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 80.7 bits (200), Expect = 5e-17
 Identities = 68/345 (19%), Positives = 122/345 (35%), Gaps = 102/345 (29%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYD 152
           ++ +R +G+G+FG+V+    +ETG+  A+KV++   I +  +    MTE  +L L     
Sbjct: 25  FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL----- 79

Query: 153 RSGSRC---VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                     Q+   F   + +  V E + G  L         R F     R    +++ 
Sbjct: 80  --ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIIS 135

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + F+HD  +I+ DLK +N+L     + K+ D+               + K      I  
Sbjct: 136 ALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFG--------------MCKEG----ICN 177

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           G T            T  Y APE++  + +    D W++G +L E+  G A F+     +
Sbjct: 178 GVTT------ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD 231

Query: 329 HLAMMERVLG---PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
              + E +L      P  +                          ++             
Sbjct: 232 ---LFEAILNDEVVYPTWL------------------------HEDA------------- 251

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRL------TAHDALKHPFF 424
                         +L+  +  +P+ RL        H  L+HPFF
Sbjct: 252 ------------TGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 80.5 bits (199), Expect = 1e-16
 Identities = 80/342 (23%), Positives = 129/342 (37%), Gaps = 101/342 (29%)

Query: 99  ILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYDRS 154
            L+ +G+GTFG+V+   ++ TG   A+K+++   I    E A  +TE  VL+        
Sbjct: 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN------- 204

Query: 155 GSRC---VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
            SR      ++  F   + +C V E   G  L  F   +  R F  D  R  G +++  +
Sbjct: 205 -SRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSAL 261

Query: 211 AFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
            ++H  + +++ DLK EN++     ++KI D+               L K      I  G
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDF--------------GLCKEG----IKDG 303

Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENL 327
           +T            T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L
Sbjct: 304 ATM------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 357

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
             L +ME +    P+ +                          E+               
Sbjct: 358 FELILMEEI--RFPRTL------------------------GPEA--------------- 376

Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
                       LL GLL+ DP  RL      A + ++H FF
Sbjct: 377 ----------KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 64/344 (18%), Positives = 119/344 (34%), Gaps = 101/344 (29%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYD 152
           +  L  +G+G+FG+V+    + T E  A+K+++   + +  +    M E  VL L     
Sbjct: 22  FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL----- 76

Query: 153 RSGSRC---VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
               +     Q+ + F   + +  V E + G  L           F          ++  
Sbjct: 77  --PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAI 132

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + F+    +I+ DLK +N++  S  ++KI D+               + K +    I  
Sbjct: 133 GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG--------------MCKEN----IWD 174

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           G T            T  Y APE+I    +    D W+ G +L E+ +G+A F   E+ +
Sbjct: 175 GVTT------KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-EGEDED 227

Query: 329 HLAMMERVLG---PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
              + + ++      P+ M                        S+E+             
Sbjct: 228 E--LFQSIMEHNVAYPKSM------------------------SKEA------------- 248

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAH-----DALKHPFF 424
                       + + +GL+   P  RL        D  +H FF
Sbjct: 249 ------------VAICKGLMTKHPGKRLGCGPEGERDIKEHAFF 280

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 77.7 bits (192), Expect = 2e-16
 Identities = 38/271 (14%), Positives = 76/271 (28%), Gaps = 71/271 (26%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRS 154
             L K+ E   G++     +  G  + +KV++      +       E   L +       
Sbjct: 13  NFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF------ 64

Query: 155 GSR----------CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIG 203
                        C           H  ++   M   SLY+ L +            +  
Sbjct: 65  --SHPNVLPVLGACQS-----PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFA 117

Query: 204 RQLLECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
             +   +AF+H L   +    L   +++                           + +  
Sbjct: 118 LDMARGMAFLHTLEPLIPRHALNSRSVM---------------------------IDEDM 150

Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP---CDMWSVGCILIELCSGE 318
             ++       +  Q     +    + APE +            DMWS   +L EL + E
Sbjct: 151 TARISMAD-VKFSFQSPG-RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTRE 208

Query: 319 ALFQTHENLEHLAMMERVLG-----PIPQHM 344
             F    +L ++ +  +V        IP  +
Sbjct: 209 VPF---ADLSNMEIGMKVALEGLRPTIPPGI 236

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 77.9 bits (192), Expect = 5e-16
 Identities = 55/309 (17%), Positives = 108/309 (34%), Gaps = 71/309 (22%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK-----RYD 152
            +   IG+G FG+V     +  GE VA+K+  S ++       EI    +L+      + 
Sbjct: 45  VLQESIGKGRFGEV--WRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFI 102

Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
            + ++             + +V +     SL+D+L +       V+ + ++       +A
Sbjct: 103 AADNKD------NGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLA 153

Query: 212 FMHDLRL--------IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            +H   +         H DLK +NIL                           + K+   
Sbjct: 154 HLHMEIVGTQGKPAIAHRDLKSKNIL---------------------------VKKNGTC 186

Query: 264 KVIDFGSTAYEHQEHNYI-------VSTRHYRAPEVILGLGWSYP------CDMWSVGCI 310
            + D G         + I       V T+ Y APEV+               D++++G +
Sbjct: 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 246

Query: 311 LIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSR 370
             E+    ++   HE+ +          P  + M K V        ++ R + P    S 
Sbjct: 247 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV------CEQKLRPNIPNRWQSC 300

Query: 371 ESIKAVLKL 379
           E+++ + K+
Sbjct: 301 EALRVMAKI 309

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 77.2 bits (191), Expect = 6e-16
 Identities = 74/344 (21%), Positives = 133/344 (38%), Gaps = 100/344 (29%)

Query: 98  KILRKIGEGTFGQVL---DCLDRETGETVAIKVVRS---IKKYREAA--MTEIDVLELLK 149
           ++LR +G+G +G+V          TG+  A+KV++    ++  ++ A    E ++LE + 
Sbjct: 20  ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV- 78

Query: 150 RYDRSGSRC---VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                  +    V +   F     + ++ E L G  L  F++      F  D       +
Sbjct: 79  -------KHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAE 129

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +   +  +H   +I+ DLKPENI+     ++K+ D+               L K S    
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG--------------LCKES---- 171

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
           I  G+  +          T  Y APE+++  G +   D WS+G ++ ++ +G   F T E
Sbjct: 172 IHDGTVTHT------FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGE 224

Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
           N +    ++++L                                    K  L LP     
Sbjct: 225 NRK--KTIDKIL------------------------------------KCKLNLPP---- 242

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
              ++   A    DLL+ LL+ + +SRL      A +   HPFF
Sbjct: 243 ---YLTQEA---RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 76.2 bits (188), Expect = 1e-15
 Identities = 52/256 (20%), Positives = 90/256 (35%), Gaps = 75/256 (29%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRSIK---KYREAAMTEIDVLELLKRY 151
            + ++IG G+FG V        G+    VA+K++       +  +A   E+ VL      
Sbjct: 27  TVGQRIGSGSFGTVY------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT--- 77

Query: 152 DRSGSR----------CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVR 200
                R                       + IV +   G SLY  L  +    F +  + 
Sbjct: 78  -----RHVNILLFMGYSTA--------PQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLI 123

Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
           +I RQ    + ++H   +IH DLK  NI                            L + 
Sbjct: 124 DIARQTARGMDYLHAKSIIHRDLKSNNIF---------------------------LHED 156

Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTR-----HYRAPEVILGLGW---SYPCDMWSVGCILI 312
           + +K+ DFG    + +        +      + APEVI        S+  D+++ G +L 
Sbjct: 157 NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216

Query: 313 ELCSGEALFQTHENLE 328
           EL +G+  +    N +
Sbjct: 217 ELMTGQLPYSNINNRD 232

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 77/338 (22%), Positives = 125/338 (36%), Gaps = 94/338 (27%)

Query: 99  ILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAA--MTEIDVLELLKRYDRS 154
            L+ IG+G+FG+VL    +      A+KV++  +I K +E    M+E +VL         
Sbjct: 42  FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK------- 94

Query: 155 GSRC---VQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
             +    V +   F   + +  V + + G  L  F      R F     R    ++   +
Sbjct: 95  NVKHPFLVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAEIASAL 152

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++H L +++ DLKPENIL  S  ++ + D+               L K +    I+  S
Sbjct: 153 GYLHSLNIVYRDLKPENILLDSQGHIVLTDFG--------------LCKEN----IEHNS 194

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
           T            T  Y APEV+    +    D W +G +L E+  G   F +    E  
Sbjct: 195 TTST------FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-- 246

Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
            M + +L                                       L+L         ++
Sbjct: 247 -MYDNIL------------------------------------NKPLQLKP-------NI 262

Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAH-DAL---KHPFF 424
            +SA     LL+GLL+ D + RL A  D +    H FF
Sbjct: 263 TNSA---RHLLEGLLQKDRTKRLGAKDDFMEIKSHVFF 297

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 76.1 bits (188), Expect = 2e-15
 Identities = 51/246 (20%), Positives = 86/246 (34%), Gaps = 63/246 (25%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--------IKKY-REAAMTEIDVLE 146
            Y++ R +G G  G V +  D      VA+K++            +  REA         
Sbjct: 35  PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREA--------- 85

Query: 147 LLKRYDRSGSR-----CVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVR 200
                 R+  R      V I ++ +    + +   ++ G  L   LR+    P       
Sbjct: 86  ------RTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQ--GPLAPPRAV 137

Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
            I RQ+   +   H     H D+KPENIL                           +   
Sbjct: 138 AIVRQIGSALDAAHAAGATHRDVKPENIL---------------------------VSAD 170

Query: 261 SAIKVIDFG----STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
               ++DFG    +T  +  +    V T +Y APE       +Y  D++++ C+L E  +
Sbjct: 171 DFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLT 230

Query: 317 GEALFQ 322
           G   +Q
Sbjct: 231 GSPPYQ 236

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 76.0 bits (188), Expect = 2e-15
 Identities = 75/342 (21%), Positives = 126/342 (36%), Gaps = 98/342 (28%)

Query: 98  KILRKIGEGTFGQVL---DCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRY 151
           ++L+ +G+G+FG+V         +  +  A+KV++      + R     E D+L  +   
Sbjct: 27  ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-- 84

Query: 152 DRSGSRC---VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
                     V++   F     + ++ + L G  L  F R +    F  + V+    +L 
Sbjct: 85  ------HPFIVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELA 136

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             +  +H L +I+ DLKPENIL     ++K+ D+               L K S    ID
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG--------------LSKES----ID 178

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
               AY          T  Y APEV+   G +   D WS G ++ E+ +G   FQ  +  
Sbjct: 179 HEKKAYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK 232

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
           E    M  +L                                    KA L +P+      
Sbjct: 233 E---TMTMIL------------------------------------KAKLGMPQ------ 247

Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
             +   A     LL+ L + +P++RL        +  +H FF
Sbjct: 248 -FLSPEA---QSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 75.1 bits (185), Expect = 3e-15
 Identities = 50/272 (18%), Positives = 91/272 (33%), Gaps = 84/272 (30%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS---IKKYREAAMTEIDVLELLKRY 151
           +I   IG+G FGQV        G     VAI+++      +   +A   E+         
Sbjct: 36  EIGELIGKGRFGQVY------HGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQT--- 86

Query: 152 DRSGSR----------CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVR 200
                R          C+          H+ I+     G +LY  +R        V+  R
Sbjct: 87  -----RHENVVLFMGACMS-------PPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTR 133

Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
           +I +++++ + ++H   ++H DLK +N+ +         D                    
Sbjct: 134 QIAQEIVKGMGYLHAKGILHKDLKSKNVFY---------DNGK----------------- 167

Query: 261 SAIKVIDFG------STAYEHQEHNYIVS--TRHYRAPEVILGLGWSYP---------CD 303
             + + DFG            +E    +      + APE+I  L               D
Sbjct: 168 --VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSD 225

Query: 304 MWSVGCILIELCSGEALFQTHENLEHLAMMER 335
           ++++G I  EL + E  F+T      +  M  
Sbjct: 226 VFALGTIWYELHAREWPFKTQPAEAIIWQMGT 257

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 74.0 bits (182), Expect = 9e-15
 Identities = 60/359 (16%), Positives = 110/359 (30%), Gaps = 102/359 (28%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR--- 150
           +   ++L     G FG V         E VA+K+     K       E+  L  +K    
Sbjct: 23  SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENI 80

Query: 151 -----YDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGR 204
                 ++ G+              + ++       SL DFL+ N       + +  I  
Sbjct: 81  LQFIGAEKRGT---------SVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAE 128

Query: 205 QLLECVAFMHD----------LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 254
            +   +A++H+            + H D+K +N+L                         
Sbjct: 129 TMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVL------------------------- 163

Query: 255 KRLPKSSAIKVIDFG-----STAYEHQEHNYIVSTRHYRAPEVI-----LGLGWSYPCDM 304
             L  +    + DFG            + +  V TR Y APEV+              DM
Sbjct: 164 --LKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDM 221

Query: 305 WSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIP--QHMLKRVDKPAEKFVRRGRLD 362
           +++G +L EL S           E++   E  +G  P  + M + V        ++ R  
Sbjct: 222 YAMGLVLWELASRCTAA-DGPVDEYMLPFEEEIGQHPSLEDMQEVVV------HKKKRPV 274

Query: 363 WPEGATSRESIKAVLKLPRLQNLVMQH-VDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
             +       +  + +        ++   DH               D  +RL+A    +
Sbjct: 275 LRDYWQKHAGMAMLCET-------IEECWDH---------------DAEARLSAGCVGE 311

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 74.2 bits (183), Expect = 1e-14
 Identities = 74/346 (21%), Positives = 124/346 (35%), Gaps = 98/346 (28%)

Query: 99  ILRKIGEGTFGQVL---DCLDRETGETVAIKVVR-----SIKKYREAAMTEIDVLELLKR 150
           +L+ +G G +G+V         +TG+  A+KV++        K  E   TE  VLE +  
Sbjct: 58  LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI-- 115

Query: 151 YDRSGSRC---VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
                 +    V +   F     + ++ + + G  L+  L +     F    V+    ++
Sbjct: 116 -----RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEI 168

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           +  +  +H L +I+ D+K ENIL  S  ++ + D+               L K     V 
Sbjct: 169 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG--------------LSKEF---VA 211

Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILIELCSGEALFQT- 323
           D    AY+         T  Y AP+++ G   G     D WS+G ++ EL +G + F   
Sbjct: 212 DETERAYD------FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265

Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
            E      +  R+L                                    K+    P+  
Sbjct: 266 GEKNSQAEISRRIL------------------------------------KSEPPYPQ-- 287

Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
                 +   A    DL+Q LL  DP  RL      A +  +H FF
Sbjct: 288 -----EMSALA---KDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 73.2 bits (180), Expect = 2e-14
 Identities = 60/317 (18%), Positives = 107/317 (33%), Gaps = 87/317 (27%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK-----RY- 151
           +++++IG+G +G+V     R  GE VA+KV  + ++      TEI    L++      + 
Sbjct: 40  QMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFI 97

Query: 152 --DRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
             D  G+              + ++ +     SLYD+L+           + ++    + 
Sbjct: 98  AADIKGT---------GSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVS 145

Query: 209 CVAFMHDLRL--------IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
            +  +H             H DLK +NIL                           + K+
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNIL---------------------------VKKN 178

Query: 261 SAIKVIDFGSTAYEHQEHNYI-------VSTRHYRAPEVILGLGWSYP------CDMWSV 307
               + D G       + N +       V T+ Y  PEV+               DM+S 
Sbjct: 179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSF 238

Query: 308 GCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFV-----RRGRLD 362
           G IL E+          E  +           +P H L   D   E        ++ R  
Sbjct: 239 GLILWEVARRCVSGGIVEEYQ-----------LPYHDLVPSDPSYEDMREIVCIKKLRPS 287

Query: 363 WPEGATSRESIKAVLKL 379
           +P   +S E ++ + KL
Sbjct: 288 FPNRWSSDECLRQMGKL 304

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 72.0 bits (177), Expect = 3e-14
 Identities = 48/261 (18%), Positives = 83/261 (31%), Gaps = 71/261 (27%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK-----RY- 151
            +L  +G+G +G+V     +  GE VA+K+  S  +      TE+    +L+      + 
Sbjct: 11  TLLECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFI 68

Query: 152 --DRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
             D +                + ++       SLYD+L+              I   +  
Sbjct: 69  ASDMTSR---------HSSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIAS 116

Query: 209 CVAFMHDLRL--------IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
            +A +H             H DLK +NIL                           + K+
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNIL---------------------------VKKN 149

Query: 261 SAIKVIDFGSTAYEHQEHNYI-------VSTRHYRAPEVILGLGWSYP------CDMWSV 307
               + D G      Q  N +       V T+ Y APEV+               D+W+ 
Sbjct: 150 GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAF 209

Query: 308 GCILIELCSGEALFQTHENLE 328
           G +L E+          E+ +
Sbjct: 210 GLVLWEVARRMVSNGIVEDYK 230

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 70.9 bits (174), Expect = 2e-13
 Identities = 61/245 (24%), Positives = 98/245 (40%), Gaps = 36/245 (14%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
              ++  K+G+G FG+V       T   VAIK ++      EA + E  V++ L      
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL------ 236

Query: 155 GSRCVQIRNWFD--YRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
             R  ++   +       I IV E M   SL DFL+    +   +  + ++  Q+   +A
Sbjct: 237 --RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++  +  +H DL+  NIL       K+ D+ + AR   D  Y  R      IK       
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK------- 346

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHL 330
                          + APE  L   ++   D+WS G +L EL + G   +    N E L
Sbjct: 347 ---------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391

Query: 331 AMMER 335
             +ER
Sbjct: 392 DQVER 396

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 71.0 bits (174), Expect = 2e-13
 Identities = 46/251 (18%), Positives = 97/251 (38%), Gaps = 46/251 (18%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLE---LLKRY 151
           +   +  K+G G +G+V + + ++   TVA+K ++      E  M   + L+   ++K  
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVEEFLKEAAVMKEI 273

Query: 152 D-----RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                 +    C +            I+ E M   +L D+LR+ N +     ++  +  Q
Sbjct: 274 KHPNLVQLLGVCTR-------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 326

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +   + ++     IH +L   N L      +K+ D+ + +R  T   Y         IK 
Sbjct: 327 ISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIK- 384

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH 324
                                + APE +    +S   D+W+ G +L E+ + G + +   
Sbjct: 385 ---------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423

Query: 325 ENLEHLAMMER 335
           +  +   ++E+
Sbjct: 424 DLSQVYELLEK 434

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 68.6 bits (168), Expect = 4e-13
 Identities = 38/254 (14%), Positives = 62/254 (24%), Gaps = 65/254 (25%)

Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
              RY++L   G     Q    LD      VA+  V       +  + +  + E L R  
Sbjct: 29  ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDP-----QGVLPDDVLQETLSRTL 83

Query: 153 RSGS----RCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           R          ++ +    R    +V E + G SL +        P PV  +R   + L 
Sbjct: 84  RLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT---SPSPVGAIR-AMQSLA 139

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
                 H   +  +   P  +  VS +                            + +  
Sbjct: 140 AAADAAHRAGVALSIDHPSRVR-VSID--------------------------GDVVLAY 172

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
                                          +   D+  +G  L  L             
Sbjct: 173 PA-----------------TMPDA-------NPQDDIRGIGASLYALLVNRWPLPEAGVR 208

Query: 328 EHLAMMERVLGPIP 341
             LA  ER     P
Sbjct: 209 SGLAPAERDTAGQP 222

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 69.1 bits (168), Expect = 4e-13
 Identities = 56/313 (17%), Positives = 95/313 (30%), Gaps = 64/313 (20%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---------SIKKYREAAMTEIDV 144
           T + +   KIGEG FG+V           VAIK++          S +K  E  + EI +
Sbjct: 19  TEKLQRCEKIGEGVFGEV--FQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76

Query: 145 LELLKRYDRS------------GSRCVQ-------IRNWFDYRN---------------- 169
            + L                     CVQ       ++ W  Y +                
Sbjct: 77  SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136

Query: 170 -HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPEN 227
             I + FE  G  L     K +     +   + I  QL   +A     LR  H DL   N
Sbjct: 137 LFIVLEFEFGGIDLEQMRTKLS----SLATAKSILHQLTASLAVAEASLRFEHRDLHWGN 192

Query: 228 ILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHY 287
           +L       K+  Y +  +                + +ID+  +  E             
Sbjct: 193 VLLKKTSLKKL-HYTLNGK------SSTIPSCGLQVSIIDYTLSRLERDGIVVFCDV--S 243

Query: 288 RAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKR 347
              ++  G G  Y  D++ +         GE  +  + N+  L  +   +        K 
Sbjct: 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGE--YHPYSNVLWLHYLTDKMLKQMTFKTKC 300

Query: 348 VDKPAEKFVRRGR 360
                ++  R+ +
Sbjct: 301 NTPAMKQIKRKIQ 313

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 69.9 bits (171), Expect = 4e-13
 Identities = 61/245 (24%), Positives = 98/245 (40%), Gaps = 36/245 (14%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
              ++  K+G+G FG+V       T   VAIK ++      EA + E  V++ L      
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKL------ 319

Query: 155 GSRCVQIRNWFD--YRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
             R  ++   +       I IV E M   SL DFL+    +   +  + ++  Q+   +A
Sbjct: 320 --RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 377

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++  +  +H DL+  NIL       K+ D+ + AR   D  Y  R      IK       
Sbjct: 378 YVERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK------- 429

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHL 330
                          + APE  L   ++   D+WS G +L EL + G   +    N E L
Sbjct: 430 ---------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 474

Query: 331 AMMER 335
             +ER
Sbjct: 475 DQVER 479

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 68.1 bits (167), Expect = 7e-13
 Identities = 62/288 (21%), Positives = 108/288 (37%), Gaps = 63/288 (21%)

Query: 98  KILRKIGEGTFGQV----LDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLK-- 149
           K +R +GEG FG+V     D     TGE VA+K ++  S   +      EI++L  L   
Sbjct: 24  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83

Query: 150 ---RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
              +Y   G  C +     D  N I ++ E +   SL ++L KN  +      + +   Q
Sbjct: 84  NIVKY--KGI-CTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL-KYAVQ 134

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           + + + ++   + +H DL   N+L V  E+                           +K+
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARNVL-VESEHQ--------------------------VKI 167

Query: 266 IDFGSTAYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIELCSGEA 319
            DFG T     +  Y              APE ++   +    D+WS G  L EL +   
Sbjct: 168 GDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT--- 224

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRG-RLDWPEG 366
            +   ++      ++ +     Q  + R+       ++ G RL  P  
Sbjct: 225 -YCDSDSSPMALFLKMIGPTHGQMTVTRL----VNTLKEGKRLPCPPN 267

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 68/287 (23%), Positives = 117/287 (40%), Gaps = 61/287 (21%)

Query: 98  KILRKIGEGTFGQV----LDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLK--- 149
           K L+++G+G FG V     D L   TGE VA+K ++ S +++      EI++L+ L+   
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72

Query: 150 --RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
             +Y   G  C         R ++ ++ E +   SL D+L+K+  R   + L+ +   Q+
Sbjct: 73  IVKY--KGV-CYS-----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 123

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
            + + ++   R IH DL   NIL V  E                            +K+ 
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNIL-VENENR--------------------------VKIG 156

Query: 267 DFGSTAYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
           DFG T    Q+  +              APE +    +S   D+WS G +L EL +    
Sbjct: 157 DFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE- 215

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRG-RLDWPEG 366
               ++    A   R++G   Q  +        + ++   RL  P+G
Sbjct: 216 ----KSKSPPAEFMRMIGNDKQGQMIVFH--LIELLKNNGRLPRPDG 256

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 67.4 bits (165), Expect = 1e-12
 Identities = 69/287 (24%), Positives = 117/287 (40%), Gaps = 61/287 (21%)

Query: 98  KILRKIGEGTFGQV----LDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLK--- 149
           K L+++G+G FG V     D L   TGE VA+K ++ S +++      EI++L+ L+   
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103

Query: 150 --RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
             +Y   G  C         R ++ ++ E +   SL D+L+K+  R   + L+ +   Q+
Sbjct: 104 IVKY--KGV-CYS-----AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQI 154

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
            + + ++   R IH DL   NIL V  E                            +K+ 
Sbjct: 155 CKGMEYLGTKRYIHRDLATRNIL-VENENR--------------------------VKIG 187

Query: 267 DFGSTAYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
           DFG T    Q+  Y              APE +    +S   D+WS G +L EL +    
Sbjct: 188 DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE- 246

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRG-RLDWPEG 366
               ++    A   R++G   Q  +        + ++   RL  P+G
Sbjct: 247 ----KSKSPPAEFMRMIGNDKQGQMIVFH--LIELLKNNGRLPRPDG 287

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 66.8 bits (163), Expect = 2e-12
 Identities = 65/355 (18%), Positives = 107/355 (30%), Gaps = 91/355 (25%)

Query: 98  KILRKIGEGTFGQV----LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK---- 149
           K+L  IG G +G V    LD         VA+KV     +        I  + L++    
Sbjct: 16  KLLELIGRGRYGAVYKGSLD------ERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNI 69

Query: 150 ----RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGR 204
                 D   +         D R    +V E     SL  +L  +            +  
Sbjct: 70  ARFIVGDERVTA--------DGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAH 118

Query: 205 QLLECVAFMHD---------LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
            +   +A++H            + H DL   N+L  +     I D+ + +   T     +
Sbjct: 119 SVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL-SMRLTGNRLVR 177

Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-------GWSYPCDMWSVG 308
              + +A                   V T  Y APEV+ G              DM+++G
Sbjct: 178 PGEEDNA---------------AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG 222

Query: 309 CILIELCSGEALFQTHENLEHLAM-MERVLGPIP--QHMLKRVDKPAEKFVRRGRLDWPE 365
            I  E+          E++    M  +  +G  P  + M   V         + R  +PE
Sbjct: 223 LIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVS------REKQRPKFPE 276

Query: 366 GATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
                      L +  L+  +    D                D  +RLTA  A +
Sbjct: 277 AWKENS-----LAVRSLKETIEDCWDQ---------------DAEARLTAQXAEE 311

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 67.4 bits (165), Expect = 2e-12
 Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 32/240 (13%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K+ +K+G G FG+V      +    VA+K ++      EA + E +V++ L+       +
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHT-KVAVKTMKPGSMSVEAFLAEANVMKTLQH-----DK 244

Query: 158 CVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
            V++      +  I I+ E M   SL DFL+ +     P+  + +   Q+ E +AF+   
Sbjct: 245 LVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
             IH DL+  NIL  +    KI D+ + AR   D  Y  R      IK            
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIK------------ 350

Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     + APE I    ++   D+WS G +L+E+ + G   +    N E +  +ER
Sbjct: 351 ----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 400

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 65.4 bits (160), Expect = 5e-12
 Identities = 54/233 (23%), Positives = 88/233 (37%), Gaps = 51/233 (21%)

Query: 98  KILRKIGEGTFGQV----LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL---ELLKR 150
           K + ++G+G FG V     D L   TG  VA+K ++           + D     ++LK 
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH-----SGPDQQRDFQREIQILKA 80

Query: 151 YDRSGSRCVQIRN--WFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
                   V+ R   +   R  + +V E +    L DFL+++  R     L+     Q+ 
Sbjct: 81  LHS--DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL-LYSSQIC 137

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
           + + ++   R +H DL   NIL  S  ++KI                            D
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKIA---------------------------D 170

Query: 268 FGSTAYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIEL 314
           FG       + +Y V     +      APE +    +S   D+WS G +L EL
Sbjct: 171 FGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 64.6 bits (158), Expect = 9e-12
 Identities = 53/264 (20%), Positives = 95/264 (35%), Gaps = 67/264 (25%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGET-------VAIKVVR------SIKKYREAA-MTEID 143
                +G+GTF ++   + RE G+        V +KV+       S   +  A+ M+++ 
Sbjct: 11  IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLS 70

Query: 144 ---VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLV 199
              ++         G  CV         +   +V E +   SL  +L+KN      +  +
Sbjct: 71  HKHLVLNY------GV-CVC-------GDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116

Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
            E+ +QL   + F+ +  LIH ++  +NIL +  E  K  +                   
Sbjct: 117 -EVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF---------------- 159

Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYR------APEVIL-GLGWSYPCDMWSVGCILI 312
              IK+ D G +         ++     +       PE I      +   D WS G  L 
Sbjct: 160 ---IKLSDPGIS-------ITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLW 209

Query: 313 ELCS-GEALFQTHENLEHLAMMER 335
           E+CS G+      ++   L   E 
Sbjct: 210 EICSGGDKPLSALDSQRKLQFYED 233

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 63.1 bits (154), Expect = 3e-11
 Identities = 67/287 (23%), Positives = 110/287 (38%), Gaps = 63/287 (21%)

Query: 98  KILRKIGEGTFGQV----LDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLK-- 149
           K +R +GEG FG+V     D  +  TGE VA+K ++  +  ++R     EID+L  L   
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93

Query: 150 ---RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
              +Y   G  C            + +V E +   SL D+L ++        L+    +Q
Sbjct: 94  HIIKY--KGC-CED-----AGAASLQLVMEYVPLGSLRDYLPRH--SIGLAQLL-LFAQQ 142

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-----RLPKS 260
           + E +A++H    IH DL   N+L  +   +KI D+ +    P    YY+       P  
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP-- 200

Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
             +                       + APE +    + Y  D+WS G  L EL +    
Sbjct: 201 --VF----------------------WYAPECLKEYKFYYASDVWSFGVTLYELLT---- 232

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRG-RLDWPEG 366
                       +E +     Q  + R+     + + RG RL  P+ 
Sbjct: 233 HCDSSQSPPTKFLELIGIAQGQMTVLRL----TELLERGERLPRPDK 275

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 61.8 bits (151), Expect = 5e-11
 Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 38/243 (15%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLE---LLKRYDRS 154
             +++IG G FG V         + VAIK +      RE AM+E D +E   ++ +    
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTI------REGAMSEEDFIEEAEVMMKLSH- 62

Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
             + VQ+      +  IC+V E M    L D+LR          L+  +   + E +A++
Sbjct: 63  -PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLL-GMCLDVCEGMAYL 120

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
            +  +IH DL   N L    + +K+ D+ +  R   D  Y         +K         
Sbjct: 121 EEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVK--------- 170

Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAM 332
                        + +PEV     +S   D+WS G ++ E+ S G+  ++   N E +  
Sbjct: 171 -------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 217

Query: 333 MER 335
           +  
Sbjct: 218 IST 220

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 61.5 bits (150), Expect = 9e-11
 Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 48/251 (19%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
              K++ ++G G FG+V           VA+K ++      +A + E ++++ L+     
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHT-KVAVKSLKQGSMSPDAFLAEANLMKQLQH---- 67

Query: 155 GSRCVQIRNWFDY----RNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             R V++     Y    +  I I+ E M   SL DFL+  +     ++ + ++  Q+ E 
Sbjct: 68  -QRLVRL-----YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR----LPKSSAIKV 265
           +AF+ +   IH DL+  NIL       KI D+ + AR   D  Y  R     P    IK 
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFP----IK- 175

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH 324
                                + APE I    ++   D+WS G +L E+ + G   +   
Sbjct: 176 ---------------------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214

Query: 325 ENLEHLAMMER 335
            N E +  +ER
Sbjct: 215 TNPEVIQNLER 225

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 61.5 bits (150), Expect = 9e-11
 Identities = 48/255 (18%), Positives = 99/255 (38%), Gaps = 54/255 (21%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLE---LLKRY 151
           +   +  K+G G +G+V + + ++   TVA+K ++      E  M   + L+   ++K  
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVEEFLKEAAVMKEI 66

Query: 152 D-----RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                 +    C +            I+ E M   +L D+LR+ N +     ++  +  Q
Sbjct: 67  KHPNLVQLLGVCTR-------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK----RLPKSS 261
           +   + ++     IH DL   N L      +K+ D+ + +R  T   Y      + P   
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFP--- 175

Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL 320
            IK                      + APE +    +S   D+W+ G +L E+ + G + 
Sbjct: 176 -IK----------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212

Query: 321 FQTHENLEHLAMMER 335
           +   +  +   ++E+
Sbjct: 213 YPGIDLSQVYELLEK 227

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 40/244 (16%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLE---LLKRYDR 153
            +L+++G G FG V   L +  G+  VA+K+++      E +M+E +  +    + +   
Sbjct: 11  TLLKELGSGQFGVV--KLGKWKGQYDVAVKMIK------EGSMSEDEFFQEAQTMMKLSH 62

Query: 154 SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
              + V+          I IV E +    L ++LR +     P  L+ E+   + E +AF
Sbjct: 63  P--KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL-EMCYDVCEGMAF 119

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +   + IH DL   N L      +K+ D+ +  R   D  Y   +     +K        
Sbjct: 120 LESHQFIHRDLAARNCLVDRDLCVKVSDFGM-TRYVLDDQYVSSVGTKFPVK-------- 170

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLA 331
                         + APEV     +S   D+W+ G ++ E+ S G+  +  + N E + 
Sbjct: 171 --------------WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL 216

Query: 332 MMER 335
            + +
Sbjct: 217 KVSQ 220

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 60.4 bits (147), Expect = 4e-10
 Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 51/231 (22%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKY-REAA-MTEID---VLE 146
              K+L+ IG+G FG V   L    G  VA+K ++   + + +  EA+ MT++    +++
Sbjct: 193 KELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQ 250

Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
           LL      G   V+       +  + IV E M   SL D+LR         D + +    
Sbjct: 251 LL------GV-IVE------EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 297

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           + E + ++     +H DL   N+L       K+ D+ +  +  +      +LP    +K 
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL-TKEASSTQDTGKLP----VK- 351

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                                + APE +    +S   D+WS G +L E+ S
Sbjct: 352 ---------------------WTAPEALREKKFSTKSDVWSFGILLWEIYS 381

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 60.3 bits (146), Expect = 5e-10
 Identities = 57/254 (22%), Positives = 95/254 (37%), Gaps = 55/254 (21%)

Query: 98  KILRKIGEGTFGQV---LDCLDRETGETVAIKVVRS-------IKKYREAA-MTEID--- 143
           ++ R IGEG FG V   +          VAIK  ++        K  +EA  M + D   
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 452

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
           +++L+      G    +        N + I+ E      L  FL+   +      L+   
Sbjct: 453 IVKLI------GV-ITE--------NPVWIIMELCTLGELRSFLQVRKFSLDLASLI-LY 496

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
             QL   +A++   R +H D+   N+L  S + +K+ D+   +R   D  YYK       
Sbjct: 497 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF-GLSRYMEDSTYYKASKGKLP 555

Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALF 321
           IK                      + APE I    ++   D+W  G  + E+   G   F
Sbjct: 556 IK----------------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593

Query: 322 QTHENLEHLAMMER 335
           Q  +N + +  +E 
Sbjct: 594 QGVKNNDVIGRIEN 607

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 58.8 bits (143), Expect = 6e-10
 Identities = 51/248 (20%), Positives = 103/248 (41%), Gaps = 48/248 (19%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLE---LLKRYDR 153
             L+++G G FG V     +  G+  VAIK+++      E +M+E + +E   ++     
Sbjct: 27  TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSH 78

Query: 154 SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
              + VQ+      +  I I+ E M    L ++LR+  +R     L+ E+ + + E + +
Sbjct: 79  E--KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL-EMCKDVCEAMEY 135

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR----LPKSSAIKVIDF 268
           +   + +H DL   N L      +K+ D+ + +R   D  Y        P    ++    
Sbjct: 136 LESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRYVLDDEYTSSVGSKFP----VR---- 186

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL 327
                             +  PEV++   +S   D+W+ G ++ E+ S G+  ++   N 
Sbjct: 187 ------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 228

Query: 328 EHLAMMER 335
           E    + +
Sbjct: 229 ETAEHIAQ 236

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 58.8 bits (143), Expect = 6e-10
 Identities = 56/249 (22%), Positives = 94/249 (37%), Gaps = 45/249 (18%)

Query: 98  KILRKIGEGTFGQV---LDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYD 152
           ++ R IGEG FG V   +          VAIK  +  +    RE  + E      ++++D
Sbjct: 18  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA---LTMRQFD 74

Query: 153 RSGSRCVQIRNWFDY----RNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
                 V++           N + I+ E      L  FL+   Y      L+     QL 
Sbjct: 75  HP--HIVKL-----IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLS 126

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             +A++   R +H D+   N+L  S + +K+ D+ + +R   D  YYK       IK   
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL-SRYMEDSTYYKASKGKLPIK--- 182

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHEN 326
                              + APE I    ++   D+W  G  + E+   G   FQ  +N
Sbjct: 183 -------------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 223

Query: 327 LEHLAMMER 335
            + +  +E 
Sbjct: 224 NDVIGRIEN 232

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 59.2 bits (144), Expect = 7e-10
 Identities = 57/260 (21%), Positives = 96/260 (36%), Gaps = 64/260 (24%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS-------IKKYREAA-MTEID--- 143
            I + IG G  G+V     R  G+    VAIK +++            EA+ M + D   
Sbjct: 52  HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
           ++ L            +            IV E M   SL  FLR ++ +   + LV  +
Sbjct: 112 IIRLE-------GVVTR-------GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV-GM 156

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            R +   + ++ DL  +H DL   N+L V    +                          
Sbjct: 157 LRGVGAGMRYLSDLGYVHRDLAARNVL-VDSNLV-------------------------- 189

Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIELCS 316
            KV DFG +     + +   +T   +      APE I    +S   D+WS G ++ E+ +
Sbjct: 190 CKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

Query: 317 -GEALFQTHENLEHLAMMER 335
            GE  +    N + ++ +E 
Sbjct: 250 YGERPYWNMTNRDVISSVEE 269

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 59.2 bits (144), Expect = 7e-10
 Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 57/256 (22%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K ++ +G G FG V   L    GE V I V  +IK+ REA   +    E+L         
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPK-ANKEILDE------- 67

Query: 158 CVQIRNWFDYRN-----------HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
              +    D  +            + ++ + M    L D++R++        L+     Q
Sbjct: 68  -AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-NWCVQ 125

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS-PTDVNYYK----RLPKS 260
           + + + ++ D RL+H DL   N+L  +P+++KI D+ + A+    +   Y     ++P  
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVP-- 182

Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEA 319
             IK                      + A E IL   +++  D+WS G  + EL + G  
Sbjct: 183 --IK----------------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218

Query: 320 LFQTHENLEHLAMMER 335
            +      E  +++E+
Sbjct: 219 PYDGIPASEISSILEK 234

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 59.2 bits (144), Expect = 9e-10
 Identities = 54/248 (21%), Positives = 86/248 (34%), Gaps = 44/248 (17%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRSG 155
            +  +IG G FG+V     R     VA+K  R       +   + E     +LK+Y    
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEA---RILKQYSHP- 172

Query: 156 SRCVQIRNWFDY-----RNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
              V++           +  I IV E + G     FLR    R     L+ ++       
Sbjct: 173 -NIVRL-----IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLL-QMVGDAAAG 225

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA-IKVIDF 268
           + ++     IH DL   N L      LKI D+ + +R   D  Y          +K    
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGM-SREEADGVYAASGGLRQVPVK---- 280

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL 327
                             + APE +    +S   D+WS G +L E  S G + +    N 
Sbjct: 281 ------------------WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ 322

Query: 328 EHLAMMER 335
           +    +E+
Sbjct: 323 QTREFVEK 330

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 52/251 (20%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKY-REAA-MTEID---VLE 146
              K+L+ IG+G FG V   L    G  VA+K ++   + + +  EA+ MT++    +++
Sbjct: 21  KELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQ 78

Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
           LL      G   V+       +  + IV E M   SL D+LR         D + +    
Sbjct: 79  LL------GV-IVE------EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 125

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           + E + ++     +H DL   N+L       K+ D+ +  +  +      +LP    +K 
Sbjct: 126 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL-TKEASSTQDTGKLP----VK- 179

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH 324
                                + APE +    +S   D+WS G +L E+ S G   +   
Sbjct: 180 ---------------------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 218

Query: 325 ENLEHLAMMER 335
              + +  +E+
Sbjct: 219 PLKDVVPRVEK 229

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 53/253 (20%)

Query: 98  KILRKIGEGTFGQVLD--CLDRETGET-VAIKVVR--SIKKYREAAMTEIDVLELLKRYD 152
            + R +GEG FG+V +    + +  +  VA+K  +       +E  M+E  ++   K  D
Sbjct: 15  VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM---KNLD 71

Query: 153 RSGSRCVQIRNWFDY----RNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
                 V++               I+ E      L  +L +N      + LV     Q+ 
Sbjct: 72  HP--HIVKL-----IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLV-LYSLQIC 123

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK----RLPKSSAI 263
           + +A++  +  +H D+   NIL  SPE +K+ D+ + +R   D +YYK    RLP    I
Sbjct: 124 KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL-SRYIEDEDYYKASVTRLP----I 178

Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQ 322
           K                      + +PE I    ++   D+W     + E+ S G+  F 
Sbjct: 179 K----------------------WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 216

Query: 323 THENLEHLAMMER 335
             EN + + ++E+
Sbjct: 217 WLENKDVIGVLEK 229

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 57.6 bits (140), Expect = 1e-09
 Identities = 51/251 (20%), Positives = 92/251 (36%), Gaps = 54/251 (21%)

Query: 101 RKIGEGTFGQVLD-CLDRETGET-VAIKVVR--SIKKYREAAMTEIDVLELLKRYDRSGS 156
            ++G G FG V          +  VAIKV++  + K   E  M E  ++    + D    
Sbjct: 16  IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIM---HQLDNP-- 70

Query: 157 RCVQIRNWFDY----RNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
             V++             + +V E   G  L+ FL          ++  E+  Q+   + 
Sbjct: 71  YIVRL-----IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-ELLHQVSMGMK 124

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++ +   +H DL   N+L V+  Y                            K+ DFG +
Sbjct: 125 YLEEKNFVHRDLAARNVLLVNRHY---------------------------AKISDFGLS 157

Query: 272 AYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH 324
                + +Y  +    +      APE I    +S   D+WS G  + E  S G+  ++  
Sbjct: 158 KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217

Query: 325 ENLEHLAMMER 335
           +  E +A +E+
Sbjct: 218 KGPEVMAFIEQ 228

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 57/260 (21%), Positives = 101/260 (38%), Gaps = 58/260 (22%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVR--SIKKYR-----EAA-MTEID 143
           +   I + +G G FG+V     +   +   +VAIK ++    +K R     EA+ M + D
Sbjct: 45  TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
              +++          +          + IV E M   SL  FLRK++ +   + LV  +
Sbjct: 105 HPNIIRLE----GVVTK-------SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV-GM 152

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            R +   + ++ D+  +H DL   NIL                     +N       +  
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNIL---------------------IN------SNLV 185

Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIELCS 316
            KV DFG       +     +TR  +      +PE I    ++   D+WS G +L E+ S
Sbjct: 186 CKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

Query: 317 -GEALFQTHENLEHLAMMER 335
            GE  +    N + +  ++ 
Sbjct: 246 YGERPYWEMSNQDVIKAVDE 265

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 51/254 (20%), Positives = 88/254 (34%), Gaps = 60/254 (23%)

Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
           +++G G FG V         + V   V  ++K  +  A       ELL            
Sbjct: 23  KELGSGNFGTV--KKGYYQMKKVVKTV--AVKILKNEANDPALKDELLAE--------AN 70

Query: 161 IRNWFDYRN-----------HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
           +    D                 +V E      L  +L++N  R      + E+  Q+  
Sbjct: 71  VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSM 128

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++ +   +H DL   N+L V+  Y                            K+ DF
Sbjct: 129 GMKYLEESNFVHRDLAARNVLLVTQHY---------------------------AKISDF 161

Query: 269 GSTAYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIELCS-GEALF 321
           G +     + NY  +  H +      APE I    +S   D+WS G ++ E  S G+  +
Sbjct: 162 GLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221

Query: 322 QTHENLEHLAMMER 335
           +  +  E  AM+E+
Sbjct: 222 RGMKGSEVTAMLEK 235

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 56.2 bits (136), Expect = 6e-09
 Identities = 50/257 (19%), Positives = 91/257 (35%), Gaps = 51/257 (19%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           S     + IG G FG+V   + + +     + V  +IK  +     +   ++ L      
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPV--AIKTLKAGYTEK-QRVDFLGE---- 96

Query: 155 GSRCVQIRNWFDYRN------------HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVRE 201
                 I   F + N             + I+ E M   +L  FLR+ +     + LV  
Sbjct: 97  ----AGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLV-G 151

Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
           + R +   + ++ ++  +H DL   NIL  S    K+ D+ + +R   D           
Sbjct: 152 MLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGL-SRVLEDDPEATYTTSGG 210

Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYR--APEVILGLGWSYPCDMWSVGCILIELCS-GE 318
            I +                      R  APE I    ++   D+WS G ++ E+ + GE
Sbjct: 211 KIPI----------------------RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE 248

Query: 319 ALFQTHENLEHLAMMER 335
             +    N E +  +  
Sbjct: 249 RPYWELSNHEVMKAIND 265

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 55.7 bits (135), Expect = 8e-09
 Identities = 40/180 (22%), Positives = 62/180 (34%), Gaps = 30/180 (16%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRSIKKY-------REAA-MTEID--- 143
                IG G FG V      +        A+K +  I           E   M +     
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
           VL LL      G  C              +V   M    L +F+R   + P   DL+   
Sbjct: 88  VLSLL------GI-C------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-F 133

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
           G Q+ + + ++   + +H DL   N +      +K+ D+ + AR   D  YY    K+ A
Sbjct: 134 GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNKTGA 192

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 55.7 bits (135), Expect = 8e-09
 Identities = 53/257 (20%), Positives = 98/257 (38%), Gaps = 57/257 (22%)

Query: 98  KILRKIGEGTFGQVLD-CLDRETGET--VAIKVVR----SIKKYREAAMTEIDVLELLKR 150
           ++L K+G+G+FG V     D  +G+T  VA+K ++    S  +  +  + E++ +     
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM---HS 77

Query: 151 YDRSGSRCVQIRNWFDY----RNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
            D      +++     Y       + +V E     SL D LRK+        L      Q
Sbjct: 78  LDHR--NLIRL-----YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQ 129

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           + E + ++   R IH DL   N+L  + +                            +K+
Sbjct: 130 VAEGMGYLESKRFIHRDLAARNLLLATRDL---------------------------VKI 162

Query: 266 IDFGSTAYEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIELCS-GE 318
            DFG      Q  ++ V   H +      APE +    +S+  D W  G  L E+ + G+
Sbjct: 163 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222

Query: 319 ALFQTHENLEHLAMMER 335
             +      + L  +++
Sbjct: 223 EPWIGLNGSQILHKIDK 239

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 55/255 (21%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
           K ++ +G G FG V   L    GE V I V  +IK+ REA   +    E+L         
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPK-ANKEILDE------- 67

Query: 158 CVQIRNWFDYRN-----------HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
              +    D  +            + ++ + M    L D++R++        L+     Q
Sbjct: 68  -AYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-NWCVQ 125

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK----RLPKSS 261
           + + + ++ D RL+H DL   N+L  +P+++KI D+ +      +   Y     ++P   
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 182

Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL 320
            IK                      + A E IL   +++  D+WS G  + EL + G   
Sbjct: 183 -IK----------------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219

Query: 321 FQTHENLEHLAMMER 335
           +      E  +++E+
Sbjct: 220 YDGIPASEISSILEK 234

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 32/174 (18%), Positives = 67/174 (38%), Gaps = 24/174 (13%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           +  + L+ +G G FG V   +    GE++ I V   IK   + +        +       
Sbjct: 13  TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPV--CIKVIEDKS-GRQSFQAVTDH---- 65

Query: 155 GSRCVQIRNWFDYRN-----------HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
               +      D+ +            + +V + +   SL D +R++     P  L+   
Sbjct: 66  ----MLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLL-NW 120

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
           G Q+ + + ++ +  ++H +L   N+L  SP  +++ D+ V    P D      
Sbjct: 121 GVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 174

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 55.3 bits (133), Expect = 2e-08
 Identities = 51/250 (20%), Positives = 91/250 (36%), Gaps = 54/250 (21%)

Query: 102 KIGEGTFGQVLD-CLDRETGET-VAIKVVR--SIKKYREAAMTEIDVLELLKRYDRSGSR 157
           ++G G FG V          +  VAIKV++  + K   E  M E  ++  L         
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN-----PY 397

Query: 158 CVQIRNWFDY----RNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
            V++             + +V E   G  L+ FL          ++  E+  Q+   + +
Sbjct: 398 IVRL-----IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-ELLHQVSMGMKY 451

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           + +   +H +L   N+L V+  Y KI                            DFG + 
Sbjct: 452 LEEKNFVHRNLAARNVLLVNRHYAKIS---------------------------DFGLSK 484

Query: 273 YEHQEHNYIVSTRHYR------APEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHE 325
               + +Y  +    +      APE I    +S   D+WS G  + E  S G+  ++  +
Sbjct: 485 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544

Query: 326 NLEHLAMMER 335
             E +A +E+
Sbjct: 545 GPEVMAFIEQ 554

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 56/255 (21%), Positives = 87/255 (34%), Gaps = 68/255 (26%)

Query: 95  SRYKILRKIGEGTFGQV-----LDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLEL 147
           +R    + +G G FG+V        +  +   TVA+K+++  +    REA M+E+ VL  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 148 LKRYDR----SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
           L  +       G+ C              ++ E      L +FLR+             I
Sbjct: 83  LGNHMNIVNLLGA-CTI-------GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI 134

Query: 203 G---------RQLLEC-------VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
                       LL         +AF+     IH DL   NIL ++   +          
Sbjct: 135 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL-LTHGRI---------- 183

Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR-----APEVILGLGWSYP 301
                            K+ DFG       + NY+V           APE I    +++ 
Sbjct: 184 ----------------TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE 227

Query: 302 CDMWSVGCILIELCS 316
            D+WS G  L EL S
Sbjct: 228 SDVWSYGIFLWELFS 242

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 50.9 bits (122), Expect = 3e-07
 Identities = 33/158 (20%), Positives = 51/158 (32%), Gaps = 29/158 (18%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRSIKKY-------REAA-MTEID--- 143
                IG G FG V      +        A+K +  I           E   M +     
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
           VL LL      G                 +V   M    L +F+R   + P   DL+   
Sbjct: 152 VLSLL------G--IC-----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-F 197

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD 240
           G Q+ + + F+   + +H DL   N +      +K+ D
Sbjct: 198 GLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 235

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 39/180 (21%), Positives = 63/180 (35%), Gaps = 30/180 (16%)

Query: 98  KILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRSIKKY-------REAA-MTEID--- 143
              R IG+G FG V      +  +     AIK +  I +        RE   M  ++   
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
           VL L+      G                 ++   M    L  F+R     P   DL+   
Sbjct: 84  VLALI------GI-M------LPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLI-SF 129

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
           G Q+   + ++ + + +H DL   N +      +K+ D+ + AR   D  YY       A
Sbjct: 130 GLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGL-ARDILDREYYSVQQHRHA 188

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 34/191 (17%), Positives = 69/191 (36%), Gaps = 38/191 (19%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRSIKKYREAAMTEIDVLELL--- 148
            ++ + R +G+G FG V +   ++       VA+K+++         +   D+ E L   
Sbjct: 23  QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK------ADIIASSDIEEFLREA 76

Query: 149 ---KRYDRS------GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRK-----NNYRP 193
              K +D        G                 ++   M    L+ FL       N +  
Sbjct: 77  ACMKEFDHPHVAKLVG--VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134

Query: 194 FPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEY-LKIPDYKVTARSPTDVN 252
               LVR     +   + ++     IH DL   N + ++ +  + + D+ + +R     +
Sbjct: 135 PLQTLVR-FMVDIACGMEYLSSRNFIHRDLAARNCM-LAEDMTVCVADFGL-SRKIYSGD 191

Query: 253 YYK-----RLP 258
           YY+     +LP
Sbjct: 192 YYRQGCASKLP 202

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 38/192 (19%), Positives = 67/192 (34%), Gaps = 46/192 (23%)

Query: 95  SRYKILRKIGEGTFGQV-----LDCLDRETGETVAIKVVRSIKKY------REAA-MTEI 142
               +  ++GEG FG+V      + L  +    VA+K ++   +       REA  +T +
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 100

Query: 143 D---VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDL 198
               ++         G  C +          + +VFE M    L  FLR +      +  
Sbjct: 101 QHQHIVRFF------GV-CTE-------GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 146

Query: 199 VREIGRQLLECVAFMH-------------DLRLIHTDLKPENILFVSPEY-LKIPDYKVT 244
             ++    L     +               L  +H DL   N L V     +KI D+ + 
Sbjct: 147 GEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL-VGQGLVVKIGDFGM- 204

Query: 245 ARSPTDVNYYKR 256
           +R     +YY+ 
Sbjct: 205 SRDIYSTDYYRV 216

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 41/192 (21%), Positives = 75/192 (39%), Gaps = 47/192 (24%)

Query: 98  KILRKIGEGTFGQV-----LDCLDRETGETVAIKVVRS-------IKKYREAA-MTEID- 143
            + R++G+G+FG V        +  E    VAIK V         I+   EA+ M E + 
Sbjct: 28  TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC 87

Query: 144 --VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVR 200
             V+ LL      G    Q            ++ E M    L  +LR          ++ 
Sbjct: 88  HHVVRLL------GV-VSQ-------GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133

Query: 201 EIG-RQLLECV-------AFMHDLRLIHTDLKPENILFVSPEY-LKIPDYKVTARSPTDV 251
                ++++         A+++  + +H DL   N + V+ ++ +KI D+ +  R   + 
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM-VAEDFTVKIGDFGM-TRDIYET 191

Query: 252 NYYK-----RLP 258
           +YY+      LP
Sbjct: 192 DYYRKGGKGLLP 203

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 49/251 (19%), Positives = 91/251 (36%), Gaps = 64/251 (25%)

Query: 95  SRYKILRKIGEGTFGQV-----LDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLEL 147
           +  +  + +G G FG+V           +    VA+K+++  +    +EA M+E+ ++  
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105

Query: 148 LKRYDR----SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
           L +++      G+ C            + ++ E      L +FLR+ +            
Sbjct: 106 LGQHENIVNLLGA-CTH-------GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157

Query: 203 G-----RQLLEC-------VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
                 R LL         +AF+     IH D+   N+L ++  ++              
Sbjct: 158 NSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL-LTNGHV-------------- 202

Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTR-----HYRAPEVILGLGWSYPCDMW 305
                        K+ DFG       + NYIV         + APE I    ++   D+W
Sbjct: 203 ------------AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVW 250

Query: 306 SVGCILIELCS 316
           S G +L E+ S
Sbjct: 251 SYGILLWEIFS 261

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 47.8 bits (114), Expect = 4e-06
 Identities = 48/251 (19%), Positives = 81/251 (32%), Gaps = 69/251 (27%)

Query: 95  SRYKILRKIGEGTFGQV----LDCLDRETGET-VAIKVVRS-------IKKYREAA-MTE 141
               ++R +G G FG+V    +  +  +     VA+K +         +    EA  +++
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130

Query: 142 ID---VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVD 197
            +   ++  +      G   +Q            I+ E M G  L  FLR+   RP P  
Sbjct: 131 FNHQNIVRCI------GV-SLQ-------SLPRFILLELMAGGDLKSFLRET--RPRPSQ 174

Query: 198 LVREIGRQLLECV-------AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
                   LL           ++ +   IH D+   N L             +T   P  
Sbjct: 175 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL-------------LTCPGPGR 221

Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR-----APEVILGLGWSYPCDMW 305
           V            K+ DFG     ++   Y              PE  +   ++   D W
Sbjct: 222 V-----------AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 270

Query: 306 SVGCILIELCS 316
           S G +L E+ S
Sbjct: 271 SFGVLLWEIFS 281

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 48/251 (19%), Positives = 81/251 (32%), Gaps = 69/251 (27%)

Query: 95  SRYKILRKIGEGTFGQV----LDCLDRETGET-VAIKVVRS-------IKKYREAA-MTE 141
               ++R +G G FG+V    +  +  +     VA+K +         +    EA  +++
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89

Query: 142 ID---VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVD 197
            +   ++  +      G   +Q            I+ E M G  L  FLR+   RP P  
Sbjct: 90  FNHQNIVRCI------GV-SLQ-------SLPRFILMELMAGGDLKSFLRET--RPRPSQ 133

Query: 198 LVREIGRQLLECV-------AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
                   LL           ++ +   IH D+   N L             +T   P  
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL-------------LTCPGPGR 180

Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR-----APEVILGLGWSYPCDMW 305
           V            K+ DFG     ++   Y              PE  +   ++   D W
Sbjct: 181 V-----------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229

Query: 306 SVGCILIELCS 316
           S G +L E+ S
Sbjct: 230 SFGVLLWEIFS 240

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 46.5 bits (111), Expect = 8e-06
 Identities = 51/193 (26%), Positives = 72/193 (37%), Gaps = 42/193 (21%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGE--TVAIKVVRSI--KKYREAAMTEIDVLELLKR 150
           +  K    IGEG FGQVL    ++ G     AIK ++    K        E++VL  L  
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84

Query: 151 YDR----SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIG-- 203
           +       G+ C         R ++ +  E     +L DFLRK+                
Sbjct: 85  HPNIINLLGA-CEH-------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 136

Query: 204 -----RQLLEC---VA----FMHDLRLIHTDLKPENILFVSPEY-LKIPDYKVTARSPTD 250
                +QLL     VA    ++   + IH DL   NIL V   Y  KI D+ + +R    
Sbjct: 137 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL-VGENYVAKIADFGL-SR---G 191

Query: 251 VNYYK-----RLP 258
              Y      RLP
Sbjct: 192 QEVYVKKTMGRLP 204

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 46.1 bits (110), Expect = 9e-06
 Identities = 32/195 (16%), Positives = 64/195 (32%), Gaps = 51/195 (26%)

Query: 95  SRYKILRKIGEGTFGQV-----LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
               + R++GEG FG+V      +    +    VA+K +      ++  +      +  +
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL------KDPTLAA--RKDFQR 66

Query: 150 RYDRSGSRCVQIRNWFDYRNHI------------CIVFE-MLGPSLYDFLRKNNYRPFPV 196
                     ++     + + +             +VFE M    L  FLR +      +
Sbjct: 67  E--------AELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMIL 118

Query: 197 DLVREIGR-------QLLECV-------AFMHDLRLIHTDLKPENILFVSPEY-LKIPDY 241
              +           Q+L           ++     +H DL   N L V     +KI D+
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCL-VGANLLVKIGDF 177

Query: 242 KVTARSPTDVNYYKR 256
            + +R     +YY+ 
Sbjct: 178 GM-SRDVYSTDYYRV 191

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 45/202 (22%), Positives = 73/202 (36%), Gaps = 53/202 (26%)

Query: 95  SRYKILRKIGEGTFGQV-----LDCLDRETGETVAIKVVR---SIKKY----REAA-MTE 141
            R K+ + +G G FGQV            T  TVA+K+++   +  ++     E   +  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86

Query: 142 ID----VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPV 196
           I     V+ LL      G+ C +          + ++ E     +L  +LR       P 
Sbjct: 87  IGHHLNVVNLL------GA-CTKP------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133

Query: 197 DLVREIG-------RQLLECV-------AFMHDLRLIHTDLKPENILFVSPEY-LKIPDY 241
            +  E           L+           F+   + IH DL   NIL +S +  +KI D+
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL-LSEKNVVKICDF 192

Query: 242 KVTARSPTDVNYYK-----RLP 258
            + AR       Y      RLP
Sbjct: 193 GL-ARDIYKDPDYVRKGDARLP 213

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 48/200 (24%)

Query: 95  SRYKILRKIGEGTFGQV-------LDCLDRETGETVAIKVVRSIKKYREAA--MTEIDVL 145
            +  + + +GEG FGQV       +D    +   TVA+K+++     ++ +  ++E++++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 146 ELLKRYDR----SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVR 200
           +++ ++       G+ C Q          + ++ E     +L ++LR    RP  ++   
Sbjct: 95  KMIGKHKNIINLLGA-CTQ-------DGPLYVIVEYASKGNLREYLRAR--RPPGMEYSY 144

Query: 201 EIG---------RQLLECV-------AFMHDLRLIHTDLKPENILFVSPEY-LKIPDYKV 243
           +I          + L+ C         ++   + IH DL   N+L V+    +KI D+ +
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL-VTENNVMKIADFGL 203

Query: 244 TARSPTDVNYYK-----RLP 258
            AR   +++YYK     RLP
Sbjct: 204 -ARDINNIDYYKKTTNGRLP 222

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 37/204 (18%), Positives = 63/204 (30%), Gaps = 59/204 (28%)

Query: 95  SRYKILRKIGEGTFGQV-----LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
           S  + + ++GE  FG+V           E  + VAIK +      ++ A       E   
Sbjct: 9   SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL------KDKAE-GPLREEFRH 61

Query: 150 RYDRSGSRCVQIRNWFDYRNHI------------CIVFE-MLGPSLYDFLRKNNYRPFPV 196
                      +R    + N +             ++F       L++FL      P   
Sbjct: 62  E--------AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMR--SPHSD 111

Query: 197 DLVREIGR---------QLLECV-------AFMHDLRLIHTDLKPENILFVSPEYL-KIP 239
               +  R           +  V        ++    ++H DL   N+L V  +   KI 
Sbjct: 112 VGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL-VYDKLNVKIS 170

Query: 240 DYKVTARSPTDVNYYK-----RLP 258
           D  +  R     +YYK      LP
Sbjct: 171 DLGL-FREVYAADYYKLLGNSLLP 193

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 33/191 (17%), Positives = 73/191 (38%), Gaps = 39/191 (20%)

Query: 95  SRYKILRKIGEGTFGQVLDCL---DRETGETVAIKVVR----SIKKY----REAA-MTEI 142
           +   + + +GEG FG V++     +  T   VA+K ++    S ++      EAA M + 
Sbjct: 34  NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93

Query: 143 D---VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFP--- 195
               V+ LL          V I           ++   M    L+ +L  +     P   
Sbjct: 94  SHPNVIRLL---------GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI 144

Query: 196 --VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEY-LKIPDYKVTARSPTDVN 252
               L++     +   + ++ +   +H DL   N + +  +  + + D+ + ++     +
Sbjct: 145 PLQTLLK-FMVDIALGMEYLSNRNFLHRDLAARNCM-LRDDMTVCVADFGL-SKKIYSGD 201

Query: 253 YYK-----RLP 258
           YY+     ++P
Sbjct: 202 YYRQGRIAKMP 212

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 3e-05
 Identities = 64/377 (16%), Positives = 109/377 (28%), Gaps = 132/377 (35%)

Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
           LT+R+K           QV D L   T   +++        +    +T  +V  LL    
Sbjct: 270 LTTRFK-----------QVTDFLSAATTTHISLD-------HHSMTLTPDEVKSLL---- 307

Query: 153 RSGSRCVQIRNWFDYRNHIC----IVFEMLGPSLYDFL-RKNNYRPFPVDLVREIGRQLL 207
               + +  R   D    +         ++  S+ D L   +N++    D +  I    L
Sbjct: 308 ---LKYLDCRP-QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363

Query: 208 ECVAFMHDLRLIHTDLKPENI------LFVSPEYLKIPDYKVTARSPTDVNYY------K 255
                          L+P         L V P    IP   + +    DV          
Sbjct: 364 NV-------------LEPAEYRKMFDRLSVFPPSAHIP-TILLSLIWFDVIKSDVMVVVN 409

Query: 256 RLPKSSAIKVIDFGSTAYEH--------------QEHNYIVSTRHYRAPEVILGLGWSYP 301
           +L K S ++     ST                    H  IV   HY  P+       ++ 
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD--HYNIPK-------TFD 460

Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFV--RRG 359
            D      I   L   +  F +H               I  H+     +  E+    R  
Sbjct: 461 SD----DLIPPYL---DQYFYSH---------------IGHHLKNI--EHPERMTLFRMV 496

Query: 360 RLD--WPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHD 417
            LD  +         ++   K+ R  +        ++G +++ LQ L  Y P      + 
Sbjct: 497 FLDFRF---------LEQ--KI-RHDSTAWN----ASGSILNTLQQLKFYKP------YI 534

Query: 418 ALKHPFFTR--DYYRRF 432
               P + R  +    F
Sbjct: 535 CDNDPKYERLVNAILDF 551

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 43.9 bits (104), Expect = 6e-05
 Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 48/197 (24%)

Query: 98  KILRKIGEGTFGQV-------LDCLDRETGETVAIKVVRSIKKYREAA--MTEIDVLELL 148
            + + +GEG FGQV       +D    +   TVA+K+++     ++ +  ++E+++++++
Sbjct: 84  TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 143

Query: 149 KRYDR----SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIG 203
            ++       G+ C Q          + ++ E     +L ++LR    RP  ++   +I 
Sbjct: 144 GKHKNIINLLGA-CTQ-------DGPLYVIVEYASKGNLREYLRAR--RPPGMEYSYDIN 193

Query: 204 ---------RQLLECV-------AFMHDLRLIHTDLKPENILFVSPEY-LKIPDYKVTAR 246
                    + L+ C         ++   + IH DL   N+L V+    +KI D+ + AR
Sbjct: 194 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL-VTENNVMKIADFGL-AR 251

Query: 247 SPTDVNYYK-----RLP 258
              +++YYK     RLP
Sbjct: 252 DINNIDYYKKTTNGRLP 268

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 43.9 bits (104), Expect = 7e-05
 Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 48/200 (24%)

Query: 95  SRYKILRKIGEGTFGQV-------LDCLDRETGETVAIKVVRSIKKYREAA--MTEIDVL 145
            R  + + +GEG FGQV       LD         VA+K+++S    ++ +  ++E++++
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128

Query: 146 ELLKRYDR----SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVR 200
           +++ ++       G+ C Q          + ++ E     +L ++L+    RP  ++   
Sbjct: 129 KMIGKHKNIINLLGA-CTQ-------DGPLYVIVEYASKGNLREYLQAR--RPPGLEYSY 178

Query: 201 EIG---------RQLLECV-------AFMHDLRLIHTDLKPENILFVSPEY-LKIPDYKV 243
                       + L+ C         ++   + IH DL   N+L V+ +  +KI D+ +
Sbjct: 179 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL-VTEDNVMKIADFGL 237

Query: 244 TARSPTDVNYYK-----RLP 258
            AR    ++YYK     RLP
Sbjct: 238 -ARDIHHIDYYKKTTNGRLP 256

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 42/211 (19%), Positives = 79/211 (37%), Gaps = 65/211 (30%)

Query: 95  SRYKILRKIGEGTFGQV-----LDCLDRETGETVAIKVVR---SIKKY----REAA-MTE 141
               + + +GEG FG+V          R    TVA+K+++   S  +      E   + +
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82

Query: 142 ID---VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVD 197
           ++   V++L       G+ C Q          + ++ E     SL  FLR++  R     
Sbjct: 83  VNHPHVIKLY------GA-CSQ-------DGPLLLIVEYAKYGSLRGFLRES--RKVGPG 126

Query: 198 LVREIG-----------------RQLLECV-------AFMHDLRLIHTDLKPENILFVSP 233
            +   G                   L+           ++ +++L+H DL   NIL V+ 
Sbjct: 127 YLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL-VAE 185

Query: 234 EY-LKIPDYKVTARSPTDVNYYK-----RLP 258
              +KI D+ + +R   + + Y      R+P
Sbjct: 186 GRKMKISDFGL-SRDVYEEDSYVKRSQGRIP 215

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 44/205 (21%), Positives = 72/205 (35%), Gaps = 53/205 (25%)

Query: 95  SRYKILRKIGEGTFGQV-----LDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLEL 147
              +  + +G G FG+V                VA+K+++       REA M+E+ ++  
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104

Query: 148 LKRYDR----SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
           L  ++      G+ C            I ++FE      L ++LR    R    +   E 
Sbjct: 105 LGSHENIVNLLGA-CTL-------SGPIYLIFEYCCYGDLLNYLRSK--REKFSEDEIEY 154

Query: 203 G----------------RQLLEC---VA----FMHDLRLIHTDLKPENILFVSPEYL-KI 238
                              LL     VA    F+     +H DL   N+L V+   + KI
Sbjct: 155 ENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL-VTHGKVVKI 213

Query: 239 PDYKVTARSPTDVNYYK-----RLP 258
            D+ + AR     + Y      RLP
Sbjct: 214 CDFGL-ARDIMSDSNYVVRGNARLP 237

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 65/211 (30%)

Query: 95  SRYKILRKIGEGTFGQVL-----DCLDRETGETVAIKVVRS-------IKKYREAA-MTE 141
           +  + +R IGEG FG+V        L  E    VA+K+++            REAA M E
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106

Query: 142 ID---VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVD 197
            D   +++LL      G  C            +C++FE M    L +FLR     P  V 
Sbjct: 107 FDNPNIVKLL------GV-CAV-------GKPMCLLFEYMAYGDLNEFLRSM--SPHTVC 150

Query: 198 LVREIG-----------------RQLLECV-------AFMHDLRLIHTDLKPENILFVSP 233
            +                      + L          A++ + + +H DL   N L V  
Sbjct: 151 SLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL-VGE 209

Query: 234 EY-LKIPDYKVTARSPTDVNYYK-----RLP 258
              +KI D+ + +R+    +YYK      +P
Sbjct: 210 NMVVKIADFGL-SRNIYSADYYKADGNDAIP 239

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* Length = 258

 Score = 40.0 bits (93), Expect = 8e-04
 Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 11/157 (7%)

Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
           +I    F ++ +       E   ++ +   +K       E   LE  K     G    Q 
Sbjct: 83  RIETSEFDKMDEY--LYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA---GVSVPQP 137

Query: 162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH-DLRLIH 220
              + Y  ++ ++  +    L         R      V  I   ++E V  ++ +  L+H
Sbjct: 138 ---YTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVH 194

Query: 221 TDLKPENILFVS-PEYLKIPDYKVTARSPTDVNYYKR 256
            DL   NI+++    ++ +    VT R P   +Y +R
Sbjct: 195 ADLSEYNIMYIDKVYFIDMGQA-VTLRHPMAESYLER 230

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	432
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	100.0
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.95
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.92
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.88
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.77
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.37
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.18
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.11
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.07
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.73
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.62
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.48
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.3
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.27
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.11
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.11
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.03
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.76
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.69
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.66
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.58
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.4
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.36
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.31
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.3
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.09
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.04
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.01
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.67
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.62
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.34
3mes_A	424	Choline kinase; malaria, structural genomics, stru	95.77
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	94.8

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=7.9e-65  Score=472.36  Aligned_cols=254  Identities=25%  Similarity=0.404  Sum_probs=219.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++..    ...+.+.+|+++++.|+|     ||||+++++|++++.
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~l~~~~~~~~~  106 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-----PFFVKLYFTFQDDEK  106 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC-----TTBCCEEEEEECSSE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCC-----CCCCeEEEEEEeCCE
Confidence            57999999999999999999999999999999997532    234568899999999877     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +||||||| ||+|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||++.                 
T Consensus       107 ~yivmEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~-----------------  167 (311)
T 4aw0_A          107 LYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE-----------------  167 (311)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-----------------
T ss_pred             EEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcC-----------------
Confidence            99999999 999999998865  6999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                ++.+||+|||+|+....     ...+.+||+.|||||++.+..|+.++|||||||++|+|+||.+||.+.
T Consensus       168 ----------~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~  237 (311)
T 4aw0_A          168 ----------DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG  237 (311)
T ss_dssp             ----------TSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ----------CCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                      45677777777765322     234568999999999999999999999999999999999999999988


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+.+..|.+....+|                                                 +.+++++++||.+|
T Consensus       238 ~~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~dli~~l  268 (311)
T 4aw0_A          238 NEGLIFAKIIKLEYDFP-------------------------------------------------EKFFPKARDLVEKL  268 (311)
T ss_dssp             SHHHHHHHHHHTCCCCC-------------------------------------------------TTCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCC-------------------------------------------------cccCHHHHHHHHHH
Confidence            87777766654322222                                                 24566789999999


Q ss_pred             cccCCCCCCCHHH------HhcCCCCCCCccCC
Q 047395          405 LRYDPSSRLTAHD------ALKHPFFTRDYYRR  431 (432)
Q Consensus       405 L~~dP~~R~ta~e------lL~hp~f~~~~~~~  431 (432)
                      |+.||++|||++|      +++||||++..|++
T Consensus       269 L~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~  301 (311)
T 4aw0_A          269 LVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN  301 (311)
T ss_dssp             SCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTT
T ss_pred             ccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHH
Confidence            9999999999988      58999999977764

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.4e-64  Score=477.63  Aligned_cols=254  Identities=28%  Similarity=0.453  Sum_probs=218.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .+.|+++++||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+.+++.++|     ||||+++++|.+++.+|
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H-----pnIV~l~~~~~~~~~~~  147 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH-----ENVVEMYNSYLVGDELW  147 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCC-----TTBCCEEEEEEETTEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCC-----CCCCcEEEEEEECCEEE
Confidence            467999999999999999999999999999999997433 345668899999999987     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |||||| ||+|.+++...   .+++..++.++.||+.||+|||++|||||||||+|||++.                   
T Consensus       148 ivmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~-------------------  205 (346)
T 4fih_A          148 VVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-------------------  205 (346)
T ss_dssp             EEECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-------------------
T ss_pred             EEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECC-------------------
Confidence            999999 99999999874   4999999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              ++.+||+|||+|+....   .....+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.+..+
T Consensus       206 --------~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~  277 (346)
T 4fih_A          206 --------DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK  277 (346)
T ss_dssp             --------TCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             --------CCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence                    45677777777765432   2345789999999999999999999999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .+..+.....+..                                              .....+++++.+||.+||+.|
T Consensus       278 ~~~~i~~~~~~~~----------------------------------------------~~~~~~s~~~~dli~~~L~~d  311 (346)
T 4fih_A          278 AMKMIRDNLPPRL----------------------------------------------KNLHKVSPSLKGFLDRLLVRD  311 (346)
T ss_dssp             HHHHHHHSSCCCC----------------------------------------------SCGGGSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHcCCCCCC----------------------------------------------CccccCCHHHHHHHHHHcCCC
Confidence            6666544221110                                              012356778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCc
Q 047395          409 PSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~  428 (432)
                      |++|||++|+|+||||++..
T Consensus       312 P~~R~ta~e~l~Hp~~~~~~  331 (346)
T 4fih_A          312 PAQRATAAELLKHPFLAKAG  331 (346)
T ss_dssp             TTTSCCHHHHTTCGGGGGCC
T ss_pred             hhHCcCHHHHhcCHhhcCCC
Confidence            99999999999999998753

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.4e-64  Score=462.90  Aligned_cols=250  Identities=25%  Similarity=0.459  Sum_probs=203.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++..    .....+.+|+++++.++|     ||||++++++++++.
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~H-----pnIv~~~~~~~~~~~   87 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH-----PHIIKLYDVIKSKDE   87 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCC-----TTBCCEEEEEECSSE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCC-----CCCCeEEEEEEECCE
Confidence            57999999999999999999999999999999996432    334568899999999977     999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          171 ICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       171 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +|+|||||+|+|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||++.                  
T Consensus        88 ~~ivmEy~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~------------------  147 (275)
T 3hyh_A           88 IIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDE------------------  147 (275)
T ss_dssp             EEEEEECCCEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECT------------------
T ss_pred             EEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECC------------------
Confidence            99999999999999998865  7999999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                               ++.+||+|||+|+....  ...+.+||+.|||||++.+..+ +.++|||||||++|+|+||+.||.+.+..
T Consensus       148 ---------~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~  218 (275)
T 3hyh_A          148 ---------HLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP  218 (275)
T ss_dssp             ---------TCCEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ---------CCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH
Confidence                     45677777777765332  2345689999999999998876 57999999999999999999999987776


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+.....++|                                                 ..+++++++||.+||+.
T Consensus       219 ~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~L~~  249 (275)
T 3hyh_A          219 VLFKNISNGVYTLP-------------------------------------------------KFLSPGAAGLIKRMLIV  249 (275)
T ss_dssp             HHHHHHHHTCCCCC-------------------------------------------------TTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHHcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHccC
Confidence            66655544322221                                                 23566789999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||++|||++|+|+||||+.+
T Consensus       250 dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          250 NPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             SGGGSCCHHHHHHCHHHHTT
T ss_pred             ChhHCcCHHHHHcCcccccC
Confidence            99999999999999999764

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.5e-64  Score=476.67  Aligned_cols=253  Identities=25%  Similarity=0.408  Sum_probs=213.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|+++++||+|+||+||+|+++.+|+.||||+++..   ....+.+.+|+.+++.|+|     ||||++++++++++.+
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H-----pnIV~~~~~~~~~~~~   98 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH-----PNIVQYRESFEENGSL   98 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCC-----TTBCCEEEEEEETTEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCC-----CCCCcEEEEEEECCEE
Confidence            6899999999999999999999999999999999743   3445678899999999987     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      ||||||| ||+|.++|...+...+++..++.|+.||+.||+|||++|||||||||+|||++.                  
T Consensus        99 yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~------------------  160 (350)
T 4b9d_A           99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK------------------  160 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECT------------------
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC------------------
Confidence            9999999 999999998776567899999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                               ++.+||+|||+|+.....   ....+||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+..
T Consensus       161 ---------~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~  231 (350)
T 4b9d_A          161 ---------DGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK  231 (350)
T ss_dssp             ---------TCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             ---------CCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH
Confidence                     456777777877654432   23468999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +.+..+.....+.                                                ....+++++.+||.+||+.
T Consensus       232 ~~~~~i~~~~~~~------------------------------------------------~~~~~s~~~~~li~~~L~~  263 (350)
T 4b9d_A          232 NLVLKIISGSFPP------------------------------------------------VSLHYSYDLRSLVSQLFKR  263 (350)
T ss_dssp             HHHHHHHHTCCCC------------------------------------------------CCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHcCCCCC------------------------------------------------CCccCCHHHHHHHHHHccC
Confidence            7766654432110                                                1124567799999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||++|||++|+|+||||++.
T Consensus       264 dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          264 NPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             SGGGSCCHHHHHTSHHHHTT
T ss_pred             ChhHCcCHHHHhcCHHhhcC
Confidence            99999999999999999764

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=7.4e-63  Score=477.06  Aligned_cols=253  Identities=28%  Similarity=0.460  Sum_probs=218.0

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .+.|+++++||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+.+|+.++|     ||||+++++|.+++.+|
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H-----pnIV~l~~~~~~~~~~~  224 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH-----ENVVEMYNSYLVGDELW  224 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCC-----TTBCCEEEEEEETTEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCC-----CCCCceEEEEEECCEEE
Confidence            467999999999999999999999999999999997432 345678899999999987     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |||||| ||+|.+++...   .+++..++.++.||+.||+|||++|||||||||+||||+.                   
T Consensus       225 iVmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~-------------------  282 (423)
T 4fie_A          225 VVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-------------------  282 (423)
T ss_dssp             EEEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECT-------------------
T ss_pred             EEEeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcC-------------------
Confidence            999999 99999999865   4999999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              ++.+||+|||+|+....   .....+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+
T Consensus       283 --------~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~  354 (423)
T 4fie_A          283 --------DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK  354 (423)
T ss_dssp             --------TCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             --------CCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence                    45677777777765432   2345789999999999999999999999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .+..|.....+..                                              .....+++++++||.+||+.|
T Consensus       355 ~~~~i~~~~~~~~----------------------------------------------~~~~~~s~~~~dli~~~L~~d  388 (423)
T 4fie_A          355 AMKMIRDNLPPRL----------------------------------------------KNLHKVSPSLKGFLDRLLVRD  388 (423)
T ss_dssp             HHHHHHHSCCCCC----------------------------------------------SCTTSSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHcCCCCCC----------------------------------------------cccccCCHHHHHHHHHHcCCC
Confidence            6666544221110                                              012356778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~  427 (432)
                      |++|||++|+|+||||++.
T Consensus       389 P~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          389 PAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             TTTSCCHHHHTTCGGGGGC
T ss_pred             hhHCcCHHHHhcCHHhcCC
Confidence            9999999999999999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=5.7e-62  Score=450.93  Aligned_cols=254  Identities=23%  Similarity=0.416  Sum_probs=207.3

Q ss_pred             cCce-EEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--
Q 047395           94 TSRY-KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--  167 (432)
Q Consensus        94 ~~~y-~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--  167 (432)
                      .++| ++.++||+|+||+||+|++..+++.||+|++...   ....+.+.+|+++++.|+|     ||||+++++++.  
T Consensus        24 ~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H-----pnIV~~~~~~~~~~   98 (290)
T 3fpq_A           24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH-----PNIVRFYDSWESTV   98 (290)
T ss_dssp             TSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEEEEEE
T ss_pred             CCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCC-----CCCCcEEEEEeecc
Confidence            4455 7888999999999999999999999999999643   2345678899999999987     999999999864  


Q ss_pred             --CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cEeccCCCCcEEeecCCccccCCcc
Q 047395          168 --RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       168 --~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                        ++.+||||||| ||+|.+++.+..  .+++..++.++.||+.||+|||++|  ||||||||+|||++.          
T Consensus        99 ~~~~~~~lvmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~----------  166 (290)
T 3fpq_A           99 KGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG----------  166 (290)
T ss_dssp             TTEEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESS----------
T ss_pred             CCCcEEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEEC----------
Confidence              45789999999 999999998865  6999999999999999999999998  999999999999742          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                      .++.+||+|||+|+..... ....+||+.|||||++.+ .|+.++|||||||++|||+||+.||
T Consensus       167 ----------------~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf  229 (290)
T 3fpq_A          167 ----------------PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPY  229 (290)
T ss_dssp             ----------------TTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ----------------CCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCC
Confidence                            3456788888887654332 345689999999999876 6999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+....+...... +..|.                                             ......++++.+||
T Consensus       230 ~~~~~~~~~~~~i~~-~~~~~---------------------------------------------~~~~~~~~~~~~li  263 (290)
T 3fpq_A          230 SECQNAAQIYRRVTS-GVKPA---------------------------------------------SFDKVAIPEVKEII  263 (290)
T ss_dssp             TTCSSHHHHHHHHTT-TCCCG---------------------------------------------GGGGCCCHHHHHHH
T ss_pred             CCCCcHHHHHHHHHc-CCCCC---------------------------------------------CCCccCCHHHHHHH
Confidence            876654433221110 11110                                             01224566789999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .+||+.||++|||++|+|+||||++.
T Consensus       264 ~~~L~~dP~~R~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          264 EGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HHHccCChhHCcCHHHHhcCccccCC
Confidence            99999999999999999999999874

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.9e-63  Score=461.81  Aligned_cols=252  Identities=27%  Similarity=0.448  Sum_probs=209.6

Q ss_pred             CceEEEeeeecccceEEEEEEec---CCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDR---ETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~---~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ++|++++.||+|+||+||+|++.   .+++.||||++++..   .....+.+|++++..++|     ||||+++++++++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~l~~~~~~~   98 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH-----PFIVKLHYAFQTE   98 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCC-----TTEECEEEEEEET
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCC-----CCCCeEEEEEEEC
Confidence            57999999999999999999874   467899999996432   223457789988888876     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+||||||| ||+|.+++.+.+  .+++.+++.++.||+.||+|||++||+||||||+|||++.               
T Consensus        99 ~~~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~---------------  161 (304)
T 3ubd_A           99 GKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE---------------  161 (304)
T ss_dssp             TEEEEEECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECT---------------
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcC---------------
Confidence            9999999999 999999998875  6999999999999999999999999999999999999654               


Q ss_pred             CCCccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                  ++.+||+|||+|+...   ....+.+||+.|||||++.+..|+.++|||||||++|||+||+.||.+.
T Consensus       162 ------------~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~  229 (304)
T 3ubd_A          162 ------------EGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK  229 (304)
T ss_dssp             ------------TSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ------------CCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence                        4567777777776432   2234578999999999999999999999999999999999999999998


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+.+..|.+...++|                                                 ..+++++.+||.+|
T Consensus       230 ~~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~  260 (304)
T 3ubd_A          230 DRKETMTMILKAKLGMP-------------------------------------------------QFLSPEAQSLLRML  260 (304)
T ss_dssp             SHHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCC-------------------------------------------------CcCCHHHHHHHHHH
Confidence            88777766654322222                                                 24567789999999


Q ss_pred             cccCCCCCCC-----HHHHhcCCCCCCCcc
Q 047395          405 LRYDPSSRLT-----AHDALKHPFFTRDYY  429 (432)
Q Consensus       405 L~~dP~~R~t-----a~elL~hp~f~~~~~  429 (432)
                      |+.||++|||     ++|+++||||++..|
T Consensus       261 L~~dP~~R~ta~~~~~~eil~Hp~f~~idw  290 (304)
T 3ubd_A          261 FKRNPANRLGAGPDGVEEIKRHSFFSTIDW  290 (304)
T ss_dssp             TCSSGGGSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             cccCHHHCCCCCcCCHHHHHcCccccCCCH
Confidence            9999999998     489999999998655

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-61  Score=467.73  Aligned_cols=285  Identities=28%  Similarity=0.484  Sum_probs=225.6

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc--
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD--  166 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~--  166 (432)
                      .+.++|++++.||+|+||+||+|+++.+|+.||||+++..   ......+.+|+++|+.|+|     ||||++++++.  
T Consensus        51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H-----pnIv~l~~~~~~~  125 (398)
T 4b99_A           51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH-----DNIIAIKDILRPT  125 (398)
T ss_dssp             CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCC-----TTBCCEEEECCCS
T ss_pred             CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCC-----CCcceEeeeeecc
Confidence            3457899999999999999999999999999999999643   2334567889999999977     99999999865  


Q ss_pred             ----cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          167 ----YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       167 ----~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                          +.+.+|||||||+|+|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.+|        
T Consensus       126 ~~~~~~~~~~ivmE~~~g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~--------  195 (398)
T 4b99_A          126 VPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC--------  195 (398)
T ss_dssp             SCTTTCCCEEEEEECCSEEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC--------
T ss_pred             cccccCCEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCC--------
Confidence                346899999999889999998754  799999999999999999999999999999999999976544        


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCccccc-------CCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHH
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH-------QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~el  314 (432)
                                         .+||+|||+|+...       ......+||+.|||||++.+. .++.++|||||||++|||
T Consensus       196 -------------------~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~el  256 (398)
T 4b99_A          196 -------------------ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM  256 (398)
T ss_dssp             -------------------CEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred             -------------------CEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHH
Confidence                               45566666554321       223456899999999999886 468999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          315 CSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       315 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      ++|++||.+.+..+++..|....+.++...+.............   ..+....               .......+.++
T Consensus       257 l~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~---~~~~~~~---------------~~~~~~~~~~s  318 (398)
T 4b99_A          257 LARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQ---SLPPRQP---------------VPWETVYPGAD  318 (398)
T ss_dssp             HHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHH---SSCCCCC---------------CCHHHHSTTCC
T ss_pred             HHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhh---cCCCcCC---------------CCHHHhCCCCC
Confidence            99999999999999999999999988865443322111110000   0000000               00111234567


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +++.|||.+||++||++||||+|+|+||||++..
T Consensus       319 ~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          319 RQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence            8899999999999999999999999999998743

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.9e-61  Score=454.88  Aligned_cols=253  Identities=25%  Similarity=0.332  Sum_probs=210.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      +.|++.++||+|+||+||+|+++.+|+.||||+++...    ...+|+.++..|+|     ||||++++++.+++.+|||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~----~~~~E~~il~~l~H-----pnIV~l~~~~~~~~~~~iv  128 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV----FRVEELVACAGLSS-----PRIVPLYGAVREGPWVNIF  128 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCTHHHHTTTTCCC-----TTBCCEEEEEEETTEEEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH----hHHHHHHHHHhCCC-----CCCCcEEEEEEECCEEEEE
Confidence            56999999999999999999999999999999997532    23479999888876     9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||| ||+|.++|.+.+  .+++..++.++.||+.||+|||++|||||||||+|||++.+|                   
T Consensus       129 mEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-------------------  187 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG-------------------  187 (336)
T ss_dssp             ECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTS-------------------
T ss_pred             EeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCC-------------------
Confidence            9999 999999998865  699999999999999999999999999999999999975433                   


Q ss_pred             cccCCCCCCeEEeecCCcccccCC--------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQE--------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                             ..+||+|||+|+.....        ....+||+.|||||++.+..|+.++|||||||++|||+||.+||.+.+
T Consensus       188 -------~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~  260 (336)
T 4g3f_A          188 -------SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF  260 (336)
T ss_dssp             -------CCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC
T ss_pred             -------CEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence                   24777777777653321        233589999999999999999999999999999999999999998766


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....|....  ++                                            ....++.+++.+.+||.+||
T Consensus       261 ~~~~~~~i~~~~--~~--------------------------------------------~~~~~~~~s~~~~~li~~~L  294 (336)
T 4g3f_A          261 RGPLCLKIASEP--PP--------------------------------------------IREIPPSCAPLTAQAIQEGL  294 (336)
T ss_dssp             CSCCHHHHHHSC--CG--------------------------------------------GGGSCTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCC--CC--------------------------------------------chhcCccCCHHHHHHHHHHc
Confidence            555444443211  00                                            01123467788999999999


Q ss_pred             ccCCCCCCCHHHH-------------hcCCCCCCCccC
Q 047395          406 RYDPSSRLTAHDA-------------LKHPFFTRDYYR  430 (432)
Q Consensus       406 ~~dP~~R~ta~el-------------L~hp~f~~~~~~  430 (432)
                      +.||++|||+.|+             |+|||+.+..-+
T Consensus       295 ~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~P  332 (336)
T 4g3f_A          295 RKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEP  332 (336)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCC
T ss_pred             cCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCC
Confidence            9999999999997             689999875433

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.3e-59  Score=450.46  Aligned_cols=311  Identities=25%  Similarity=0.385  Sum_probs=222.1

Q ss_pred             eecCceEEEeeeecccceEEEEEEec---CCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDR---ETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~---~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.++|++.++||+|+||+||+|+++   .+++.||||++.... ....+.+|++++..+.+    ||||++++++|++.
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~----h~nIv~l~~~~~~~   92 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGG----QDNVMGVKYCFRKN   92 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCS----BTTBCCCSEEEEET
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcC----CCCCceEEEEEEEC
Confidence            45688999999999999999999875   467899999986533 34467789999888742    39999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecC-CccccCCcccccC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSP-EYLKIPDYKVTAR  246 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~-~~~k~~df~~~~~  246 (432)
                      +++|+||||| |++|.+++.     .+++.+++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||++..
T Consensus        93 ~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~  167 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG  167 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence            9999999999 899999984     49999999999999999999999999999999999999876 6788888887753


Q ss_pred             CCCCccccccCCCCCCeEEeecCCccc---------------ccCCccccccCCCcchhHHHhCC-CCCccchHHHHHHH
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAY---------------EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCI  310 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~---------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvi  310 (432)
                      ....           ...+.+|+.+..               ........+||+.|+|||++.+. .|+.++||||+||+
T Consensus       168 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~i  236 (361)
T 4f9c_A          168 THDT-----------KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVI  236 (361)
T ss_dssp             CTTC-----------SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHH
T ss_pred             cCCc-----------cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHH
Confidence            3221           111222221110               11122446899999999999886 48999999999999


Q ss_pred             HHHHHhCCCCCC-CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcC----c-----
Q 047395          311 LIELCSGEALFQ-THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL----P-----  380 (432)
Q Consensus       311 l~elltg~~pf~-~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----  380 (432)
                      +|||++|+.||. +.++.+++..|...+|+.+...........  ....  ...|.. ............    +     
T Consensus       237 l~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~--~~~~--~~~p~~-~~~~~~~~~~~~~~~~p~~~~~  311 (361)
T 4f9c_A          237 FLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKS--ILCS--KEVPAQ-DLRKLCERLRGMDSSTPKLTSD  311 (361)
T ss_dssp             HHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEE--EEES--SCCCCC-CHHHHHHHHC------------
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhcccc--cccc--ccCcch-hhhHHHHhhccccccccccccc
Confidence            999999999995 556778889999888865433322211000  0000  001100 000000000000    0     


Q ss_pred             -hhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          381 -RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       381 -~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                       ............++++++|||.+||++||++|+||+|+|+||||++-.
T Consensus       312 ~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          312 IQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             ----------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             cccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence             000111223456788999999999999999999999999999998753

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.7e-58  Score=431.26  Aligned_cols=267  Identities=25%  Similarity=0.349  Sum_probs=192.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeec--hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC---
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN---  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~---  169 (432)
                      ++|++++.||+|+||+||+|+++.+|+.||||+++.  .....+.+.+|+++++.|+|     ||||++++++...+   
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~H-----pnIV~~~~~~~~~~~~~   79 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH-----PGIVRYFNAWLEKNTTE   79 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEEEEEC---
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCC-----CCCCeEEEEEEecCccc
Confidence            469999999999999999999999999999999864  23445678899999999877     99999999886433   


Q ss_pred             ---------eEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcccc
Q 047395          170 ---------HICIVFEML-GPSLYDFLRKNNY-RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI  238 (432)
Q Consensus       170 ---------~~~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~  238 (432)
                               ++|+||||| ||+|.+++..... ...++..++.++.||+.||+|||++|||||||||+|||++.+|.+||
T Consensus        80 ~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl  159 (299)
T 4g31_A           80 KLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV  159 (299)
T ss_dssp             -------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             cccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEE
Confidence                     479999999 9999999987542 12456678999999999999999999999999999999876665555


Q ss_pred             CCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCC
Q 047395          239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       239 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~  318 (432)
                      +|||++.....+.....        ...    ........+..+||+.|||||++.+..|+.++|||||||++|||++  
T Consensus       160 ~DFGla~~~~~~~~~~~--------~~~----~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~--  225 (299)
T 4g31_A          160 GDFGLVTAMDQDEEEQT--------VLT----PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY--  225 (299)
T ss_dssp             CCCCCC--------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS--
T ss_pred             ccCccceecCCCccccc--------ccc----ccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc--
Confidence            55555432211100000        000    0000111234589999999999999999999999999999999996  


Q ss_pred             CCCCCCCcHHHHHHHHHHh-CCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          319 ALFQTHENLEHLAMMERVL-GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                       ||.+.  .+....+.... ...|..+                                              ...++.+
T Consensus       226 -Pf~~~--~~~~~~~~~~~~~~~p~~~----------------------------------------------~~~~~~~  256 (299)
T 4g31_A          226 -PFSTQ--MERVRTLTDVRNLKFPPLF----------------------------------------------TQKYPCE  256 (299)
T ss_dssp             -CCSSH--HHHHHHHHHHHTTCCCHHH----------------------------------------------HHHCHHH
T ss_pred             -CCCCc--cHHHHHHHHHhcCCCCCCC----------------------------------------------cccCHHH
Confidence             78642  22222222221 1222111                                              1223456


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      .+||.+||+.||++|||+.|+|+||||++..+
T Consensus       257 ~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~  288 (299)
T 4g31_A          257 YVMVQDMLSPSPMERPEAINIIENAVFEDLDF  288 (299)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSGGGCCC--
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcCHhhCCCCC
Confidence            79999999999999999999999999988654

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.8e-57  Score=460.82  Aligned_cols=263  Identities=30%  Similarity=0.477  Sum_probs=226.5

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      +.+.++|++++.||+|+||+||+|+++.+|+.||||++... ....+.+.+|+.+|+.|+|     ||||+++++|++.+
T Consensus       153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~h-----pnIv~l~~~~~~~~  227 (573)
T 3uto_A          153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH-----PTLVNLHDAFEDDN  227 (573)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCC-----TTBCCEEEEEECSS
T ss_pred             CcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCC-----CCCCeEEEEEEECC
Confidence            34567999999999999999999999999999999998643 3445678899999999987     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+||||||| ||+|.++|.... ..+++.+++.++.||+.||+|||++||+||||||+|||++.+               
T Consensus       228 ~~~iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~---------------  291 (573)
T 3uto_A          228 EMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK---------------  291 (573)
T ss_dssp             EEEEEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS---------------
T ss_pred             EEEEEEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC---------------
Confidence            999999999 999999997543 369999999999999999999999999999999999997532               


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                ..+.+||+|||+|+.....  ....+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.+.
T Consensus       292 ----------~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~  361 (573)
T 3uto_A          292 ----------RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND  361 (573)
T ss_dssp             ----------SCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred             ----------CCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH
Confidence                      3467889999988775443  2446899999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+.+..|......++..                                             ....+++++++||.+||+
T Consensus       362 ~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~dli~~~L~  396 (573)
T 3uto_A          362 DETLRNVKSCDWNMDDS---------------------------------------------AFSGISEDGKDFIRKLLL  396 (573)
T ss_dssp             HHHHHHHHTTCCCCCSG---------------------------------------------GGTTSCHHHHHHHHTTSC
T ss_pred             HHHHHHHHhCCCCCCcc---------------------------------------------cccCCCHHHHHHHHHHcc
Confidence            87777665543333211                                             123567779999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCcc
Q 047395          407 YDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      .||.+|||+.|+|+||||+..+.
T Consensus       397 ~dp~~R~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          397 ADPNTRMTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             SSGGGSCCHHHHHHSTTTSCCCC
T ss_pred             CChhHCcCHHHHhcCcCcCCCCC
Confidence            99999999999999999997654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2e-57  Score=458.16  Aligned_cols=260  Identities=25%  Similarity=0.419  Sum_probs=209.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++++.||+|+||+||+|+++.+|+.||||++++..    .......+|..++..+.+  ..|||||+++++|++.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~--~~HP~IV~l~~~f~~~~  265 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMSYAFHTPD  265 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSS--SCCTTBCCEEEEEECSS
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhh--CCCCCEeEEEEEEEECC
Confidence            367999999999999999999999999999999997532    223345566666665543  24599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+||||||| ||+|.++|.+.+  .+++..++.++.||+.||+|||++|||||||||+|||++.                
T Consensus       266 ~lylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~----------------  327 (689)
T 3v5w_A          266 KLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE----------------  327 (689)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECT----------------
T ss_pred             EEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeC----------------
Confidence            999999999 999999998875  6999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                 ++.+||+|||+|+.... ...+.+||+.|||||++.+ ..|+.++|||||||++|||++|.+||.+.+.
T Consensus       328 -----------~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~  396 (689)
T 3v5w_A          328 -----------HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT  396 (689)
T ss_dssp             -----------TSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC
T ss_pred             -----------CCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence                       45566777776655433 3345799999999999974 5799999999999999999999999976443


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+...........                    ..                          ..++.+++++++||.+||+
T Consensus       397 ~~~~~i~~~i~~~--------------------~~--------------------------~~p~~~S~~a~dLI~~lL~  430 (689)
T 3v5w_A          397 KDKHEIDRMTLTM--------------------AV--------------------------ELPDSFSPELRSLLEGLLQ  430 (689)
T ss_dssp             CCHHHHHHHHHHC--------------------CC--------------------------CCCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHhhcCC--------------------CC--------------------------CCCccCCHHHHHHHHHHcc
Confidence            2222111111100                    00                          1123567789999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCCCCCCccC
Q 047395          407 YDPSSRLT-----AHDALKHPFFTRDYYR  430 (432)
Q Consensus       407 ~dP~~R~t-----a~elL~hp~f~~~~~~  430 (432)
                      .||.+|++     |+||++||||++..|+
T Consensus       431 ~dP~~Rl~~~~~ga~ei~~HpfF~~idW~  459 (689)
T 3v5w_A          431 RDVNRRLGCLGRGAQEVKESPFFRSLDWQ  459 (689)
T ss_dssp             SCGGGCTTCSSSTHHHHTTSGGGTTCCHH
T ss_pred             CCHhHCCCCCCCCHHHHhcCccccCCCHH
Confidence            99999998     7999999999987764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=5.4e-57  Score=420.52  Aligned_cols=246  Identities=20%  Similarity=0.299  Sum_probs=203.7

Q ss_pred             cCceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .++|.+.++||+|+||+||+|++.     .+++.||||+++.. ....+.+.+|++++..++|     ||||++++++.+
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H-----pnIV~l~g~~~~   86 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH-----EHIVKFYGVCVE   86 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEECS
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCC-----CCCccEEEEEee
Confidence            468999999999999999999875     35789999999743 3445678999999999987     999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCc
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNN-----------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEY  235 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~  235 (432)
                      ++.+||||||| +|+|.++|...+           ...+++.++..++.||+.||.|||+++||||||||+|||++.   
T Consensus        87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~---  163 (299)
T 4asz_A           87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE---  163 (299)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG---
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECC---
Confidence            99999999999 999999998642           246999999999999999999999999999999999999654   


Q ss_pred             cccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHH
Q 047395          236 LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI  310 (432)
Q Consensus       236 ~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvi  310 (432)
                                              ++.+||+|||+|+.....     ....+||+.|||||++.+..|+.++|||||||+
T Consensus       164 ------------------------~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvv  219 (299)
T 4asz_A          164 ------------------------NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV  219 (299)
T ss_dssp             ------------------------GGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             ------------------------CCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHH
Confidence                                    556777777777643222     123468999999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhh
Q 047395          311 LIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH  389 (432)
Q Consensus       311 l~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (432)
                      +|||+| |+.||.+.+..+....+......                                                ..
T Consensus       220 l~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~------------------------------------------------~~  251 (299)
T 4asz_A          220 LWEIFTYGKQPWYQLSNNEVIECITQGRVL------------------------------------------------QR  251 (299)
T ss_dssp             HHHHHTTTCCTTTTSCHHHHHHHHHHTCCC------------------------------------------------CC
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcCCCC------------------------------------------------CC
Confidence            999999 99999988877766655442110                                                01


Q ss_pred             cccchHHHHHHHHHccccCCCCCCCHHHHh
Q 047395          390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDAL  419 (432)
Q Consensus       390 ~~~~~~~l~~li~~~L~~dP~~R~ta~elL  419 (432)
                      +..+++++.+||.+||+.||++|||++|++
T Consensus       252 p~~~~~~~~~li~~cl~~dP~~RPs~~~i~  281 (299)
T 4asz_A          252 PRTCPQEVYELMLGCWQREPHMRKNIKGIH  281 (299)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            234667789999999999999999999985

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.8e-56  Score=421.32  Aligned_cols=248  Identities=20%  Similarity=0.323  Sum_probs=201.3

Q ss_pred             cCceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .++|.+.++||+|+||+||+|+++     .+++.||||+++.. ....+.+.+|++++..|+|     ||||++++++.+
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H-----pnIV~l~g~~~~  114 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQH-----QHIVRFFGVCTE  114 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEECS
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCC-----CCCCcEEEEEEE
Confidence            467999999999999999999865     36789999999743 3445779999999999987     999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNN-------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSP  233 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~  233 (432)
                      .+.+||||||| +|+|.+++....             ..++++.++..|+.||+.||.|||+++||||||||+|||++.+
T Consensus       115 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~  194 (329)
T 4aoj_A          115 GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG  194 (329)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCC
Confidence            99999999999 999999998643             1358999999999999999999999999999999999997654


Q ss_pred             CccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHH
Q 047395          234 EYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVG  308 (432)
Q Consensus       234 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG  308 (432)
                                                 +.+||+|||+|+.....     ....+||+.|||||++.+..|+.++||||||
T Consensus       195 ---------------------------~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~G  247 (329)
T 4aoj_A          195 ---------------------------LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG  247 (329)
T ss_dssp             ---------------------------TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHH
T ss_pred             ---------------------------CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchH
Confidence                                       45666666666543221     2335799999999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhh
Q 047395          309 CILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM  387 (432)
Q Consensus       309 vil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (432)
                      |+||||+| |+.||.+.+..+.+..+......                                                
T Consensus       248 vvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~------------------------------------------------  279 (329)
T 4aoj_A          248 VVLWEIFTYGKQPWYQLSNTEAIDCITQGREL------------------------------------------------  279 (329)
T ss_dssp             HHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCC------------------------------------------------
T ss_pred             HHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC------------------------------------------------
Confidence            99999999 99999988877766555432110                                                


Q ss_pred             hhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       388 ~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      ..+..+++++.+||.+||+.||++|||++||+++
T Consensus       280 ~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          280 ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            0123466778999999999999999999999753

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.5e-56  Score=416.11  Aligned_cols=253  Identities=23%  Similarity=0.337  Sum_probs=199.0

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec---hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      -.+++++.++||+|+||+||+|++.   ..||||+++.   .....+.+.+|+.++..++|     ||||++++++.. +
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~H-----pNIV~l~g~~~~-~  104 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH-----VNILLFMGYMTK-D  104 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEECS-S
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEEC-C
Confidence            3568999999999999999999865   3599999863   23445678999999999987     999999998765 5


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+||||||| +|+|.++|.... .++++..+..|+.||+.||+|||+++||||||||+|||++.+               
T Consensus       105 ~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~---------------  168 (307)
T 3omv_A          105 NLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEG---------------  168 (307)
T ss_dssp             SCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETT---------------
T ss_pred             eEEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCC---------------
Confidence            689999999 999999998654 469999999999999999999999999999999999997654               


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCC---CCCccchHHHHHHHHHHHHhCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                  +.+||+|||+|+....     .....+||+.|||||++.+.   .|+.++|||||||+||||+||+.|
T Consensus       169 ------------~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~P  236 (307)
T 3omv_A          169 ------------LTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP  236 (307)
T ss_dssp             ------------EEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             ------------CcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCC
Confidence                        4566666666654321     12346899999999999753   589999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+....+..+.......|.                                           .......+++.+.+|
T Consensus       237 f~~~~~~~~~~~~~~~~~~~p~-------------------------------------------~~~~~~~~~~~l~~l  273 (307)
T 3omv_A          237 YSHINNRDQIIFMVGRGYASPD-------------------------------------------LSKLYKNCPKAMKRL  273 (307)
T ss_dssp             TTTCCCHHHHHHHHHTTCCCCC-------------------------------------------STTSCTTSCHHHHHH
T ss_pred             CCCCChHHHHHHHHhcCCCCCC-------------------------------------------cccccccchHHHHHH
Confidence            9887766554443322111110                                           001123567779999


Q ss_pred             HHHccccCCCCCCCHHHH------hcCCCCC
Q 047395          401 LQGLLRYDPSSRLTAHDA------LKHPFFT  425 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~el------L~hp~f~  425 (432)
                      |.+||+.||++|||+.|+      |+|++-+
T Consensus       274 i~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk  304 (307)
T 3omv_A          274 VADCVKKVKEERPLFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             HHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred             HHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence            999999999999999976      4677643

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.1e-56  Score=418.32  Aligned_cols=248  Identities=20%  Similarity=0.248  Sum_probs=204.7

Q ss_pred             cCceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .+++++.++||+|+||+||+|+..     .+++.||||+++..  ....+.+.+|+.++..++|     ||||++++++.
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~H-----pNIV~l~g~~~   99 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH-----PNVVCLLGVVT   99 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCC-----TTBCCEEEEEC
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCC-----CCCCCcceEEE
Confidence            467999999999999999999864     46789999999643  2345678999999999987     99999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEee
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNN--------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFV  231 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  231 (432)
                      .++.+||||||| +|+|.++|....              ...+++..+..|+.||+.||+|||+++||||||||+|||++
T Consensus       100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~  179 (308)
T 4gt4_A          100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY  179 (308)
T ss_dssp             SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence            999999999999 999999997532              13589999999999999999999999999999999999965


Q ss_pred             cCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCCCCccchHHH
Q 047395          232 SPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCDMWS  306 (432)
Q Consensus       232 ~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDiwS  306 (432)
                      +                           ++.+||+|||+|+....     .....+||+.|||||++.+..|+.++||||
T Consensus       180 ~---------------------------~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwS  232 (308)
T 4gt4_A          180 D---------------------------KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWS  232 (308)
T ss_dssp             G---------------------------GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             C---------------------------CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhh
Confidence            4                           45677777777654322     123457999999999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhh
Q 047395          307 VGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL  385 (432)
Q Consensus       307 lGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (432)
                      |||+||||+| |..||.+.+..+....+......                                              
T Consensus       233 fGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~----------------------------------------------  266 (308)
T 4gt4_A          233 YGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL----------------------------------------------  266 (308)
T ss_dssp             HHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCC----------------------------------------------
T ss_pred             HHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------------------------------------------
Confidence            9999999998 89999988877666555332110                                              


Q ss_pred             hhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       386 ~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                        +.++.+++.+.+||.+||+.||++|||+.||+++
T Consensus       267 --~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          267 --PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence              0123566778999999999999999999999875

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1e-54  Score=419.19  Aligned_cols=337  Identities=39%  Similarity=0.684  Sum_probs=265.8

Q ss_pred             CCCCceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeE
Q 047395           81 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ  160 (432)
Q Consensus        81 ~~~~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~  160 (432)
                      ....+.+..|..+.++|+++++||+|+||+||+|++..+++.||||+++...........|+.+++.+.+....|+||++
T Consensus        21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~  100 (360)
T 3llt_A           21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVK  100 (360)
T ss_dssp             GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred             cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence            33456678889999999999999999999999999999999999999987666677788899999999865555799999


Q ss_pred             eecccccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCC
Q 047395          161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       161 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      +++++...+..|+||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.+...+-. 
T Consensus       101 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~-  179 (360)
T 3llt_A          101 YHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSL-  179 (360)
T ss_dssp             EEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEE-
T ss_pred             ccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccc-
Confidence            9999999999999999999999999998765679999999999999999999999999999999999998753211100 


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                      ..... ..............+.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       180 ~~~~~-~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  258 (360)
T 3llt_A          180 ITVRR-VTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL  258 (360)
T ss_dssp             EEEEC-TTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             cchhc-ccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence            00000 00000000001246789999999998877777778899999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcch-hhhc--cCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAE-KFVR--RGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      |.+.+..+.+..+....+++|..+......... .+..  .....||................      .......++.+
T Consensus       259 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~l  332 (360)
T 3llt_A          259 FRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCL------PLYKIIKHELF  332 (360)
T ss_dssp             CCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCC------CHHHHCCCHHH
T ss_pred             CCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcc------cccccchHHHH
Confidence            999999999999999999999887766543322 1211  12335665555544443322211      11122345678


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCC
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f~  425 (432)
                      .+||.+||+.||++|||+.|+|+||||+
T Consensus       333 ~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          333 CDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            9999999999999999999999999996

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.9e-54  Score=426.28  Aligned_cols=321  Identities=36%  Similarity=0.656  Sum_probs=256.2

Q ss_pred             CCceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCC-CCCceeEe
Q 047395           83 GHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR-SGSRCVQI  161 (432)
Q Consensus        83 ~~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~-~~~~iv~~  161 (432)
                      +.+....++.+..+|++++.||+|+||+||+|++..+++.||||+++........+.+|+.+++.+++... .|+||+++
T Consensus        85 ~~~~~~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~  164 (429)
T 3kvw_A           85 GSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHM  164 (429)
T ss_dssp             SCBCCCTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCE
T ss_pred             CCccccCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEE
Confidence            34455567788999999999999999999999999999999999998777667788899999999987543 56899999


Q ss_pred             ecccccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCc
Q 047395          162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       162 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                      ++++...+.+|+||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++       
T Consensus       165 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~-------  237 (429)
T 3kvw_A          165 LENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG-------  237 (429)
T ss_dssp             EEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTT-------
T ss_pred             EeecccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCC-------
Confidence            9999999999999999988999999987666799999999999999999999999999999999999975432       


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                        ...+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|.+||
T Consensus       238 ------------------~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf  299 (429)
T 3kvw_A          238 ------------------RSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL  299 (429)
T ss_dssp             ------------------SCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ------------------CcceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCC
Confidence                              12389999999887776667778999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHH----------HHHhhcCchhhhhhhhhcc
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRES----------IKAVLKLPRLQNLVMQHVD  391 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~  391 (432)
                      .+.+..+.+..+...++.++..+..........+...+...+.........          .......+....+......
T Consensus       300 ~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  379 (429)
T 3kvw_A          300 PGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG  379 (429)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTT
T ss_pred             CCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccc
Confidence            999999999999999999999888766544333222221111100000000          0000000111112222234


Q ss_pred             cchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ..++.+.+||.+||++||++|||++|+|+||||++..
T Consensus       380 ~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~  416 (429)
T 3kvw_A          380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL  416 (429)
T ss_dssp             CCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred             cchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCC
Confidence            5577899999999999999999999999999998753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=5.6e-55  Score=415.69  Aligned_cols=251  Identities=21%  Similarity=0.304  Sum_probs=201.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCC-----CcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRET-----GETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW  164 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~-----~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~  164 (432)
                      .-.++|++.++||+|+||+||+|.+..+     ++.||||+++..  ......+.+|+.++..+.|    |||||+++++
T Consensus        61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~h----hpnIV~l~g~  136 (353)
T 4ase_A           61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH----HLNVVNLLGA  136 (353)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC----CTTBCCEEEE
T ss_pred             ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCC----CCcEEEEEEE
Confidence            3467899999999999999999997654     368999999743  2345678899999999976    4899999998


Q ss_pred             ccc-CCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcE
Q 047395          165 FDY-RNHICIVFEML-GPSLYDFLRKNN--------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI  228 (432)
Q Consensus       165 ~~~-~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  228 (432)
                      +.. ++.+||||||| +|+|.++|+...              ...+++..+..++.||+.||+|||+++||||||||+||
T Consensus       137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NI  216 (353)
T 4ase_A          137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI  216 (353)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccce
Confidence            865 56799999999 999999998642              23589999999999999999999999999999999999


Q ss_pred             EeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccch
Q 047395          229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCD  303 (432)
Q Consensus       229 li~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sD  303 (432)
                      |++.++                           .+||+|||+|+.....     ....+||+.|||||++.+..|+.++|
T Consensus       217 Ll~~~~---------------------------~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksD  269 (353)
T 4ase_A          217 LLSEKN---------------------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  269 (353)
T ss_dssp             EECGGG---------------------------CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             eeCCCC---------------------------CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCccc
Confidence            976544                           5566666665543221     12357899999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCcHHHH-HHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCch
Q 047395          304 MWSVGCILIELCS-GEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR  381 (432)
Q Consensus       304 iwSlGvil~ellt-g~~pf~~~~~~~~~-~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (432)
                      ||||||++|||+| |..||.+.+..+.+ ..+..... +                                         
T Consensus       270 VwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~-~-----------------------------------------  307 (353)
T 4ase_A          270 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-M-----------------------------------------  307 (353)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCC-C-----------------------------------------
T ss_pred             EeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCC-C-----------------------------------------
Confidence            9999999999998 99999886644333 22222110 0                                         


Q ss_pred             hhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       382 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                            ..++.+++++.+||.+||+.||++|||+.||++|
T Consensus       308 ------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          308 ------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence                  1123456779999999999999999999999987

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=2.7e-53  Score=414.40  Aligned_cols=343  Identities=30%  Similarity=0.538  Sum_probs=256.8

Q ss_pred             CCCCCCCCceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCC--
Q 047395           77 RNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS--  154 (432)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~--  154 (432)
                      ....+++++++..|+.+.++|++.++||+|+||+||+|++..+++.||||+++......+.+.+|+.+++.+.+....  
T Consensus        19 ~~~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~   98 (397)
T 1wak_A           19 NDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP   98 (397)
T ss_dssp             ---CC--CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCG
T ss_pred             ccCCCCCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCC
Confidence            334556788899999999999999999999999999999999999999999987766777889999999999874322  


Q ss_pred             -CCceeEeecccc----cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCCcE
Q 047395          155 -GSRCVQIRNWFD----YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL-RLIHTDLKPENI  228 (432)
Q Consensus       155 -~~~iv~~~~~~~----~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NI  228 (432)
                       |+||+++++++.    ....+|+||||++++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+||
T Consensus        99 ~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NI  178 (397)
T 1wak_A           99 NREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENI  178 (397)
T ss_dssp             GGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGE
T ss_pred             CcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHe
Confidence             578999999887    56789999999999999988876556799999999999999999999998 999999999999


Q ss_pred             EeecCCccccCCcccccC------CC---CC-------------ccccccCCCCCCeEEeecCCcccccCCccccccCCC
Q 047395          229 LFVSPEYLKIPDYKVTAR------SP---TD-------------VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRH  286 (432)
Q Consensus       229 li~~~~~~k~~df~~~~~------~~---~~-------------~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~  286 (432)
                      |++.++.....+++....      ..   ..             ............+||+|||++..........+||+.
T Consensus       179 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~  258 (397)
T 1wak_A          179 LLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQ  258 (397)
T ss_dssp             EECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGG
T ss_pred             eEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCc
Confidence            998765321111000000      00   00             000000112347999999999887776677789999


Q ss_pred             cchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCC
Q 047395          287 YRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGR  360 (432)
Q Consensus       287 y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~  360 (432)
                      |+|||++.+..++.++|||||||++|+|++|..||.+.+      ..+.+..+....+.+|..+..........+...+.
T Consensus       259 y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  338 (397)
T 1wak_A          259 YRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGD  338 (397)
T ss_dssp             GCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSS
T ss_pred             ccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccc
Confidence            999999999999999999999999999999999998655      45678888899999998877655443333322222


Q ss_pred             cCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ................       ..........+..+.+||.+||+.||++|||+.|+|+||||++
T Consensus       339 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          339 LKHITKLKPWGLFEVL-------VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             BSSCCCCCCCCHHHHH-------HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             cccccccCCcchhHhh-------hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            1111111100000000       0001122345677999999999999999999999999999974

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=3.9e-53  Score=411.32  Aligned_cols=321  Identities=36%  Similarity=0.639  Sum_probs=250.6

Q ss_pred             CCceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcC-CCCCceeEe
Q 047395           83 GHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD-RSGSRCVQI  161 (432)
Q Consensus        83 ~~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~-~~~~~iv~~  161 (432)
                      ..+.+..++.+.++|++.+.||+|+||+||+|++..+++.||||+++........+..|+.+++.+.+.. ..+++|+.+
T Consensus        42 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  121 (382)
T 2vx3_A           42 YDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHL  121 (382)
T ss_dssp             SCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCE
T ss_pred             CcEEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEe
Confidence            3467788999999999999999999999999999999999999999876666677888999999997632 234469999


Q ss_pred             ecccccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--hCCcEeccCCCCcEEeecCCccccC
Q 047395          162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH--DLRLIHTDLKPENILFVSPEYLKIP  239 (432)
Q Consensus       162 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH--~~~ivHrDlkp~NIli~~~~~~k~~  239 (432)
                      ++++...+.+|+||||++++|.+++.......+++..++.++.||+.||.|||  +.||+||||||+|||+..       
T Consensus       122 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-------  194 (382)
T 2vx3_A          122 KRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-------  194 (382)
T ss_dssp             EEEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-------
T ss_pred             eeeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-------
Confidence            99999999999999999889999999876567999999999999999999999  579999999999999743       


Q ss_pred             CcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       240 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                        +..+.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|..
T Consensus       195 ------------------~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  256 (382)
T 2vx3_A          195 ------------------PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEP  256 (382)
T ss_dssp             ------------------TTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ------------------CCCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                              23567899999998877766667789999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCC----------CCCCHHHHHHhhcCchh-hhh---
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE----------GATSRESIKAVLKLPRL-QNL---  385 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~---  385 (432)
                      ||.+.+..+.+..+....+.+|..+..........+.......|..          .......+...+..... ...   
T Consensus       257 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  336 (382)
T 2vx3_A          257 LFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRA  336 (382)
T ss_dssp             SSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTT
T ss_pred             CCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCcccc
Confidence            9999999999999999999999887765443222111111111100          00000111111100000 000   


Q ss_pred             -hhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          386 -VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       386 -~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                       ........++.+.+||.+||++||++|||++|+|+||||++..
T Consensus       337 ~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          337 GESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             TCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred             ccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence             0000011235789999999999999999999999999998754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=1.3e-52  Score=403.14  Aligned_cols=337  Identities=45%  Similarity=0.872  Sum_probs=268.0

Q ss_pred             CCCCCCceeecCceecCceEEEeeeecccceEEEEEEecCCC-cEEEEEEeechhhhhHhHHHHHHHHHHHHhcCC-CCC
Q 047395           79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETG-ETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR-SGS  156 (432)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~-~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~-~~~  156 (432)
                      ++..+.+....|+.+.++|++.+.||+|+||+||+|++..++ +.||||+++......+.+.+|+.+++.+.|... .+.
T Consensus         3 ~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~   82 (355)
T 2eu9_A            3 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKF   82 (355)
T ss_dssp             BCTTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCS
T ss_pred             cccCCCcccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCce
Confidence            456778889999999999999999999999999999998777 689999998766677788899999999998543 234


Q ss_pred             ceeEeecccccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcc
Q 047395          157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYL  236 (432)
Q Consensus       157 ~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  236 (432)
                      +++.+++++...+..|+||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||+...+..
T Consensus        83 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~  162 (355)
T 2eu9_A           83 LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE  162 (355)
T ss_dssp             CBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEE
T ss_pred             eEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccc
Confidence            58899999999999999999999999999987765679999999999999999999999999999999999999665433


Q ss_pred             ccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh
Q 047395          237 KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       237 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt  316 (432)
                      .+.+....        .....+..+.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++
T Consensus       163 ~~~~~~~~--------~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  234 (355)
T 2eu9_A          163 TLYNEHKS--------CEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR  234 (355)
T ss_dssp             EEECCC-C--------CCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             cccccccc--------ccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh
Confidence            32221110        0011235678999999999887776677789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       317 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      |..||.+.+..+.+..+....+++|..+.......  .+...+...|+................  . .........+..
T Consensus       235 g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~  309 (355)
T 2eu9_A          235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQ--KYFYKGGLVWDENSSDGRYVKENCKPL--K-SYMLQDSLEHVQ  309 (355)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCG--GGEETTEECCCTTSHHHHHHHHHCCCG--G-GGCSCCSHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccch--hhhcccccccccccchhccccccCCcc--c-ccccccchhHHH
Confidence            99999999999999999999999999888776443  223334444544332222222111100  0 001112334667


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +.+||.+||+.||++|||+.|+|+||||++..
T Consensus       310 l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          310 LFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence            99999999999999999999999999998743

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.3e-52  Score=400.47  Aligned_cols=330  Identities=48%  Similarity=0.896  Sum_probs=262.1

Q ss_pred             CceeecCceecCceEEEeeeecccceEEEEEEe-cCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcC-CCCCceeEe
Q 047395           84 HYLFALGENLTSRYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD-RSGSRCVQI  161 (432)
Q Consensus        84 ~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~-~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~-~~~~~iv~~  161 (432)
                      ...+..|+.+.++|++.+.||+|+||+||+|.+ ..+++.||||+++......+.+.+|+.+++.+.|.. ..+++++++
T Consensus         3 ~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~   82 (339)
T 1z57_A            3 HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQM   82 (339)
T ss_dssp             GGTCSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCE
T ss_pred             ceeeecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEee
Confidence            345677889999999999999999999999998 567899999999876666778899999999999853 344579999


Q ss_pred             ecccccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCc
Q 047395          162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       162 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                      ++++...+.+|+||||++++|.+++......++++..++.++.||+.||+|||++||+||||||+|||++..+.....+.
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~  162 (339)
T 1z57_A           83 LEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNP  162 (339)
T ss_dssp             EEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC-
T ss_pred             ecccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCC
Confidence            99999999999999999999999999876567999999999999999999999999999999999999876543222111


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                      +...        ......++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus       163 ~~~~--------~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf  234 (339)
T 1z57_A          163 KIKR--------DERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF  234 (339)
T ss_dssp             ---C--------EEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             cccc--------ccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence            1000        00011256799999999988777667778999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ...+..+....+....+++|..+.......  .+.......|+...............  +. ......+..++.+.+||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~l~~li  309 (339)
T 1z57_A          235 PTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHDRLDWDEHSSAGRYVSRACKP--LK-EFMLSQDVEHERLFDLI  309 (339)
T ss_dssp             CCSCHHHHHHHHHHHHCSCCHHHHHHCSCG--GGEETTEECCCTTSHHHHHHHHHCCC--GG-GGCSCCSHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHhCCCCHHHHhhccch--hHHhhccccccccccccchhhhcCcc--hh-hhcccchhhHHHHHHHH
Confidence            999999999999999999999888766532  23333444555433222222111110  00 01112234567899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      .+||+.||.+|||+.|+|+||||+.
T Consensus       310 ~~~L~~dP~~Rpt~~ell~hp~f~~  334 (339)
T 1z57_A          310 QKMLEYDPAKRITLREALKHPFFDL  334 (339)
T ss_dssp             HHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred             HHHhCcCcccccCHHHHhcCHHHHH
Confidence            9999999999999999999999975

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.3e-52  Score=395.86  Aligned_cols=289  Identities=30%  Similarity=0.496  Sum_probs=223.6

Q ss_pred             cCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh------hhhHhHHHHHHHHHHHHhcCCCCCceeEee
Q 047395           89 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK------KYREAAMTEIDVLELLKRYDRSGSRCVQIR  162 (432)
Q Consensus        89 ~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~  162 (432)
                      +|+.+.++|++.+.||+|+||+||+|++..+++.||||+++...      .......+|+.+++.+...  .|+||++++
T Consensus         3 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~h~niv~~~   80 (308)
T 3g33_A            3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAF--EHPNVVRLM   80 (308)
T ss_dssp             -------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHH--CCTTBCCEE
T ss_pred             CCcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhc--CCCCeEEee
Confidence            45677889999999999999999999999999999999986322      1234677888888888732  239999999


Q ss_pred             cccccCC-----eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccc
Q 047395          163 NWFDYRN-----HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLK  237 (432)
Q Consensus       163 ~~~~~~~-----~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  237 (432)
                      +++....     .+++||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.     
T Consensus        81 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~-----  155 (308)
T 3g33_A           81 DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS-----  155 (308)
T ss_dssp             EEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECT-----
T ss_pred             eeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC-----
Confidence            9987654     689999999889999999876556999999999999999999999999999999999999654     


Q ss_pred             cCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHH
Q 047395          238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       238 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ell  315 (432)
                                            ++.+||+|||++.....  .....+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       156 ----------------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~  213 (308)
T 3g33_A          156 ----------------------GGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF  213 (308)
T ss_dssp             ----------------------TSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTT
T ss_pred             ----------------------CCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHH
Confidence                                  45677777777764332  234467899999999999999999999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchH
Q 047395          316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG  395 (432)
Q Consensus       316 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (432)
                      +|..||.+.+..+....+....+.++...+........       ..++...               ........+.+++
T Consensus       214 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~---------------~~~~~~~~~~~~~  271 (308)
T 3g33_A          214 RRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR-------GAFPPRG---------------PRPVQSVVPEMEE  271 (308)
T ss_dssp             TSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCG-------GGSCCCC---------------CCCHHHHSCSCCH
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccc-------cccCCCC---------------CCcHHHhCccccH
Confidence            99999999999999999988888776543222111100       0000000               0011223356788


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          396 YLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       396 ~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .+.+||.+||+.||++|||+.|+|+||||++..
T Consensus       272 ~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          272 SGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             HHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence            899999999999999999999999999998754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=1.6e-52  Score=398.00  Aligned_cols=253  Identities=25%  Similarity=0.401  Sum_probs=215.1

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ..++|++.+.||+|+||.||+|++..+|+.||||++....   .....+.+|+.+++.++|     +||+++++++...+
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pnIv~l~~~~~~~~   87 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH-----PNIVKLFEVIETEK   87 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCC-----TTBCCEEEEEECSS
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEEECC
Confidence            4578999999999999999999999999999999997532   334567889999998876     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ +++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++.                
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~----------------  149 (328)
T 3fe3_A           88 TLYLIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA----------------  149 (328)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT----------------
T ss_pred             EEEEEEECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcC----------------
Confidence            999999999 999999998765  6999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCC-ccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWS-YPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                 ++.+||+|||++.....  .....+||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.+
T Consensus       150 -----------~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  218 (328)
T 3fe3_A          150 -----------DMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN  218 (328)
T ss_dssp             -----------TSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -----------CCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC
Confidence                       45677777777754332  23446899999999999988875 78999999999999999999999887


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....+.......|                                                 ...++.+.+||.+||
T Consensus       219 ~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~L  249 (328)
T 3fe3_A          219 LKELRERVLRGKYRIP-------------------------------------------------FYMSTDCENLLKRFL  249 (328)
T ss_dssp             HHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCC-------------------------------------------------CCCCHHHHHHHHHHC
Confidence            7666555544322222                                                 134566889999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCc
Q 047395          406 RYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +.||.+|||++|+++||||+...
T Consensus       250 ~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          250 VLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             CSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             CCChhHCcCHHHHhcCHhhcCCC
Confidence            99999999999999999998644

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.6e-52  Score=416.04  Aligned_cols=302  Identities=26%  Similarity=0.461  Sum_probs=231.7

Q ss_pred             CCCceeecCc---eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCC
Q 047395           82 DGHYLFALGE---NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSG  155 (432)
Q Consensus        82 ~~~~~~~~~~---~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~  155 (432)
                      ...+.+..++   .+.++|++++.||+|+||+||+|++..+++.||||++...   ......+.+|+.+++.++|     
T Consensus        46 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----  120 (464)
T 3ttj_A           46 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-----  120 (464)
T ss_dssp             CCEEEEEC--CEEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCC-----
T ss_pred             ccceeeecCCcceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCC-----
Confidence            4456666666   5678999999999999999999999999999999999753   3345667889999998876     


Q ss_pred             CceeEeecccccC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEE
Q 047395          156 SRCVQIRNWFDYR------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL  229 (432)
Q Consensus       156 ~~iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  229 (432)
                      +||+++++++...      ..+|+||||++++|.+.+..    .+++..++.++.||+.||+|||++||+||||||+|||
T Consensus       121 pnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIl  196 (464)
T 3ttj_A          121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV  196 (464)
T ss_dssp             TTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred             CCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEE
Confidence            9999999998543      56899999998888888753    4899999999999999999999999999999999999


Q ss_pred             eecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHH
Q 047395          230 FVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSV  307 (432)
Q Consensus       230 i~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSl  307 (432)
                      ++.                           ++.+||+|||+++.....  ....+||+.|+|||++.+..++.++|||||
T Consensus       197 l~~---------------------------~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  249 (464)
T 3ttj_A          197 VKS---------------------------DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV  249 (464)
T ss_dssp             ECT---------------------------TSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHH
T ss_pred             EeC---------------------------CCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHH
Confidence            654                           456777777777654432  344689999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhh
Q 047395          308 GCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM  387 (432)
Q Consensus       308 Gvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (432)
                      ||++|||++|+.||.+.+..+++..|.+.+|.++...+.........+...... +..  ..   +....... ......
T Consensus       250 G~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~-~~~--~~---~~~~~~~~-~~~~~~  322 (464)
T 3ttj_A          250 GCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK-YAG--LT---FPKLFPDS-LFPADS  322 (464)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCC-CCC--CC---HHHHSCGG-GSCCSS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccc-cCC--CC---hHHhCccc-cccccc
Confidence            999999999999999999999999999999999888877765544444332111 000  00   00000000 000000


Q ss_pred             hhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       388 ~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ......++.+++||.+||++||++|||++|+|+||||+.
T Consensus       323 ~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          323 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             HHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             ccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence            111223677999999999999999999999999999985

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.2e-52  Score=403.60  Aligned_cols=263  Identities=27%  Similarity=0.475  Sum_probs=223.3

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh-------hhHhHHHHHHHHHHHHhcCCCCCceeEee
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLKRYDRSGSRCVQIR  162 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~iv~~~  162 (432)
                      ...+.++|++.+.||+|+||+||+|++..+|+.||+|+++....       ..+.+.+|+.++..+.|     |||++++
T Consensus         7 ~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~h-----pnIv~l~   81 (361)
T 2yab_A            7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH-----PNIITLH   81 (361)
T ss_dssp             CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCC-----TTBCCEE
T ss_pred             CCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCC-----cCCCcEE
Confidence            34567899999999999999999999999999999999975322       24568899999988876     9999999


Q ss_pred             cccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCc
Q 047395          163 NWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       163 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                      +++...+.+|+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+..++       
T Consensus        82 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~-------  152 (361)
T 2yab_A           82 DVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN-------  152 (361)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT-------
T ss_pred             EEEEeCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCC-------
Confidence            9999999999999999 999999997654  699999999999999999999999999999999999975432       


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                      .....+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       153 ----------------~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~  216 (361)
T 2yab_A          153 ----------------IPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS  216 (361)
T ss_dssp             ----------------SSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCC
T ss_pred             ----------------CCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCC
Confidence                            11236889999988764432  344679999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.+..+.+..+......++...                                             ...+++.+.+
T Consensus       217 Pf~~~~~~~~~~~i~~~~~~~~~~~---------------------------------------------~~~~s~~~~~  251 (361)
T 2yab_A          217 PFLGDTKQETLANITAVSYDFDEEF---------------------------------------------FSQTSELAKD  251 (361)
T ss_dssp             SSCCSSHHHHHHHHHTTCCCCCHHH---------------------------------------------HTTSCHHHHH
T ss_pred             CCCCCCHHHHHHHHHhcCCCCCchh---------------------------------------------ccCCCHHHHH
Confidence            9998887777666655433333221                                             2345677899


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||.+||..||++|||+.|+|+||||+..
T Consensus       252 li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          252 FIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             HHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            9999999999999999999999999864

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.4e-52  Score=395.94  Aligned_cols=286  Identities=30%  Similarity=0.459  Sum_probs=225.5

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ++.+.++|+++++||+|+||+||+|++. +++.||+|+++...   .....+.+|+.+++.++|     +||+++++++.
T Consensus        16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~   89 (311)
T 3niz_A           16 FQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH-----PNIVSLIDVIH   89 (311)
T ss_dssp             EECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCC-----TTBCCEEEEEC
T ss_pred             ecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCC-----CCEeeeeeEEc
Confidence            4667899999999999999999999985 58999999986432   234567889999999876     99999999999


Q ss_pred             cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          167 YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       167 ~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ..+.+|+||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.              
T Consensus        90 ~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~--------------  154 (311)
T 3niz_A           90 SERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS--------------  154 (311)
T ss_dssp             CSSCEEEEEECCSEEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--------------
T ss_pred             cCCEEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECC--------------
Confidence            999999999999889999998764 46999999999999999999999999999999999999654              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                   ++.+||+|||++.....   .....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.
T Consensus       155 -------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  221 (311)
T 3niz_A          155 -------------DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP  221 (311)
T ss_dssp             -------------TCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             -------------CCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCC
Confidence                         45677777777765432   2234578999999999987 458999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +....+.+..+....+.++...+.......... ........                  ........+.+++++.+||.
T Consensus       222 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------------~~~~~~~~~~~~~~~~~li~  282 (311)
T 3niz_A          222 GVTDDDQLPKIFSILGTPNPREWPQVQELPLWK-QRTFQVFE------------------KKPWSSIIPGFCQEGIDLLS  282 (311)
T ss_dssp             CSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHH-SCCCCCCC------------------CCCHHHHSTTCCHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHCCCChHHhhhhhccchhh-hccccccc------------------CCcHHHhCcccCHHHHHHHH
Confidence            998888888888888766544333322211100 00000000                  00011223456778999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +||++||++|||++|+|+||||++..
T Consensus       283 ~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          283 NMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             HHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             HHcCCChhHCCCHHHHhcCcccccCC
Confidence            99999999999999999999998753

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=9e-53  Score=403.49  Aligned_cols=254  Identities=25%  Similarity=0.424  Sum_probs=211.0

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++++.||+|+||+||+|++..+++.||||++++..    ...+...+|..++..+.    .|+||+++++++...+
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~----~hp~Iv~l~~~~~~~~   97 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR----NHPFLTQLFCCFQTPD   97 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTT----TCTTBCCEEEEEECSS
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhcc----CCCceeeEEEEEEeCC
Confidence            468999999999999999999999999999999997532    23455677888888764    2499999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.                
T Consensus        98 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~----------------  159 (353)
T 3txo_A           98 RLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDH----------------  159 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT----------------
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECC----------------
Confidence            999999999 899999998765  6999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                 ++.+||+|||+++...   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+
T Consensus       160 -----------~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~  228 (353)
T 3txo_A          160 -----------EGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN  228 (353)
T ss_dssp             -----------TSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -----------CCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC
Confidence                       4556777777665422   22344689999999999999889999999999999999999999999888


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....+.......|                                                 ..++..+.+||.+||
T Consensus       229 ~~~~~~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li~~lL  259 (353)
T 3txo_A          229 EDDLFEAILNDEVVYP-------------------------------------------------TWLHEDATGILKSFM  259 (353)
T ss_dssp             HHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHh
Confidence            7777666654322222                                                 134566889999999


Q ss_pred             ccCCCCCCCH------HHHhcCCCCCCCcc
Q 047395          406 RYDPSSRLTA------HDALKHPFFTRDYY  429 (432)
Q Consensus       406 ~~dP~~R~ta------~elL~hp~f~~~~~  429 (432)
                      +.||++||++      +|+++||||++..+
T Consensus       260 ~~dP~~R~~~~~~~~~~~il~hp~f~~~~w  289 (353)
T 3txo_A          260 TKNPTMRLGSLTQGGEHAILRHPFFKEIDW  289 (353)
T ss_dssp             CSSGGGSTTSGGGTCTHHHHTSGGGTTCCH
T ss_pred             hhCHHHccCCcccCCHHHHhhCCcccCCCH
Confidence            9999999998      89999999998654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=3.2e-52  Score=394.28  Aligned_cols=253  Identities=27%  Similarity=0.452  Sum_probs=217.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++++.||+|+||+||+|++..+|+.||+|++++..    ...+.+.+|+.++..+.|     |||+++++++.+.+
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~Iv~~~~~~~~~~   79 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH-----PFIIRMWGTFQDAQ   79 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB-----TTBCCEEEEEECSS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCC-----CCCceEeEEEEeCC
Confidence            367999999999999999999999999999999997542    234566778888887766     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++                 
T Consensus        80 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-----------------  140 (318)
T 1fot_A           80 QIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD-----------------  140 (318)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC-----------------
T ss_pred             EEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEc-----------------
Confidence            999999999 899999998764  699999999999999999999999999999999999964                 


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                .++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+
T Consensus       141 ----------~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  210 (318)
T 1fot_A          141 ----------KNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK  210 (318)
T ss_dssp             ----------TTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             ----------CCCCEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH
Confidence                      4556788888877766655566789999999999999999999999999999999999999998877766


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.......|                                                 ..+++++.+||.+||+.|
T Consensus       211 ~~~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li~~lL~~d  241 (318)
T 1fot_A          211 TYEKILNAELRFP-------------------------------------------------PFFNEDVKDLLSRLITRD  241 (318)
T ss_dssp             HHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHTCSC
T ss_pred             HHHHHHhCCCCCC-------------------------------------------------CCCCHHHHHHHHHHhccC
Confidence            6555543221111                                                 234566899999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCCcc
Q 047395          409 PSSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       409 P~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      |++||     +++|+++||||++..+
T Consensus       242 p~~R~~~~~~~~~~i~~hp~f~~~~~  267 (318)
T 1fot_A          242 LSQRLGNLQNGTEDVKNHPWFKEVVW  267 (318)
T ss_dssp             TTTCTTSSTTTTHHHHTSGGGSSCCH
T ss_pred             HHHcCCCcCCCHHHHhcCccccCCCH
Confidence            99999     9999999999987654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-52  Score=397.97  Aligned_cols=260  Identities=24%  Similarity=0.427  Sum_probs=223.7

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+.++|++.+.||+|+||+||+|.+..+++.||+|+++........+.+|+.++..++|     |||+++++++...+.+
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h-----pnIv~~~~~~~~~~~~   76 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH-----RNILHLHESFESMEEL   76 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCC-----TTBCCEEEEEEETTEE
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCC-----CCCCeEeEEEecCCEE
Confidence            45789999999999999999999999999999999998666666778899999998876     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ |++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+                 
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-----------------  138 (321)
T 1tki_A           77 VMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-----------------  138 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-----------------
T ss_pred             EEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-----------------
Confidence            9999999 889999997653 369999999999999999999999999999999999997531                 


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              .++.+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       139 --------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~  210 (321)
T 1tki_A          139 --------RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ  210 (321)
T ss_dssp             --------SCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             --------CCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH
Confidence                    2467888888888765432  234578999999999999889999999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+......++...                                             .+.++.++.+||.+||+.|
T Consensus       211 ~~~~i~~~~~~~~~~~---------------------------------------------~~~~s~~~~~li~~~L~~d  245 (321)
T 1tki_A          211 IIENIMNAEYTFDEEA---------------------------------------------FKEISIEAMDFVDRLLVKE  245 (321)
T ss_dssp             HHHHHHHTCCCCCHHH---------------------------------------------HTTSCHHHHHHHHTTSCSS
T ss_pred             HHHHHHcCCCCCChhh---------------------------------------------hccCCHHHHHHHHHHcCCC
Confidence            7666655443333221                                             2345677899999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~  427 (432)
                      |.+|||+.|+|+||||++.
T Consensus       246 p~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          246 RKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             GGGSCCHHHHHHSHHHHSC
T ss_pred             hhHCcCHHHHhcChhhccC
Confidence            9999999999999999764

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.2e-53  Score=396.61  Aligned_cols=193  Identities=23%  Similarity=0.290  Sum_probs=154.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC----
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN----  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~----  169 (432)
                      ..+|.+.++||+|+||+||+|++  +|+.||||+++...........|+..+..++|     ||||++++++...+    
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~H-----pNIv~l~g~~~~~~~~~~   74 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRH-----ENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCC-----TTBCCEEEEEEEECSSSE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCCC-----CCCCcEEEEEEecCCCce
Confidence            45799999999999999999987  48999999997654333333344444445555     99999999987543    


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcEeccCCCCcEEeecCCccccCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL--------RLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      .+||||||| +|+|.++|+..   +++++.+..++.|++.||+|||++        +||||||||+|||++.        
T Consensus        75 ~~~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~--------  143 (303)
T 3hmm_A           75 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK--------  143 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECT--------
T ss_pred             EEEEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECC--------
Confidence            689999999 99999999875   499999999999999999999987        9999999999999654        


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCC-------ccccccCCCcchhHHHhCC------CCCccchHHHH
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-------HNYIVSTRHYRAPEVILGL------GWSYPCDMWSV  307 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~sDiwSl  307 (432)
                                         ++.+||+|||+|+.....       ....+||+.|||||++.+.      .++.++|||||
T Consensus       144 -------------------~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~  204 (303)
T 3hmm_A          144 -------------------NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM  204 (303)
T ss_dssp             -------------------TSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHH
T ss_pred             -------------------CCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhH
Confidence                               456677777766543322       1235799999999999765      36779999999


Q ss_pred             HHHHHHHHhCCCCCCC
Q 047395          308 GCILIELCSGEALFQT  323 (432)
Q Consensus       308 Gvil~elltg~~pf~~  323 (432)
                      ||+||||+||.+||..
T Consensus       205 Gvvl~El~tg~~~~~~  220 (303)
T 3hmm_A          205 GLVFWEIARRCSIGGI  220 (303)
T ss_dssp             HHHHHHHHHTBCBTTB
T ss_pred             HHHHHHHHHCCCCCCc
Confidence            9999999999888754

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=4.3e-52  Score=413.64  Aligned_cols=313  Identities=25%  Similarity=0.421  Sum_probs=219.0

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc--
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD--  166 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~--  166 (432)
                      .+.++|++++.||+|+||+||+|++..+++.||||++...   ......+.+|+.++..++|     +||+++++++.  
T Consensus        50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h-----~niv~l~~~~~~~  124 (458)
T 3rp9_A           50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH-----DHVVKVLDIVIPK  124 (458)
T ss_dssp             CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCC-----TTBCCEEEECCCS
T ss_pred             ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCC-----CCCCceEEEEecC
Confidence            4568999999999999999999999999999999998642   2344678899999999876     99999999984  


Q ss_pred             ---cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          167 ---YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       167 ---~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                         ....+|+||||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus       125 ~~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGl  202 (458)
T 3rp9_A          125 DVEKFDELYVVLEIADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGL  202 (458)
T ss_dssp             CTTTCCCEEEEECCCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CcccCceEEEEEeccccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeeccccc
Confidence               346799999999999999998754  699999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCcccccc---CCCCCCeEEeecCCcccccCCccccccCCCcchhHHHh-CCCCCccchHHHHHHHHHHHHh---
Q 047395          244 TARSPTDVNYYKR---LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCS---  316 (432)
Q Consensus       244 ~~~~~~~~~~~~~---~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGvil~ellt---  316 (432)
                      +............   ........+++|+............+||+.|+|||++. +..++.++|||||||++|||++   
T Consensus       203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~  282 (458)
T 3rp9_A          203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK  282 (458)
T ss_dssp             CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTST
T ss_pred             chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcc
Confidence            8754332211100   01112234455554444444455678999999999875 5569999999999999999999   


Q ss_pred             --------CCCCCCCCC--------------------cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCC
Q 047395          317 --------GEALFQTHE--------------------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGAT  368 (432)
Q Consensus       317 --------g~~pf~~~~--------------------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (432)
                              |.++|.+.+                    ..+++..|...+|.++...+..............   .+... 
T Consensus       283 ~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~---~~~~~-  358 (458)
T 3rp9_A          283 ENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRI---FPKRE-  358 (458)
T ss_dssp             TTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTT---SCCCC-
T ss_pred             ccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHh---cCCCC-
Confidence                    777886654                    3577888889999998887766544322111110   00000 


Q ss_pred             CHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          369 SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                                    ........+..++.+.+||.+||++||++|||++|+|+||||++...
T Consensus       359 --------------~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~  405 (458)
T 3rp9_A          359 --------------GTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI  405 (458)
T ss_dssp             --------------CCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred             --------------CCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence                          00011223456788999999999999999999999999999987643

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.8e-52  Score=401.14  Aligned_cols=283  Identities=28%  Similarity=0.528  Sum_probs=227.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.++|++++.||+|+||.||+|.+..+|+.||||++...   ......+.+|+.+++.++|     +||+++++++...
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pnIv~l~~~~~~~   96 (367)
T 1cm8_A           22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH-----ENVIGLLDVFTPD   96 (367)
T ss_dssp             CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCB-----TTBCCCSEEECSC
T ss_pred             eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCC-----cCCCCceeeEecC
Confidence            3468899999999999999999999999999999998532   2344567889999999877     9999999998765


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          169 ------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       169 ------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                            ..+|+||||++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++           
T Consensus        97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~-----------  162 (367)
T 1cm8_A           97 ETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN-----------  162 (367)
T ss_dssp             SSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-----------
T ss_pred             CccccCceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc-----------
Confidence                  356999999999999999874   499999999999999999999999999999999999965           


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                      .++.+||+|||+++.........+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus       163 ----------------~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf  226 (367)
T 1cm8_A          163 ----------------EDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF  226 (367)
T ss_dssp             ----------------TTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             ----------------CCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCC
Confidence                            4456788888887776666666789999999999988 67999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+..+++..+....+.++..+...+...............+                  ...........++.+.+||
T Consensus       227 ~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~ll  288 (367)
T 1cm8_A          227 KGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE------------------KKDFASILTNASPLAVNLL  288 (367)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCC------------------CCCGGGTCTTCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCC------------------CCCHHHHCCCCCHHHHHHH
Confidence            9999999999999999999988877654332111100000000                  0000112245677899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .+||+.||++|||++|+|+||||++.
T Consensus       289 ~~mL~~dP~~R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          289 EKMLVLDAEQRVTAGEALAHPYFESL  314 (367)
T ss_dssp             HHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HHHccCChhHCCCHHHHhcChHHHhh
Confidence            99999999999999999999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.6e-52  Score=404.07  Aligned_cols=321  Identities=26%  Similarity=0.432  Sum_probs=222.3

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ++.+.++|++++.||+|+||.||+|.+..+++.||||++...   ........+|+.++..+..    |+||+++++++.
T Consensus         4 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~----h~niv~l~~~~~   79 (388)
T 3oz6_A            4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG----HENIVNLLNVLR   79 (388)
T ss_dssp             CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTT----CTTBCCEEEEEE
T ss_pred             cCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccC----CCCCCeeeeEEe
Confidence            456678999999999999999999999999999999998532   3344567788888888861    399999999986


Q ss_pred             cC--CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          167 YR--NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       167 ~~--~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ..  ..+|+||||++++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        80 ~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  156 (388)
T 3oz6_A           80 ADNDRDVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS  156 (388)
T ss_dssp             CTTSSCEEEEEECCSEEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             cCCCCEEEEEecccCcCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence            44  479999999988999999875   4999999999999999999999999999999999999887777777777666


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                      .......................+   ..........+||+.|+|||++.+ ..++.++|||||||++|||++|++||.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  233 (388)
T 3oz6_A          157 RSFVNIRRVTNNIPLSINENTENF---DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG  233 (388)
T ss_dssp             EESSSCCCCCCCGGGCCC------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccccccccccccccccccc---ccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence            432211000000000000000000   000112234589999999999987 5789999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCC-----cCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGR-----LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .+..+++..+....+.++...................     ............+...       .........+++.+.
T Consensus       234 ~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~  306 (388)
T 3oz6_A          234 SSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNL-------LLKINPKADCNEEAL  306 (388)
T ss_dssp             SSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHH-------HHHHCTTCCCCHHHH
T ss_pred             CCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhh-------cccccccccCCHHHH
Confidence            9999999999999998887776654433221110000     0000000000000000       001112236688899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +||.+||+.||++|||++|+|+||||+..
T Consensus       307 dll~~~L~~dP~~R~t~~e~l~Hp~~~~~  335 (388)
T 3oz6_A          307 DLLDKLLQFNPNKRISANDALKHPFVSIF  335 (388)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred             HHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence            99999999999999999999999999763

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=4.6e-52  Score=396.06  Aligned_cols=253  Identities=24%  Similarity=0.426  Sum_probs=212.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++++.||+|+||+||+|++..+|+.||||++++..    .....+.+|+.++..++|     |||+++++++...+
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~l~~~~~~~~   78 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-----PFLTALKYAFQTHD   78 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCC-----TTBCCEEEEEECSS
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCC-----CcCcceEEEEEeCC
Confidence            368999999999999999999999999999999997532    234567788888887765     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.                
T Consensus        79 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~----------------  140 (337)
T 1o6l_A           79 RLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK----------------  140 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT----------------
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECC----------------
Confidence            999999999 899999998764  6999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                 ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+
T Consensus       141 -----------~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  209 (337)
T 1o6l_A          141 -----------DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  209 (337)
T ss_dssp             -----------TSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -----------CCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC
Confidence                       4456666666665422   22345689999999999999999999999999999999999999998877


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .......+......+                                                 +..+++.+.+||.+||
T Consensus       210 ~~~~~~~i~~~~~~~-------------------------------------------------p~~~s~~~~~li~~lL  240 (337)
T 1o6l_A          210 HERLFELILMEEIRF-------------------------------------------------PRTLSPEAKSLLAGLL  240 (337)
T ss_dssp             HHHHHHHHHHCCCCC-------------------------------------------------CTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCCC-------------------------------------------------CCCCCHHHHHHHHHHh
Confidence            665555443321111                                                 1245667899999999


Q ss_pred             ccCCCCCC-----CHHHHhcCCCCCCCcc
Q 047395          406 RYDPSSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       406 ~~dP~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      +.||++||     +++|+++||||+...+
T Consensus       241 ~~dP~~R~g~~~~~~~ei~~h~~f~~~~~  269 (337)
T 1o6l_A          241 KKDPKQRLGGGPSDAKEVMEHRFFLSINW  269 (337)
T ss_dssp             CSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             hcCHHHhcCCCCCCHHHHHcCCCcCCCCH
Confidence            99999999     9999999999987654

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=4.4e-52  Score=400.55  Aligned_cols=266  Identities=24%  Similarity=0.422  Sum_probs=222.2

Q ss_pred             ceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEe
Q 047395           85 YLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQI  161 (432)
Q Consensus        85 ~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~  161 (432)
                      +.+..+..+.++|++.+.||+|+||.||+|.+..+++.||+|+++..   ....+.+.+|+.+++.++|     |||+++
T Consensus        19 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~h-----pnIv~~   93 (362)
T 2bdw_A           19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-----PNIVRL   93 (362)
T ss_dssp             -----CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCC-----TTBCCE
T ss_pred             EeecCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC-----CCCCeE
Confidence            44455667788999999999999999999999999999999999743   2344568889999999876     999999


Q ss_pred             ecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCC
Q 047395          162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       162 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      ++++...+..|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++      
T Consensus        94 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~------  165 (362)
T 2bdw_A           94 HDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA------  165 (362)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS------
T ss_pred             EEEEEeCCEEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC------
Confidence            99999999999999999 899999997654  699999999999999999999999999999999999986522      


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCC
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~  318 (432)
                                        ....+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus       166 ------------------~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  227 (362)
T 2bdw_A          166 ------------------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY  227 (362)
T ss_dssp             ------------------TTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ------------------CCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCC
Confidence                              3456899999988765433  23468999999999999989999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||.+.+..+....+.......|..                                             ..+.+++.+.
T Consensus       228 ~Pf~~~~~~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~~~~~~  262 (362)
T 2bdw_A          228 PPFWDEDQHRLYAQIKAGAYDYPSP---------------------------------------------EWDTVTPEAK  262 (362)
T ss_dssp             CSSCCSSHHHHHHHHHHTCCCCCTT---------------------------------------------GGGGSCHHHH
T ss_pred             CCCCCCCHHHHHHHHHhCCCCCCcc---------------------------------------------cccCCCHHHH
Confidence            9999887766666554433222211                                             1234567789


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      +||.+||+.||++|||+.|+|+||||+.
T Consensus       263 ~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          263 SLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             HHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            9999999999999999999999999964

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.3e-51  Score=406.70  Aligned_cols=260  Identities=26%  Similarity=0.444  Sum_probs=221.0

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ..+.++|++.+.||+|+||+||+|.+..+|+.||+|++...   ......+.+|+.+++.++|     |||+++++++..
T Consensus         7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~h-----pnIv~l~~~~~~   81 (444)
T 3soa_A            7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH-----PNIVRLHDSISE   81 (444)
T ss_dssp             CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCB-----TTBCCEEEEEEC
T ss_pred             ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC-----cCCCeEEEEEEE
Confidence            45678999999999999999999999999999999998643   2345568899999999977     999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .+..|+||||+ |++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.+             
T Consensus        82 ~~~~~lv~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~-------------  146 (444)
T 3soa_A           82 EGHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASK-------------  146 (444)
T ss_dssp             SSEEEEEECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBS-------------
T ss_pred             CCEEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecc-------------
Confidence            99999999999 999999998865  69999999999999999999999999999999999998642             


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                 ...+.+||+|||++.......   ...+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus       147 -----------~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~  215 (444)
T 3soa_A          147 -----------LKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD  215 (444)
T ss_dssp             -----------STTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             -----------CCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence                       245678999999887654332   346899999999999999999999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+..+....+.......+..                                             ..+.+++.+.+||.+
T Consensus       216 ~~~~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~  250 (444)
T 3soa_A          216 EDQHRLYQQIKAGAYDFPSP---------------------------------------------EWDTVTPEAKDLINK  250 (444)
T ss_dssp             SSHHHHHHHHHHTCCCCCTT---------------------------------------------TTTTSCHHHHHHHHH
T ss_pred             ccHHHHHHHHHhCCCCCCcc---------------------------------------------ccccCCHHHHHHHHH
Confidence            88777776665543333211                                             113456778999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCC
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ||+.||++|||+.|+|+||||+.
T Consensus       251 ~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          251 MLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             HSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             HcCCChhHCCCHHHHhcCccccC
Confidence            99999999999999999999964

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=2.2e-51  Score=397.67  Aligned_cols=319  Identities=30%  Similarity=0.523  Sum_probs=245.1

Q ss_pred             CCCceeecCceec-CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCC------C
Q 047395           82 DGHYLFALGENLT-SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR------S  154 (432)
Q Consensus        82 ~~~~~~~~~~~~~-~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~------~  154 (432)
                      ++.++...++.+. ++|++.+.||+|+||+||+|++..+++.||||++.......+.+.+|+.+++.+.+...      .
T Consensus         5 ~~~~p~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~   84 (373)
T 1q8y_A            5 GGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG   84 (373)
T ss_dssp             --CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHH
T ss_pred             CCceeeecCCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccc
Confidence            3455666666664 68999999999999999999999999999999998766667788899999999985321      1


Q ss_pred             CCceeEeecccccCC----eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCCcEE
Q 047395          155 GSRCVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL-RLIHTDLKPENIL  229 (432)
Q Consensus       155 ~~~iv~~~~~~~~~~----~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIl  229 (432)
                      |+||+++++++...+    .+++|||+++++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||
T Consensus        85 ~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIl  164 (373)
T 1q8y_A           85 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL  164 (373)
T ss_dssp             HTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEE
T ss_pred             cchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeE
Confidence            489999999987543    89999999999999999986556799999999999999999999998 9999999999999


Q ss_pred             eecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHH
Q 047395          230 FVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC  309 (432)
Q Consensus       230 i~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv  309 (432)
                      ++.++.                     .+....+||+|||++..........+||+.|+|||++.+..++.++|||||||
T Consensus       165 l~~~~~---------------------~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~  223 (373)
T 1q8y_A          165 MEIVDS---------------------PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTAC  223 (373)
T ss_dssp             EEEEET---------------------TTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHH
T ss_pred             EeccCC---------------------CcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHH
Confidence            864321                     12445789999999987776666678999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhh
Q 047395          310 ILIELCSGEALFQTHE------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ  383 (432)
Q Consensus       310 il~elltg~~pf~~~~------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (432)
                      ++|+|++|..||.+.+      ..+.+..+...++.+|..++.........+...+............ ...      ..
T Consensus       224 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~  296 (373)
T 1q8y_A          224 LIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWP-LED------VL  296 (373)
T ss_dssp             HHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCC-HHH------HH
T ss_pred             HHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccc-hhh------hh
Confidence            9999999999998654      4567788888999999887765443322221111111000000000 000      00


Q ss_pred             hhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       384 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ..........+..+.+||.+||+.||++|||+.|+|+||||++..
T Consensus       297 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          297 TEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             HHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             hhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence            011112345677899999999999999999999999999999754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=3e-52  Score=396.97  Aligned_cols=290  Identities=28%  Similarity=0.481  Sum_probs=224.2

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ..++|+++++||+|+||+||+|++..+++.||||+++...   .....+.+|+.+++.++|     +||+++++++...+
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~  106 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH-----RNIIELKSVIHHNH  106 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCC-----TTBCCEEEEEEETT
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCC-----CCcceEEEEEecCC
Confidence            3578999999999999999999999999999999996432   223456789998888876     99999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          170 HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       170 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .+|+||||+.++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+..++               
T Consensus       107 ~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~---------------  169 (329)
T 3gbz_A          107 RLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSD---------------  169 (329)
T ss_dssp             EEEEEEECCSEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----------------
T ss_pred             EEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCC---------------
Confidence            999999999889999998865  699999999999999999999999999999999999986533               


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                             .+....+||+|||++.....   .....+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+
T Consensus       170 -------~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  242 (329)
T 3gbz_A          170 -------ASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS  242 (329)
T ss_dssp             ----------CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -------CCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence                   23456689999998875432   233457899999999998754 8999999999999999999999999999


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+.+..+....+.++...+........     ....++....              ..........+++++.+||.+||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~li~~~L  303 (329)
T 3gbz_A          243 EIDQLFKIFEVLGLPDDTTWPGVTALPD-----WKQSFPKFRG--------------KTLKRVLGALLDDEGLDLLTAML  303 (329)
T ss_dssp             HHHHHHHHHHHHCCCCTTTSTTGGGSTT-----CCTTCCCCCC--------------CCHHHHHGGGSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCCchhhhhhhhhhhh-----hhhhhhhhcc--------------ccHhhhcccccCHHHHHHHHHHc
Confidence            9888888888877666443322211100     0001111000              01111122346778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCccC
Q 047395          406 RYDPSSRLTAHDALKHPFFTRDYYR  430 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~~~~  430 (432)
                      +.||++|||++|+|+||||++..++
T Consensus       304 ~~dP~~R~t~~e~l~hp~f~~~~~~  328 (329)
T 3gbz_A          304 EMDPVKRISAKNALEHPYFSHNDFD  328 (329)
T ss_dssp             CSSGGGSCCHHHHHTSGGGSSSCSC
T ss_pred             cCChhhCCCHHHHhCCcccCCCCCC
Confidence            9999999999999999999988764

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=5.4e-52  Score=396.64  Aligned_cols=253  Identities=25%  Similarity=0.396  Sum_probs=213.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHH-HhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|++.+.||+|+||+||+|+++.+++.||||++++..    ........|..++..+ .|     |||+++++++.+.
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~h-----p~iv~l~~~~~~~   90 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH-----PFLTHMFCTFQTK   90 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTC-----TTBCCEEEEEECS
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCC-----CCCCcEEEEEEeC
Confidence            468999999999999999999999999999999997542    2345577888888876 44     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.               
T Consensus        91 ~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---------------  153 (345)
T 1xjd_A           91 ENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK---------------  153 (345)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT---------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECC---------------
Confidence            9999999999 999999998764  6999999999999999999999999999999999999654               


Q ss_pred             CCCccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                  ++.+||+|||+++...   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.
T Consensus       154 ------------~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  221 (345)
T 1xjd_A          154 ------------DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ  221 (345)
T ss_dssp             ------------TSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ------------CCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC
Confidence                        4456666777665421   2234568999999999999999999999999999999999999999988


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+....+.......|                                                 ..++..+.+||.+|
T Consensus       222 ~~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~l  252 (345)
T 1xjd_A          222 DEEELFHSIRMDNPFYP-------------------------------------------------RWLEKEAKDLLVKL  252 (345)
T ss_dssp             SHHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHhCCCCCC-------------------------------------------------cccCHHHHHHHHHH
Confidence            77666655533211111                                                 23456689999999


Q ss_pred             cccCCCCCCCHH-HHhcCCCCCCCcc
Q 047395          405 LRYDPSSRLTAH-DALKHPFFTRDYY  429 (432)
Q Consensus       405 L~~dP~~R~ta~-elL~hp~f~~~~~  429 (432)
                      |+.||++||++. ++++||||++..+
T Consensus       253 L~~dp~~R~~~~~~i~~hp~f~~~~w  278 (345)
T 1xjd_A          253 FVREPEKRLGVRGDIRQHPLFREINW  278 (345)
T ss_dssp             SCSSGGGSBTTBSCGGGSGGGTTCCH
T ss_pred             hcCCHhHcCCChHHHHcCccccCCCH
Confidence            999999999998 9999999998654

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=9.4e-52  Score=396.12  Aligned_cols=253  Identities=26%  Similarity=0.453  Sum_probs=217.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++++.||+|+||.||+|++..+|+.||||+++...    ...+.+.+|+.++..+.|     |||+++++++.+.+
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~~~~  114 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-----PFLVKLEFSFKDNS  114 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC-----TTBCCEEEEEECSS
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCC-----CCCCeEEEEEEcCC
Confidence            478999999999999999999999999999999997543    233567788888887765     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++                 
T Consensus       115 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-----------------  175 (350)
T 1rdq_E          115 NLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-----------------  175 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------
T ss_pred             EEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEEC-----------------
Confidence            999999999 999999998865  699999999999999999999999999999999999964                 


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                .++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       176 ----------~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  245 (350)
T 1rdq_E          176 ----------QQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ  245 (350)
T ss_dssp             ----------TTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ----------CCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH
Confidence                      4556788888887766655666789999999999999999999999999999999999999999877766


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+......+|                                                 ..++..+.+||.+||+.|
T Consensus       246 ~~~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li~~lL~~d  276 (350)
T 1rdq_E          246 IYEKIVSGKVRFP-------------------------------------------------SHFSSDLKDLLRNLLQVD  276 (350)
T ss_dssp             HHHHHHHCCCCCC-------------------------------------------------TTCCHHHHHHHHHHSCSC
T ss_pred             HHHHHHcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHhhcC
Confidence            6655544221111                                                 235666899999999999


Q ss_pred             CCCCCC-----HHHHhcCCCCCCCcc
Q 047395          409 PSSRLT-----AHDALKHPFFTRDYY  429 (432)
Q Consensus       409 P~~R~t-----a~elL~hp~f~~~~~  429 (432)
                      |.+||+     ++|+++||||+...+
T Consensus       277 p~~R~~~~~~~~~ei~~h~~f~~~~w  302 (350)
T 1rdq_E          277 LTKRFGNLKNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             TTTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred             HHhccCCccCCHHHHHhCcCcCCCCH
Confidence            999998     999999999987654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.3e-51  Score=386.92  Aligned_cols=254  Identities=28%  Similarity=0.432  Sum_probs=213.2

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ..++|++.+.||+|+||+||+|.+..+++.||||++.... ...+.+.+|+.++..+.|     |||+++++++...+.+
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~~~~~~   92 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN-----PNIVNYLDSYLVGDEL   92 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCC-----TTBCCEEEEEEETTEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCC-----CCCCeEeEEEEECCEE
Confidence            4578999999999999999999999999999999986433 335567889999988876     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.                  
T Consensus        93 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~------------------  151 (297)
T 3fxz_A           93 WVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM------------------  151 (297)
T ss_dssp             EEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT------------------
T ss_pred             EEEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECC------------------
Confidence            9999999 99999999875   4999999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                               ++.+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       152 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  222 (297)
T 3fxz_A          152 ---------DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL  222 (297)
T ss_dssp             ---------TCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             ---------CCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                     455777777776543322   23457999999999999999999999999999999999999999887766


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .....+.....+..                                              .....+++.+.+||.+||+.
T Consensus       223 ~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~  256 (297)
T 3fxz_A          223 RALYLIATNGTPEL----------------------------------------------QNPEKLSAIFRDFLNRCLEM  256 (297)
T ss_dssp             HHHHHHHHHCSCCC----------------------------------------------SCGGGSCHHHHHHHHHHSCS
T ss_pred             HHHHHHHhCCCCCC----------------------------------------------CCccccCHHHHHHHHHHccC
Confidence            55544432211100                                              01234567789999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||++|||+.|+|+||||+..
T Consensus       257 dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          257 DVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             STTTSCCHHHHTTCGGGGGC
T ss_pred             ChhHCcCHHHHhhChhhccc
Confidence            99999999999999999764

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.1e-51  Score=386.29  Aligned_cols=280  Identities=31%  Similarity=0.488  Sum_probs=221.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|++++.||+|+||+||+|++..+++.||||+++...   .....+.+|+.+++.++|     +||+++++++..++.+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~   76 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-----KNIVRLHDVLHSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCC-----TTBCCEEEEEEETTEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCC-----CCEeeEEeEEEeCCEE
Confidence            57999999999999999999999999999999997432   334567789998888876     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |+||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.                   
T Consensus        77 ~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~-------------------  136 (292)
T 3o0g_A           77 TLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR-------------------  136 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-------------------
T ss_pred             EEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-------------------
Confidence            9999999888888887644 46999999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCCC-CCCCCc
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEAL-FQTHEN  326 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~p-f~~~~~  326 (432)
                              ++.+||+|||++.....   .....+||+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+.
T Consensus       137 --------~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~  208 (292)
T 3o0g_A          137 --------NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV  208 (292)
T ss_dssp             --------TSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH
T ss_pred             --------CCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH
Confidence                    45677777777765432   223457899999999998766 79999999999999999987766 666677


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+.+..+.+..+.++...+.........      ..++...              ...........+++.+++||.+||+
T Consensus       209 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--------------~~~~~~~~~~~~~~~~~~li~~~L~  268 (292)
T 3o0g_A          209 DDQLKRIFRLLGTPTEEQWPSMTKLPDY------KPYPMYP--------------ATTSLVNVVPKLNATGRDLLQNLLK  268 (292)
T ss_dssp             HHHHHHHHHHHCCCCTTTCTTGGGSTTC------CCCCCCC--------------TTCCCTTTSTTCCHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhCCCChhhhhhhcccccc------ccccccc--------------CCcchhhcccccChHHHHHHHHHhc
Confidence            7888888888887665433322211100      0000000              0000112234567889999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 047395          407 YDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .||++|||++|+|+||||++.
T Consensus       269 ~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          269 CNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             SSGGGSCCHHHHHTSGGGTTC
T ss_pred             cChhhCCCHHHHhcCcccccC
Confidence            999999999999999999874

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.8e-51  Score=390.91  Aligned_cols=263  Identities=28%  Similarity=0.498  Sum_probs=222.7

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh-------hhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      +.+.++|++.+.||+|+||.||+|.+..+++.||+|+++....       ..+.+.+|+.++..++|     |||+++++
T Consensus         7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~   81 (326)
T 2y0a_A            7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH-----PNVITLHE   81 (326)
T ss_dssp             SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCC-----TTBCCEEE
T ss_pred             CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCC-----CCCCcEEE
Confidence            4567889999999999999999999999999999999974321       24678899999999876     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ++...+.+++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++        
T Consensus        82 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~--------  151 (326)
T 2y0a_A           82 VYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN--------  151 (326)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS--------
T ss_pred             EEEeCCEEEEEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCC--------
Confidence            999999999999999 899999997654  699999999999999999999999999999999999986533        


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                     .....+||+|||++.....  .....+||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       152 ---------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  216 (326)
T 2y0a_A          152 ---------------VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP  216 (326)
T ss_dssp             ---------------SSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred             ---------------CCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCC
Confidence                           1233688999998876432  23446799999999999998999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+..+.+..+.......+...                                             ...++..+.+|
T Consensus       217 f~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~l  251 (326)
T 2y0a_A          217 FLGDTKQETLANVSAVNYEFEDEY---------------------------------------------FSNTSALAKDF  251 (326)
T ss_dssp             SCCSSHHHHHHHHHHTCCCCCHHH---------------------------------------------HTTSCHHHHHH
T ss_pred             CCCCCHHHHHHHHHhcCCCcCccc---------------------------------------------cccCCHHHHHH
Confidence            998877776666554433333221                                             12456678999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      |.+||+.||++|||+.|+|+||||+...
T Consensus       252 i~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          252 IRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             HHHHccCChhhCCCHHHHhcCCCccCCc
Confidence            9999999999999999999999998754

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1e-51  Score=391.23  Aligned_cols=289  Identities=31%  Similarity=0.523  Sum_probs=214.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .++|++++.||+|+||+||+|.+..+++.||||+++...  .....+.+|+.+++.++|     +||+++++++..++.+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~~~~~~   78 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH-----ENIVRLYDVIHTENKL   78 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCB-----TTBCCEEEEECCTTEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCC-----CCcceEEEEEEECCeE
Confidence            467999999999999999999999999999999997432  234567889999988876     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          172 CIVFEMLGPSLYDFLRKNN----YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      |+||||+.++|.+++....    ...+++..++.++.||+.||.|||++||+||||||+|||++.               
T Consensus        79 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~---------------  143 (317)
T 2pmi_A           79 TLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINK---------------  143 (317)
T ss_dssp             EEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---------------
T ss_pred             EEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcC---------------
Confidence            9999999889999997642    135899999999999999999999999999999999999654               


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                  ++.+||+|||++.....   .....+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+
T Consensus       144 ------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  211 (317)
T 2pmi_A          144 ------------RGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPG  211 (317)
T ss_dssp             ------------TCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ------------CCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                        45677777777665432   22345789999999999874 589999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+..+.+..+....+.++...+..........     ...+....  .        .............++..+.+||.+
T Consensus       212 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~--------~~~~~~~~~~~~~~~~~l~~li~~  276 (317)
T 2pmi_A          212 TNDEEQLKLIFDIMGTPNESLWPSVTKLPKYN-----PNIQQRPP--R--------DLRQVLQPHTKEPLDGNLMDFLHG  276 (317)
T ss_dssp             SSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCC-----TTCCCCCC--C--------CSHHHHGGGCSSCCCHHHHHHHHH
T ss_pred             CChHHHHHHHHHHhCCCChhHhhhhhhhhhcc-----cccccccc--h--------hHHHhhcccccccCCHHHHHHHHH
Confidence            99999999998888877765544332211100     00000000  0        000111122234577889999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ||+.||++|||+.|+|+||||++.+.
T Consensus       277 ~L~~dP~~Rpt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          277 LLQLNPDMRLSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             HSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred             HCCCCcccCCCHHHHhCChhhhcccc
Confidence            99999999999999999999987553

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=2.5e-51  Score=398.14  Aligned_cols=254  Identities=23%  Similarity=0.405  Sum_probs=207.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|+++++||+|+||+||+|++..+++.||||++++..    .....+..|..++..+..    ||||+++++++...+
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~----hp~Iv~l~~~~~~~~  126 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN----HPFLVGLHSCFQTES  126 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTT----CTTBCCEEEEEECSS
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCC----CCCcCeeEEEEEECC
Confidence            468999999999999999999999999999999997542    223457788888887732    399999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.                
T Consensus       127 ~~~lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~----------------  188 (396)
T 4dc2_A          127 RLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS----------------  188 (396)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT----------------
T ss_pred             EEEEEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECC----------------
Confidence            999999999 999999998765  6999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                 ++.+||+|||+++..   .......+||+.|+|||++.+..++.++|||||||++|||++|..||....
T Consensus       189 -----------~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~  257 (396)
T 4dc2_A          189 -----------EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG  257 (396)
T ss_dssp             -----------TSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTT
T ss_pred             -----------CCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence                       455677777766542   223445689999999999999999999999999999999999999997533


Q ss_pred             cHH---------HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          326 NLE---------HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       326 ~~~---------~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      ..+         ....+...                       ..                          ..+..++..
T Consensus       258 ~~~~~~~~~~~~~~~~i~~~-----------------------~~--------------------------~~p~~~s~~  288 (396)
T 4dc2_A          258 SSDNPDQNTEDYLFQVILEK-----------------------QI--------------------------RIPRSLSVK  288 (396)
T ss_dssp             C------CCHHHHHHHHHHC-----------------------CC--------------------------CCCTTSCHH
T ss_pred             cccccchhhHHHHHHHHhcc-----------------------cc--------------------------CCCCcCCHH
Confidence            211         11111110                       01                          112346777


Q ss_pred             HHHHHHHccccCCCCCCCH------HHHhcCCCCCCCcc
Q 047395          397 LIDLLQGLLRYDPSSRLTA------HDALKHPFFTRDYY  429 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta------~elL~hp~f~~~~~  429 (432)
                      +.+||.+||+.||++||++      +|+++||||++..|
T Consensus       289 ~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w  327 (396)
T 4dc2_A          289 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  327 (396)
T ss_dssp             HHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCH
T ss_pred             HHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCH
Confidence            9999999999999999985      79999999998655

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2e-51  Score=383.89  Aligned_cols=279  Identities=31%  Similarity=0.495  Sum_probs=217.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|++++.||+|+||+||+|++ .+++.||+|+++...   .....+.+|+.+++.++|     +||+++++++...+.+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~   75 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH-----SNIVKLYDVIHTKKRL   75 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCC-----TTBCCEEEEEECSSCE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCC-----CCEeeeeeEEccCCeE
Confidence            5799999999999999999998 678999999986432   223567789999888876     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |+||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.                   
T Consensus        76 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-------------------  135 (288)
T 1ob3_A           76 VLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR-------------------  135 (288)
T ss_dssp             EEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-------------------
T ss_pred             EEEEEecCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC-------------------
Confidence            9999999889999998754 46999999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                              ++.+||+|||++.....   ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..
T Consensus       136 --------~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~  207 (288)
T 1ob3_A          136 --------EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA  207 (288)
T ss_dssp             --------TSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             --------CCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                    45677777777654332   22335789999999999764 5899999999999999999999999999888


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +.+..+.+..+..+...+........ +    ....+....               .........+++.+.+||.+||+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~---------------~~~~~~~~~~~~~~~~li~~~L~~  267 (288)
T 1ob3_A          208 DQLMRIFRILGTPNSKNWPNVTELPK-Y----DPNFTVYEP---------------LPWESFLKGLDESGIDLLSKMLKL  267 (288)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGSTT-C----CTTCCCCCC---------------CCGGGTCCSCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHCCCChhhchhhhcccc-c----ccccccccC---------------ccHHHHhhhcCHHHHHHHHHHcCC
Confidence            88888888777655432222111000 0    000000000               000112345678899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||++|||++|+|+||||++.
T Consensus       268 dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          268 DPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             STTTSCCHHHHHTSGGGGC-
T ss_pred             CcccCCCHHHHhcCcchhhc
Confidence            99999999999999999875

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=8.4e-51  Score=400.98  Aligned_cols=303  Identities=27%  Similarity=0.420  Sum_probs=223.6

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.++|++.+.||+|+||.||+|++..+++.||||+++..   ......+.+|+.+++.++|     +||+++++++...
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~nIv~l~~~~~~~   97 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS-----DYIIRLYDLIIPD   97 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCC-----TTBCCEEEECCCS
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCC-----CCcceEEEEEecC
Confidence            4568999999999999999999999999999999999742   2344678899999999876     9999999998765


Q ss_pred             -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          169 -----NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       169 -----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                           +.+|+||||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        98 ~~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGl  175 (432)
T 3n9x_A           98 DLLKFDELYIVLEIADSDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGL  175 (432)
T ss_dssp             CTTTCCCEEEEEECCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CCCcCCeEEEEEecCCcCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCC
Confidence                 6799999999889999998754  699999999999999999999999999999999999987766666666666


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCc-------ccccCCccccccCCCcchhHHHh-CCCCCccchHHHHHHHHHHHH
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGST-------AYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a-------~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDiwSlGvil~ell  315 (432)
                      +.........         ....++...       ..........+||+.|+|||++. +..++.++|||||||++|||+
T Consensus       176 a~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell  246 (432)
T 3n9x_A          176 ARTINSEKDT---------NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL  246 (432)
T ss_dssp             CEEC----------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred             cccccccccc---------cccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHH
Confidence            5432211000         000000000       00001224568999999999974 556999999999999999999


Q ss_pred             h-----------CCCCCCCCC-----------------cHHHHHHHHHHhCCCCHHHHHhcCCcch-hhhccCCcCCCCC
Q 047395          316 S-----------GEALFQTHE-----------------NLEHLAMMERVLGPIPQHMLKRVDKPAE-KFVRRGRLDWPEG  366 (432)
Q Consensus       316 t-----------g~~pf~~~~-----------------~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~  366 (432)
                      +           |.++|.+.+                 ..+++..+...+|.++...+..+..... .++.......+  
T Consensus       247 ~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~--  324 (432)
T 3n9x_A          247 NMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKP--  324 (432)
T ss_dssp             TTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCC--
T ss_pred             hcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCC--
Confidence            8           455554443                 3678888999999999887766543221 11111000000  


Q ss_pred             CCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          367 ATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                                       .......+.+++.+.+||.+||++||++|||++|+|+||||++...
T Consensus       325 -----------------~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  370 (432)
T 3n9x_A          325 -----------------INLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK  370 (432)
T ss_dssp             -----------------CCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred             -----------------CCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence                             0011123457888999999999999999999999999999987544

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.1e-51  Score=398.33  Aligned_cols=283  Identities=27%  Similarity=0.504  Sum_probs=213.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.++|++++.||+|+||.||+|.+..+|+.||||++...   ......+.+|+.+++.++|     +||+++++++...
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pnIv~~~~~~~~~  100 (367)
T 2fst_X           26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH-----ENVIGLLDVFTPA  100 (367)
T ss_dssp             EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCC-----TTBCCCSEEECSC
T ss_pred             CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCC-----CCCCcEEEEEecC
Confidence            3568999999999999999999999999999999998642   2344567789999998876     9999999988643


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          169 ------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       169 ------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                            ..+|+|||+++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.          
T Consensus       101 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~----------  167 (367)
T 2fst_X          101 RSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE----------  167 (367)
T ss_dssp             SSGGGCCCCEEEEECCCEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT----------
T ss_pred             CccccCCeEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECC----------
Confidence                  568999999999999998763   5999999999999999999999999999999999999654          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                       ++.+||+|||+++.........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus       168 -----------------~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf  230 (367)
T 2fst_X          168 -----------------DCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF  230 (367)
T ss_dssp             -----------------TCCEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred             -----------------CCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                             456777777777665555556789999999999987 57899999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+..+.+..+.+..+.++...+..+...............+.              .    .........++.+.+||
T Consensus       231 ~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------~----~~~~~~~~~~~~~~dLl  292 (367)
T 2fst_X          231 PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK--------------M----NFANVFIGANPLAVDLL  292 (367)
T ss_dssp             CCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCC--------------C----CHHHHTTTCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCC--------------C----CHHHHCCCCCHHHHHHH
Confidence            99999999999999999998887766543321111110000000              0    00112235677899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .+||+.||++|||+.|+|+||||++.
T Consensus       293 ~~mL~~dP~~R~t~~e~L~hp~~~~~  318 (367)
T 2fst_X          293 EKMLVLDSDKRITAAQALAHAYFAQY  318 (367)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHhCCCCcccCcCHHHHhcChhhhhc
Confidence            99999999999999999999999864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=4.5e-51  Score=392.19  Aligned_cols=260  Identities=28%  Similarity=0.440  Sum_probs=214.3

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh------hhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK------YREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      .+.++|++.+.||+|+||+||+|++..+++.||||+++....      ..+.+.+|+.++..++|     +||+++++++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pnIv~~~~~~   95 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH-----PHIVELLETY   95 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCC-----TTBCCEEEEE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCC-----CCCCcEEEEE
Confidence            456789999999999999999999999999999999974321      34678899999999876     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNN--YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ...+.+|+||||+ +++|.+++....  ...+++..++.++.||+.||.|||++||+||||||+|||++.++        
T Consensus        96 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~--------  167 (351)
T 3c0i_A           96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE--------  167 (351)
T ss_dssp             EETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSS--------
T ss_pred             EeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCC--------
Confidence            9999999999999 899998886532  23589999999999999999999999999999999999986532        


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                      ....+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       168 ----------------~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  231 (351)
T 3c0i_A          168 ----------------NSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCL  231 (351)
T ss_dssp             ----------------TTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ----------------CCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCC
Confidence                            2345889999988765433   234579999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.. .+....+.......+.                                             .....+++.+.+
T Consensus       232 pf~~~~-~~~~~~i~~~~~~~~~---------------------------------------------~~~~~~s~~~~~  265 (351)
T 3c0i_A          232 PFYGTK-ERLFEGIIKGKYKMNP---------------------------------------------RQWSHISESAKD  265 (351)
T ss_dssp             SSCSSH-HHHHHHHHHTCCCCCH---------------------------------------------HHHTTSCHHHHH
T ss_pred             CCCCcH-HHHHHHHHcCCCCCCc---------------------------------------------cccccCCHHHHH
Confidence            998743 2333333222111111                                             112345677899


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ||.+||+.||++|||+.|+|+||||++
T Consensus       266 li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          266 LVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            999999999999999999999999976

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.6e-51  Score=401.62  Aligned_cols=258  Identities=23%  Similarity=0.414  Sum_probs=215.0

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ..++|++++.||+|+||+||+|++..+++.||+|++++...    ....+.+|+.++..+.|     |||+++++++.+.
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~h-----p~Iv~l~~~~~~~  141 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS-----PWVVQLFYAFQDD  141 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCC-----TTBCCEEEEEECS
T ss_pred             CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCC-----CCCCeEEEEEEEC
Confidence            35789999999999999999999999999999999975332    23457789999988876     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ ||+|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.               
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~---------------  203 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK---------------  203 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECC---------------
Confidence            9999999999 99999999875   4999999999999999999999999999999999999654               


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCC----CCccchHHHHHHHHHHHHhCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~sDiwSlGvil~elltg~~  319 (432)
                                  ++.+||+|||++......    ....+||+.|+|||++.+..    ++.++|||||||++|||++|..
T Consensus       204 ------------~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~  271 (410)
T 3v8s_A          204 ------------SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT  271 (410)
T ss_dssp             ------------TSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSC
T ss_pred             ------------CCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCC
Confidence                        456677777776544332    23568999999999998765    7899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.+..+....|......+                     .+|                        ....++..+.+
T Consensus       272 Pf~~~~~~~~~~~i~~~~~~~---------------------~~p------------------------~~~~~s~~~~~  306 (410)
T 3v8s_A          272 PFYADSLVGTYSKIMNHKNSL---------------------TFP------------------------DDNDISKEAKN  306 (410)
T ss_dssp             TTCCSSHHHHHHHHHTHHHHC---------------------CCC------------------------TTCCCCHHHHH
T ss_pred             CCCCCChhhHHHHHHhccccc---------------------cCC------------------------CcccccHHHHH
Confidence            999888777666654321100                     000                        11246777999


Q ss_pred             HHHHccccCCCC--CCCHHHHhcCCCCCCCccC
Q 047395          400 LLQGLLRYDPSS--RLTAHDALKHPFFTRDYYR  430 (432)
Q Consensus       400 li~~~L~~dP~~--R~ta~elL~hp~f~~~~~~  430 (432)
                      ||.+||+.+|.+  |++++||++||||++..|+
T Consensus       307 li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~  339 (410)
T 3v8s_A          307 LICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA  339 (410)
T ss_dssp             HHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCC
T ss_pred             HHHHHccChhhhCCCCCHHHHhcCccccCCCHH
Confidence            999999999998  9999999999999987653

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=6.6e-51  Score=390.35  Aligned_cols=254  Identities=24%  Similarity=0.364  Sum_probs=211.8

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++++.||+|+||+||+|++..+++.||||++++..    ...+.+..|..++..+.    .|++|+++++++...+
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~----~hp~iv~l~~~~~~~~   94 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG----KPPFLTQLHSCFQTMD   94 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTT----CCTTBCCEEEEEECSS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcC----CCCEEeeEEEEEEcCC
Confidence            468999999999999999999999999999999997543    22345667777766552    3599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ |++|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||++.                
T Consensus        95 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~----------------  156 (353)
T 2i0e_A           95 RLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS----------------  156 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT----------------
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcC----------------
Confidence            999999999 899999998765  6999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                 ++.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+
T Consensus       157 -----------~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~  225 (353)
T 2i0e_A          157 -----------EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED  225 (353)
T ss_dssp             -----------TSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -----------CCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC
Confidence                       445666677766542   122345689999999999999999999999999999999999999999887


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....+......+|                                                 ..++..+.+||.+||
T Consensus       226 ~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~lL  256 (353)
T 2i0e_A          226 EDELFQSIMEHNVAYP-------------------------------------------------KSMSKEAVAICKGLM  256 (353)
T ss_dssp             HHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCC-------------------------------------------------CCCCHHHHHHHHHHh
Confidence            7666665544222111                                                 245667899999999


Q ss_pred             ccCCCCCCC-----HHHHhcCCCCCCCcc
Q 047395          406 RYDPSSRLT-----AHDALKHPFFTRDYY  429 (432)
Q Consensus       406 ~~dP~~R~t-----a~elL~hp~f~~~~~  429 (432)
                      +.||.+||+     ++++++||||+...+
T Consensus       257 ~~dP~~R~~~~~~~~~~i~~h~~f~~~~w  285 (353)
T 2i0e_A          257 TKHPGKRLGCGPEGERDIKEHAFFRYIDW  285 (353)
T ss_dssp             CSCTTSCTTCSTTHHHHHHTSGGGTTCCH
T ss_pred             hcCHHHcCCCCCCCHHHHhcCccccCCCH
Confidence            999999994     799999999987654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.4e-51  Score=391.58  Aligned_cols=282  Identities=29%  Similarity=0.476  Sum_probs=219.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh--hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++|++++.||+|+||+||+|++..+++.||||+++....  ....+.+|+.+++.++|     +||+++++++...+..|
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~~   76 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH-----ANIVTLHDIIHTEKSLT   76 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCC-----TTBCCEEEEEECSSCEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCC-----CCCCeeeeEEeeCCEEE
Confidence            579999999999999999999999999999999874332  22245678988888876     99999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.                    
T Consensus        77 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~--------------------  135 (324)
T 3mtl_A           77 LVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINE--------------------  135 (324)
T ss_dssp             EEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECT--------------------
T ss_pred             EEecccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECC--------------------
Confidence            999999889999998765 46999999999999999999999999999999999999654                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                             ++.+||+|||++......   ....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+
T Consensus       136 -------~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  208 (324)
T 3mtl_A          136 -------RGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE  208 (324)
T ss_dssp             -------TCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             -------CCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                   445677777766543322   233478999999999987 568999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .+..+.+..+.++...+...........    ..++..               ...........+++.+.+||.+||+.|
T Consensus       209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~~L~~d  269 (324)
T 3mtl_A          209 QLHFIFRILGTPTEETWPGILSNEEFKT----YNYPKY---------------RAEALLSHAPRLDSDGADLLTKLLQFE  269 (324)
T ss_dssp             HHHHHHHHHCCCCTTTSTTGGGCHHHHH----TCCCCC---------------CCCCHHHHCTTSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHHHhCCCChHhchhhhcchhhcc----cccccc---------------cchhhhhhcCCCCHHHHHHHHHHcCcC
Confidence            9999999888776543332211110000    000000               001112233467788999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCc
Q 047395          409 PSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~  428 (432)
                      |++|||++|+|+||||++..
T Consensus       270 P~~R~t~~e~l~hp~f~~~~  289 (324)
T 3mtl_A          270 GRNRISAEDAMKHPFFLSLG  289 (324)
T ss_dssp             GGGSCCHHHHTTSGGGGGGC
T ss_pred             cccCCCHHHHhcChhhhhcc
Confidence            99999999999999998654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=4e-51  Score=392.16  Aligned_cols=261  Identities=27%  Similarity=0.450  Sum_probs=203.5

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +.+.++|++.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|+.++..+.|     +||+++++++...+.
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~~~  122 (349)
T 2w4o_A           49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSH-----PNIIKLKEIFETPTE  122 (349)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCC-----TTBCCEEEEEECSSE
T ss_pred             ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCC-----CCCcceeeeEecCCe
Confidence            456789999999999999999999999999999999997543 34567789999999876     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.                 
T Consensus       123 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~-----------------  183 (349)
T 2w4o_A          123 ISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYAT-----------------  183 (349)
T ss_dssp             EEEEECCCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESS-----------------
T ss_pred             EEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEec-----------------
Confidence            99999999 899999998754  6999999999999999999999999999999999999864                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                             .+.++.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus       184 -------~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  256 (349)
T 2w4o_A          184 -------PAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD  256 (349)
T ss_dssp             -------SSTTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH
T ss_pred             -------CCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc
Confidence                   124567888888887754332  23457999999999999999999999999999999999999999876654


Q ss_pred             H-HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          328 E-HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       328 ~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      . ....+.......+                                             ....+.++..+.+||.+||+
T Consensus       257 ~~~~~~i~~~~~~~~---------------------------------------------~~~~~~~~~~~~~li~~~L~  291 (349)
T 2w4o_A          257 QFMFRRILNCEYYFI---------------------------------------------SPWWDEVSLNAKDLVRKLIV  291 (349)
T ss_dssp             HHHHHHHHTTCCCCC---------------------------------------------TTTTTTSCHHHHHHHHTTSC
T ss_pred             HHHHHHHHhCCCccC---------------------------------------------CchhhhCCHHHHHHHHHHcc
Confidence            4 2222222111110                                             01123456778999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCc
Q 047395          407 YDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .||++|||+.|+|+||||++..
T Consensus       292 ~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          292 LDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             SSGGGSCCHHHHHHSTTTTSTT
T ss_pred             CChhhCcCHHHHhcCcccCCCc
Confidence            9999999999999999998754

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=9.6e-51  Score=392.91  Aligned_cols=294  Identities=28%  Similarity=0.499  Sum_probs=233.0

Q ss_pred             CCCCCceeecCce---ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCC
Q 047395           80 DKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDR  153 (432)
Q Consensus        80 ~~~~~~~~~~~~~---~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~  153 (432)
                      .+.+.+....+..   +.++|++.+.||+|+||+||+|++..+|+.||||++...   ......+.+|+.+++.++|   
T Consensus        24 ~~~g~~~~~~~~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h---  100 (371)
T 4exu_A           24 RKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH---  100 (371)
T ss_dssp             SCTTEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCC---
T ss_pred             ccccceeeeeccceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCC---
Confidence            3455555555443   678999999999999999999999999999999999742   3345677889999998876   


Q ss_pred             CCCceeEeecccccCCeE------EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCc
Q 047395          154 SGSRCVQIRNWFDYRNHI------CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPEN  227 (432)
Q Consensus       154 ~~~~iv~~~~~~~~~~~~------~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  227 (432)
                        +||+++++++...+..      |+||||++++|.+++..    .+++..++.++.||+.||.|||++||+||||||+|
T Consensus       101 --~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N  174 (371)
T 4exu_A          101 --ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN  174 (371)
T ss_dssp             --TTBCCCSEEECSCSSSTTCCCCEEEEECCCEEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             --CCchhhhhheeccCCcccceeEEEEEccccccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHH
Confidence              9999999999876544      99999998899888743    49999999999999999999999999999999999


Q ss_pred             EEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC-CCCCccchHHH
Q 047395          228 ILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWS  306 (432)
Q Consensus       228 Ili~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwS  306 (432)
                      ||++                           .++.+||+|||++..........+||+.|+|||++.+ ..++.++||||
T Consensus       175 Ill~---------------------------~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws  227 (371)
T 4exu_A          175 LAVN---------------------------EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWS  227 (371)
T ss_dssp             EEEC---------------------------TTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHH
T ss_pred             eEEC---------------------------CCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHH
Confidence            9964                           4556788888888766666666789999999999987 67899999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhh
Q 047395          307 VGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV  386 (432)
Q Consensus       307 lGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (432)
                      |||++|+|++|..||.+.+..+.+..+....+.++..+...................                +  ....
T Consensus       228 lG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~--~~~~  289 (371)
T 4exu_A          228 VGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT----------------P--RKDF  289 (371)
T ss_dssp             HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCC----------------C--CCCH
T ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCC----------------c--chhH
Confidence            999999999999999999999999999999999888776655432221110000000                0  0001


Q ss_pred             hhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       387 ~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ....+.+++.+.+||.+||+.||++|||+.|+|+||||+..
T Consensus       290 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          290 TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             HHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence            12234567889999999999999999999999999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=9.1e-51  Score=388.68  Aligned_cols=254  Identities=23%  Similarity=0.398  Sum_probs=206.0

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++++.||+|+||.||+|++..+++.||||++++..    .....+.+|..++..+.    .||||+++++++...+
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~----~hp~iv~l~~~~~~~~   83 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS----NHPFLVGLHSCFQTES   83 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTT----TCTTBCCEEEEEECSS
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcC----CCCccCeEEEEEEeCC
Confidence            468999999999999999999999999999999997532    33455778888888762    2399999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.+               
T Consensus        84 ~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---------------  146 (345)
T 3a8x_A           84 RLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE---------------  146 (345)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---------------
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCC---------------
Confidence            999999999 899999998764  69999999999999999999999999999999999997654               


Q ss_pred             CCccccccCCCCCCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                  +.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|||++|..||....
T Consensus       147 ------------g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  214 (345)
T 3a8x_A          147 ------------GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG  214 (345)
T ss_dssp             ------------SCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTT
T ss_pred             ------------CCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcc
Confidence                        45666666665532   122345689999999999999999999999999999999999999997532


Q ss_pred             cH---------HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          326 NL---------EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       326 ~~---------~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      ..         .....+...                       ..                          ..+..++..
T Consensus       215 ~~~~~~~~~~~~~~~~i~~~-----------------------~~--------------------------~~p~~~s~~  245 (345)
T 3a8x_A          215 SSDNPDQNTEDYLFQVILEK-----------------------QI--------------------------RIPRSLSVK  245 (345)
T ss_dssp             C-------CHHHHHHHHHHC-----------------------CC--------------------------CCCTTSCHH
T ss_pred             cccccccccHHHHHHHHHcC-----------------------CC--------------------------CCCCCCCHH
Confidence            11         111111110                       00                          112345677


Q ss_pred             HHHHHHHccccCCCCCCCH------HHHhcCCCCCCCcc
Q 047395          397 LIDLLQGLLRYDPSSRLTA------HDALKHPFFTRDYY  429 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta------~elL~hp~f~~~~~  429 (432)
                      +.+||.+||+.||.+||++      +|+++||||++..+
T Consensus       246 ~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w  284 (345)
T 3a8x_A          246 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  284 (345)
T ss_dssp             HHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCH
T ss_pred             HHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCH
Confidence            8999999999999999995      89999999987654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.7e-52  Score=397.27  Aligned_cols=255  Identities=25%  Similarity=0.402  Sum_probs=209.5

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      .....++|++.+.||+|+||+||+|++..+++.||||++....    .....+.+|+.+++.++|     |||+++++++
T Consensus         4 ~~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pnIv~l~~~~   78 (336)
T 3h4j_B            4 SKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH-----PHIIKLYDVI   78 (336)
T ss_dssp             CCSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCC-----TTBCCEEEEE
T ss_pred             CccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCC-----CCCCeEEEEE
Confidence            3445678999999999999999999999999999999997532    223467889999988876     9999999999


Q ss_pred             ccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          166 DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       166 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      ...+.+++||||++|+|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.             
T Consensus        79 ~~~~~~~lv~E~~~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~-------------  143 (336)
T 3h4j_B           79 TTPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDD-------------  143 (336)
T ss_dssp             ECSSEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECT-------------
T ss_pred             EeCCEEEEEEECCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcC-------------
Confidence            9999999999999999999998765  6999999999999999999999999999999999999654             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhCCCCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                    ++.+||+|||++......  ....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.
T Consensus       144 --------------~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~  209 (336)
T 3h4j_B          144 --------------NLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD  209 (336)
T ss_dssp             --------------TCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSB
T ss_pred             --------------CCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCC
Confidence                          456777777776653322  344679999999999988776 689999999999999999999997


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.......                       ..+..+..                          ..++.+++.+.+||.
T Consensus       210 ~~~~~~~~-----------------------~~i~~~~~--------------------------~~p~~~s~~~~~li~  240 (336)
T 3h4j_B          210 DEFIPNLF-----------------------KKVNSCVY--------------------------VMPDFLSPGAQSLIR  240 (336)
T ss_dssp             CSSSTTCB-----------------------CCCCSSCC--------------------------CCCTTSCHHHHHHHH
T ss_pred             CccHHHHH-----------------------HHHHcCCC--------------------------CCcccCCHHHHHHHH
Confidence            54321100                       00000011                          112345677899999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +||+.||.+|||++|+++||||+..
T Consensus       241 ~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          241 RMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             TTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             HHcCCChhHCcCHHHHHhChhhccC
Confidence            9999999999999999999999764

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=4.6e-51  Score=401.32  Aligned_cols=263  Identities=24%  Similarity=0.385  Sum_probs=215.9

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ...++|+++++||+|+||+||+|++..+++.||+|++++...    ....+.+|+.++..+.|     +||+++++++.+
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~h-----p~Iv~l~~~~~~  145 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS-----KWITTLHYAFQD  145 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCT-----TTBCCEEEEEEC
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCC-----CCEEEEEEEEee
Confidence            345789999999999999999999999999999999975322    22347789999888766     999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .+.+|+||||+ ||+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.              
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~--------------  210 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM--------------  210 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--------------
T ss_pred             CCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcC--------------
Confidence            99999999999 999999998743 36999999999999999999999999999999999999654              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHh-----CCCCCccchHHHHHHHHHHHHhC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvil~elltg  317 (432)
                                   ++.+||+|||++......    ....+||+.|+|||++.     ...++.++|||||||++|||++|
T Consensus       211 -------------~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG  277 (437)
T 4aw2_A          211 -------------NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG  277 (437)
T ss_dssp             -------------TSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHS
T ss_pred             -------------CCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhC
Confidence                         455677777766543222    22358999999999997     45689999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ..||.+.+..+....+......+                     .+|.                       ....+++++
T Consensus       278 ~~Pf~~~~~~~~~~~i~~~~~~~---------------------~~p~-----------------------~~~~~s~~~  313 (437)
T 4aw2_A          278 ETPFYAESLVETYGKIMNHKERF---------------------QFPT-----------------------QVTDVSENA  313 (437)
T ss_dssp             SCTTCCSSHHHHHHHHHTHHHHC---------------------CCCS-----------------------SCCCSCHHH
T ss_pred             CCCCCCCChhHHHHhhhhccccc---------------------cCCc-----------------------ccccCCHHH
Confidence            99999888777766654321100                     0110                       112467779


Q ss_pred             HHHHHHccccCCCC--CCCHHHHhcCCCCCCCccCC
Q 047395          398 IDLLQGLLRYDPSS--RLTAHDALKHPFFTRDYYRR  431 (432)
Q Consensus       398 ~~li~~~L~~dP~~--R~ta~elL~hp~f~~~~~~~  431 (432)
                      .+||.+||+.+|++  |++++|+++||||++..|+.
T Consensus       314 ~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~  349 (437)
T 4aw2_A          314 KDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDN  349 (437)
T ss_dssp             HHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTT
T ss_pred             HHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHH
Confidence            99999999999988  99999999999999877653

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-50  Score=393.47  Aligned_cols=261  Identities=27%  Similarity=0.492  Sum_probs=219.4

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++... ......+.+|+.++..+.|     +||+++++++...+.
T Consensus        48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~h-----pnIv~~~~~~~~~~~  122 (387)
T 1kob_A           48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH-----PKLINLHDAFEDKYE  122 (387)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCS-----TTBCCEEEEEECSSE
T ss_pred             ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCC-----cCCCeEEEEEEeCCE
Confidence            3467899999999999999999999999999999999753 2334568889999988876     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+                
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~----------------  185 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK----------------  185 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST----------------
T ss_pred             EEEEEEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecC----------------
Confidence            99999999 899999997653 369999999999999999999999999999999999997532                


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                               ..+.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       186 ---------~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~  256 (387)
T 1kob_A          186 ---------KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL  256 (387)
T ss_dssp             ---------TCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred             ---------CCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH
Confidence                     3456888999988765433  23457999999999999999999999999999999999999999988776


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +.+..+.......+.                                             .....+++.+.+||.+||+.
T Consensus       257 ~~~~~i~~~~~~~~~---------------------------------------------~~~~~~s~~~~~li~~~L~~  291 (387)
T 1kob_A          257 ETLQNVKRCDWEFDE---------------------------------------------DAFSSVSPEAKDFIKNLLQK  291 (387)
T ss_dssp             HHHHHHHHCCCCCCS---------------------------------------------STTTTSCHHHHHHHHTTSCS
T ss_pred             HHHHHHHhCCCCCCc---------------------------------------------cccccCCHHHHHHHHHHcCC
Confidence            666555433221110                                             01124567789999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCc
Q 047395          408 DPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||++|||+.|+|+||||++..
T Consensus       292 dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          292 EPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             SGGGSCCHHHHHTSTTTSSCC
T ss_pred             ChhHCcCHHHHhhCccccCCc
Confidence            999999999999999998754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=3.8e-51  Score=389.05  Aligned_cols=275  Identities=26%  Similarity=0.419  Sum_probs=226.5

Q ss_pred             CceeecCceecCceEEE-eeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCcee
Q 047395           84 HYLFALGENLTSRYKIL-RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCV  159 (432)
Q Consensus        84 ~~~~~~~~~~~~~y~i~-~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv  159 (432)
                      ...+..++.+.++|.+. +.||+|+||.||+|++..+++.||||+++...   .....+.+|+.++..+.+    |+||+
T Consensus        17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~----~~~iv   92 (327)
T 3lm5_A           17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKS----CPRVI   92 (327)
T ss_dssp             CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTT----CTTBC
T ss_pred             hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccC----CCCEE
Confidence            34466678889999998 89999999999999999999999999987432   234577889999888764    49999


Q ss_pred             EeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcccc
Q 047395          160 QIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI  238 (432)
Q Consensus       160 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~  238 (432)
                      ++++++...+.+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.      
T Consensus        93 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~------  166 (327)
T 3lm5_A           93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSS------  166 (327)
T ss_dssp             CEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESC------
T ss_pred             EEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEec------
Confidence            9999999999999999999 889999987654457999999999999999999999999999999999999864      


Q ss_pred             CCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh
Q 047395          239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       239 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt  316 (432)
                                        ....+.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       167 ------------------~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  228 (327)
T 3lm5_A          167 ------------------IYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT  228 (327)
T ss_dssp             ------------------BTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             ------------------CCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHh
Confidence                              123567888888887764432  234579999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       317 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      |..||.+.+..+....+.......+..                                             ....++..
T Consensus       229 g~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~~~~  263 (327)
T 3lm5_A          229 HTSPFVGEDNQETYLNISQVNVDYSEE---------------------------------------------TFSSVSQL  263 (327)
T ss_dssp             SSCSSCCSSHHHHHHHHHHTCCCCCTT---------------------------------------------TTTTSCHH
T ss_pred             CCCCCCCCCchHHHHHHHhcccccCch---------------------------------------------hhcccCHH
Confidence            999999888777666655543322211                                             11245667


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCCccCC
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYRR  431 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~~~  431 (432)
                      +.+||.+||+.||++|||++|+|+||||++..++.
T Consensus       264 ~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~  298 (327)
T 3lm5_A          264 ATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFEN  298 (327)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTTC
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhCCHhhccccccc
Confidence            89999999999999999999999999999876653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=7.9e-51  Score=393.49  Aligned_cols=302  Identities=27%  Similarity=0.455  Sum_probs=225.8

Q ss_pred             CCceeecCc---eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCC
Q 047395           83 GHYLFALGE---NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGS  156 (432)
Q Consensus        83 ~~~~~~~~~---~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~  156 (432)
                      ..+.+.+|+   .+.++|++++.||+|+||.||+|++..+++.||||++...   ......+.+|+.+++.+.|     +
T Consensus        10 ~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p   84 (371)
T 2xrw_A           10 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-----K   84 (371)
T ss_dssp             GEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCC-----T
T ss_pred             cceEeecCCcccchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCC-----C
Confidence            345666666   3568999999999999999999999999999999999742   2344567789999988876     9


Q ss_pred             ceeEeecccccCC------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEe
Q 047395          157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF  230 (432)
Q Consensus       157 ~iv~~~~~~~~~~------~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  230 (432)
                      ||+++++++...+      .+|+||||+.++|.+++..    .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus        85 niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~  160 (371)
T 2xrw_A           85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV  160 (371)
T ss_dssp             TBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             CccceEEeeccccccccccceEEEEEcCCCCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE
Confidence            9999999987654      7899999998899999863    48999999999999999999999999999999999996


Q ss_pred             ecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHH
Q 047395          231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVG  308 (432)
Q Consensus       231 ~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG  308 (432)
                      +.                           ++.+||+|||++......  ....+||+.|+|||++.+..++.++||||||
T Consensus       161 ~~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  213 (371)
T 2xrw_A          161 KS---------------------------DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG  213 (371)
T ss_dssp             CT---------------------------TSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHH
T ss_pred             cC---------------------------CCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHH
Confidence            54                           455777777776554332  2345789999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhh
Q 047395          309 CILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ  388 (432)
Q Consensus       309 vil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (432)
                      |++|+|++|..||.+.+..+.+..+....+.++..+..........+..... .+..  ..   +....... .......
T Consensus       214 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~---~~~~~~~~-~~~~~~~  286 (371)
T 2xrw_A          214 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRP-KYAG--YS---FEKLFPDV-LFPADSE  286 (371)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSC-CCCC--CC---HHHHSCGG-GSCCSSH
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCc-cccc--cc---hhhhcccc-cCccccc
Confidence            9999999999999999998888888888888887776665444333332211 0100  00   00000000 0000000


Q ss_pred             hcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       389 ~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .....+..+.+||.+||+.||++|||++|+|+||||+..
T Consensus       287 ~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          287 HNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             ccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence            112236679999999999999999999999999999754

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=5.4e-51  Score=392.91  Aligned_cols=258  Identities=26%  Similarity=0.413  Sum_probs=203.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .++|++++.||+|+||+||+|++..+++.||||++.......+.+.+|+.+++.++|     +||+++++++...+.+|+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~~~~~~~~~~~~~l   93 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRH-----PNIVRFKEVILTPTHLAI   93 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCC-----TTBCCEEEEEECSSEEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCC-----CCCCcEEEEEeeCCEEEE
Confidence            578999999999999999999999999999999998766666778899999999876     999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||++.++                  
T Consensus        94 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~------------------  153 (361)
T 3uc3_A           94 IMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSP------------------  153 (361)
T ss_dssp             EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSS------------------
T ss_pred             EEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC------------------
Confidence            99999 999999998765  699999999999999999999999999999999999975432                  


Q ss_pred             ccccCCCCCCeEEeecCCccccc--CCccccccCCCcchhHHHhCCCCCcc-chHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEH--QEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~-sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                             ...+||+|||++....  ......+||+.|+|||++.+..++.+ +|||||||++|+|++|..||.+......
T Consensus       154 -------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  226 (361)
T 3uc3_A          154 -------APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD  226 (361)
T ss_dssp             -------SCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC
T ss_pred             -------CceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH
Confidence                   2358888888876422  22344679999999999998887655 8999999999999999999986543221


Q ss_pred             HHH-HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          330 LAM-MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       330 ~~~-i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ... +......                    ...+|                        ....+++.+.+||.+||+.|
T Consensus       227 ~~~~~~~~~~~--------------------~~~~~------------------------~~~~~s~~~~~li~~~L~~d  262 (361)
T 3uc3_A          227 YRKTIQRILSV--------------------KYSIP------------------------DDIRISPECCHLISRIFVAD  262 (361)
T ss_dssp             HHHHHHHHHTT--------------------CCCCC------------------------TTSCCCHHHHHHHHHHSCSC
T ss_pred             HHHHHHHHhcC--------------------CCCCC------------------------CcCCCCHHHHHHHHHHccCC
Confidence            111 1111110                    00001                        01235677899999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~  427 (432)
                      |++|||+.|+++||||.+.
T Consensus       263 P~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          263 PATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             TTTSCCHHHHHTSHHHHTT
T ss_pred             hhHCcCHHHHHhCcchhcC
Confidence            9999999999999999654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.5e-50  Score=394.17  Aligned_cols=308  Identities=19%  Similarity=0.248  Sum_probs=212.3

Q ss_pred             cCceEEEeeeecc--cceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEG--TFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G--~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|+++++||+|  +||+||+|++..+++.||||+++...   .....+.+|+.+++.++|     +||+++++++...
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~   98 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNH-----PNIVPYRATFIAD   98 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCC-----TTBCCEEEEEEET
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCC-----CCCCcEeEEEEEC
Confidence            4689999999999  99999999999999999999997542   344667789999999877     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++|||++.  
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~--  176 (389)
T 3gni_B           99 NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL--  176 (389)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCE--
T ss_pred             CEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccce--
Confidence            9999999999 8999999988755579999999999999999999999999999999999998776666666665532  


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccc-cCCccccccCCCcchhHHHhC--CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYE-HQEHNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                      .+.+.|..... .......+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.
T Consensus       177 ----------------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  240 (389)
T 3gni_B          177 ----------------SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM  240 (389)
T ss_dssp             ----------------ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ----------------eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence                            12222221111 112233578999999999988  57899999999999999999999999887


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcC-chhhhhhhhhcccchHHHHHHHHH
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL-PRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      +.......+....  .+. ...........+..... .................. .............+++.+.+||.+
T Consensus       241 ~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~  316 (389)
T 3gni_B          241 PATQMLLEKLNGT--VPC-LLDTSTIPAEELTMSPS-RSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQ  316 (389)
T ss_dssp             CSTTHHHHC------------------------------------------------------------CCHHHHHHHHH
T ss_pred             CHHHHHHHHhcCC--CCc-ccccccccccccccccc-ccccccccccccccCccccccCCCCCCccccccCHHHHHHHHH
Confidence            6655443322211  110 00000000000000000 000000000000000000 000011112345678889999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||+.||++|||+.|+|+||||++..
T Consensus       317 ~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          317 CLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             HTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             HhhcCcccCCCHHHHhcCHHHHHHh
Confidence            9999999999999999999998644

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=4.6e-50  Score=387.25  Aligned_cols=282  Identities=28%  Similarity=0.502  Sum_probs=226.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC---
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR---  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~---  168 (432)
                      .++|++++.||+|+||.||+|++..+++.||||++...  ......+.+|+.++..++|     +||+++++++...   
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~~~~  100 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH-----ENIIGINDIIRAPTIE  100 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCC-----TTBCCCCEEECCSSTT
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCC-----CCCccceeEEecCCcc
Confidence            47999999999999999999999999999999999742  3344678899999999876     9999999988654   


Q ss_pred             --CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          169 --NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       169 --~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                        ...|+||||++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.              
T Consensus       101 ~~~~~~iv~e~~~~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~--------------  163 (364)
T 3qyz_A          101 QMKDVYIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--------------  163 (364)
T ss_dssp             TCCCEEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--------------
T ss_pred             ccceEEEEEcccCcCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECC--------------
Confidence              479999999988999999875   4999999999999999999999999999999999999654              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~  319 (432)
                                   ++.+||+|||++......      ....+||+.|+|||++.+. .++.++|||||||++|+|++|..
T Consensus       164 -------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  230 (364)
T 3qyz_A          164 -------------TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP  230 (364)
T ss_dssp             -------------TCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSC
T ss_pred             -------------CCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCC
Confidence                         455777777776543322      2335799999999987654 48999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.+..+.+..+....+.++...+.............   ..+....               .........+++.+.+
T Consensus       231 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---------------~~~~~~~~~~~~~~~~  292 (364)
T 3qyz_A          231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL---SLPHKNK---------------VPWNRLFPNADSKALD  292 (364)
T ss_dssp             SSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHH---TSCCCCC---------------CCHHHHCTTSCHHHHH
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHH---hcCCccC---------------CCHHHhCCCCCHHHHH
Confidence            999999999999999999988887665443321111000   0000000               0011123456778999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||.+||++||++|||+.|+|+||||++.+
T Consensus       293 li~~~L~~dP~~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          293 LLDKMLTFNPHKRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence            99999999999999999999999998753

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-50  Score=393.87  Aligned_cols=259  Identities=26%  Similarity=0.382  Sum_probs=213.5

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ..++|++++.||+|+||+||+|+++.+++.||||++++..    .....+.+|..++..+.|     +||+++++++.+.
T Consensus        59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~h-----p~Iv~l~~~~~~~  133 (412)
T 2vd5_A           59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR-----RWITQLHFAFQDE  133 (412)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCT-----TTBCCEEEEEECS
T ss_pred             ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCC-----CCeeeEEEEEeeC
Confidence            3578999999999999999999999999999999997532    233457789999888766     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ |++|.+++.+.+ ..+++..++.++.||+.||+|||++||+||||||+|||++.               
T Consensus       134 ~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~---------------  197 (412)
T 2vd5_A          134 NYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR---------------  197 (412)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---------------
T ss_pred             CEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecC---------------
Confidence            9999999999 999999998754 36999999999999999999999999999999999999654               


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHh-------CCCCCccchHHHHHHHHHHHHh
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVIL-------GLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~-------~~~~~~~sDiwSlGvil~ellt  316 (432)
                                  ++.+||+|||++......    ....+||+.|+|||++.       +..++.++|||||||++|||++
T Consensus       198 ------------~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyellt  265 (412)
T 2vd5_A          198 ------------CGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY  265 (412)
T ss_dssp             ------------TSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHh
Confidence                        455667777766543322    12358999999999997       3568999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHh--CCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          317 GEALFQTHENLEHLAMMERVL--GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       317 g~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      |..||.+.+..+....+....  ...|.                                              ....++
T Consensus       266 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~----------------------------------------------~~~~~s  299 (412)
T 2vd5_A          266 GQTPFYADSTAETYGKIVHYKEHLSLPL----------------------------------------------VDEGVP  299 (412)
T ss_dssp             SSCTTCCSSHHHHHHHHHTHHHHCCCC--------------------------------------------------CCC
T ss_pred             CCCCCCCCCHHHHHHHHHhcccCcCCCc----------------------------------------------cccCCC
Confidence            999999888777666554321  11110                                              012467


Q ss_pred             HHHHHHHHHccccCCCCC---CCHHHHhcCCCCCCCccCC
Q 047395          395 GYLIDLLQGLLRYDPSSR---LTAHDALKHPFFTRDYYRR  431 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R---~ta~elL~hp~f~~~~~~~  431 (432)
                      +++++||.+||+ +|.+|   ++++|+++||||++..|+.
T Consensus       300 ~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~  338 (412)
T 2vd5_A          300 EEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDG  338 (412)
T ss_dssp             HHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTT
T ss_pred             HHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHH
Confidence            779999999999 99998   4999999999999877654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.4e-50  Score=382.29  Aligned_cols=262  Identities=24%  Similarity=0.352  Sum_probs=206.8

Q ss_pred             CCCceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCce
Q 047395           82 DGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRC  158 (432)
Q Consensus        82 ~~~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i  158 (432)
                      .++++...++.+.++|++.++||+|+||+||+|++..+++.||||++...   .........|+..+..+.    .|+||
T Consensus        44 ~~~~p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~----~h~~i  119 (311)
T 3p1a_A           44 PGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVG----QHPCC  119 (311)
T ss_dssp             TTCCTTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHC----CCTTB
T ss_pred             CCCCCCCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhc----CCCcE
Confidence            34556667778889999999999999999999999999999999998642   222334445555554442    24999


Q ss_pred             eEeecccccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcccc
Q 047395          159 VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI  238 (432)
Q Consensus       159 v~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~  238 (432)
                      +++++++..++.+|+||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.      
T Consensus       120 v~l~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~------  192 (311)
T 3p1a_A          120 VRLEQAWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGP------  192 (311)
T ss_dssp             CCEEEEEEETTEEEEEEECCCCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECG------
T ss_pred             EEEEEEEEeCCEEEEEEeccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC------
Confidence            99999999999999999999999999998765 46999999999999999999999999999999999999654      


Q ss_pred             CCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh
Q 047395          239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       239 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt  316 (432)
                                           ++.+||+|||++......  .....||+.|+|||++.+ .++.++|||||||++|||++
T Consensus       193 ---------------------~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~  250 (311)
T 3p1a_A          193 ---------------------RGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVAC  250 (311)
T ss_dssp             ---------------------GGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHH
T ss_pred             ---------------------CCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHh
Confidence                                 456777777776554332  233568999999999887 78999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       317 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      |..||.+.....   .+..  +..+.                                             .....+++.
T Consensus       251 g~~~~~~~~~~~---~~~~--~~~~~---------------------------------------------~~~~~~~~~  280 (311)
T 3p1a_A          251 NMELPHGGEGWQ---QLRQ--GYLPP---------------------------------------------EFTAGLSSE  280 (311)
T ss_dssp             TCCCCSSHHHHH---HHTT--TCCCH---------------------------------------------HHHTTSCHH
T ss_pred             CCCCCCCccHHH---HHhc--cCCCc---------------------------------------------ccccCCCHH
Confidence            977765432211   1100  11111                                             112356777


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      +.+||.+||+.||++|||++|+|+||||++
T Consensus       281 l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          281 LRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            999999999999999999999999999986

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=7.7e-51  Score=386.06  Aligned_cols=256  Identities=24%  Similarity=0.384  Sum_probs=206.6

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +.++|++++.||+|+||+||+|++..+++.||||++....  ...+.+.+|+.+++.+.|     +||+++++++..++.
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----pnIv~~~~~~~~~~~   79 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-----ENVVKFYGHRREGNI   79 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCC-----TTBCCEEEEEECSSE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCC-----CCCCeEEEEEecCCe
Confidence            4578999999999999999999999999999999986432  334678899999999876     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.                 
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~-----------------  140 (323)
T 3tki_A           80 QYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE-----------------  140 (323)
T ss_dssp             EEEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-----------------
T ss_pred             EEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeC-----------------
Confidence            99999999 889999987653  6999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                ++.+||+|||++.....     .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||..
T Consensus       141 ----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  210 (323)
T 3tki_A          141 ----------RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ  210 (323)
T ss_dssp             ----------TCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred             ----------CCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCC
Confidence                      45677777777654321     1234679999999999988775 7789999999999999999999986


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+...............                                              ......+++.+.+||.+
T Consensus       211 ~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~  244 (323)
T 3tki_A          211 PSDSCQEYSDWKEKKTY----------------------------------------------LNPWKKIDSAPLALLHK  244 (323)
T ss_dssp             SCTTSHHHHHHHTTCTT----------------------------------------------STTGGGSCHHHHHHHHH
T ss_pred             CchHHHHHHHHhccccc----------------------------------------------CCccccCCHHHHHHHHH
Confidence            55432111110000000                                              00113456778999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||+.||++|||+.|+++||||++..
T Consensus       245 ~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          245 ILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             HSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             HccCChhhCcCHHHHhhChhhcccc
Confidence            9999999999999999999998754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=6.5e-51  Score=389.21  Aligned_cols=258  Identities=25%  Similarity=0.435  Sum_probs=210.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+.++|++.+.||+|+||+||+|++..+++.||||+++...   ....+|++++..+..    ||||+++++++.+.+.+
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~E~~~l~~~~~----hp~iv~~~~~~~~~~~~   91 (342)
T 2qr7_A           19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTEEIEILLRYGQ----HPNIITLKDVYDDGKYV   91 (342)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT---CCCHHHHHHHHHHTT----STTBCCEEEEEECSSEE
T ss_pred             CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc---CChHHHHHHHHHhcC----CCCcCeEEEEEEcCCEE
Confidence            46788999999999999999999999999999999997543   234578888887732    39999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+...+                
T Consensus        92 ~lv~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~----------------  153 (342)
T 2qr7_A           92 YVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES----------------  153 (342)
T ss_dssp             EEEECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS----------------
T ss_pred             EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCC----------------
Confidence            9999999 899999998764  699999999999999999999999999999999999974321                


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC--
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE--  325 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~--  325 (432)
                             .....+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+..  
T Consensus       154 -------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  226 (342)
T 2qr7_A          154 -------GNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD  226 (342)
T ss_dssp             -------CSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS
T ss_pred             -------CCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC
Confidence                   12345899999988764332   234678999999999998888999999999999999999999998642  


Q ss_pred             -cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          326 -NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       326 -~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                       ..+....+......++                                             ...+..+++.+.+||.+|
T Consensus       227 ~~~~~~~~i~~~~~~~~---------------------------------------------~~~~~~~s~~~~~li~~~  261 (342)
T 2qr7_A          227 TPEEILARIGSGKFSLS---------------------------------------------GGYWNSVSDTAKDLVSKM  261 (342)
T ss_dssp             CHHHHHHHHHHCCCCCC---------------------------------------------STTTTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHccCCcccC---------------------------------------------ccccccCCHHHHHHHHHH
Confidence             2233333322111111                                             011234677799999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 047395          405 LRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      |+.||++|||+.|+++||||.+
T Consensus       262 L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          262 LHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             TCSSTTTSCCHHHHTTSHHHHT
T ss_pred             CCCChhHCcCHHHHhcCCeecC
Confidence            9999999999999999999965

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=6e-50  Score=372.92  Aligned_cols=261  Identities=25%  Similarity=0.422  Sum_probs=220.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++....   .....+.+|+.++..++|     +||+++++++...
T Consensus         3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~   77 (284)
T 3kk8_A            3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-----PNIVRLHDSIQEE   77 (284)
T ss_dssp             TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCC-----TTBCCEEEEEECS
T ss_pred             hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCC-----CCcCeEEEEEEcC
Confidence            46789999999999999999999999999999999996533   334567789999999876     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++             
T Consensus        78 ~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-------------  142 (284)
T 3kk8_A           78 SFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA-------------  142 (284)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS-------------
T ss_pred             CEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCC-------------
Confidence            9999999999 889999998765  699999999999999999999999999999999999986532             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                 ....+||+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus       143 -----------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  211 (284)
T 3kk8_A          143 -----------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED  211 (284)
T ss_dssp             -----------TTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -----------CCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc
Confidence                       34558999999886654332  34578999999999999999999999999999999999999998877


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .......+.......|..                                             ....+++.+.+||.+||
T Consensus       212 ~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~li~~~l  246 (284)
T 3kk8_A          212 QHRLYAQIKAGAYDYPSP---------------------------------------------EWDTVTPEAKSLIDSML  246 (284)
T ss_dssp             HHHHHHHHHHTCCCCCTT---------------------------------------------TTTTSCHHHHHHHHHHS
T ss_pred             hhHHHHHHHhccccCCch---------------------------------------------hhcccCHHHHHHHHHHc
Confidence            766666554433222210                                             11245667899999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCc
Q 047395          406 RYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +.||++|||+.|+|+||||++..
T Consensus       247 ~~dp~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          247 TVNPKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             CSSTTTSCCHHHHTTSHHHHSCC
T ss_pred             ccChhhCCCHHHHhcCccccCCh
Confidence            99999999999999999997643

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=6.1e-50  Score=377.90  Aligned_cols=282  Identities=32%  Similarity=0.550  Sum_probs=221.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .++|++++.||+|+||+||+|++..+++.||||++...   ......+.+|+.++..++|     +||+++++++...+.
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~   76 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH-----PNLVNLLEVFRRKRR   76 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCC-----TTBCCEEEEEEETTE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCC-----CCccchhheeecCCe
Confidence            46899999999999999999999999999999998543   2334567789999999876     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.                 
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~-----------------  137 (311)
T 4agu_A           77 LHLVFEYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITK-----------------  137 (311)
T ss_dssp             EEEEEECCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-----------------
T ss_pred             EEEEEEeCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcC-----------------
Confidence            99999999 777888776553  6999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                ++.++|+|||.+......   ....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+
T Consensus       138 ----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  207 (311)
T 4agu_A          138 ----------HSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS  207 (311)
T ss_dssp             ----------TSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ----------CCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence                      456777777777654322   234578999999999987 568999999999999999999999999999


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....+....+..+...........  +........+.....                .....+.++..+.+||.+||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~li~~~L  269 (311)
T 4agu_A          208 DVDQLYLIRKTLGDLIPRHQQVFSTNQ--YFSGVKIPDPEDMEP----------------LELKFPNISYPALGLLKGCL  269 (311)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHHHHTCG--GGTTCCCCCCSSCCC----------------HHHHCTTCCHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhccccccccccccccc--ccccCcCCCccccch----------------hhhhcccccHHHHHHHHHHc
Confidence            999988888888877765544332211  111111111111000                11122457788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +.||++|||++|+|+||||++.
T Consensus       270 ~~dP~~Rpt~~ell~hp~f~~~  291 (311)
T 4agu_A          270 HMDPTERLTCEQLLHHPYFENI  291 (311)
T ss_dssp             CSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cCChhhcCCHHHHhcChHHHhc
Confidence            9999999999999999999874

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=5.4e-50  Score=380.13  Aligned_cols=264  Identities=27%  Similarity=0.478  Sum_probs=221.6

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh-------hhHhHHHHHHHHHHHHhcCCCCCceeEee
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLKRYDRSGSRCVQIR  162 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~iv~~~  162 (432)
                      ++.+.++|++.+.||+|+||.||+|++..+++.||||+++....       ..+.+.+|+.++..+.|     +||++++
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~   81 (321)
T 2a2a_A            7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH-----HNVITLH   81 (321)
T ss_dssp             CSCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCC-----TTBCCEE
T ss_pred             chhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCC-----CCcceEE
Confidence            35567899999999999999999999999999999999974321       24568899999999876     9999999


Q ss_pred             cccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCc
Q 047395          163 NWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       163 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                      +++...+..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.      
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~------  153 (321)
T 2a2a_A           82 DVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI------  153 (321)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTS------
T ss_pred             EEEecCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCC------
Confidence            9999999999999999 899999998754  6999999999999999999999999999999999999865331      


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                       ....++|+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       154 -----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  216 (321)
T 2a2a_A          154 -----------------PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS  216 (321)
T ss_dssp             -----------------SSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCC
T ss_pred             -----------------CcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCC
Confidence                             1226888888888664432  234579999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.+..+....+.......+...                                             ....+..+.+
T Consensus       217 pf~~~~~~~~~~~i~~~~~~~~~~~---------------------------------------------~~~~~~~~~~  251 (321)
T 2a2a_A          217 PFLGDTKQETLANITSVSYDFDEEF---------------------------------------------FSHTSELAKD  251 (321)
T ss_dssp             SSCCSSHHHHHHHHHTTCCCCCHHH---------------------------------------------HTTCCHHHHH
T ss_pred             CCCCCCHHHHHHHHHhcccccChhh---------------------------------------------hcccCHHHHH
Confidence            9998877766665544333332211                                             1245667899


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||.+||+.||++|||+.|+|+||||+...
T Consensus       252 li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          252 FIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             HHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             HHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence            99999999999999999999999998643

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=4.7e-50  Score=403.47  Aligned_cols=267  Identities=25%  Similarity=0.446  Sum_probs=223.3

Q ss_pred             CceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--------------hhhHhHHHHHHHHHHHH
Q 047395           84 HYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--------------KYREAAMTEIDVLELLK  149 (432)
Q Consensus        84 ~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--------------~~~~~~~~E~~~l~~l~  149 (432)
                      .+....+..+.++|+++++||+|+||+||+|++..+++.||||+++...              ...+.+.+|+.+++.+.
T Consensus        25 ~~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  104 (504)
T 3q5i_A           25 MYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD  104 (504)
T ss_dssp             GGCCEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCC
T ss_pred             heeeccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC
Confidence            3455566678899999999999999999999999999999999997532              23456888999999887


Q ss_pred             hcCCCCCceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcE
Q 047395          150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI  228 (432)
Q Consensus       150 ~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  228 (432)
                      |     |||+++++++.....+|+||||| +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+||
T Consensus       105 h-----pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Ni  177 (504)
T 3q5i_A          105 H-----PNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENI  177 (504)
T ss_dssp             C-----TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             C-----CCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHE
Confidence            6     99999999999999999999999 899999998765  699999999999999999999999999999999999


Q ss_pred             EeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHH
Q 047395          229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWS  306 (432)
Q Consensus       229 li~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwS  306 (432)
                      |++.++                        ....+||+|||++......  ....+||+.|+|||++.+ .++.++||||
T Consensus       178 l~~~~~------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Diws  232 (504)
T 3q5i_A          178 LLENKN------------------------SLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWS  232 (504)
T ss_dssp             EESSTT------------------------CCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHH
T ss_pred             EEecCC------------------------CCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHH
Confidence            986532                        2346899999988765433  344679999999999875 6899999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhh
Q 047395          307 VGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV  386 (432)
Q Consensus       307 lGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (432)
                      |||++|+|++|..||.+.+..+.+..+.......+...                                          
T Consensus       233 lG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~------------------------------------------  270 (504)
T 3q5i_A          233 CGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFND------------------------------------------  270 (504)
T ss_dssp             HHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHH------------------------------------------
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccc------------------------------------------
Confidence            99999999999999999888777766655433332211                                          


Q ss_pred             hhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       387 ~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                         +..+++.+.+||.+||+.||.+|||+.|+|+||||++.
T Consensus       271 ---~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  308 (504)
T 3q5i_A          271 ---WKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY  308 (504)
T ss_dssp             ---HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred             ---cCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence               23466779999999999999999999999999999653

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=3.1e-50  Score=382.67  Aligned_cols=253  Identities=25%  Similarity=0.425  Sum_probs=205.8

Q ss_pred             cCceEEEeeeecccceEEEEEEec---CCCcEEEEEEeechh-----hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR---ETGETVAIKVVRSIK-----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      .++|++.+.||+|+||.||+|++.   .+++.||+|+++...     .....+.+|+.+++.++|     +||+++++++
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~   90 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKH-----PFIVDLIYAF   90 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCC-----TTBCCEEEEE
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCC-----CCccceeEEE
Confidence            578999999999999999999985   689999999997532     234457789999998876     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ...+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.            
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~------------  156 (327)
T 3a62_A           91 QTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNH------------  156 (327)
T ss_dssp             ECSSCEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECT------------
T ss_pred             EcCCEEEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECC------------
Confidence            9999999999999 899999998765  6999999999999999999999999999999999999654            


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                     ++.+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       157 ---------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf  221 (327)
T 3a62_A          157 ---------------QGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF  221 (327)
T ss_dssp             ---------------TSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ---------------CCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCC
Confidence                           44566777776654221   223457999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+..+....+......+|                                                 ..++..+.+||
T Consensus       222 ~~~~~~~~~~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li  252 (327)
T 3a62_A          222 TGENRKKTIDKILKCKLNLP-------------------------------------------------PYLTQEARDLL  252 (327)
T ss_dssp             CCSSHHHHHHHHHHTCCCCC-------------------------------------------------TTSCHHHHHHH
T ss_pred             CCCCHHHHHHHHHhCCCCCC-------------------------------------------------CCCCHHHHHHH
Confidence            98777666655544322211                                                 23456689999


Q ss_pred             HHccccCCCCCC-----CHHHHhcCCCCCCCcc
Q 047395          402 QGLLRYDPSSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       402 ~~~L~~dP~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      .+||+.||++||     ++.|+++||||+...+
T Consensus       253 ~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~  285 (327)
T 3a62_A          253 KKLLKRNAASRLGAGPGDAGEVQAHPFFRHINW  285 (327)
T ss_dssp             HHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCH
T ss_pred             HHHHhcCHhhccCCCCCCHHHHHcCCcccCCCH
Confidence            999999999999     8999999999987654

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=4.3e-50  Score=387.40  Aligned_cols=253  Identities=26%  Similarity=0.386  Sum_probs=204.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHH-HHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVL-ELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l-~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|++++.||+|+||+||+|++..+++.||||++++...    ....+..|..++ +.     ..|+||+++++++...
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~-----~~hp~Iv~l~~~~~~~  111 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKN-----VKHPFLVGLHFSFQTA  111 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCC-----CCCTTBCCEEEEEECS
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHh-----CCCCCCCCEEEEEEeC
Confidence            4689999999999999999999999999999999975432    122334444432 22     3459999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.               
T Consensus       112 ~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~---------------  174 (373)
T 2r5t_A          112 DKLYFVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS---------------  174 (373)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECC---------------
Confidence            9999999999 899999998764  6999999999999999999999999999999999999654               


Q ss_pred             CCCccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                  ++.+||+|||+++...   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.
T Consensus       175 ------------~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~  242 (373)
T 2r5t_A          175 ------------QGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR  242 (373)
T ss_dssp             ------------TSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             ------------CCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence                        4556777777665422   2234568999999999999999999999999999999999999999987


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+....+.......                                                 ...++..+.+||.+|
T Consensus       243 ~~~~~~~~i~~~~~~~-------------------------------------------------~~~~~~~~~~li~~l  273 (373)
T 2r5t_A          243 NTAEMYDNILNKPLQL-------------------------------------------------KPNITNSARHLLEGL  273 (373)
T ss_dssp             BHHHHHHHHHHSCCCC-------------------------------------------------CSSSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHhcccCC-------------------------------------------------CCCCCHHHHHHHHHH
Confidence            7766665554321111                                                 124566789999999


Q ss_pred             cccCCCCCCCH----HHHhcCCCCCCCcc
Q 047395          405 LRYDPSSRLTA----HDALKHPFFTRDYY  429 (432)
Q Consensus       405 L~~dP~~R~ta----~elL~hp~f~~~~~  429 (432)
                      |+.||.+||++    .++++||||+...|
T Consensus       274 L~~dp~~R~~~~~~~~~i~~h~~f~~~~w  302 (373)
T 2r5t_A          274 LQKDRTKRLGAKDDFMEIKSHVFFSLINW  302 (373)
T ss_dssp             TCSSGGGSTTTTTTHHHHHTSGGGTTCCH
T ss_pred             cccCHHhCCCCCCCHHHHhCCccccCCCH
Confidence            99999999986    69999999998655

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=3.6e-50  Score=388.69  Aligned_cols=254  Identities=24%  Similarity=0.428  Sum_probs=209.6

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ..++|++++.||+|+||.||+|++..+++.||+|++....    .....+.+|+.+++.+.|     |||+++++++...
T Consensus        13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-----p~Iv~l~~~~~~~   87 (384)
T 4fr4_A           13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH-----PFLVNLWYSFQDE   87 (384)
T ss_dssp             CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC-----TTBCCEEEEEECS
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCC-----CCCCcEEEEEEeC
Confidence            3578999999999999999999999999999999997533    233567789999988866     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.               
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~---------------  150 (384)
T 4fr4_A           88 EDMFMVVDLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDE---------------  150 (384)
T ss_dssp             SEEEEEECCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---------------
T ss_pred             CEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECC---------------
Confidence            9999999999 999999998754  6999999999999999999999999999999999999654               


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhC---CCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                  ++.+||+|||++.....  .....+||+.|+|||++.+   ..++.++|||||||++|+|++|..||.
T Consensus       151 ------------~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~  218 (384)
T 4fr4_A          151 ------------HGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH  218 (384)
T ss_dssp             ------------TSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ------------CCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCC
Confidence                        45677777777765332  2345689999999999974   458999999999999999999999997


Q ss_pred             CCCcHH---HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          323 THENLE---HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       323 ~~~~~~---~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ......   ....+......                                                 .+..++..+.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~-------------------------------------------------~p~~~s~~~~~  249 (384)
T 4fr4_A          219 IRSSTSSKEIVHTFETTVVT-------------------------------------------------YPSAWSQEMVS  249 (384)
T ss_dssp             CCTTSCHHHHHHHHHHCCCC-------------------------------------------------CCTTSCHHHHH
T ss_pred             CCCCccHHHHHHHHhhcccC-------------------------------------------------CCCcCCHHHHH
Confidence            544322   22211111111                                                 11245677899


Q ss_pred             HHHHccccCCCCCCC-HHHHhcCCCCCCCcc
Q 047395          400 LLQGLLRYDPSSRLT-AHDALKHPFFTRDYY  429 (432)
Q Consensus       400 li~~~L~~dP~~R~t-a~elL~hp~f~~~~~  429 (432)
                      ||.+||+.||.+||+ ++++++||||++..+
T Consensus       250 li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w  280 (384)
T 4fr4_A          250 LLKKLLEPNPDQRFSQLSDVQNFPYMNDINW  280 (384)
T ss_dssp             HHHHHSCSSGGGSCCSHHHHHTSGGGTTCCH
T ss_pred             HHHHHhcCCHhHhcccHHHHHcChhhhcCCH
Confidence            999999999999998 999999999998665

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.1e-50  Score=388.13  Aligned_cols=281  Identities=27%  Similarity=0.553  Sum_probs=223.4

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc-----
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD-----  166 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~-----  166 (432)
                      ...++|++.+.||+|+||+||+|++..+|+.||||++.....   ...+|+.+++.++|     +||+++++++.     
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~h-----pnIv~l~~~~~~~~~~   75 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDH-----VNIIKLVDYFYTTGDE   75 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCC-----TTBCCEEEEEEEC---
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCC-----CCccchhheeeecCcc
Confidence            346789999999999999999999999999999999865432   33479999888876     99999999883     


Q ss_pred             ---------------------------------cCCeEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHH
Q 047395          167 ---------------------------------YRNHICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVA  211 (432)
Q Consensus       167 ---------------------------------~~~~~~lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~  211 (432)
                                                       ....+++||||+.++|.+.+..  .....+++..++.++.||+.||.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~  155 (383)
T 3eb0_A           76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG  155 (383)
T ss_dssp             ----------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                                             3345899999998898888874  22347999999999999999999


Q ss_pred             HHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCccccc--CCccccccCCCcch
Q 047395          212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH--QEHNYIVSTRHYRA  289 (432)
Q Consensus       212 ~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~a  289 (432)
                      |||++||+||||||+|||++.                          .++.+||+|||++....  .......||+.|+|
T Consensus       156 ~LH~~gi~H~Dikp~Nil~~~--------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~a  209 (383)
T 3eb0_A          156 FIHSLGICHRDIKPQNLLVNS--------------------------KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRA  209 (383)
T ss_dssp             HHHTTTEECSCCCGGGEEEET--------------------------TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCC
T ss_pred             HHHHCcCccCccCHHHEEEcC--------------------------CCCcEEEEECCCCcccCCCCCCcCcccCCCccC
Confidence            999999999999999999752                          34567888888876532  23344678999999


Q ss_pred             hHHHhCCC-CCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCC
Q 047395          290 PEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGAT  368 (432)
Q Consensus       290 PE~~~~~~-~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (432)
                      ||++.+.. ++.++|||||||++|+|++|..||.+.+..+.+..+....+.++...+.........      ..+|....
T Consensus       210 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~------~~~~~~~~  283 (383)
T 3eb0_A          210 PELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTE------VRFPTLKA  283 (383)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--------CCCCCCCC
T ss_pred             HHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCccccc------ccCCccCc
Confidence            99998754 899999999999999999999999999999999999999998887766554332111      11111100


Q ss_pred             CHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          369 SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                                    ..+........++.+.+||.+||+.||++|||+.|+|+||||++
T Consensus       284 --------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          284 --------------KDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             --------------CCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             --------------ccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence                          01112233457788999999999999999999999999999964

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=2.8e-50  Score=382.57  Aligned_cols=258  Identities=29%  Similarity=0.512  Sum_probs=192.1

Q ss_pred             ecCceEEE---eeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           93 LTSRYKIL---RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        93 ~~~~y~i~---~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      +.++|++.   +.||+|+||+||+|++..+++.||||++...  ......+|+.+++.+..    |+||+++++++.+..
T Consensus         6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~----h~niv~~~~~~~~~~   79 (325)
T 3kn6_A            6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEG----HPNIVKLHEVFHDQL   79 (325)
T ss_dssp             HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTT----CTTBCCEEEEEECSS
T ss_pred             chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcC----CCCeeEEEEEEEcCC
Confidence            34678876   7899999999999999999999999999653  34567789999988862    499999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++              
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~--------------  143 (325)
T 3kn6_A           80 HTFLVMELLNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN--------------  143 (325)
T ss_dssp             EEEEEECCCCSCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----------------
T ss_pred             EEEEEEEccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCC--------------
Confidence            999999999 889999998864  699999999999999999999999999999999999986532              


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                ....+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus       144 ----------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  213 (325)
T 3kn6_A          144 ----------DNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD  213 (325)
T ss_dssp             ------------CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred             ----------CcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCc
Confidence                      2346888899888754332   234578999999999999999999999999999999999999998644


Q ss_pred             cH-------HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          326 NL-------EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       326 ~~-------~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      ..       +....+......++                                             ......+++++.
T Consensus       214 ~~~~~~~~~~~~~~i~~~~~~~~---------------------------------------------~~~~~~~s~~~~  248 (325)
T 3kn6_A          214 RSLTCTSAVEIMKKIKKGDFSFE---------------------------------------------GEAWKNVSQEAK  248 (325)
T ss_dssp             ----CCCHHHHHHHHTTTCCCCC---------------------------------------------SHHHHTSCHHHH
T ss_pred             cccccccHHHHHHHHHcCCCCCC---------------------------------------------cccccCCCHHHH
Confidence            31       11111111100000                                             011234677899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +||.+||+.||++|||+.|+++||||++.
T Consensus       249 ~li~~~L~~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          249 DLIQGLLTVDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             HHHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred             HHHHHHCCCChhHCCCHHHHhcChhhccC
Confidence            99999999999999999999999999864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=4.2e-50  Score=385.64  Aligned_cols=287  Identities=29%  Similarity=0.523  Sum_probs=223.0

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc---
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY---  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~---  167 (432)
                      .++|++++.||+|+||+||+|++..+++.||||++....   .....+.+|+.+++.++|     +||+++++++..   
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~   90 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH-----ENVVNLIEICRTKAS   90 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCC-----TTBCCEEEEEEEC--
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccC-----CCcccHhheeecccc
Confidence            478999999999999999999999999999999985432   223467789999999876     999999998875   


Q ss_pred             -----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          168 -----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       168 -----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                           .+.+|+||||++++|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+         
T Consensus        91 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~---------  160 (351)
T 3mi9_A           91 PYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD---------  160 (351)
T ss_dssp             ------CEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---------
T ss_pred             ccccCCceEEEEEeccCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC---------
Confidence                 45789999999889999887654 469999999999999999999999999999999999996544         


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCccccc-------CCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHH
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH-------QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~el  314 (432)
                                        +.+||+|||++....       ......+||+.|+|||++.+. .++.++|||||||++|+|
T Consensus       161 ------------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el  222 (351)
T 3mi9_A          161 ------------------GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM  222 (351)
T ss_dssp             ------------------SCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHH
T ss_pred             ------------------CCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHH
Confidence                              456666666665432       112335789999999999874 589999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          315 CSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       315 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      ++|..||.+.+..+....+....+.++...+........  ..  ..........  ...         ...  .....+
T Consensus       223 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~--~~~---------~~~--~~~~~~  285 (351)
T 3mi9_A          223 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYEL--YE--KLELVKGQKR--KVK---------DRL--KAYVRD  285 (351)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGG--GT--SSCCCSSCCC--CHH---------HHH--HHHHCC
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchh--hc--cccccccccc--CHH---------HHh--hhccCC
Confidence            999999999999999999999988887665443322111  00  0000000000  000         000  001235


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCccC
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYR  430 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~~  430 (432)
                      +.+.+||.+||+.||++|||++|+|+||||+.....
T Consensus       286 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  321 (351)
T 3mi9_A          286 PYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMP  321 (351)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred             hHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence            668999999999999999999999999999887653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.1e-49  Score=391.36  Aligned_cols=280  Identities=28%  Similarity=0.496  Sum_probs=222.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc------
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY------  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~------  167 (432)
                      ..+|++.+.||+|+||.||+|++..+++.||||++....   ....+|+++++.++|     +||+++++++..      
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~h-----pniv~l~~~~~~~~~~~~  124 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDH-----CNIVRLRYFFYSSGEKKD  124 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCC-----TTBCCEEEEEEEEETTTT
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCC-----CCccceeeEEeccCCCCc
Confidence            457999999999999999999999999999999986533   234579999988876     999999988742      


Q ss_pred             CCeEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          168 RNHICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       168 ~~~~~lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      ...+++||||+.++|.+++..  .....+++..++.++.||+.||.|||++||+||||||+|||++.+            
T Consensus       125 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~------------  192 (420)
T 1j1b_A          125 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD------------  192 (420)
T ss_dssp             EEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETT------------
T ss_pred             ceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCC------------
Confidence            235789999998888887764  223469999999999999999999999999999999999998642            


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                    ...+||+|||+++....  .....+||+.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus       193 --------------~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~  258 (420)
T 1j1b_A          193 --------------TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP  258 (420)
T ss_dssp             --------------TTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             --------------CCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence                          23567888887765322  23446789999999999875 68999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.+..+.+..+.+.++.++...+.........+      .+|....              ..+........++++.+||.
T Consensus       259 ~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~------~~p~~~~--------------~~~~~~~~~~~~~~~~~Li~  318 (420)
T 1j1b_A          259 GDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF------KFPQIKA--------------HPWTKVFRPRTPPEAIALCS  318 (420)
T ss_dssp             CSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCC------CCCCCCC--------------CCHHHHSCTTSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhh------ccCccCC--------------CCHHHhcCCCCCHHHHHHHH
Confidence            999999999999999988877665543221111      1111100              00111122356778999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +||+.||.+|||+.|+|+||||++.
T Consensus       319 ~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          319 RLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             HhccCChhHCCCHHHHhCCHhhccc
Confidence            9999999999999999999999753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1e-49  Score=371.74  Aligned_cols=259  Identities=28%  Similarity=0.435  Sum_probs=210.3

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++....  ...+.+.+|+++++.++|     +||+++++++...+
T Consensus        19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~~~~   93 (285)
T 3is5_A           19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDH-----PNIIKIFEVFEDYH   93 (285)
T ss_dssp             CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCC-----TTBCCEEEEEECSS
T ss_pred             ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCC-----chHHhHHHheecCC
Confidence            46789999999999999999999999999999999987543  234678889999998876     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          170 HICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ..|+||||+ +++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.              
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~--------------  159 (285)
T 3is5_A           94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQD--------------  159 (285)
T ss_dssp             EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESS--------------
T ss_pred             eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEec--------------
Confidence            999999999 88999998643  1246999999999999999999999999999999999999854              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                .+..+.+||+|||++......  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.
T Consensus       160 ----------~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~  228 (285)
T 3is5_A          160 ----------TSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGT  228 (285)
T ss_dssp             ----------SSTTCCEEECCCCCCCC----------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ----------CCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCC
Confidence                      234567899999988654332  344578999999999864 6899999999999999999999999887


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+....+.......+.                                              ....+++.+.+||.+|
T Consensus       229 ~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~li~~~  262 (285)
T 3is5_A          229 SLEEVQQKATYKEPNYAV----------------------------------------------ECRPLTPQAVDLLKQM  262 (285)
T ss_dssp             SHHHHHHHHHHCCCCCCC------------------------------------------------CCCCHHHHHHHHHH
T ss_pred             CHHHHHhhhccCCccccc----------------------------------------------ccCcCCHHHHHHHHHH
Confidence            655544333221111100                                              0123466788999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 047395          405 LRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      |+.||++|||+.|+|+||||++
T Consensus       263 L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          263 LTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             TCSCTTTSCCHHHHHTSGGGGC
T ss_pred             ccCChhhCcCHHHHhcCHHhhc
Confidence            9999999999999999999986

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=5.4e-50  Score=402.03  Aligned_cols=263  Identities=29%  Similarity=0.500  Sum_probs=218.5

Q ss_pred             eecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           87 FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        87 ~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      ......+.++|++++.||+|+||+||+|++..+++.||||+++...   .....+.+|+.+++.+.|     |||+++++
T Consensus        29 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~~~~  103 (494)
T 3lij_A           29 TSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH-----PNIMKLYD  103 (494)
T ss_dssp             CCCBCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCC-----TTBCCEEE
T ss_pred             ecCCCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCC-----CCCCeEEE
Confidence            3334556789999999999999999999999999999999997532   334667889999988876     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ++...+.+|+||||| +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++..         
T Consensus       104 ~~~~~~~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~---------  172 (494)
T 3lij_A          104 FFEDKRNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK---------  172 (494)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS---------
T ss_pred             EEEeCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCC---------
Confidence            999999999999999 899999998764  69999999999999999999999999999999999998652         


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                     .....+||+|||++......  ....+||+.|+|||++.+ .++.++|||||||++|+|++|..|
T Consensus       173 ---------------~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~p  236 (494)
T 3lij_A          173 ---------------EKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPP  236 (494)
T ss_dssp             ---------------STTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ---------------CCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCC
Confidence                           23456899999988765432  344679999999999864 689999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+..+.+..+......++..                                             ....+++.+.+|
T Consensus       237 f~~~~~~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~l  271 (494)
T 3lij_A          237 FGGQTDQEILRKVEKGKYTFDSP---------------------------------------------EWKNVSEGAKDL  271 (494)
T ss_dssp             SCCSSHHHHHHHHHHTCCCCCSG---------------------------------------------GGTTSCHHHHHH
T ss_pred             CCCCCHHHHHHHHHhCCCCCCch---------------------------------------------hcccCCHHHHHH
Confidence            99988877776665543332211                                             123456778999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      |.+||+.||.+|||+.|+|+||||++
T Consensus       272 i~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          272 IKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             HHHHCCCChhhCccHHHHhcCccccc
Confidence            99999999999999999999999965

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.4e-50  Score=379.94  Aligned_cols=251  Identities=25%  Similarity=0.400  Sum_probs=200.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh---------------------------hhHhHHHHHHHHH
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---------------------------YREAAMTEIDVLE  146 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~E~~~l~  146 (432)
                      .++|++.+.||+|+||.||+|++..+++.||||++.....                           ..+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999864321                           1245788999999


Q ss_pred             HHHhcCCCCCceeEeeccccc--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccC
Q 047395          147 LLKRYDRSGSRCVQIRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDL  223 (432)
Q Consensus       147 ~l~~~~~~~~~iv~~~~~~~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  223 (432)
                      .++|     +||+++++++..  .+.+|+||||+ +++|.+++..   ..+++..++.++.||+.||.|||++||+||||
T Consensus        92 ~l~h-----~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl  163 (298)
T 2zv2_A           92 KLDH-----PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDI  163 (298)
T ss_dssp             TCCC-----TTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             hCCC-----CCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            8876     999999999876  57899999999 8898876543   36999999999999999999999999999999


Q ss_pred             CCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCC---
Q 047395          224 KPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLG---  297 (432)
Q Consensus       224 kp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~---  297 (432)
                      ||+|||++.                           ++.+||+|||++......   .....||+.|+|||++.+..   
T Consensus       164 kp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  216 (298)
T 2zv2_A          164 KPSNLLVGE---------------------------DGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIF  216 (298)
T ss_dssp             CGGGEEECT---------------------------TSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCE
T ss_pred             CHHHEEECC---------------------------CCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCC
Confidence            999999654                           456777777776654322   23457899999999998765   


Q ss_pred             CCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhh
Q 047395          298 WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL  377 (432)
Q Consensus       298 ~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (432)
                      ++.++|||||||++|+|++|..||...........+.......|                                    
T Consensus       217 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------------------------------------  260 (298)
T 2zv2_A          217 SGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP------------------------------------  260 (298)
T ss_dssp             ESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC------------------------------------
T ss_pred             CCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCC------------------------------------
Confidence            37789999999999999999999987665544433322111111                                    


Q ss_pred             cCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          378 KLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                                 ....+++.+.+||.+||+.||++|||+.|+|+||||++
T Consensus       261 -----------~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          261 -----------DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             -----------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             -----------CccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence                       01245667899999999999999999999999999964

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=3.9e-50  Score=398.63  Aligned_cols=255  Identities=28%  Similarity=0.428  Sum_probs=213.9

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      +....++|++.+.||+|+||.||+|++..+|+.||||+++...    .....+.+|+.+++.++|     |||+++++++
T Consensus        11 ~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~H-----pnIv~l~~~~   85 (476)
T 2y94_A           11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH-----PHIIKLYQVI   85 (476)
T ss_dssp             SCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCC-----TTBCCEEEEE
T ss_pred             CCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCC-----CCCCcEEEEE
Confidence            3445678999999999999999999999999999999997543    223567889999888876     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ...+.+|+||||+ +++|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||++.            
T Consensus        86 ~~~~~~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~------------  151 (476)
T 2y94_A           86 STPSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA------------  151 (476)
T ss_dssp             ECSSEEEEEEECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECT------------
T ss_pred             EECCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEec------------
Confidence            9999999999999 999999997654  6999999999999999999999999999999999999654            


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg~~pf  321 (432)
                                     ++.+||+|||++......  ....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||
T Consensus       152 ---------------~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf  216 (476)
T 2y94_A          152 ---------------HMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF  216 (476)
T ss_dssp             ---------------TCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ---------------CCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCC
Confidence                           455777777776654322  244689999999999998775 68999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+.......+.......|                                                 ..+++.+.+||
T Consensus       217 ~~~~~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~Li  247 (476)
T 2y94_A          217 DDDHVPTLFKKICDGIFYTP-------------------------------------------------QYLNPSVISLL  247 (476)
T ss_dssp             CCSSSHHHHHHHHTTCCCCC-------------------------------------------------TTCCHHHHHHH
T ss_pred             CCCCHHHHHHHHhcCCcCCC-------------------------------------------------ccCCHHHHHHH
Confidence            98776665554433211111                                                 23456689999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .+||+.||++|||+.|+++||||++.
T Consensus       248 ~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          248 KHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             HHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             HHHcCCCchhCcCHHHHHhCHHhhhc
Confidence            99999999999999999999999764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=2.9e-50  Score=398.97  Aligned_cols=254  Identities=25%  Similarity=0.441  Sum_probs=205.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ..++|++++.||+|+||.||+|++..+++.||||+++...    .....+.+|+.++..+.|     +||+++++++...
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~l~~~~~~~  220 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-----PFLTALKYSFQTH  220 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSC-----TTSCCEEEEEEET
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCC-----CeEeeEEEEEeeC
Confidence            3578999999999999999999999999999999997532    223445667777776665     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      +.+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||+ +||+||||||+|||++.              
T Consensus       221 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~--------------  284 (446)
T 4ejn_A          221 DRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK--------------  284 (446)
T ss_dssp             TEEEEEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECS--------------
T ss_pred             CEEEEEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECC--------------
Confidence            9999999999 899999998765  69999999999999999999998 99999999999999654              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                   ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+
T Consensus       285 -------------~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  351 (446)
T 4ejn_A          285 -------------DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  351 (446)
T ss_dssp             -------------SSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -------------CCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence                         4556777777665422   223446899999999999999999999999999999999999999988


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+.......+......+|                                                 ..+++.+.+||.+
T Consensus       352 ~~~~~~~~~i~~~~~~~p-------------------------------------------------~~~~~~~~~li~~  382 (446)
T 4ejn_A          352 QDHEKLFELILMEEIRFP-------------------------------------------------RTLGPEAKSLLSG  382 (446)
T ss_dssp             SSHHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCCC-------------------------------------------------ccCCHHHHHHHHH
Confidence            777666555433222111                                                 2356678999999


Q ss_pred             ccccCCCCCC-----CHHHHhcCCCCCCCcc
Q 047395          404 LLRYDPSSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       404 ~L~~dP~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      ||+.||.+||     |++|+++||||++..+
T Consensus       383 ~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~  413 (446)
T 4ejn_A          383 LLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW  413 (446)
T ss_dssp             HTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             HcccCHHHhCCCCCCCHHHHHhCccccCCCH
Confidence            9999999999     9999999999998654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=3.1e-50  Score=392.70  Aligned_cols=258  Identities=25%  Similarity=0.458  Sum_probs=199.7

Q ss_pred             ecCceEEE-eeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc----
Q 047395           93 LTSRYKIL-RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY----  167 (432)
Q Consensus        93 ~~~~y~i~-~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~----  167 (432)
                      +.++|.+. +.||+|+||+||+|++..+++.||||+++..    ....+|+.++..+.+    |+||+++++++..    
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~----hp~iv~l~~~~~~~~~~  130 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQ----CPHIVRIVDVYENLYAG  130 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTT----STTBCCEEEEEEEEETT
T ss_pred             ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcC----CCCcceEeEEEeecccC
Confidence            34567776 7999999999999999999999999999743    345678887755532    4999999998865    


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ...+|+||||+ |++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++..             
T Consensus       131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~-------------  197 (400)
T 1nxk_A          131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-------------  197 (400)
T ss_dssp             EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-------------
T ss_pred             CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecC-------------
Confidence            56899999999 8899999987654569999999999999999999999999999999999998651             


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                 ..++.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       198 -----------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  266 (400)
T 1nxk_A          198 -----------RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN  266 (400)
T ss_dssp             -----------STTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred             -----------CCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence                       12567888888888764432  34568899999999999989999999999999999999999999765


Q ss_pred             CcHH----HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          325 ENLE----HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       325 ~~~~----~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      ....    ....+...                       ...++.                      .....++.++.+|
T Consensus       267 ~~~~~~~~~~~~i~~~-----------------------~~~~~~----------------------~~~~~~s~~~~~l  301 (400)
T 1nxk_A          267 HGLAISPGMKTRIRMG-----------------------QYEFPN----------------------PEWSEVSEEVKML  301 (400)
T ss_dssp             TTCSSCCSHHHHHHHT-----------------------CCCCCT----------------------TTTTTSCHHHHHH
T ss_pred             ccccccHHHHHHHHcC-----------------------cccCCC----------------------cccccCCHHHHHH
Confidence            4321    11111111                       111110                      1123467779999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      |.+||+.||++|||+.|+|+||||.+.
T Consensus       302 i~~~L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          302 IRNLLKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHCCCChhHCcCHHHHhcCccccCC
Confidence            999999999999999999999999754

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.2e-50  Score=383.20  Aligned_cols=282  Identities=27%  Similarity=0.470  Sum_probs=217.2

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh------hhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK------YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ..++|++.+.||+|+||.||+|++..+|+.||||+++....      ....+.+|+.++..+.|     +||+++++++.
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~   82 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH-----PNIIGLLDAFG   82 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC-----TTBCCEEEEEC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCC-----CCCCeEEEEEe
Confidence            35789999999999999999999999999999999864221      13467789999998876     99999999999


Q ss_pred             cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          167 YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       167 ~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ..+..++||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+             
T Consensus        83 ~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-------------  148 (346)
T 1ua2_A           83 HKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN-------------  148 (346)
T ss_dssp             CTTCCEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT-------------
T ss_pred             eCCceEEEEEcCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCC-------------
Confidence            999999999999779999997654 468999999999999999999999999999999999997554             


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                    +.+||+|||++.....   .....+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.
T Consensus       149 --------------~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~  214 (346)
T 1ua2_A          149 --------------GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLP  214 (346)
T ss_dssp             --------------CCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             --------------CCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence                          4566666666554322   22345789999999999765 48899999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.+..+.+..+....+.++...+.......+.....   ..+.                  .........+++.+.+||.
T Consensus       215 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------~~~~~~~~~~~~~~~~li~  273 (346)
T 1ua2_A          215 GDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK---SFPG------------------IPLHHIFSAAGDDLLDLIQ  273 (346)
T ss_dssp             CSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC---CCCC------------------CCHHHHCTTCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHcCCCChhhhhhhccCccccccc---ccCC------------------CChHHhhccCCHHHHHHHH
Confidence            999888888888877766543322221111100000   0000                  0001123456788999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +||+.||++|||+.|+|+||||++..
T Consensus       274 ~~L~~dP~~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          274 GLFLFNPCARITATQALKMKYFSNRP  299 (346)
T ss_dssp             HHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             HHhccChhhCCCHHHHhcChhhhcCC
Confidence            99999999999999999999998753

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=2.6e-50  Score=403.62  Aligned_cols=263  Identities=31%  Similarity=0.506  Sum_probs=222.8

Q ss_pred             ecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           88 ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        88 ~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      ..+..+.++|++.+.||+|+||.||+|++..+++.||||++...    ....+.+.+|+.++..+.|     |||+++++
T Consensus        19 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~~~~   93 (484)
T 3nyv_A           19 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH-----PNIMKLYE   93 (484)
T ss_dssp             CCCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCC-----TTBCCEEE
T ss_pred             cCCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCC-----CCCCcEEE
Confidence            34456788999999999999999999999999999999998643    2345678899999988876     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ++...+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.          
T Consensus        94 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~----------  161 (484)
T 3nyv_A           94 FFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLES----------  161 (484)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESS----------
T ss_pred             EEEeCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEec----------
Confidence            999999999999999 999999998764  6999999999999999999999999999999999999854          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                    ....+.+||+|||++......  ....+||+.|+|||++.+ .++.++|||||||++|+|++|.+|
T Consensus       162 --------------~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~p  226 (484)
T 3nyv_A          162 --------------KSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP  226 (484)
T ss_dssp             --------------SSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             --------------CCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCC
Confidence                          234567899999988754433  234579999999999987 689999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+..+.+..+.......+.                                             ..+..+++.+.+|
T Consensus       227 f~~~~~~~~~~~i~~~~~~~~~---------------------------------------------~~~~~~s~~~~~l  261 (484)
T 3nyv_A          227 FNGANEYDILKKVEKGKYTFEL---------------------------------------------PQWKKVSESAKDL  261 (484)
T ss_dssp             SCCSSHHHHHHHHHHCCCCCCS---------------------------------------------GGGGGSCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCC---------------------------------------------cccccCCHHHHHH
Confidence            9998887777666543322211                                             1123466779999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      |.+||+.||.+|||+.|+|+||||+..
T Consensus       262 i~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          262 IRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             HHHHCCCChhHCcCHHHHhhChhhccc
Confidence            999999999999999999999999753

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.3e-49  Score=369.29  Aligned_cols=259  Identities=26%  Similarity=0.434  Sum_probs=219.8

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .+.++|++.+.||+|+||.||+|.+..++..||+|++... ....+.+.+|+.+++.+.|     +||+++++++...+.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~   80 (277)
T 3f3z_A            6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDH-----PNIIRLYETFEDNTD   80 (277)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCC-----TTBCCEEEEEECSSE
T ss_pred             hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCC-----CCEeeEEEEEecCCe
Confidence            4567899999999999999999999999999999998753 2345678889999988866     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+..                 
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~-----------------  141 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLT-----------------  141 (277)
T ss_dssp             EEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESS-----------------
T ss_pred             EEEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEec-----------------
Confidence            99999999 889999998765  6999999999999999999999999999999999999733                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                             .+.++.++|+|||++......  .....||+.|+|||++.+. ++.++|||||||++|+|++|..||...+..
T Consensus       142 -------~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~  213 (277)
T 3f3z_A          142 -------DSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS  213 (277)
T ss_dssp             -------SSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -------CCCCCcEEEEecccceeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH
Confidence                   134567888999988654332  3445799999999998764 899999999999999999999999988877


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+.......|...                                             ...+++.+.+||.+||+.
T Consensus       214 ~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~li~~~l~~  248 (277)
T 3f3z_A          214 EVMLKIREGTFTFPEKD---------------------------------------------WLNVSPQAESLIRRLLTK  248 (277)
T ss_dssp             HHHHHHHHCCCCCCHHH---------------------------------------------HTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHhCCCCCCchh---------------------------------------------hhcCCHHHHHHHHHHccC
Confidence            77666655444444321                                             124566789999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||++|||+.|+|+||||++.
T Consensus       249 dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          249 SPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             STTTSCCHHHHTTSHHHHHH
T ss_pred             ChhhCcCHHHHhcCHHHhcc
Confidence            99999999999999999764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=5.7e-50  Score=401.16  Aligned_cols=259  Identities=31%  Similarity=0.521  Sum_probs=219.7

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.++|++++.||+|+||+||+|++..+++.||||++....   .....+.+|+.+++.+.|     |||+++++++...
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~~~~~~~~~   93 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH-----PNIMKLFEILEDS   93 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCC-----TTBCCEEEEEECS
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCC-----CCcCeEEEEEEcC
Confidence            46789999999999999999999999999999999996432   234578899999999876     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||| +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++..              
T Consensus        94 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~--------------  157 (486)
T 3mwu_A           94 SSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK--------------  157 (486)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSS--------------
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecC--------------
Confidence            9999999999 999999998765  69999999999999999999999999999999999998542              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                +..+.+||+|||++......  ....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+
T Consensus       158 ----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~  226 (486)
T 3mwu_A          158 ----------EKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN  226 (486)
T ss_dssp             ----------STTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ----------CCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                      34567899999988754332  234679999999999987 58999999999999999999999999888


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+.+..+.......+.                                             ..+..+++.+.+||.+||
T Consensus       227 ~~~~~~~i~~~~~~~~~---------------------------------------------~~~~~~s~~~~~li~~~L  261 (486)
T 3mwu_A          227 EYDILKRVETGKYAFDL---------------------------------------------PQWRTISDDAKDLIRKML  261 (486)
T ss_dssp             HHHHHHHHHHTCCCSCS---------------------------------------------GGGGGSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCC---------------------------------------------cccCCCCHHHHHHHHHHc
Confidence            77776666543322211                                             112346777999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +.||.+|||+.|+|+||||++.
T Consensus       262 ~~dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          262 TFHPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             CSSTTTSCCHHHHHHCHHHHHT
T ss_pred             CCChhhCcCHHHHhcCHhhccC
Confidence            9999999999999999999754

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=7.1e-50  Score=386.53  Aligned_cols=259  Identities=30%  Similarity=0.454  Sum_probs=211.6

Q ss_pred             ecCceEE--EeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           93 LTSRYKI--LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        93 ~~~~y~i--~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      +.+.|.+  .+.||+|+||.||+|.+..+|+.||+|+++... ...+.+.+|+.++..++|     +||+++++++...+
T Consensus        85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-----pnIv~~~~~~~~~~  159 (373)
T 2x4f_A           85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDH-----ANLIQLYDAFESKN  159 (373)
T ss_dssp             GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEEECSS
T ss_pred             cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCC-----CCCCeEEEEEEECC
Confidence            3455666  678999999999999999999999999997532 445678899999988876     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+..                
T Consensus       160 ~~~lv~E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~----------------  222 (373)
T 2x4f_A          160 DIVLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN----------------  222 (373)
T ss_dssp             EEEEEEECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE----------------
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec----------------
Confidence            999999999 899999987653 35999999999999999999999999999999999999742                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                               +..+.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus       223 ---------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~  293 (373)
T 2x4f_A          223 ---------RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND  293 (373)
T ss_dssp             ---------TTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             ---------CCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH
Confidence                     23456888888888764432  2345799999999999988899999999999999999999999998887


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+.+..+......++.                                             .....+++.+.+||.+||+
T Consensus       294 ~~~~~~i~~~~~~~~~---------------------------------------------~~~~~~~~~~~~li~~~L~  328 (373)
T 2x4f_A          294 AETLNNILACRWDLED---------------------------------------------EEFQDISEEAKEFISKLLI  328 (373)
T ss_dssp             HHHHHHHHHTCCCSCS---------------------------------------------GGGTTSCHHHHHHHHTTSC
T ss_pred             HHHHHHHHhccCCCCh---------------------------------------------hhhccCCHHHHHHHHHHcC
Confidence            7766665543222211                                             1123456779999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 047395          407 YDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .||.+|||+.|+|+||||++.
T Consensus       329 ~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          329 KEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             SSGGGSCCHHHHHHSHHHHCH
T ss_pred             CChhhCCCHHHHhcCcCcCCC
Confidence            999999999999999999764

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.8e-49  Score=375.55  Aligned_cols=264  Identities=25%  Similarity=0.408  Sum_probs=204.3

Q ss_pred             ceecCceEEE-eeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           91 ENLTSRYKIL-RKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        91 ~~~~~~y~i~-~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ..+.++|++. +.||+|+||+||+|++..+++.||||+++... .....+.+|+.++..+.    .|+||+++++++...
T Consensus         8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~----~h~~i~~~~~~~~~~   83 (316)
T 2ac3_A            8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ----GHRNVLELIEFFEEE   83 (316)
T ss_dssp             CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTC----CCTTBCCEEEEEEET
T ss_pred             cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhc----CCCCeeeEEEEEeeC
Confidence            3456789996 78999999999999999999999999997532 33567888999888753    249999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.            
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~------------  149 (316)
T 2ac3_A           84 DRFYLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ------------  149 (316)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSS------------
T ss_pred             CEEEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCC------------
Confidence            9999999999 899999998764  6999999999999999999999999999999999999865432            


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccC----------CccccccCCCcchhHHHhC-----CCCCccchHHHHHHHHH
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQ----------EHNYIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILI  312 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~-----~~~~~~sDiwSlGvil~  312 (432)
                                  ...+||+|||++.....          .....+||+.|+|||++.+     ..++.++|||||||++|
T Consensus       150 ------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~  217 (316)
T 2ac3_A          150 ------------VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILY  217 (316)
T ss_dssp             ------------SCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHH
T ss_pred             ------------cCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHH
Confidence                        23477777777654321          1123469999999999975     45789999999999999


Q ss_pred             HHHhCCCCCCCCCcHH---------------HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhh
Q 047395          313 ELCSGEALFQTHENLE---------------HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL  377 (432)
Q Consensus       313 elltg~~pf~~~~~~~---------------~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (432)
                      +|++|..||.+....+               ....+......+|.                                   
T Consensus       218 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------------------------  262 (316)
T 2ac3_A          218 ILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD-----------------------------------  262 (316)
T ss_dssp             HHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCH-----------------------------------
T ss_pred             HHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCc-----------------------------------
Confidence            9999999998654211               11111111111110                                   


Q ss_pred             cCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          378 KLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                                .....++..+.+||.+||+.||++|||+.|+|+||||++...
T Consensus       263 ----------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~  304 (316)
T 2ac3_A          263 ----------KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP  304 (316)
T ss_dssp             ----------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred             ----------hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence                      112346777999999999999999999999999999987543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=2.5e-49  Score=375.44  Aligned_cols=254  Identities=25%  Similarity=0.429  Sum_probs=210.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      ..|...+.||+|+||.||+|++..+|+.||||+++... ...+.+.+|+.++..++|     +||+++++++...+..++
T Consensus        45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~~~~~l  119 (321)
T 2c30_A           45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH-----FNVVEMYKSYLVGEELWV  119 (321)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC-----TTBCCEEEEEEETTEEEE
T ss_pred             hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC-----CCcceEEEEEEECCEEEE
Confidence            35888899999999999999999999999999997433 334567889999888876     999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++...   .+++..+..++.||+.||.|||++||+||||||+|||++.                    
T Consensus       120 v~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--------------------  176 (321)
T 2c30_A          120 LMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL--------------------  176 (321)
T ss_dssp             EECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--------------------
T ss_pred             EEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--------------------
Confidence            99999 99999998754   5999999999999999999999999999999999999654                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                             ++.+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+.
T Consensus       177 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~  249 (321)
T 2c30_A          177 -------DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA  249 (321)
T ss_dssp             -------TCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             -------CCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                   445777777766543322   2345799999999999999999999999999999999999999987766555


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+.....+..                                              .....+++.+.+||.+||+.||
T Consensus       250 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~~l~~li~~~l~~dp  283 (321)
T 2c30_A          250 MKRLRDSPPPKL----------------------------------------------KNSHKVSPVLRDFLERMLVRDP  283 (321)
T ss_dssp             HHHHHHSSCCCC----------------------------------------------TTGGGSCHHHHHHHHHHSCSST
T ss_pred             HHHHhcCCCCCc----------------------------------------------CccccCCHHHHHHHHHHccCCh
Confidence            444332211000                                              0012356678999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCcc
Q 047395          410 SSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       410 ~~R~ta~elL~hp~f~~~~~  429 (432)
                      ++|||+.|+|+||||.+...
T Consensus       284 ~~Rps~~ell~hp~~~~~~~  303 (321)
T 2c30_A          284 QERATAQELLDHPFLLQTGL  303 (321)
T ss_dssp             TTSCCHHHHHTSGGGGGCCC
T ss_pred             hhCcCHHHHhcChhhccCCC
Confidence            99999999999999987643

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1e-49  Score=401.18  Aligned_cols=256  Identities=26%  Similarity=0.433  Sum_probs=212.2

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ..++|++.+.||+|+||.||+|++..+|+.||||++....    .....+.+|+.++..+.|     +||+++++++.+.
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~h-----p~Iv~l~~~~~~~  256 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS-----RFVVSLAYAYETK  256 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCC-----TTBCCEEEEEECS
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCC-----CCEeeEEEEEeeC
Confidence            3578999999999999999999999999999999997532    233557789999998876     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ |++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.               
T Consensus       257 ~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~---------------  321 (576)
T 2acx_A          257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDD---------------  321 (576)
T ss_dssp             SEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT---------------
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeC---------------
Confidence            9999999999 999999998765456999999999999999999999999999999999999654               


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                  ++.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|||++|..||.+..
T Consensus       322 ------------~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~  389 (576)
T 2acx_A          322 ------------HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK  389 (576)
T ss_dssp             ------------TSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred             ------------CCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence                        456677777776554322  234589999999999999899999999999999999999999998754


Q ss_pred             cH----HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          326 NL----EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       326 ~~----~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ..    .....+.....                                                 ..+..+++.+.+||
T Consensus       390 ~~~~~~~i~~~i~~~~~-------------------------------------------------~~p~~~s~~~~dLI  420 (576)
T 2acx_A          390 KKIKREEVERLVKEVPE-------------------------------------------------EYSERFSPQARSLC  420 (576)
T ss_dssp             SCCCHHHHHHHHHHCCC-------------------------------------------------CCCTTSCHHHHHHH
T ss_pred             cchhHHHHHHHhhcccc-------------------------------------------------cCCccCCHHHHHHH
Confidence            31    11111111100                                                 01134567799999


Q ss_pred             HHccccCCCCCC-----CHHHHhcCCCCCCCcc
Q 047395          402 QGLLRYDPSSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       402 ~~~L~~dP~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      .+||+.||.+||     +++|+++||||++..+
T Consensus       421 ~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w  453 (576)
T 2acx_A          421 SQLLCKDPAERLGCRGGSAREVKEHPLFKKLNF  453 (576)
T ss_dssp             HHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCH
T ss_pred             HHhccCCHHHcCCCCCCCHHHHHhChhhccCCH
Confidence            999999999999     8999999999998655

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=2.2e-49  Score=409.92  Aligned_cols=255  Identities=24%  Similarity=0.364  Sum_probs=214.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++++.||+|+||+||+|++..+++.||||++++..    ...+....|..++..+.    .|++|+.++++++..+
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~----~~~~i~~l~~~~~~~~  415 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG----KPPFLTQLHSCFQTMD  415 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTT----CCTTBCCEEEECBCSS
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhcc----CCCeEEEEEEEEEeCC
Confidence            468999999999999999999999999999999997532    23345666777766553    3599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+||||||+ |++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++.                
T Consensus       416 ~~~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~----------------  477 (674)
T 3pfq_A          416 RLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS----------------  477 (674)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECS----------------
T ss_pred             EEEEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcC----------------
Confidence            999999999 999999998865  6999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccc---cCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                 ++.+||+|||+++..   .......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+
T Consensus       478 -----------~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~  546 (674)
T 3pfq_A          478 -----------EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED  546 (674)
T ss_dssp             -----------SSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -----------CCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC
Confidence                       456677777776542   222345689999999999999999999999999999999999999999888


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....|......+|                                                 ..+++++.+||.+||
T Consensus       547 ~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~lL  577 (674)
T 3pfq_A          547 EDELFQSIMEHNVAYP-------------------------------------------------KSMSKEAVAICKGLM  577 (674)
T ss_dssp             HHHHHHHHHSSCCCCC-------------------------------------------------TTSCHHHHHHHHHHS
T ss_pred             HHHHHHHHHhCCCCCC-------------------------------------------------ccCCHHHHHHHHHHc
Confidence            7776666543222221                                                 245667899999999


Q ss_pred             ccCCCCCCCH-----HHHhcCCCCCCCccC
Q 047395          406 RYDPSSRLTA-----HDALKHPFFTRDYYR  430 (432)
Q Consensus       406 ~~dP~~R~ta-----~elL~hp~f~~~~~~  430 (432)
                      +.||++||++     +||++||||+...|+
T Consensus       578 ~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~  607 (674)
T 3pfq_A          578 TKHPGKRLGCGPEGERDIKEHAFFRYIDWE  607 (674)
T ss_dssp             CSSSTTCTTCSTTHHHHHHSSGGGSSCCHH
T ss_pred             cCCHHHCCCCCCCcHHHHhcCccccCCCHH
Confidence            9999999997     999999999986653

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=3.2e-49  Score=384.98  Aligned_cols=284  Identities=31%  Similarity=0.531  Sum_probs=222.0

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--  167 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--  167 (432)
                      ++....+|++.+.||+|+||+||+|++..+++ ||+|++.....   ...+|+.+++.++|     +||+++++++..  
T Consensus        35 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~---~~~~E~~il~~l~h-----~niv~l~~~~~~~~  105 (394)
T 4e7w_A           35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR---FKNRELQIMRIVKH-----PNVVDLKAFFYSNG  105 (394)
T ss_dssp             CCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT---SCCHHHHHHHTCCC-----TTBCCEEEEEEEES
T ss_pred             CCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc---hHHHHHHHHHhCCC-----CCcceEEEEEEecC
Confidence            45567789999999999999999999887666 88887754322   23479999988876     999999999843  


Q ss_pred             ----CCeEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCc
Q 047395          168 ----RNHICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       168 ----~~~~~lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                          ...+++||||+.++|.+.+..  .....+++..++.++.||+.||+|||++||+||||||+|||++.         
T Consensus       106 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~---------  176 (394)
T 4e7w_A          106 DKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDP---------  176 (394)
T ss_dssp             SSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET---------
T ss_pred             CCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcC---------
Confidence                334899999997777666552  12246999999999999999999999999999999999999752         


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCccccc--CCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCC
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~  318 (432)
                                       .++.+||+|||+++...  ......+||+.|+|||++.+. .++.++|||||||++|||++|.
T Consensus       177 -----------------~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~  239 (394)
T 4e7w_A          177 -----------------PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ  239 (394)
T ss_dssp             -----------------TTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             -----------------CCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                             34567778888776532  233446789999999999875 4899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||.+.+..+.+..+.+.++.++...+.........      ..++....              ..+........++++.
T Consensus       240 ~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~------~~~~~~~~--------------~~~~~~~~~~~~~~~~  299 (394)
T 4e7w_A          240 PLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYME------HKFPQIRP--------------HPFSKVFRPRTPPDAI  299 (394)
T ss_dssp             CSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSS------SCCCCCCC--------------CCHHHHSCTTCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhh------hccccccC--------------CcHHHhccccCCHHHH
Confidence            999999999999999999999888766554322111      01111100              0011122345678899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +||.+||+.||.+|||+.|+|+||||++..
T Consensus       300 ~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (394)
T 4e7w_A          300 DLISRLLEYTPSARLTAIEALCHPFFDELR  329 (394)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred             HHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence            999999999999999999999999998743

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=3.1e-49  Score=380.80  Aligned_cols=287  Identities=29%  Similarity=0.465  Sum_probs=217.0

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC----
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN----  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~----  169 (432)
                      .++|++.+.||+|+||+||+|++..+++.||||++...........+++..+..+.|     +||+++++++...+    
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h-----~niv~~~~~~~~~~~~~~   96 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH-----PNIVQLQSYFYTLGERDR   96 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCC-----TTBCCEEEEEEEECSSCT
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCC-----CCcccHHHhhhccccccc
Confidence            468999999999999999999999999999999987655555556677777777766     99999999985422    


Q ss_pred             ---eEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHH--hCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          170 ---HICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       170 ---~~~lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH--~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                         .+++||||+.++|.+.+..  .....+++..++.++.||+.||.|||  ++||+||||||+|||++.          
T Consensus        97 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~----------  166 (360)
T 3e3p_A           97 RDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE----------  166 (360)
T ss_dssp             TCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET----------
T ss_pred             cceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC----------
Confidence               3899999997788776653  22346899999999999999999999  999999999999999764          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~  319 (432)
                                      .++.+||+|||++......  .....||+.|+|||++.+.. ++.++|||||||++|+|++|..
T Consensus       167 ----------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~  230 (360)
T 3e3p_A          167 ----------------ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP  230 (360)
T ss_dssp             ----------------TTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ----------------CCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                            2446777777777654332  23457899999999997654 8999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.+....+..+.+..+.++...+................                 ...............++.+.+
T Consensus       231 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~  293 (360)
T 3e3p_A          231 IFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSK-----------------GIPWSNVFSDHSLKDAKEAYD  293 (360)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCC-----------------CCCHHHHTTTCCCTTHHHHHH
T ss_pred             CcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccc-----------------cCCcccccchhhccccHHHHH
Confidence            999999999999999999999988777654332211110000                 000111222223456788999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||.+||+.||.+|||+.|+|+||||++..
T Consensus       294 li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          294 LLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             HHHHHhccCccccCCHHHHhcCccccccC
Confidence            99999999999999999999999998754

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=3.9e-50  Score=393.28  Aligned_cols=295  Identities=25%  Similarity=0.461  Sum_probs=213.4

Q ss_pred             ceecCceEE-EeeeecccceEEEEEEec--CCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc--
Q 047395           91 ENLTSRYKI-LRKIGEGTFGQVLDCLDR--ETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF--  165 (432)
Q Consensus        91 ~~~~~~y~i-~~~lg~G~~g~V~~a~~~--~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~--  165 (432)
                      +.+.+.|++ .++||+|+||+||+|++.  .+++.||||++.... ....+.+|+.+++.++|     +||+++++++  
T Consensus        16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~h-----pniv~~~~~~~~   89 (405)
T 3rgf_A           16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKH-----PNVISLQKVFLS   89 (405)
T ss_dssp             CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCCC-----TTBCCCCEEEEE
T ss_pred             hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcCC-----CCeeeEeeEEec
Confidence            455677888 458999999999999965  568899999997532 33467889999999977     9999999998  


Q ss_pred             ccCCeEEEEEccCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcccc
Q 047395          166 DYRNHICIVFEMLGPSLYDFLRKNN-------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI  238 (432)
Q Consensus       166 ~~~~~~~lv~e~~~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~  238 (432)
                      .....+|+||||++++|.+++....       ...+++..++.++.||+.||.|||++||+||||||+|||+...     
T Consensus        90 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~-----  164 (405)
T 3rgf_A           90 HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGE-----  164 (405)
T ss_dssp             TTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCS-----
T ss_pred             CCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecC-----
Confidence            4578999999999889999987421       1249999999999999999999999999999999999998432     


Q ss_pred             CCcccccCCCCCccccccCCCCCCeEEeecCCcccccC------CccccccCCCcchhHHHhCC-CCCccchHHHHHHHH
Q 047395          239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ------EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCIL  311 (432)
Q Consensus       239 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil  311 (432)
                                        .+..+.+||+|||++.....      .....+||+.|+|||++.+. .++.++|||||||++
T Consensus       165 ------------------~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il  226 (405)
T 3rgf_A          165 ------------------GPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF  226 (405)
T ss_dssp             ------------------STTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHH
T ss_pred             ------------------CCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHH
Confidence                              13456788888888875432      22346789999999999885 489999999999999


Q ss_pred             HHHHhCCCCCCCCCc---------HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHh----hc
Q 047395          312 IELCSGEALFQTHEN---------LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV----LK  378 (432)
Q Consensus       312 ~elltg~~pf~~~~~---------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  378 (432)
                      |+|++|.+||.+...         .+.+..+...++.++...+..........               ......    ..
T Consensus       227 ~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~  291 (405)
T 3rgf_A          227 AELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHS---------------TLMKDFRRNTYT  291 (405)
T ss_dssp             HHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHH---------------HHHHHCCGGGGT
T ss_pred             HHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchh---------------hhhhhccccCCC
Confidence            999999999976554         47788888888877654433322211100               000000    00


Q ss_pred             CchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ...............++.+.+||.+||++||.+|||++|+|+||||++...
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~  342 (405)
T 3rgf_A          292 NCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL  342 (405)
T ss_dssp             TCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred             cchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCC
Confidence            011111122222344677999999999999999999999999999987654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=2.1e-49  Score=368.41  Aligned_cols=252  Identities=25%  Similarity=0.430  Sum_probs=209.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++.+.||+|+||+||+|.+..+++.||+|++....    .....+.+|+.++..+.|     +||+++++++...+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~   82 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-----PNILRLYGYFHDAT   82 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCC-----TTBCCEEEEEECSS
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCC-----CCCcchhheEecCC
Confidence            478999999999999999999999999999999986532    224567788888887766     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.                
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~----------------  144 (279)
T 3fdn_A           83 RVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS----------------  144 (279)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECT----------------
T ss_pred             EEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcC----------------
Confidence            999999999 889999998764  6999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                                 ++.++|+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus       145 -----------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  213 (279)
T 3fdn_A          145 -----------AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ  213 (279)
T ss_dssp             -----------TSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             -----------CCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH
Confidence                       445677777765443222 23457899999999999999999999999999999999999999987766


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+.......|                                                 ..+++.+.+||.+||+.
T Consensus       214 ~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~li~~~l~~  244 (279)
T 3fdn_A          214 ETYKRISRVEFTFP-------------------------------------------------DFVTEGARDLISRLLKH  244 (279)
T ss_dssp             HHHHHHHHTCCCCC-------------------------------------------------TTSCHHHHHHHHHHCCS
T ss_pred             HHHHHHHhCCCCCC-------------------------------------------------CcCCHHHHHHHHHHhcc
Confidence            66655544322222                                                 23456688999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCc
Q 047395          408 DPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||++|||+.|+|+||||+...
T Consensus       245 ~p~~Rps~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          245 NPSQRPMLREVLEHPWITANS  265 (279)
T ss_dssp             SGGGSCCHHHHHHCHHHHHHC
T ss_pred             ChhhCCCHHHHhhCccccCCc
Confidence            999999999999999997643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.2e-48  Score=377.10  Aligned_cols=258  Identities=30%  Similarity=0.524  Sum_probs=213.2

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---------hhhHhHHHHHHHHHHH-HhcCCCCCcee
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---------KYREAAMTEIDVLELL-KRYDRSGSRCV  159 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l-~~~~~~~~~iv  159 (432)
                      ...+.++|++.+.||+|+||.||+|++..+|+.||||+++...         ...+.+.+|+.++..+ .|     +||+
T Consensus        89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-----p~iv  163 (365)
T 2y7j_A           89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH-----PHII  163 (365)
T ss_dssp             HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTC-----TTBC
T ss_pred             hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEe
Confidence            3445678999999999999999999999999999999986432         2245677899999988 45     9999


Q ss_pred             EeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcccc
Q 047395          160 QIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI  238 (432)
Q Consensus       160 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~  238 (432)
                      ++++++...+..|+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.      
T Consensus       164 ~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~------  235 (365)
T 2y7j_A          164 TLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD------  235 (365)
T ss_dssp             CEEEEEEBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT------
T ss_pred             EEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC------
Confidence            9999999999999999999 889999998764  6999999999999999999999999999999999999654      


Q ss_pred             CCcccccCCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhC------CCCCccchHHHHHHH
Q 047395          239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILG------LGWSYPCDMWSVGCI  310 (432)
Q Consensus       239 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~------~~~~~~sDiwSlGvi  310 (432)
                                           ++.++|+|||++.....  .....+||+.|+|||++.+      ..++.++|||||||+
T Consensus       236 ---------------------~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~i  294 (365)
T 2y7j_A          236 ---------------------NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVI  294 (365)
T ss_dssp             ---------------------TCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHH
T ss_pred             ---------------------CCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHH
Confidence                                 45677777777665432  2334679999999999974      357889999999999


Q ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhc
Q 047395          311 LIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV  390 (432)
Q Consensus       311 l~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (432)
                      +|+|++|..||...+.......+.......+..                                             ..
T Consensus       295 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------------------------~~  329 (365)
T 2y7j_A          295 LFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSP---------------------------------------------EW  329 (365)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHH---------------------------------------------HH
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCc---------------------------------------------cc
Confidence            999999999998877666555544432222211                                             11


Q ss_pred             ccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       391 ~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ...+..+.+||.+||+.||++|||+.|+|+||||++
T Consensus       330 ~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          330 DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             SSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            345667899999999999999999999999999974

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=4.4e-49  Score=378.80  Aligned_cols=282  Identities=28%  Similarity=0.497  Sum_probs=223.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.++|.+.+.||+|+||.||+|++..+|+.||||++...   ......+.+|+.+++.++|     +||+++++++...
T Consensus        21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~   95 (353)
T 3coi_A           21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH-----ENVIGLLDVFTPA   95 (353)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCC-----TTBCCCSEEECSC
T ss_pred             ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCC-----CCcccHhheEecc
Confidence            3568999999999999999999999999999999998642   2334567889999988876     9999999998766


Q ss_pred             Ce------EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          169 NH------ICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       169 ~~------~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ..      +|+||||++++|.+++..    .+++..++.++.||+.||.|||++||+||||||+|||++.          
T Consensus        96 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~----------  161 (353)
T 3coi_A           96 SSLRNFYDFYLVMPFMQTDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE----------  161 (353)
T ss_dssp             SSGGGCCCCEEEEECCSEEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECT----------
T ss_pred             cccccceeEEEEeccccCCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECC----------
Confidence            43      599999998898887743    4999999999999999999999999999999999999654          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                       ++.+||+|||++...........||+.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus       162 -----------------~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf  224 (353)
T 3coi_A          162 -----------------DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF  224 (353)
T ss_dssp             -----------------TCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             -----------------CCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                             456777777777665555556688999999999987 57899999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+..+.+..+.+..+.++..+...................+                  ..........+++.+.+||
T Consensus       225 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~li  286 (353)
T 3coi_A          225 KGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP------------------RKDFTQLFPRASPQAADLL  286 (353)
T ss_dssp             BSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCS------------------SCCTTTTCTTSCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCC------------------CccHHHhcCCcCHHHHHHH
Confidence            9999889999999999988887766554332111100000000                  0000112235678899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .+||+.||++|||+.|+|+||||+..
T Consensus       287 ~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          287 EKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             HHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHcCCCcccCCCHHHHhcCcchhhc
Confidence            99999999999999999999999864

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=3.2e-49  Score=396.57  Aligned_cols=255  Identities=22%  Similarity=0.365  Sum_probs=210.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++.+.||+|+||+||+|++..+|+.||||++++..    .....+.+|+.++..+.|     +||+++++++...+
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~h-----p~Iv~l~~~~~~~~  258 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS-----RFIVSLAYAFETKT  258 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCC-----TTBCCEEEEEECSS
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCC-----CCEeeEEEEEeeCC
Confidence            478999999999999999999999999999999997543    223567889999998866     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          170 HICIVFEML-GPSLYDFLRKNN--YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .+|+||||+ |++|.+++....  ...+++..++.++.||+.||.|||++||+||||||+|||++.              
T Consensus       259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~--------------  324 (543)
T 3c4z_A          259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDD--------------  324 (543)
T ss_dssp             EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--------------
T ss_pred             EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeC--------------
Confidence            999999999 999999998643  246999999999999999999999999999999999999654              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                   ++.+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|||++|..||.+
T Consensus       325 -------------~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~  391 (543)
T 3c4z_A          325 -------------DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA  391 (543)
T ss_dssp             -------------TSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -------------CCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCC
Confidence                         456677777776553322   2335899999999999999999999999999999999999999987


Q ss_pred             CCc----HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          324 HEN----LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       324 ~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      .+.    .+....+......                                                 .+..+++.+.+
T Consensus       392 ~~~~~~~~~~~~~i~~~~~~-------------------------------------------------~p~~~s~~~~~  422 (543)
T 3c4z_A          392 RGEKVENKELKQRVLEQAVT-------------------------------------------------YPDKFSPASKD  422 (543)
T ss_dssp             TTCCCCHHHHHHHHHHCCCC-------------------------------------------------CCTTSCHHHHH
T ss_pred             CccchhHHHHHHHHhhcccC-------------------------------------------------CCcccCHHHHH
Confidence            532    2222222111110                                                 11345677899


Q ss_pred             HHHHccccCCCCCCC-----HHHHhcCCCCCCCcc
Q 047395          400 LLQGLLRYDPSSRLT-----AHDALKHPFFTRDYY  429 (432)
Q Consensus       400 li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~  429 (432)
                      ||.+||+.||++||+     ++++++||||+...+
T Consensus       423 li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w  457 (543)
T 3c4z_A          423 FCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISW  457 (543)
T ss_dssp             HHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCH
T ss_pred             HHHHhccCCHhHCCCCcccCHHHHHcCccccCCCH
Confidence            999999999999995     589999999998654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.9e-49  Score=373.34  Aligned_cols=261  Identities=25%  Similarity=0.433  Sum_probs=216.1

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ..+.++|++.+.||+|+||.||+|++..+|+.||+|+++... .....+.+|+.++..++|     +||+++++++...+
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~   79 (304)
T 2jam_A            5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH-----ENIVTLEDIYESTT   79 (304)
T ss_dssp             -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCC-----TTBCCEEEEEECSS
T ss_pred             cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCC-----CCeeehhhhcccCC
Confidence            356789999999999999999999999999999999997543 234567889999999876     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+..                
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~----------------  141 (304)
T 2jam_A           80 HYYLVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLT----------------  141 (304)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESS----------------
T ss_pred             EEEEEEEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEec----------------
Confidence            999999999 899999998765  6999999999999999999999999999999999999732                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                              .+..+.++|+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus       142 --------~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  213 (304)
T 2jam_A          142 --------PEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES  213 (304)
T ss_dssp             --------SSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             --------CCCCCCEEEccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH
Confidence                    134567888888877654332 23356899999999999989999999999999999999999999887766


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      .....+.......+.                                             ...+.+++.+.+||.+||+.
T Consensus       214 ~~~~~i~~~~~~~~~---------------------------------------------~~~~~~~~~~~~li~~~l~~  248 (304)
T 2jam_A          214 KLFEKIKEGYYEFES---------------------------------------------PFWDDISESAKDFICHLLEK  248 (304)
T ss_dssp             HHHHHHHHCCCCCCT---------------------------------------------TTTTTSCHHHHHHHHHHHCS
T ss_pred             HHHHHHHcCCCCCCc---------------------------------------------cccccCCHHHHHHHHHHcCC
Confidence            655555443222111                                             01134567789999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||++|||+.|+|+||||++.
T Consensus       249 dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          249 DPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             STTTSCCHHHHHTSHHHHSS
T ss_pred             ChhHCcCHHHHhcCccccCC
Confidence            99999999999999999764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.5e-48  Score=375.10  Aligned_cols=285  Identities=30%  Similarity=0.448  Sum_probs=219.3

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      +..+.++|++.+.||+|+||.||+|.+..+|+.||||+++..  ......+.+|+.+++.++|     +||+++++++..
T Consensus         6 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~   80 (353)
T 2b9h_A            6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH-----ENIITIFNIQRP   80 (353)
T ss_dssp             CCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCC-----TTBCCEEEECCC
T ss_pred             ccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcC-----CCcCCeeeeecc
Confidence            456778999999999999999999999999999999999632  3344567789999998876     999999987664


Q ss_pred             C-----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          168 R-----NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       168 ~-----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      .     ...|+||||++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.++.       
T Consensus        81 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~-------  150 (353)
T 2b9h_A           81 DSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD-------  150 (353)
T ss_dssp             SCSTTCCCEEEEECCCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC-------
T ss_pred             cccCccceEEEEEeccCccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCc-------
Confidence            3     789999999988999999874   4999999999999999999999999999999999999766554       


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccC-------------CccccccCCCcchhHHHhC-CCCCccchHHHHH
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-------------EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVG  308 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------------~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlG  308 (432)
                                          +||+|||++.....             .....+||+.|+|||++.+ ..++.++||||||
T Consensus       151 --------------------~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG  210 (353)
T 2b9h_A          151 --------------------LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCG  210 (353)
T ss_dssp             --------------------EEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHH
T ss_pred             --------------------EEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHH
Confidence                                55555554443221             1123478999999999875 6789999999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhh-cCchh-hhhh
Q 047395          309 CILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL-KLPRL-QNLV  386 (432)
Q Consensus       309 vil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~  386 (432)
                      |++|+|++|..||.+.+..+.+..+....+.++........                  .. ....... ..+.. ....
T Consensus       211 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~-~~~~~~~~~~~~~~~~~~  271 (353)
T 2b9h_A          211 CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI------------------ES-PRAREYIKSLPMYPAAPL  271 (353)
T ss_dssp             HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTC------------------CC-HHHHHHHHTSCCCCCCCH
T ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhcccccc------------------cc-chhhHHhhcccCCCCcch
Confidence            99999999999999998888888888777765421100000                  00 0000000 00000 0001


Q ss_pred             hhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       387 ~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ....+.+++.+.+||.+||+.||++|||+.|+|+||||+...
T Consensus       272 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          272 EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             HHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence            122346788899999999999999999999999999998754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=5.2e-49  Score=372.70  Aligned_cols=287  Identities=26%  Similarity=0.461  Sum_probs=219.5

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc--
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD--  166 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~--  166 (432)
                      |..+.++|++++.||+|+||.||+|.+..+++.||||++... ....+.+.+|+.+++.++|     +||+++++++.  
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~   80 (320)
T 2i6l_A            6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDH-----DNIVKVFEILGPS   80 (320)
T ss_dssp             CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEECTT
T ss_pred             cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCC-----CCeeEEEEecccc
Confidence            567789999999999999999999999999999999998643 3445678889999988876     99999998763  


Q ss_pred             ------------cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCC
Q 047395          167 ------------YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE  234 (432)
Q Consensus       167 ------------~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  234 (432)
                                  ..+..|+||||++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.  
T Consensus        81 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--  155 (320)
T 2i6l_A           81 GSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--  155 (320)
T ss_dssp             SCBCCC----CCSCSEEEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET--
T ss_pred             ccccccccccccccCceeEEeeccCCCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--
Confidence                        44789999999988999999753   5999999999999999999999999999999999999853  


Q ss_pred             ccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC------CccccccCCCcchhHHHhC-CCCCccchHHHH
Q 047395          235 YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ------EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSV  307 (432)
Q Consensus       235 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSl  307 (432)
                                              .+..+||+|||++.....      ......+|..|+|||++.+ ..++.++|||||
T Consensus       156 ------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl  211 (320)
T 2i6l_A          156 ------------------------EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAA  211 (320)
T ss_dssp             ------------------------TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHH
T ss_pred             ------------------------CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhH
Confidence                                    234567777777654322      1233467999999999876 678999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhh
Q 047395          308 GCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM  387 (432)
Q Consensus       308 Gvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (432)
                      ||++|+|++|..||.+.+..+....+....+................+....                 ...+  .....
T Consensus       212 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~--~~~~~  272 (320)
T 2i6l_A          212 GCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRND-----------------MTEP--HKPLT  272 (320)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHH-----------------TTSC--CCCHH
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCccccccc-----------------ccCC--CCChh
Confidence            9999999999999999888888887777766665544333222111111100                 0000  00011


Q ss_pred             hhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       388 ~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      .....++..+.+||.+||+.||++|||++|+|+||||+...+
T Consensus       273 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (320)
T 2i6l_A          273 QLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSF  314 (320)
T ss_dssp             HHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred             HhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccC
Confidence            223467888999999999999999999999999999987554

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=2.8e-48  Score=368.88  Aligned_cols=285  Identities=29%  Similarity=0.489  Sum_probs=223.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEec-CCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc--
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDR-ETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD--  166 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~-~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~--  166 (432)
                      ..++|++.+.||+|+||.||+|++. .+++.||||+++...   .....+.+|+.+++.+...  .|+||+++++++.  
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~h~~i~~~~~~~~~~   86 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF--EHPNVVRLFDVCTVS   86 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHT--CCTTBCCEEEEEEEE
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhcc--CCCCeEeeeeeeeec
Confidence            4578999999999999999999995 678999999986432   2234677899988888532  3499999999886  


Q ss_pred             ---cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          167 ---YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       167 ---~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                         .....++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.           
T Consensus        87 ~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~-----------  155 (326)
T 1blx_A           87 RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS-----------  155 (326)
T ss_dssp             ECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-----------
T ss_pred             ccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcC-----------
Confidence               567899999999889999999876556999999999999999999999999999999999999654           


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                      ++.+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       156 ----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  219 (326)
T 1blx_A          156 ----------------SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF  219 (326)
T ss_dssp             ----------------TCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ----------------CCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence                            445777777766543322  23457899999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+..+.+..+....+.++...+.............                      ............++..+.+||
T Consensus       220 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~li  277 (326)
T 1blx_A          220 RGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS----------------------KSAQPIEKFVTDIDELGKDLL  277 (326)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCC----------------------CCCCCGGGTCCSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcc----------------------cCcchhhhccccCCHHHHHHH
Confidence            9998888888888777765543221111000000000                      000001122346778899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .+||+.||++|||+.|+|+||||++..
T Consensus       278 ~~~L~~dP~~Rpt~~e~l~hp~~~~~~  304 (326)
T 1blx_A          278 LKCLTFNPAKRISAYSALSHPYFQDLE  304 (326)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHHcCCCcccCCCHHHHhcCccccccc
Confidence            999999999999999999999998754

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=9.3e-49  Score=377.82  Aligned_cols=287  Identities=24%  Similarity=0.454  Sum_probs=220.4

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh------------hhhHhHHHHHHHHHHHHhcCCCCCc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK------------KYREAAMTEIDVLELLKRYDRSGSR  157 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~------------~~~~~~~~E~~~l~~l~~~~~~~~~  157 (432)
                      ...+.++|++.+.||+|+||.||+|.+.. ++.||||++....            .....+.+|+.++..++|     +|
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~   90 (362)
T 3pg1_A           17 LHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH-----PN   90 (362)
T ss_dssp             HHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCC-----TT
T ss_pred             HHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCC-----cC
Confidence            34567899999999999999999999865 8999999985321            123678899999999876     99


Q ss_pred             eeEeeccc-----ccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec
Q 047395          158 CVQIRNWF-----DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       158 iv~~~~~~-----~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  232 (432)
                      |+++++++     .....+|+||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        91 iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~  169 (362)
T 3pg1_A           91 ILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD  169 (362)
T ss_dssp             BCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             ccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcC
Confidence            99999988     3445799999999889999998654 46999999999999999999999999999999999999654


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhC-CCCCccchHHHHHH
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGC  309 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGv  309 (432)
                                                 ++.+||+|||++.....  ......||+.|+|||++.+ ..++.++|||||||
T Consensus       170 ---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~  222 (362)
T 3pg1_A          170 ---------------------------NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGC  222 (362)
T ss_dssp             ---------------------------TCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHH
T ss_pred             ---------------------------CCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHH
Confidence                                       45577777777654322  2234578999999999987 67899999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcc-hhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhh
Q 047395          310 ILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPA-EKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ  388 (432)
Q Consensus       310 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (432)
                      ++|+|++|..||.+.+..+.+..+....+.++........... ..+........+.                  .....
T Consensus       223 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~  284 (362)
T 3pg1_A          223 VMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA------------------RAWTA  284 (362)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCC------------------CCHHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCCh------------------hhHHh
Confidence            9999999999999999999999999988887765443332211 1111111111111                  00112


Q ss_pred             hcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       389 ~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .....++.+.+||.+||+.||++|||+.|+|+||||++.+
T Consensus       285 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          285 VVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             HSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence            2345677899999999999999999999999999998764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=3.6e-49  Score=376.06  Aligned_cols=283  Identities=29%  Similarity=0.474  Sum_probs=221.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .++|++++.||+|+||.||+|++..+++.||||++...   ......+.+|+.+++.++|     +||+++++++...+.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~   98 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH-----ENLVNLLEVCKKKKR   98 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCC-----TTBCCEEEEEEETTE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCC-----CCEeeEEEEeecCCE
Confidence            46899999999999999999999999999999998543   2334567789999999876     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.                 
T Consensus        99 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~-----------------  159 (331)
T 4aaa_A           99 WYLVFEFVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQ-----------------  159 (331)
T ss_dssp             EEEEEECCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-----------------
T ss_pred             EEEEEecCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcC-----------------
Confidence            99999999 667776655443  6999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                ++.+||+|||++.....   ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+
T Consensus       160 ----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  229 (331)
T 4aaa_A          160 ----------SGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS  229 (331)
T ss_dssp             ----------TSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ----------CCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                      45677777777654332   22345789999999999876 68999999999999999999999999999


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....+....+..+.............    .....+.....              .......+.+++.+.+||.+||
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--------------~~~~~~~~~~~~~l~~li~~~L  291 (331)
T 4aaa_A          230 DIDQLYHIMMCLGNLIPRHQELFNKNPVF----AGVRLPEIKER--------------EPLERRYPKLSEVVIDLAKKCL  291 (331)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHHHHHCGGG----TTCCCCCCSSC--------------CCHHHHSTTSCHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHhCCCChhhhhHhhhcccc----ccccCcccccc--------------chhhhcccchhHHHHHHHHHHh
Confidence            98888888888887776544332221100    00111111100              0011223456788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCc
Q 047395          406 RYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +.||++|||+.|+|+||||+...
T Consensus       292 ~~dP~~Rpt~~ell~hp~f~~~~  314 (331)
T 4aaa_A          292 HIDPDKRPFCAELLHHDFFQMDG  314 (331)
T ss_dssp             CSSGGGSCCGGGGGGSHHHHGGG
T ss_pred             ccCcccCCCHHHHhcCchhccCC
Confidence            99999999999999999998754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=3.7e-49  Score=378.08  Aligned_cols=256  Identities=27%  Similarity=0.404  Sum_probs=210.6

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ...++|++++.||+|+||+||+|++..+++.||||++...    ......+.+|+.++..++|     +||+++++++..
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~~~~~~~~  125 (348)
T 1u5q_A           51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH-----PNTIQYRGCYLR  125 (348)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCC-----TTBCCEEEEEEE
T ss_pred             chhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEEE
Confidence            3456799999999999999999999999999999998632    2334567889999999876     999999999999


Q ss_pred             CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          168 RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       168 ~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      .+..++||||+.|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.+              
T Consensus       126 ~~~~~lv~e~~~g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--------------  190 (348)
T 1u5q_A          126 EHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP--------------  190 (348)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT--------------
T ss_pred             CCeEEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC--------------
Confidence            99999999999889999987554 469999999999999999999999999999999999997654              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHh---CCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                   +.+||+|||++..... ....+||+.|+|||++.   +..++.++|||||||++|||++|..||.+.
T Consensus       191 -------------~~~kL~DfG~a~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~  256 (348)
T 1u5q_A          191 -------------GLVKLGDFGSASIMAP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM  256 (348)
T ss_dssp             -------------TEEEECCCTTCBSSSS-BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             -------------CCEEEeeccCceecCC-CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                         4566777776654432 23457999999999996   456899999999999999999999999887


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +....+..+.....+..                                               ....+++.+.+||.+|
T Consensus       257 ~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~l~~li~~~  289 (348)
T 1u5q_A          257 NAMSALYHIAQNESPAL-----------------------------------------------QSGHWSEYFRNFVDSC  289 (348)
T ss_dssp             CHHHHHHHHHHSCCCCC-----------------------------------------------CCTTSCHHHHHHHHHH
T ss_pred             ChHHHHHHHHhcCCCCC-----------------------------------------------CCCCCCHHHHHHHHHH
Confidence            76555443322111000                                               0123466688999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCc
Q 047395          405 LRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      |+.||++|||++++|+||||.+..
T Consensus       290 l~~dP~~Rps~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          290 LQKIPQDRPTSEVLLKHRFVLRER  313 (348)
T ss_dssp             TCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             cccChhhCcCHHHHhhChhhhccC
Confidence            999999999999999999997654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2e-49  Score=379.87  Aligned_cols=262  Identities=26%  Similarity=0.403  Sum_probs=212.1

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh------hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      .+.++|++.+.||+|+||+||+|++..+++.||+|++....      ...+.+.+|+.+++.++|     +||+++++++
T Consensus        23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~~~~~~   97 (345)
T 3hko_A           23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH-----PNIARLYEVY   97 (345)
T ss_dssp             HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCC-----TTBCCEEEEE
T ss_pred             hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCC-----CCcceeehhh
Confidence            45689999999999999999999999999999999997532      334678889999999876     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC--------------------------------------CCCCCHHHHHHHHHHH
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNN--------------------------------------YRPFPVDLVREIGRQL  206 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~--------------------------------------~~~l~~~~~~~i~~qi  206 (432)
                      ...+..|+||||+ +++|.+++....                                      ...+++..++.++.||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A           98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence            9999999999999 999999985210                                      1124678889999999


Q ss_pred             HHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-------Ccc
Q 047395          207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-------EHN  279 (432)
Q Consensus       207 ~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~  279 (432)
                      +.||.|||++||+||||||+|||++.++                         ...+||+|||++.....       ...
T Consensus       178 ~~~l~~LH~~~ivH~Dlkp~NIll~~~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~  232 (345)
T 3hko_A          178 FSALHYLHNQGICHRDIKPENFLFSTNK-------------------------SFEIKLVDFGLSKEFYKLNNGEYYGMT  232 (345)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEESCSS-------------------------SCCEEECCCTTCEEGGGTTCC------
T ss_pred             HHHHHHHHHCCccccCCChhhEEEecCC-------------------------CceEEEeeccccccccccCcccccccc
Confidence            9999999999999999999999975422                         23688888888765322       123


Q ss_pred             ccccCCCcchhHHHhC--CCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhc
Q 047395          280 YIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR  357 (432)
Q Consensus       280 ~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~  357 (432)
                      ...||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+....+.......+.               
T Consensus       233 ~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------  297 (345)
T 3hko_A          233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFEN---------------  297 (345)
T ss_dssp             --CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTS---------------
T ss_pred             ccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCC---------------
Confidence            4578999999999976  57899999999999999999999999988777666555432221111               


Q ss_pred             cCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          358 RGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                                                    .....+++.+.+||.+||+.||.+|||+.|+|+||||++..
T Consensus       298 ------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          298 ------------------------------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             ------------------------------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             ------------------------------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence                                          01123567789999999999999999999999999998743

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=4.4e-48  Score=362.86  Aligned_cols=260  Identities=28%  Similarity=0.497  Sum_probs=213.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----------hhhhHhHHHHHHHHHHHH-hcCCCCCceeE
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----------KKYREAAMTEIDVLELLK-RYDRSGSRCVQ  160 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----------~~~~~~~~~E~~~l~~l~-~~~~~~~~iv~  160 (432)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||+++..          ....+.+.+|+.++..+. |     +||++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-----~~i~~   88 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH-----PNIIQ   88 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC-----TTBCC
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCC-----CCEee
Confidence            4568999999999999999999999999999999999643          123456788999999986 5     99999


Q ss_pred             eecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccC
Q 047395          161 IRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIP  239 (432)
Q Consensus       161 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~  239 (432)
                      +++++...+..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+||+++.       
T Consensus        89 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~-------  159 (298)
T 1phk_A           89 LKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD-------  159 (298)
T ss_dssp             EEEEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-------
T ss_pred             eeeeeccCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcC-------
Confidence            999999999999999999 899999998764  6999999999999999999999999999999999999654       


Q ss_pred             CcccccCCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHh------CCCCCccchHHHHHHHH
Q 047395          240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVIL------GLGWSYPCDMWSVGCIL  311 (432)
Q Consensus       240 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~------~~~~~~~sDiwSlGvil  311 (432)
                                          ++.++|+|||.+.....  ......||+.|+|||++.      ...++.++|||||||++
T Consensus       160 --------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l  219 (298)
T 1phk_A          160 --------------------DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM  219 (298)
T ss_dssp             --------------------TCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHH
T ss_pred             --------------------CCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHH
Confidence                                44577777776654332  223457899999999986      44678999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcc
Q 047395          312 IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD  391 (432)
Q Consensus       312 ~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (432)
                      |+|++|..||...+.......+.......+.                                             ....
T Consensus       220 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~  254 (298)
T 1phk_A          220 YTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS---------------------------------------------PEWD  254 (298)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT---------------------------------------------TTGG
T ss_pred             HHHHHCCCCCcCccHHHHHHHHhcCCcccCc---------------------------------------------cccc
Confidence            9999999999887766655544432221110                                             0112


Q ss_pred             cchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCccC
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYR  430 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~~  430 (432)
                      .++..+.+||.+||+.||++|||+.|+|+||||++...+
T Consensus       255 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  293 (298)
T 1phk_A          255 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVE  293 (298)
T ss_dssp             GSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC--
T ss_pred             ccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccch
Confidence            456678999999999999999999999999999986654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=5.2e-49  Score=366.95  Aligned_cols=274  Identities=20%  Similarity=0.286  Sum_probs=206.9

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeeccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~  165 (432)
                      ...+.++|++.+.||+|+||+||+|++..+++.||||+++..   ......+.+|+..+..+ .|     +||+++++++
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h-----~~iv~~~~~~   80 (289)
T 1x8b_A            6 KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH-----SHVVRYFSAW   80 (289)
T ss_dssp             CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSC-----TTBCCEEEEE
T ss_pred             cccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCC-----CCeeeeeeee
Confidence            345678999999999999999999999999999999998742   23445677788887777 44     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNY--RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ...+..++||||+ +++|.+++.....  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.....+..
T Consensus        81 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~  160 (289)
T 1x8b_A           81 AEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEE  160 (289)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------
T ss_pred             ecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccc
Confidence            9999999999999 8899999986421  368999999999999999999999999999999999999877655443322


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                      ....        ........++|+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|+|++|.+|+
T Consensus       161 ~~~~--------~~~~~~~~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~  231 (289)
T 1x8b_A          161 GDED--------DWASNKVMFKIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLP  231 (289)
T ss_dssp             -----------------CCCEEECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             cccc--------cccCCceEEEEcccccccccCCcc-ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCC
Confidence            1110        002355689999999987765433 34699999999999876 5668999999999999999999877


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ......   ..+..  +..                                              ...+..+++.+.+||
T Consensus       232 ~~~~~~---~~~~~--~~~----------------------------------------------~~~~~~~~~~~~~li  260 (289)
T 1x8b_A          232 RNGDQW---HEIRQ--GRL----------------------------------------------PRIPQVLSQEFTELL  260 (289)
T ss_dssp             SSSHHH---HHHHT--TCC----------------------------------------------CCCSSCCCHHHHHHH
T ss_pred             cchhHH---HHHHc--CCC----------------------------------------------CCCCcccCHHHHHHH
Confidence            543221   11111  000                                              001234567789999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .+||+.||++|||+.|+++||||++..
T Consensus       261 ~~~l~~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          261 KVMIHPDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             HHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred             HHHhCCCcccCCCHHHHhhChHhhhhc
Confidence            999999999999999999999998754

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.3e-48  Score=372.89  Aligned_cols=255  Identities=28%  Similarity=0.443  Sum_probs=214.1

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ...++|++.+.||+|+||.||+|++..+++.||+|++...    ....+.+.+|+.+++.+.|     +||+++++++..
T Consensus        38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~  112 (335)
T 2owb_A           38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH-----QHVVGFHGFFED  112 (335)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEEEC
T ss_pred             ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCC-----CCCCeEEEEEec
Confidence            3457899999999999999999999999999999998753    2345677889998888866     999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .+..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.              
T Consensus       113 ~~~~~lv~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~--------------  176 (335)
T 2owb_A          113 NDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--------------  176 (335)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT--------------
T ss_pred             CCeEEEEEecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcC--------------
Confidence            99999999999 899999998764  6999999999999999999999999999999999999654              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                   ++.+||+|||++....   .......||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus       177 -------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  243 (335)
T 2owb_A          177 -------------DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  243 (335)
T ss_dssp             -------------TCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             -------------CCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence                         4557777777765433   222345789999999999999999999999999999999999999988


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      ....+....+......+                                                 ...+++.+.+||.+
T Consensus       244 ~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~li~~  274 (335)
T 2owb_A          244 SCLKETYLRIKKNEYSI-------------------------------------------------PKHINPVAASLIQK  274 (335)
T ss_dssp             SSHHHHHHHHHHTCCCC-------------------------------------------------CTTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHhcCCCCC-------------------------------------------------CccCCHHHHHHHHH
Confidence            76655544433221111                                                 12345668899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ||+.||++|||++|+|+||||++.+.
T Consensus       275 ~l~~dp~~Rps~~ell~~~~~~~~~~  300 (335)
T 2owb_A          275 MLQTDPTARPTINELLNDEFFTSGYI  300 (335)
T ss_dssp             HTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             HccCChhHCcCHHHHhcCccccCCCc
Confidence            99999999999999999999987664

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.5e-48  Score=371.56  Aligned_cols=284  Identities=24%  Similarity=0.499  Sum_probs=214.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--CCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--RNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--~~~~  171 (432)
                      .++|++.+.||+|+||+||+|++..+++.||||+++..  ....+.+|+.+++.+.+    |+||+++++++..  ....
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~----~~~i~~~~~~~~~~~~~~~  108 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRG----GPNIITLADIVKDPVSRTP  108 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTT----STTBCCEEEEEECTTTCCE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCC----CCCEEEeeeeeccCCCCce
Confidence            57899999999999999999999999999999998743  24568899999999972    3999999999987  6789


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      ++||||+ +++|.+++..     +++..++.++.||+.||.|||++||+||||||+|||++.++                
T Consensus       109 ~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~----------------  167 (330)
T 3nsz_A          109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH----------------  167 (330)
T ss_dssp             EEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT----------------
T ss_pred             EEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCC----------------
Confidence            9999999 8999998853     89999999999999999999999999999999999976432                


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCC-CCCc
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ-THEN  326 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~-~~~~  326 (432)
                                ..+||+|||++.....  ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||. +.+.
T Consensus       168 ----------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~  237 (330)
T 3nsz_A          168 ----------RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  237 (330)
T ss_dssp             ----------TEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             ----------CEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch
Confidence                      3578888888765332  2344578999999999987 568999999999999999999999995 4455


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCc---hh-hhhhhhhcccchHHHHHHHH
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP---RL-QNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~l~~li~  402 (432)
                      .+.+..+....+..+..  ...        .......+      ..........   .. ..........+++.+.+||.
T Consensus       238 ~~~l~~~~~~~~~~~~~--~~~--------~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  301 (330)
T 3nsz_A          238 YDQLVRIAKVLGTEDLY--DYI--------DKYNIELD------PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD  301 (330)
T ss_dssp             HHHHHHHHHHHCHHHHH--HHH--------HHTTCCCC------THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHH
T ss_pred             HHHHHHHHHhcCCchhh--hHH--------HHhccccc------cchhhhhhhccccchhhhccccccccCCHHHHHHHH
Confidence            56666666655532211  100        00000000      0000000000   00 00111122346788999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCccC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRDYYR  430 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~~~~  430 (432)
                      +||+.||++|||++|+|+||||++...+
T Consensus       302 ~~L~~dP~~Rpta~e~l~hp~f~~~~~~  329 (330)
T 3nsz_A          302 KLLRYDHQSRLTAREAMEHPYFYTVVKD  329 (330)
T ss_dssp             TTSCSSGGGSCCHHHHHTSGGGTTCC--
T ss_pred             HHhcCCcccCCCHHHHhcCccHhhhccC
Confidence            9999999999999999999999986643

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.4e-48  Score=373.79  Aligned_cols=254  Identities=28%  Similarity=0.436  Sum_probs=200.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .++|++++.||+|+||.||+|.+ .+++.||||++...   ....+.+.+|+.++..+.|   .++||+++++++...+.
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~~~iv~~~~~~~~~~~   83 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---HSDKIIRLYDYEITDQY   83 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT---TCTTBCCEEEEEECSSE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhh---cCCceEEEeeeEeeCCE
Confidence            56899999999999999999987 46899999998743   2334667889999999976   34899999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          171 ICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       171 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +|+|||+.+++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+++                  
T Consensus        84 ~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~------------------  143 (343)
T 3dbq_A           84 IYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD------------------  143 (343)
T ss_dssp             EEEEECCCSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET------------------
T ss_pred             EEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEEC------------------
Confidence            99999977999999998864  6999999999999999999999999999999999999742                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhC-----------CCCCccchHHHHHHHHHHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILG-----------LGWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~-----------~~~~~~sDiwSlGvil~el  314 (432)
                                +.+||+|||++......     ....+||+.|+|||++.+           ..++.++|||||||++|+|
T Consensus       144 ----------~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~el  213 (343)
T 3dbq_A          144 ----------GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM  213 (343)
T ss_dssp             ----------TEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHH
T ss_pred             ----------CcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHH
Confidence                      34777777777654322     224579999999999975           5688999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          315 CSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       315 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      ++|..||........  .+.....+.                  ....+                          +...+
T Consensus       214 l~g~~pf~~~~~~~~--~~~~~~~~~------------------~~~~~--------------------------~~~~~  247 (343)
T 3dbq_A          214 TYGKTPFQQIINQIS--KLHAIIDPN------------------HEIEF--------------------------PDIPE  247 (343)
T ss_dssp             HHSSCTTTTCCSHHH--HHHHHHCTT------------------SCCCC--------------------------CCCSC
T ss_pred             HhCCCcchhhhhHHH--HHHHHhcCC------------------cccCC--------------------------cccCC
Confidence            999999976443211  111111100                  00011                          12334


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ..+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       248 ~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          248 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence            568899999999999999999999999999753

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=9.8e-49  Score=364.86  Aligned_cols=252  Identities=25%  Similarity=0.423  Sum_probs=211.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++.+.||+|+||.||+|.+..+++.||||++....    .....+.+|+.++..++|     +||+++++++...+
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~   87 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-----PNILRMYNYFHDRK   87 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC-----TTBCCEEEEEECSS
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCC-----CCEeeEEEEEEcCC
Confidence            468999999999999999999999999999999997532    223567889999888876     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+||+++.                
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~----------------  149 (284)
T 2vgo_A           88 RIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGY----------------  149 (284)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECT----------------
T ss_pred             EEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcC----------------
Confidence            999999999 889999998765  6999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                                 ++.++|+|||++..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus       150 -----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  218 (284)
T 2vgo_A          150 -----------KGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT  218 (284)
T ss_dssp             -----------TCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             -----------CCCEEEecccccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh
Confidence                       44577777776654332 233457899999999999999999999999999999999999999887665


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+.......                                                 +..++..+.+||.+||+.
T Consensus       219 ~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~li~~~l~~  249 (284)
T 2vgo_A          219 ETHRRIVNVDLKF-------------------------------------------------PPFLSDGSKDLISKLLRY  249 (284)
T ss_dssp             HHHHHHHTTCCCC-------------------------------------------------CTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHhccccCC-------------------------------------------------CCcCCHHHHHHHHHHhhc
Confidence            5444332211111                                                 123556688999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCc
Q 047395          408 DPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||.+|||++|+++||||+...
T Consensus       250 ~p~~Rps~~~ll~h~~~~~~~  270 (284)
T 2vgo_A          250 HPPQRLPLKGVMEHPWVKANS  270 (284)
T ss_dssp             SGGGSCCHHHHHTCHHHHHHC
T ss_pred             CHhhCCCHHHHhhCHHHHhhc
Confidence            999999999999999997644

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=5.1e-49  Score=365.54  Aligned_cols=252  Identities=25%  Similarity=0.455  Sum_probs=184.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh----hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK----YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++.+.||+|+||.||+|++..+++.||||++.....    ....+.+|+.++..++|     +||+++++++...+.
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~   85 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH-----PSILELYNYFEDSNY   85 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCC-----TTBCCEEEEEECSSE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCC-----CCeEeEEEEEccCCe
Confidence            579999999999999999999999999999999975432    23567788888887766     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.                 
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~-----------------  147 (278)
T 3cok_A           86 VYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR-----------------  147 (278)
T ss_dssp             EEEEEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECT-----------------
T ss_pred             EEEEEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC-----------------
Confidence            99999999 889999998753 46999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                ++.++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus       148 ----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  217 (278)
T 3cok_A          148 ----------NMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV  217 (278)
T ss_dssp             ----------TCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSC
T ss_pred             ----------CCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhH
Confidence                      455777777776553321   2235789999999999998899999999999999999999999986543


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+....+.                       .....                          .+..++..+.+||.+||+
T Consensus       218 ~~~~~~~~-----------------------~~~~~--------------------------~~~~~~~~~~~li~~~l~  248 (278)
T 3cok_A          218 KNTLNKVV-----------------------LADYE--------------------------MPSFLSIEAKDLIHQLLR  248 (278)
T ss_dssp             C-----CC-----------------------SSCCC--------------------------CCTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHHh-----------------------hcccC--------------------------CccccCHHHHHHHHHHcc
Confidence            32211100                       00000                          112356678999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCc
Q 047395          407 YDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .||++|||++++++||||++..
T Consensus       249 ~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          249 RNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             SSGGGSCCHHHHTTSTTTC---
T ss_pred             cCHhhCCCHHHHhcCccccCCC
Confidence            9999999999999999998754

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.6e-48  Score=365.17  Aligned_cols=255  Identities=28%  Similarity=0.443  Sum_probs=212.9

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|++...    ....+.+.+|+.+++.+.|     +||+++++++..
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~   86 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH-----QHVVGFHGFFED   86 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEEEC
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCC-----CCEeeeeeeecc
Confidence            3457899999999999999999999999999999998643    2345677889998888866     999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .+..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.              
T Consensus        87 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--------------  150 (294)
T 2rku_A           87 NDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--------------  150 (294)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--------------
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcC--------------
Confidence            99999999999 899999998764  6999999999999999999999999999999999999654              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                   ++.++|+|||.+....   .......||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus       151 -------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  217 (294)
T 2rku_A          151 -------------DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  217 (294)
T ss_dssp             -------------TCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             -------------CCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                         4557777777665432   222345789999999999998899999999999999999999999988


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      ....+....+.......                                                 +..+++.+.+||.+
T Consensus       218 ~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~li~~  248 (294)
T 2rku_A          218 SCLKETYLRIKKNEYSI-------------------------------------------------PKHINPVAASLIQK  248 (294)
T ss_dssp             SSHHHHHHHHHTTCCCC-------------------------------------------------CTTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHhhccCCC-------------------------------------------------ccccCHHHHHHHHH
Confidence            76655443332211111                                                 12345668899999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ||+.||++|||++|+++||||++...
T Consensus       249 ~l~~~p~~Rps~~~ll~~~~~~~~~~  274 (294)
T 2rku_A          249 MLQTDPTARPTINELLNDEFFTSGYI  274 (294)
T ss_dssp             HTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             HcccChhhCcCHHHHhhChheecCCc
Confidence            99999999999999999999987654

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.4e-49  Score=390.57  Aligned_cols=262  Identities=29%  Similarity=0.469  Sum_probs=204.6

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---------hhhHhHHHHHHHHHHHHhcCCCCCceeEe
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---------KYREAAMTEIDVLELLKRYDRSGSRCVQI  161 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~  161 (432)
                      ..+.++|++.+.||+|+||+||+|.+..+++.||||++....         .....+.+|+.++..+.|     |||+++
T Consensus       131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~l  205 (419)
T 3i6u_A          131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH-----PCIIKI  205 (419)
T ss_dssp             HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCC-----TTBCCC
T ss_pred             hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCC-----CCEeeE
Confidence            345689999999999999999999999999999999997532         112357789999999977     999999


Q ss_pred             ecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCC
Q 047395          162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       162 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      ++++.. +..|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+       
T Consensus       206 ~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~-------  275 (419)
T 3i6u_A          206 KNFFDA-EDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ-------  275 (419)
T ss_dssp             CEEEES-SEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-------
T ss_pred             EEEEec-CceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecC-------
Confidence            999864 4589999999 999999887654  69999999999999999999999999999999999998642       


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhC---CCCCccchHHHHHHHHHHHH
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvil~ell  315 (432)
                                       +....+||+|||++......  ....+||+.|+|||++.+   ..++.++|||||||++|+|+
T Consensus       276 -----------------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~ll  338 (419)
T 3i6u_A          276 -----------------EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL  338 (419)
T ss_dssp             -----------------SSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHH
T ss_pred             -----------------CCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHH
Confidence                             23456899999988765433  234679999999999864   56788999999999999999


Q ss_pred             hCCCCCCCCCcHH-HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          316 SGEALFQTHENLE-HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       316 tg~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      +|..||....... ....+.......+                                             ......++
T Consensus       339 tg~~pf~~~~~~~~~~~~i~~~~~~~~---------------------------------------------~~~~~~~~  373 (419)
T 3i6u_A          339 SGYPPFSEHRTQVSLKDQITSGKYNFI---------------------------------------------PEVWAEVS  373 (419)
T ss_dssp             HSSCSSCCCSSSCCHHHHHHTTCCCCC---------------------------------------------HHHHTTSC
T ss_pred             HCCCCCCCCcchHHHHHHHhcCCCCCC---------------------------------------------chhhcccC
Confidence            9999997654322 1111111111111                                             11123567


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      +.+.+||.+||+.||++|||++|+|+||||++...
T Consensus       374 ~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~  408 (419)
T 3i6u_A          374 EKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM  408 (419)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHHH
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhCCcccCChhH
Confidence            77999999999999999999999999999987543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=1.1e-48  Score=364.11  Aligned_cols=261  Identities=26%  Similarity=0.478  Sum_probs=215.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh-------hhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      +.++|++.+.||+|+||.||+|++..+++.||+|+++....       ..+.+.+|+.++..++|     +||+++++++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~   77 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH-----PNIITLHDIF   77 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC-----TTBCCEEEEE
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCC-----CCeeehhhee
Confidence            45689999999999999999999999999999999874321       25678899999999876     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ...+..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+||+++.++          
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~----------  145 (283)
T 3bhy_A           78 ENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN----------  145 (283)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS----------
T ss_pred             cCCCeEEEEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCC----------
Confidence            9999999999999 899999998754  699999999999999999999999999999999999986533          


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                   .....++|+|||.+......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       146 -------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  212 (283)
T 3bhy_A          146 -------------VPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  212 (283)
T ss_dssp             -------------SSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             -------------CCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCC
Confidence                         12346889999988764332  234578999999999999899999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.+..+....+.......+..                                             .....+..+.+||.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~li~  247 (283)
T 3bhy_A          213 GETKQETLTNISAVNYDFDEE---------------------------------------------YFSNTSELAKDFIR  247 (283)
T ss_dssp             CSSHHHHHHHHHTTCCCCCHH---------------------------------------------HHTTCCHHHHHHHH
T ss_pred             CcchHHHHHHhHhcccCCcch---------------------------------------------hcccCCHHHHHHHH
Confidence            877666555443332222211                                             11345667899999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +||+.||++|||+.|+|+||||+...
T Consensus       248 ~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          248 RLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             TTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             HHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            99999999999999999999997643

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2.4e-49  Score=381.73  Aligned_cols=301  Identities=22%  Similarity=0.337  Sum_probs=215.2

Q ss_pred             cCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           89 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        89 ~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .++...++|++.+.||+|+||+||+|.+..+++.||+|+++..  ......+.+|+.++..+.|     +||+++++++.
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~  101 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-----PYIVGFYGAFY  101 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCC-----TTBCCEEEEEE
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCC-----CCEEEEeEEEE
Confidence            3556678999999999999999999999999999999999753  3445678889988888766     99999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCCcEEeecCCccccCCcccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ..+..|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++ ||+||||||+|||++             
T Consensus       102 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~-------------  166 (360)
T 3eqc_A          102 SDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-------------  166 (360)
T ss_dssp             ETTEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC-------------
T ss_pred             ECCEEEEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC-------------
Confidence            999999999999 889999998865  699999999999999999999986 999999999999965             


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCccccc-CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH-QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                    .++.++|+|||++.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus       167 --------------~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  232 (360)
T 3eqc_A          167 --------------SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  232 (360)
T ss_dssp             --------------TTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred             --------------CCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                          44567888888775432 223445799999999999999999999999999999999999999988


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+..+....+.......+.............+........+ .......+.......    ........++..+.+||.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~  307 (360)
T 3eqc_A          233 PDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRP-PMAIFELLDYIVNEP----PPKLPSGVFSLEFQDFVNK  307 (360)
T ss_dssp             CCHHHHHHHHC-------------------------------CCCHHHHHHHHHHSC----CCCCCTTTSCHHHHHHHHH
T ss_pred             CCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCC-cccchhhhhHHhccC----CCCCCcccccHHHHHHHHH
Confidence            76655433322111111100000000000000000000000 000000000000000    0001113467789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||+.||++|||++|+|+||||++..
T Consensus       308 ~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          308 CLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             HHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             HhhcChhhCCCHHHHhhChHhhcch
Confidence            9999999999999999999997643

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.3e-49  Score=376.63  Aligned_cols=247  Identities=27%  Similarity=0.453  Sum_probs=206.3

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh---------hhHhHHHHHHHHHHHHhcCCCCCceeEee
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---------YREAAMTEIDVLELLKRYDRSGSRCVQIR  162 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~iv~~~  162 (432)
                      .+.++|++.+.||+|+||+||+|++..+++.||||+++....         ....+.+|+.++..++|     +||++++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~Iv~~~   95 (335)
T 3dls_A           21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEH-----ANIIKVL   95 (335)
T ss_dssp             HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCC-----TTBCCEE
T ss_pred             ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCC-----CCEeeEE
Confidence            456799999999999999999999999999999999975431         33467789999998876     9999999


Q ss_pred             cccccCCeEEEEEccC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCC
Q 047395          163 NWFDYRNHICIVFEML-GP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       163 ~~~~~~~~~~lv~e~~-~~-~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      +++...+.+++||||+ ++ +|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.        
T Consensus        96 ~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--------  165 (335)
T 3dls_A           96 DIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAE--------  165 (335)
T ss_dssp             EEEECSSEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--------
T ss_pred             EEEeeCCEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcC--------
Confidence            9999999999999988 55 9999998764  6999999999999999999999999999999999999654        


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhC
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg  317 (432)
                                         ++.+||+|||++......  ....+||+.|+|||++.+..+ +.++|||||||++|+|++|
T Consensus       166 -------------------~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  226 (335)
T 3dls_A          166 -------------------DFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFE  226 (335)
T ss_dssp             -------------------TSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHS
T ss_pred             -------------------CCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhC
Confidence                               456777888877654332  234579999999999998876 7899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ..||.......                            . ..                          ...+..+++.+
T Consensus       227 ~~pf~~~~~~~----------------------------~-~~--------------------------~~~~~~~~~~l  251 (335)
T 3dls_A          227 ENPFCELEETV----------------------------E-AA--------------------------IHPPYLVSKEL  251 (335)
T ss_dssp             SCSCSSGGGGT----------------------------T-TC--------------------------CCCSSCCCHHH
T ss_pred             CCchhhHHHHH----------------------------h-hc--------------------------cCCCcccCHHH
Confidence            99996422100                            0 00                          00112356778


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .+||.+||+.||++|||+.|+++||||++.
T Consensus       252 ~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          252 MSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence            999999999999999999999999999874

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=2.1e-48  Score=378.67  Aligned_cols=253  Identities=27%  Similarity=0.438  Sum_probs=201.8

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ..+|++.+.||+|+||+||+|.+.. ++.||||++...   ....+.+.+|+.++..+.+   .|+||+++++++...+.
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~---~~~~iv~~~~~~~~~~~  130 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---HSDKIIRLYDYEITDQY  130 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT---TCTTBCCEEEEEECSSE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHccc---CCCeEEEEEEEEecCCE
Confidence            3469999999999999999999865 899999999643   3345678899999999975   35999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          171 ICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       171 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      +|+|||+.+++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++                   
T Consensus       131 ~~lv~E~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-------------------  189 (390)
T 2zmd_A          131 IYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-------------------  189 (390)
T ss_dssp             EEEEEECCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-------------------
T ss_pred             EEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-------------------
Confidence            99999976999999998865  689999999999999999999999999999999999973                   


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhC-----------CCCCccchHHHHHHHHHHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILG-----------LGWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~-----------~~~~~~sDiwSlGvil~el  314 (432)
                               ++.+||+|||++......     ....+||+.|+|||++.+           ..++.++|||||||++|+|
T Consensus       190 ---------~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~el  260 (390)
T 2zmd_A          190 ---------DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM  260 (390)
T ss_dssp             ---------SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHH
T ss_pred             ---------CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHH
Confidence                     245777888877654322     234579999999999976           3688999999999999999


Q ss_pred             HhCCCCCCCCCcH-HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccc
Q 047395          315 CSGEALFQTHENL-EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS  393 (432)
Q Consensus       315 ltg~~pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (432)
                      ++|..||...... ..+..+   ....                  ....+                          +...
T Consensus       261 l~G~~Pf~~~~~~~~~~~~~---~~~~------------------~~~~~--------------------------~~~~  293 (390)
T 2zmd_A          261 TYGKTPFQQIINQISKLHAI---IDPN------------------HEIEF--------------------------PDIP  293 (390)
T ss_dssp             HHSSCTTTTCCCHHHHHHHH---HCTT------------------SCCCC--------------------------CCCS
T ss_pred             HHCCCcchhhhHHHHHHHHH---hCcc------------------ccCCC--------------------------Cccc
Confidence            9999999765432 222111   1100                  00011                          1223


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       394 ~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +..+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       294 ~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          294 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             hHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence            4568899999999999999999999999999653

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.7e-48  Score=371.14  Aligned_cols=251  Identities=27%  Similarity=0.365  Sum_probs=195.1

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec--hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC-
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN-  169 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~-  169 (432)
                      +.++|++.+.||+|+||.||+|++..+++.||||+++.  .....+.+.+|+.++..++|     |||+++++++.... 
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~~~~~~~~~~~   78 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH-----PGIVRYFNAWLETPP   78 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCC-----TTBCCEEEEEEECCS
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCC-----CCEeeEEEEEEEecc
Confidence            45789999999999999999999999999999999973  23345678899999998876     99999999874332 


Q ss_pred             --------------------------------------------------------eEEEEEccC-CCCHHHHHHhcCC-
Q 047395          170 --------------------------------------------------------HICIVFEML-GPSLYDFLRKNNY-  191 (432)
Q Consensus       170 --------------------------------------------------------~~~lv~e~~-~~~L~~~l~~~~~-  191 (432)
                                                                              .+++||||| +++|.+++..... 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL  158 (332)
T ss_dssp             CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG
T ss_pred             chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc
Confidence                                                                    489999999 9999999987542 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCc
Q 047395          192 RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST  271 (432)
Q Consensus       192 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  271 (432)
                      ...++..++.++.||+.||.|||++||+||||||+|||++.++.                           +||+|||++
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~---------------------------~kL~DfG~a  211 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV---------------------------VKVGDFGLV  211 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC---------------------------EEECCCTTC
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCC---------------------------EEEeecCcc
Confidence            23556678999999999999999999999999999999765554                           555555554


Q ss_pred             ccccC---------------CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Q 047395          272 AYEHQ---------------EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERV  336 (432)
Q Consensus       272 ~~~~~---------------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~  336 (432)
                      .....               .....+||+.|+|||++.+..++.++|||||||++|+|++|..|+.     +....+...
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----~~~~~~~~~  286 (332)
T 3qd2_B          212 TAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----ERVRIITDV  286 (332)
T ss_dssp             EECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHHHHHH
T ss_pred             cccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----HHHHHHHHh
Confidence            43322               1233579999999999999999999999999999999999876642     111111111


Q ss_pred             h-CCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCH
Q 047395          337 L-GPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTA  415 (432)
Q Consensus       337 ~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta  415 (432)
                      . ...|..                                              ....++.+.+||.+||+.||++|||+
T Consensus       287 ~~~~~~~~----------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rps~  320 (332)
T 3qd2_B          287 RNLKFPLL----------------------------------------------FTQKYPQEHMMVQDMLSPSPTERPEA  320 (332)
T ss_dssp             HTTCCCHH----------------------------------------------HHHHCHHHHHHHHHHHCSSGGGSCCH
T ss_pred             hccCCCcc----------------------------------------------cccCChhHHHHHHHHccCCCCcCCCH
Confidence            1 111111                                              11234557899999999999999999


Q ss_pred             HHHhcCCCCCC
Q 047395          416 HDALKHPFFTR  426 (432)
Q Consensus       416 ~elL~hp~f~~  426 (432)
                      .|+|+||||++
T Consensus       321 ~~~l~~~~f~~  331 (332)
T 3qd2_B          321 TDIIENAIFEN  331 (332)
T ss_dssp             HHHHHSTTCCC
T ss_pred             HHHhhchhhhc
Confidence            99999999986

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=1.4e-48  Score=362.21  Aligned_cols=256  Identities=27%  Similarity=0.406  Sum_probs=204.1

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      |+...++|++.+.||+|+||.||+|.+..+++.||||++....    .....+.+|+.+++.+.|     +||+++++++
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~   80 (276)
T 2h6d_A            6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH-----PHIIKLYQVI   80 (276)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC-----TTBCCEEEEE
T ss_pred             CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCC-----CCEeEEEEEE
Confidence            4455689999999999999999999999999999999997533    223567789988888766     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ...+..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.            
T Consensus        81 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~------------  146 (276)
T 2h6d_A           81 STPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA------------  146 (276)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECT------------
T ss_pred             ecCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECC------------
Confidence            9999999999999 899999998765  6999999999999999999999999999999999999654            


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg~~pf  321 (432)
                                     ++.++|+|||++......  .....||+.|+|||++.+..+ +.++|||||||++|+|++|..||
T Consensus       147 ---------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  211 (276)
T 2h6d_A          147 ---------------HMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF  211 (276)
T ss_dssp             ---------------TSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ---------------CCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence                           445677777766543322  233568999999999988765 58999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ...........+.......                                                 +..++..+.+||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~l~~li  242 (276)
T 2h6d_A          212 DDEHVPTLFKKIRGGVFYI-------------------------------------------------PEYLNRSVATLL  242 (276)
T ss_dssp             CCSSHHHHHHHHHHCCCCC-------------------------------------------------CTTSCHHHHHHH
T ss_pred             CCCcHHHHHHHhhcCcccC-------------------------------------------------chhcCHHHHHHH
Confidence            8766555444433221111                                                 123455688999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .+||+.||++|||+.|+++||||++..
T Consensus       243 ~~~l~~~p~~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          243 MHMLQVDPLKRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             HHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             HHHccCChhhCCCHHHHHhChhhccCc
Confidence            999999999999999999999998764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=4.2e-49  Score=381.51  Aligned_cols=262  Identities=14%  Similarity=0.146  Sum_probs=192.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeec----hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc-----
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF-----  165 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~-----  165 (432)
                      ..|++.+.||+|+||+||+|++..+++.||||+++.    .....+.+.+|+.++..|.+   .||||++++..+     
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~---~hp~iv~~~~~~~~p~d  138 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG---ESPEEARDRRRLLLPSD  138 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-------------CBCCCCE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc---cChhhhhhceeEEeeeh
Confidence            459999999999999999999999999999999986    33455677888888888874   349988755322     


Q ss_pred             --ccC-----------------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHH------HHHHHHHHHHHHHHHhCCcEe
Q 047395          166 --DYR-----------------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLV------REIGRQLLECVAFMHDLRLIH  220 (432)
Q Consensus       166 --~~~-----------------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~------~~i~~qi~~aL~~LH~~~ivH  220 (432)
                        ...                 ..+|+||||++++|.+++.... ..+++...      ..++.||+.||+|||++||+|
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivH  217 (371)
T 3q60_A          139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVH  217 (371)
T ss_dssp             EEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             heecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCcc
Confidence              211                 4489999999999999998753 23555555      677799999999999999999


Q ss_pred             ccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC--CCC
Q 047395          221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG--LGW  298 (432)
Q Consensus       221 rDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~  298 (432)
                      |||||+|||++.                           ++.+||+|||++...........+|+.|+|||++.+  ..+
T Consensus       218 rDikp~NIll~~---------------------------~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  270 (371)
T 3q60_A          218 GHFTPDNLFIMP---------------------------DGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATF  270 (371)
T ss_dssp             TTCSGGGEEECT---------------------------TSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEEC
T ss_pred             CcCCHHHEEECC---------------------------CCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCc
Confidence            999999999654                           456777888877765554435567899999999987  679


Q ss_pred             CccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhc
Q 047395          299 SYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK  378 (432)
Q Consensus       299 ~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (432)
                      +.++|||||||++|+|++|..||.+......                ......  ........                 
T Consensus       271 ~~~~DiwSlG~il~elltg~~Pf~~~~~~~~----------------~~~~~~--~~~~~~~~-----------------  315 (371)
T 3q60_A          271 THALNAWQLGLSIYRVWCLFLPFGLVTPGIK----------------GSWKRP--SLRVPGTD-----------------  315 (371)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSTTBCCTTCT----------------TCCCBC--CTTSCCCC-----------------
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCCcCcccc----------------cchhhh--hhhhcccc-----------------
Confidence            9999999999999999999999976532100                000000  00000000                 


Q ss_pred             CchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                           .........+++.+.+||.+||+.||++|||+.|+|+||||++.
T Consensus       316 -----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  359 (371)
T 3q60_A          316 -----SLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL  359 (371)
T ss_dssp             -----SCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred             -----ccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence                 00011123567889999999999999999999999999999753

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.8e-48  Score=370.34  Aligned_cols=261  Identities=23%  Similarity=0.407  Sum_probs=207.3

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc---
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY---  167 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~---  167 (432)
                      ....++|++.+.||+|+||.||+|++..+++.||||++.........+.+|+.++..+.+    |+||+++++++..   
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~----h~~i~~~~~~~~~~~~   95 (326)
T 2x7f_A           20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH----HRNIATYYGAFIKKNP   95 (326)
T ss_dssp             CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCC----STTBCCEEEEEEECC-
T ss_pred             cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccC----CCCeeeeeeEEeeccC
Confidence            445789999999999999999999999999999999997665566788899999998832    3999999999875   


Q ss_pred             ---CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          168 ---RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       168 ---~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                         .+.+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.           
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~-----------  164 (326)
T 2x7f_A           96 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE-----------  164 (326)
T ss_dssp             -CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT-----------
T ss_pred             ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcC-----------
Confidence               56899999999 789999998754456999999999999999999999999999999999999654           


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHh-----CCCCCccchHHHHHHHHHHHH
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvil~ell  315 (432)
                                      ++.++|+|||++......   .....||+.|+|||++.     +..++.++|||||||++|+|+
T Consensus       165 ----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~  228 (326)
T 2x7f_A          165 ----------------NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA  228 (326)
T ss_dssp             ----------------TCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHH
T ss_pred             ----------------CCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHH
Confidence                            445677777766543321   23457899999999997     456889999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchH
Q 047395          316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG  395 (432)
Q Consensus       316 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (432)
                      +|..||...+.......+.....+.                                               .....++.
T Consensus       229 ~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~  261 (326)
T 2x7f_A          229 EGAPPLCDMHPMRALFLIPRNPAPR-----------------------------------------------LKSKKWSK  261 (326)
T ss_dssp             HSSCTTTTSCHHHHHHHHHHSCCCC-----------------------------------------------CSCSCSCH
T ss_pred             hCCCCCCCCcHHHHHHHhhcCcccc-----------------------------------------------CCccccCH
Confidence            9999998766554443332211000                                               00124566


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          396 YLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       396 ~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      .+.+||.+||..||.+|||+.|+++||||++...
T Consensus       262 ~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  295 (326)
T 2x7f_A          262 KFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPN  295 (326)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred             HHHHHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence            7899999999999999999999999999987543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=3.1e-48  Score=368.16  Aligned_cols=261  Identities=30%  Similarity=0.478  Sum_probs=208.3

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---------hhhHhHHHHHHHHHHHHhcCCCCCceeEe
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---------KYREAAMTEIDVLELLKRYDRSGSRCVQI  161 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~  161 (432)
                      ..+.++|++.+.||+|+||.||+|++..+++.||||++....         .....+.+|+.++..+.|     +||+++
T Consensus         6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~   80 (322)
T 2ycf_A            6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH-----PCIIKI   80 (322)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCC-----TTBCCE
T ss_pred             hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCC-----CCCceE
Confidence            345678999999999999999999999999999999986432         123457789999999876     999999


Q ss_pred             ecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCC
Q 047395          162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       162 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      ++++.... .|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++      
T Consensus        81 ~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~------  151 (322)
T 2ycf_A           81 KNFFDAED-YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------  151 (322)
T ss_dssp             EEEEESSS-EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS------
T ss_pred             eeEEcCCc-eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCC------
Confidence            99987655 89999999 889999997654  699999999999999999999999999999999999986532      


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHh---CCCCCccchHHHHHHHHHHHH
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvil~ell  315 (432)
                                        ....+||+|||++.......  ....||+.|+|||++.   ...++.++|||||||++|+|+
T Consensus       152 ------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~  213 (322)
T 2ycf_A          152 ------------------EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL  213 (322)
T ss_dssp             ------------------SSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHH
T ss_pred             ------------------CCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHH
Confidence                              23468999999887654432  2357899999999985   456889999999999999999


Q ss_pred             hCCCCCCCCCcHH-HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          316 SGEALFQTHENLE-HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       316 tg~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      +|..||....... ....+........                                             ......++
T Consensus       214 ~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~  248 (322)
T 2ycf_A          214 SGYPPFSEHRTQVSLKDQITSGKYNFI---------------------------------------------PEVWAEVS  248 (322)
T ss_dssp             HSSCSSCSTTCSSCHHHHHHHTCCCCC---------------------------------------------HHHHTTSC
T ss_pred             hCCCCCcccchHHHHHHHHHhCccccC---------------------------------------------chhhhhcC
Confidence            9999997654321 1222211111111                                             01123456


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ..+.+||.+||+.||++|||+.|+|+||||++..
T Consensus       249 ~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~  282 (322)
T 2ycf_A          249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  282 (322)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHH
T ss_pred             HHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHH
Confidence            7789999999999999999999999999998754

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=5.8e-48  Score=362.77  Aligned_cols=264  Identities=25%  Similarity=0.420  Sum_probs=210.1

Q ss_pred             eecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           87 FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        87 ~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      +..+....++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.++..+.|     +||+++++++
T Consensus        11 ~~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~   85 (302)
T 2j7t_A           11 VRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDH-----PYIVKLLGAY   85 (302)
T ss_dssp             CBSSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCC-----TTBCCEEEEE
T ss_pred             cccccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCC-----CCEeeeeeee
Confidence            3445566789999999999999999999999999999999986432 344677889999988866     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ...+..++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.            
T Consensus        86 ~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~------------  152 (302)
T 2j7t_A           86 YHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL------------  152 (302)
T ss_dssp             ECC-CEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT------------
T ss_pred             eeCCeEEEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECC------------
Confidence            9999999999999 889999988654 46999999999999999999999999999999999999654            


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHh-----CCCCCccchHHHHHHHHHHHHh
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvil~ellt  316 (432)
                                     ++.++|+|||++....   .......||+.|+|||++.     +..++.++|||||||++|+|++
T Consensus       153 ---------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~  217 (302)
T 2j7t_A          153 ---------------EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ  217 (302)
T ss_dssp             ---------------TSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhc
Confidence                           4557777777654321   1223457899999999984     5678999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       317 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      |..||...+.......+.....+..                                              .....++..
T Consensus       218 g~~p~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~  251 (302)
T 2j7t_A          218 IEPPHHELNPMRVLLKIAKSDPPTL----------------------------------------------LTPSKWSVE  251 (302)
T ss_dssp             SSCTTTTSCHHHHHHHHHHSCCCCC----------------------------------------------SSGGGSCHH
T ss_pred             CCCCCccCCHHHHHHHHhccCCccc----------------------------------------------CCccccCHH
Confidence            9999988776554443322111000                                              011245667


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      +.+||.+||+.||++|||+.|+++||||++...
T Consensus       252 l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  284 (302)
T 2j7t_A          252 FRDFLKIALDKNPETRPSAAQLLEHPFVSSITS  284 (302)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCC
T ss_pred             HHHHHHHHcccChhhCCCHHHHhcChHHhhhcc
Confidence            899999999999999999999999999987543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=3.2e-50  Score=390.17  Aligned_cols=248  Identities=17%  Similarity=0.253  Sum_probs=195.8

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEee-------
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIR-------  162 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~-------  162 (432)
                      .++|++.+.||+|+||+||+|++..+|+.||||+++..    ....+.+.+|+.+++.+...  .||||++++       
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l--~hpniv~~~~~~~~~~  149 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI--KNQKQAKVHLRFIFPF  149 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTC--CSHHHHHHHHCBCCCS
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhcccc--CCHHHHHHHhhhhhhh
Confidence            57899999999999999999999999999999998632    23456788899766666432  359999988       


Q ss_pred             cccccCC-----------------eEEEEEccCCCCHHHHHHhcCCCCCCH-------HHHHHHHHHHHHHHHHHHhCCc
Q 047395          163 NWFDYRN-----------------HICIVFEMLGPSLYDFLRKNNYRPFPV-------DLVREIGRQLLECVAFMHDLRL  218 (432)
Q Consensus       163 ~~~~~~~-----------------~~~lv~e~~~~~L~~~l~~~~~~~l~~-------~~~~~i~~qi~~aL~~LH~~~i  218 (432)
                      ++++..+                 ..|+||||++|+|.+++....  .+++       ..++.++.||+.||+|||++||
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~--~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  227 (377)
T 3byv_A          150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL--SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGL  227 (377)
T ss_dssp             EEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHH--HTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhcc--ccccccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4444332                 389999999999999998753  3444       7888899999999999999999


Q ss_pred             EeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC--
Q 047395          219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL--  296 (432)
Q Consensus       219 vHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--  296 (432)
                      +||||||+|||++.                           ++.+||+|||++..........+| +.|+|||++.+.  
T Consensus       228 vHrDikp~NIll~~---------------------------~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~  279 (377)
T 3byv_A          228 VHTYLRPVDIVLDQ---------------------------RGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRAT  279 (377)
T ss_dssp             ECSCCCGGGEEECT---------------------------TCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTS
T ss_pred             ecCCCCHHHEEEcC---------------------------CCCEEEEechhheecCCcccCCCC-cCccChhhhccccc
Confidence            99999999999654                           456777888877765555556678 999999999987  


Q ss_pred             ---------CCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCC
Q 047395          297 ---------GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGA  367 (432)
Q Consensus       297 ---------~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (432)
                               .++.++|||||||++|||++|..||.+.+......                      .             
T Consensus       280 ~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~----------------------~-------------  324 (377)
T 3byv_A          280 ISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE----------------------W-------------  324 (377)
T ss_dssp             THHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSG----------------------G-------------
T ss_pred             ccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchh----------------------h-------------
Confidence                     79999999999999999999999996543211000                      0             


Q ss_pred             CCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          368 TSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                                        .......+++.+.+||.+||+.||++|||+.|+++||||++
T Consensus       325 ------------------~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          325 ------------------IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             ------------------GGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             ------------------hhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence                              00111356777999999999999999999999999999975

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1.2e-47  Score=358.68  Aligned_cols=253  Identities=23%  Similarity=0.399  Sum_probs=204.3

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc----
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY----  167 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~----  167 (432)
                      ..|++.+.||+|+||.||+|.+..++..||+|++...   ......+.+|+.+++.+.|     +||+++++++..    
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~~~~  100 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH-----PNIVRFYDSWESTVKG  100 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEEEEESSS
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCC-----CCeeeeeeeeccccCC
Confidence            4699999999999999999999999999999998743   3345567889998888866     999999998764    


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cEeccCCCCcEEeecCCccccCCcccc
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ...+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++|  |+||||||+|||++.            
T Consensus       101 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~------------  166 (290)
T 1t4h_A          101 KKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG------------  166 (290)
T ss_dssp             CEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS------------
T ss_pred             CceEEEEEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEEC------------
Confidence            46799999999 889999998764  6999999999999999999999999  999999999999741            


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                    .++.+||+|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||..
T Consensus       167 --------------~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~  231 (290)
T 1t4h_A          167 --------------PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             --------------TTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             --------------CCCCEEEeeCCCcccccccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence                          3456888888877654433 234578999999998875 589999999999999999999999987


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      ............. +..+                                             .......++.+.+||.+
T Consensus       232 ~~~~~~~~~~~~~-~~~~---------------------------------------------~~~~~~~~~~l~~li~~  265 (290)
T 1t4h_A          232 CQNAAQIYRRVTS-GVKP---------------------------------------------ASFDKVAIPEVKEIIEG  265 (290)
T ss_dssp             CSSHHHHHHHHTT-TCCC---------------------------------------------GGGGGCCCHHHHHHHHH
T ss_pred             cCcHHHHHHHHhc-cCCc---------------------------------------------cccCCCCCHHHHHHHHH
Confidence            6554433221110 0000                                             01122345668999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||+.||.+|||+.|+|+||||+++
T Consensus       266 ~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          266 CIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HccCChhhCCCHHHHhhCcccccC
Confidence            999999999999999999999875

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.5e-48  Score=360.37  Aligned_cols=257  Identities=24%  Similarity=0.392  Sum_probs=207.3

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +.++|++.+.||+|+||.||+|.+..+++.||||+++...  ...+.+.+|+.+++.+.|     +||+++++++...+.
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~   79 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-----ENVVKFYGHRREGNI   79 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCC-----TTBCCEEEEEEETTE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCC-----CCceeeeeEEEcCCE
Confidence            3568999999999999999999999999999999986433  334678889998888866     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+||+++.                 
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~-----------------  140 (276)
T 2yex_A           80 QYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE-----------------  140 (276)
T ss_dssp             EEEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-----------------
T ss_pred             EEEEEEecCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEcc-----------------
Confidence            99999999 889999987643  6999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                ++.++|+|||.+.....     ......||+.|+|||++.+..+ +.++|||||||++|+|++|..||..
T Consensus       141 ----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  210 (276)
T 2yex_A          141 ----------RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ  210 (276)
T ss_dssp             ----------TCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSC
T ss_pred             ----------CCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence                      44567777776654321     1234578999999999988765 6789999999999999999999986


Q ss_pred             CCcHH-HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          324 HENLE-HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       324 ~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ..... ....+......                                               ......+++.+.+||.
T Consensus       211 ~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~li~  243 (276)
T 2yex_A          211 PSDSCQEYSDWKEKKTY-----------------------------------------------LNPWKKIDSAPLALLH  243 (276)
T ss_dssp             SCTTSHHHHHHHTTCTT-----------------------------------------------STTGGGSCHHHHHHHH
T ss_pred             CchHHHHHHHhhhcccc-----------------------------------------------cCchhhcCHHHHHHHH
Confidence            55321 11111100000                                               0011245677899999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCccC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRDYYR  430 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~~~~  430 (432)
                      +||+.||++|||+.|+++||||++...+
T Consensus       244 ~~l~~~p~~Rps~~~il~~~~~~~~~~~  271 (276)
T 2yex_A          244 KILVENPSARITIPDIKKDRWYNKPLKK  271 (276)
T ss_dssp             HHSCSSTTTSCCHHHHTTCTTTTCCCC-
T ss_pred             HHCCCCchhCCCHHHHhcCccccChhhc
Confidence            9999999999999999999999986543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.2e-48  Score=367.60  Aligned_cols=283  Identities=20%  Similarity=0.320  Sum_probs=210.8

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ..+.++|++.+.||+|+||+||+|++..+++.||||+++...  ...+.+.+|+++++.++|     +||+++++++...
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~   79 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH-----KNIVKLFAIEEET   79 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCC-----TTBCCEEEEEECT
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC-----CCcceEEEEeecC
Confidence            345678999999999999999999999999999999997533  234567789999999876     9999999988765


Q ss_pred             C--eEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          169 N--HICIVFEML-GPSLYDFLRKNNY-RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       169 ~--~~~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      .  ..|+||||+ +++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||+...           
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~-----------  148 (319)
T 4euu_A           80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIG-----------  148 (319)
T ss_dssp             TTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEEC-----------
T ss_pred             CCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEecc-----------
Confidence            4  889999999 8999999986532 239999999999999999999999999999999999996321           


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHh--------CCCCCccchHHHHHHHHHHH
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVIL--------GLGWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~--------~~~~~~~sDiwSlGvil~el  314 (432)
                                  .+....+||+|||++......  .....||+.|+|||++.        +..++.++|||||||++|||
T Consensus       149 ------------~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el  216 (319)
T 4euu_A          149 ------------EDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA  216 (319)
T ss_dssp             ------------TTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHH
T ss_pred             ------------CCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHH
Confidence                        134556889999988764433  23457999999999997        56789999999999999999


Q ss_pred             HhCCCCCCCCCcH-HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccc
Q 047395          315 CSGEALFQTHENL-EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS  393 (432)
Q Consensus       315 ltg~~pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (432)
                      ++|..||...... .....+.......|...+......     ......|......                .......+
T Consensus       217 ~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~----------------~~~~~~~~  275 (319)
T 4euu_A          217 ATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKA-----ENGPIDWSGDMPV----------------SCSLSRGL  275 (319)
T ss_dssp             HHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECS-----TTCCEEEESSCCT----------------TCSSCHHH
T ss_pred             HhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcc-----cCCccccCccCCc----------------ccccchhH
Confidence            9999999754331 122222222222222111111110     0111111111000                00112345


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHhcCC
Q 047395          394 AGYLIDLLQGLLRYDPSSRLTAHDALKHP  422 (432)
Q Consensus       394 ~~~l~~li~~~L~~dP~~R~ta~elL~hp  422 (432)
                      +..+.+||.+||+.||++|||++|+|+||
T Consensus       276 ~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          276 QVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             HHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             HHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            66789999999999999999999999986

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=6e-48  Score=361.40  Aligned_cols=257  Identities=24%  Similarity=0.379  Sum_probs=204.1

Q ss_pred             ecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec----hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           88 ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        88 ~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      .+|+.+.++|++.+.||+|+||.||+|++..+++.||+|++..    .......+.+|+.++..++|     |||+++++
T Consensus         4 ~~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----p~iv~~~~   78 (294)
T 4eqm_A            4 MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH-----QNIVSMID   78 (294)
T ss_dssp             CCSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCB-----TTBCCEEE
T ss_pred             chhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCC-----CCCceEEE
Confidence            3577889999999999999999999999999999999999853    23344567889988888876     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ++...+.+|+||||+ |++|.+++....  ++++..++.++.||+.||.|||++||+||||||+|||++.          
T Consensus        79 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~----------  146 (294)
T 4eqm_A           79 VDEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS----------  146 (294)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT----------
T ss_pred             eeeeCCeEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC----------
Confidence            999999999999999 889999998765  6999999999999999999999999999999999999654          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~  318 (432)
                                       ++.+||+|||++......    ....+||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus       147 -----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~  209 (294)
T 4eqm_A          147 -----------------NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE  209 (294)
T ss_dssp             -----------------TSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             -----------------CCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence                             455777777776543322    23357899999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||.+.+..+......  ....+.                                          ........+++.+.
T Consensus       210 ~pf~~~~~~~~~~~~~--~~~~~~------------------------------------------~~~~~~~~~~~~l~  245 (294)
T 4eqm_A          210 PPFNGETAVSIAIKHI--QDSVPN------------------------------------------VTTDVRKDIPQSLS  245 (294)
T ss_dssp             CSSCSSCHHHHHHHHH--SSCCCC------------------------------------------HHHHSCTTSCHHHH
T ss_pred             CCCCCCChHHHHHHHh--hccCCC------------------------------------------cchhcccCCCHHHH
Confidence            9998876554332221  111110                                          01112345677799


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCC
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHP  422 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp  422 (432)
                      ++|.+||+.||++||+..+.+.+.
T Consensus       246 ~li~~~l~~dp~~R~~~~~~l~~~  269 (294)
T 4eqm_A          246 NVILRATEKDKANRYKTIQEMKDD  269 (294)
T ss_dssp             HHHHHHSCSSGGGSCSSHHHHHHH
T ss_pred             HHHHHHhcCCHhHccccHHHHHHH
Confidence            999999999999999544444443

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=3.8e-48  Score=361.48  Aligned_cols=262  Identities=31%  Similarity=0.510  Sum_probs=216.7

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ...+.++|++.+.||+|+||.||+|++..+++.||||++....   .....+.+|+.+++.++|     +||+++++++.
T Consensus        17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~   91 (287)
T 2wei_A           17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH-----PNIMKLFEILE   91 (287)
T ss_dssp             THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCC-----TTBCCEEEEEE
T ss_pred             HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccC-----CCccEEEEEEe
Confidence            3456789999999999999999999999999999999986432   234677889999988866     99999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      ..+..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.+            
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~------------  157 (287)
T 2wei_A           92 DSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK------------  157 (287)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS------------
T ss_pred             CCCeEEEEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecC------------
Confidence            999999999999 899999998764  69999999999999999999999999999999999998652            


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                  .....+||+|||++......  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+
T Consensus       158 ------------~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~  224 (287)
T 2wei_A          158 ------------EKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG  224 (287)
T ss_dssp             ------------STTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ------------CCcccEEEeccCcceeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCC
Confidence                        23456899999987654332  233468999999999876 489999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+..+....+.......+.                                             .....+++.+.+||.+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~li~~  259 (287)
T 2wei_A          225 KNEYDILKRVETGKYAFDL---------------------------------------------PQWRTISDDAKDLIRK  259 (287)
T ss_dssp             SSHHHHHHHHHHCCCCCCS---------------------------------------------GGGTTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCCc---------------------------------------------hhhhhcCHHHHHHHHH
Confidence            7766655544332211110                                             0113456778999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||+.||++|||+.|+|+||||++..
T Consensus       260 ~l~~dp~~Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          260 MLTFHPSLRITATQCLEHPWIQKYS  284 (287)
T ss_dssp             HTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred             HcccChhhCcCHHHHhcCHHHhccc
Confidence            9999999999999999999997643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=8.7e-49  Score=370.13  Aligned_cols=257  Identities=23%  Similarity=0.318  Sum_probs=203.9

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      ...+.++|++.+.||+|+||.||+|++..+++.||||+++...    .....+.+|+.++..+.|     +||+++++++
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~   81 (311)
T 3ork_A            7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH-----PAIVAVYDTG   81 (311)
T ss_dssp             CSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCC-----TTBCCEEEEE
T ss_pred             cceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCC-----CCcceEEEee
Confidence            3567889999999999999999999999999999999997532    233456778877777765     9999999988


Q ss_pred             ccCC----eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCC
Q 047395          166 DYRN----HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       166 ~~~~----~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      ....    ..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++      
T Consensus        82 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~------  153 (311)
T 3ork_A           82 EAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN------  153 (311)
T ss_dssp             EEEETTEEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTS------
T ss_pred             eccCCCCcccEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCC------
Confidence            6543    459999999 899999998765  699999999999999999999999999999999999976544      


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccC------CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHH
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ------EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~el  314 (432)
                                           .+||+|||++.....      .....+||+.|+|||++.+..++.++|||||||++|+|
T Consensus       154 ---------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  212 (311)
T 3ork_A          154 ---------------------AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV  212 (311)
T ss_dssp             ---------------------CEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             ---------------------CEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHH
Confidence                                 466666666554322      12235689999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          315 CSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       315 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      ++|..||.+.+..+....+.......+.                                             .....++
T Consensus       213 l~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~  247 (311)
T 3ork_A          213 LTGEPPFTGDSPVSVAYQHVREDPIPPS---------------------------------------------ARHEGLS  247 (311)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHCCCCCHH---------------------------------------------HHSTTCC
T ss_pred             HhCCCCCCCCChHHHHHHHhcCCCCCcc---------------------------------------------cccCCCC
Confidence            9999999887766554443322111110                                             1123467


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~hp~f~  425 (432)
                      ..+.+||.+||+.||++||++.+++.|+|++
T Consensus       248 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          248 ADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence            7799999999999999999999999999985

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=5.5e-48  Score=363.41  Aligned_cols=255  Identities=24%  Similarity=0.432  Sum_probs=205.2

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-----hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc--
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF--  165 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~--  165 (432)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|+++...     .....+.+|+.++..++|     +||+++++++  
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~   77 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH-----KNVIQLVDVLYN   77 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCC-----TTBCCEEEEEEC
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCC-----CCeeEEEEEEEc
Confidence            4578999999999999999999999999999999997542     234678889998888876     9999999988  


Q ss_pred             ccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          166 DYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       166 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      ...+..|+||||+.++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.+            
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~------------  145 (305)
T 2wtk_C           78 EEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTG------------  145 (305)
T ss_dssp             C---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT------------
T ss_pred             CCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCC------------
Confidence            45568999999996669999887655679999999999999999999999999999999999997554            


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCC--CCccchHHHHHHHHHHHHhCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLG--WSYPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGvil~elltg~  318 (432)
                                     +.++|+|||.+.....     ......||+.|+|||++.+..  ++.++|||||||++|+|++|.
T Consensus       146 ---------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~  210 (305)
T 2wtk_C          146 ---------------GTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL  210 (305)
T ss_dssp             ---------------CCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSS
T ss_pred             ---------------CcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCC
Confidence                           4566666666654321     112346899999999998754  377999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||.+.+..+....+.......                                                 ...+++.+.
T Consensus       211 ~p~~~~~~~~~~~~i~~~~~~~-------------------------------------------------~~~~~~~l~  241 (305)
T 2wtk_C          211 YPFEGDNIYKLFENIGKGSYAI-------------------------------------------------PGDCGPPLS  241 (305)
T ss_dssp             CSCCCSSHHHHHHHHHHCCCCC-------------------------------------------------CSSSCHHHH
T ss_pred             CCCCCchHHHHHHHHhcCCCCC-------------------------------------------------CCccCHHHH
Confidence            9998876655544443221111                                                 124566688


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +||.+||+.||++|||+.|+++||||++..
T Consensus       242 ~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  271 (305)
T 2wtk_C          242 DLLKGMLEYEPAKRFSIRQIRQHSWFRKKH  271 (305)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred             HHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence            999999999999999999999999997654

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.8e-48  Score=369.53  Aligned_cols=257  Identities=26%  Similarity=0.431  Sum_probs=204.3

Q ss_pred             cCceEEEeeeecccceEEEEEEec---CCCcEEEEEEeech-----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR---ETGETVAIKVVRSI-----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~---~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      .++|++.+.||+|+||+||+|++.   .+++.||||+++..     ....+.+.+|+.++..+.+    |+||+++++++
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~----h~~iv~~~~~~  128 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ----SPFLVTLHYAF  128 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHT----CTTBCCEEEEE
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccC----CCceeEEEEEE
Confidence            468999999999999999999984   57899999998642     2334567789999999963    39999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      ...+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.            
T Consensus       129 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~------------  194 (355)
T 1vzo_A          129 QTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS------------  194 (355)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT------------
T ss_pred             eeCceEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC------------
Confidence            9999999999999 899999998765  6999999999999999999999999999999999999654            


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccC----CccccccCCCcchhHHHhCC--CCCccchHHHHHHHHHHHHhCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ----EHNYIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvil~elltg~  318 (432)
                                     ++.+||+|||++.....    .....+||+.|+|||++.+.  .++.++|||||||++|+|++|.
T Consensus       195 ---------------~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~  259 (355)
T 1vzo_A          195 ---------------NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA  259 (355)
T ss_dssp             ---------------TSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSS
T ss_pred             ---------------CCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCC
Confidence                           45567777776654321    12335799999999999863  4789999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHH-HhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          319 ALFQTHENLEHLAMMER-VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      .||...........+.. .....                                              ...+..++..+
T Consensus       260 ~pf~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~  293 (355)
T 1vzo_A          260 SPFTVDGEKNSQAEISRRILKSE----------------------------------------------PPYPQEMSALA  293 (355)
T ss_dssp             CTTSCTTSCCCHHHHHHHHHHCC----------------------------------------------CCCCTTSCHHH
T ss_pred             CCCccCCccchHHHHHHHHhccC----------------------------------------------CCCCcccCHHH
Confidence            99975432211111111 00000                                              01123456668


Q ss_pred             HHHHHHccccCCCCCC-----CHHHHhcCCCCCCCcc
Q 047395          398 IDLLQGLLRYDPSSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      .+||.+||+.||.+||     |++|+++||||++..+
T Consensus       294 ~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~  330 (355)
T 1vzo_A          294 KDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW  330 (355)
T ss_dssp             HHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             HHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCCh
Confidence            8999999999999999     9999999999987544

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=8.1e-48  Score=359.54  Aligned_cols=256  Identities=23%  Similarity=0.387  Sum_probs=188.7

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhH--h-HHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE--A-AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~--~-~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ..++|++.+.||+|+||+||+|++..+++.||||+++.......  . ...+...++.+     .|+||+++++++...+
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~iv~~~~~~~~~~   79 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV-----DCPFTVTFYGALFREG   79 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSS
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhC-----CCCeEEEEeeeeeccC
Confidence            45789999999999999999999999999999999975322221  2 22222223333     4599999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          170 HICIVFEMLGPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       170 ~~~lv~e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ..|+||||++++|.+++...  ....+++..++.++.||+.||.|||++ ||+||||||+|||++.+             
T Consensus        80 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~-------------  146 (290)
T 3fme_A           80 DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINAL-------------  146 (290)
T ss_dssp             SEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTT-------------
T ss_pred             CEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCC-------------
Confidence            99999999988998888652  234699999999999999999999998 99999999999997544             


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHH----hCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~----~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                    +.+||+|||++......  .....||+.|+|||++    .+..++.++|||||||++|+|++|..|
T Consensus       147 --------------~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p  212 (290)
T 3fme_A          147 --------------GQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP  212 (290)
T ss_dssp             --------------CCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCS
T ss_pred             --------------CCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCC
Confidence                          45666666666543322  2234689999999997    455689999999999999999999999


Q ss_pred             CCCCCcH-HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          321 FQTHENL-EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       321 f~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      |...... .....+.....  +                    ..                         ....+++.+.+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~--~--------------------~~-------------------------~~~~~~~~~~~  245 (290)
T 3fme_A          213 YDSWGTPFQQLKQVVEEPS--P--------------------QL-------------------------PADKFSAEFVD  245 (290)
T ss_dssp             SCCCSCHHHHHHHHHHSCC--C--------------------CC-------------------------CTTTSCHHHHH
T ss_pred             ccccCchHHHHHHHhccCC--C--------------------Cc-------------------------ccccCCHHHHH
Confidence            9864332 22222111100  0                    00                         01245667899


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||.+||+.||++|||+.|+++||||+..
T Consensus       246 li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          246 FTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHHhhcChhhCcCHHHHHhCcccccC
Confidence            9999999999999999999999999753

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=5.1e-47  Score=355.55  Aligned_cols=259  Identities=21%  Similarity=0.279  Sum_probs=209.8

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ++.+.++|++.+.||+|+||.||+|++..+++.||||++... .....+.+|+.++..+.+    |++++.+++++....
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~e~~~~~~l~~----~~~i~~~~~~~~~~~   79 (298)
T 1csn_A            5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-SDAPQLRDEYRTYKLLAG----CTGIPNVYYFGQEGL   79 (298)
T ss_dssp             -CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-TTSCCHHHHHHHHHHTTT----CTTCCCEEEEEEETT
T ss_pred             CcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC-CccHHHHHHHHHHHHHhc----CCCCCeEEeecCCCc
Confidence            456788999999999999999999999999999999998643 234567889999998853    389999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          170 HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       170 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      ..++||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++               
T Consensus        80 ~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~---------------  143 (298)
T 1csn_A           80 HNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPN---------------  143 (298)
T ss_dssp             EEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSS---------------
T ss_pred             eeEEEEEecCCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCC---------------
Confidence            999999999999999998754 4699999999999999999999999999999999999987654               


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC----------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE----------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                             ......+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       144 -------~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  216 (298)
T 1csn_A          144 -------SKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSL  216 (298)
T ss_dssp             -------STTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             -------CCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCC
Confidence                   223455888888887654332          234579999999999999999999999999999999999999


Q ss_pred             CCCCCCc---HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          320 LFQTHEN---LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       320 pf~~~~~---~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      ||.+.+.   ......+.......+                                            .......+++.
T Consensus       217 pf~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~  252 (298)
T 1csn_A          217 PWQGLKAATNKQKYERIGEKKQSTP--------------------------------------------LRELCAGFPEE  252 (298)
T ss_dssp             TTSSCCSCCHHHHHHHHHHHHHHSC--------------------------------------------HHHHTTTSCHH
T ss_pred             CcchhhccccHHHHHHHHhhccCcc--------------------------------------------HHHHHhhCcHH
Confidence            9987543   222222222111111                                            01112356777


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhc
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      +.+||.+||+.||++|||++++++
T Consensus       253 l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          253 FYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhcCCcccCCCHHHHHH
Confidence            999999999999999999999874

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=3e-48  Score=370.29  Aligned_cols=264  Identities=28%  Similarity=0.488  Sum_probs=183.8

Q ss_pred             ceecCceEEEe-eeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHH-HHHHHhcCCCCCceeEeeccccc-
Q 047395           91 ENLTSRYKILR-KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDV-LELLKRYDRSGSRCVQIRNWFDY-  167 (432)
Q Consensus        91 ~~~~~~y~i~~-~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~-l~~l~~~~~~~~~iv~~~~~~~~-  167 (432)
                      ..+.++|++.+ .||+|+||+||+|++..+++.||||++.......    +|+.. +..+.     |+||+++++++.. 
T Consensus        24 ~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~e~~~~~~~~~-----h~~i~~~~~~~~~~   94 (336)
T 3fhr_A           24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR----QEVDHHWQASG-----GPHIVCILDVYENM   94 (336)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHH----HHHHHHHHHTT-----STTBCCEEEEEEEE
T ss_pred             ccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHH----HHHHHHHHhcC-----CCChHHHHHHHhhc
Confidence            35678899965 6999999999999999999999999997643322    33333 33333     4999999999875 


Q ss_pred             ---CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          168 ---RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       168 ---~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                         ...+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.+          
T Consensus        95 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~----------  164 (336)
T 3fhr_A           95 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK----------  164 (336)
T ss_dssp             ETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS----------
T ss_pred             cCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEec----------
Confidence               45689999999 8899999998765579999999999999999999999999999999999998642          


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                    +..+.+||+|||++...... ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       165 --------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (336)
T 3fhr_A          165 --------------EKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFY  230 (336)
T ss_dssp             --------------STTCCEEECCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             --------------CCCceEEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence                          23456899999988764433 344678999999999988889999999999999999999999997


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ..........+...                   +.......+                      ......+++.+.+||.
T Consensus       231 ~~~~~~~~~~~~~~-------------------~~~~~~~~~----------------------~~~~~~~~~~~~~li~  269 (336)
T 3fhr_A          231 SNTGQAISPGMKRR-------------------IRLGQYGFP----------------------NPEWSEVSEDAKQLIR  269 (336)
T ss_dssp             ---------------------------------------CCC----------------------TTTSTTCCHHHHHHHH
T ss_pred             CccchhhhhhHHHh-------------------hhccccccC----------------------chhhccCCHHHHHHHH
Confidence            65443221111000                   000000000                      0112356777999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +||+.||++|||+.|+|+||||++..
T Consensus       270 ~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          270 LLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             HHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             HHCCCChhHCcCHHHHhcCccccccc
Confidence            99999999999999999999998743

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.6e-47  Score=361.88  Aligned_cols=258  Identities=26%  Similarity=0.455  Sum_probs=205.2

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +...++|++.+.||+|+||.||+|.+..+|+.||||++.... ....+.+|+.++..+.|     +||+++++++...+.
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~   98 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDS-----PHVVKYYGSYFKNTD   98 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCC-----TTBCCEEEEEEETTE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCC-----CCCccEEEEEEeCCE
Confidence            445678999999999999999999999999999999997533 34567889999888866     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.                 
T Consensus        99 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~-----------------  160 (314)
T 3com_A           99 LWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT-----------------  160 (314)
T ss_dssp             EEEEEECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-----------------
T ss_pred             EEEEeecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECC-----------------
Confidence            99999999 789999997543 46999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                ++.++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus       161 ----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  230 (314)
T 3com_A          161 ----------EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP  230 (314)
T ss_dssp             ----------TCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             ----------CCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh
Confidence                      445777777776543322   2345789999999999998999999999999999999999999987665


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      ......+.....+.                      +                        .....++..+.+||.+||+
T Consensus       231 ~~~~~~~~~~~~~~----------------------~------------------------~~~~~~~~~l~~li~~~l~  264 (314)
T 3com_A          231 MRAIFMIPTNPPPT----------------------F------------------------RKPELWSDNFTDFVKQCLV  264 (314)
T ss_dssp             HHHHHHHHHSCCCC----------------------C------------------------SSGGGSCHHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCcc----------------------c------------------------CCcccCCHHHHHHHHHHcc
Confidence            44433222111000                      0                        0112346678999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCc
Q 047395          407 YDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .||.+|||+.++|+||||++..
T Consensus       265 ~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          265 KSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             SCTTTSCCHHHHTTSHHHHTCC
T ss_pred             CChhhCcCHHHHHhCHHHhcCC
Confidence            9999999999999999998754

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2e-47  Score=369.23  Aligned_cols=249  Identities=18%  Similarity=0.308  Sum_probs=201.3

Q ss_pred             ecCceEEEeeeecccceEEEEEEec-------CCCcEEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEee
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDR-------ETGETVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIR  162 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~-------~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~  162 (432)
                      ..++|++.+.||+|+||.||+|++.       .++..||||+++..  ......+.+|+.+++.+ +|     +||++++
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----pnIv~~~  153 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-----KNIINLL  153 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCC-----TTBCCEE
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCC-----CCEeeEE
Confidence            3578999999999999999999875       34568999999753  33456788999999998 55     9999999


Q ss_pred             cccccCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCc
Q 047395          163 NWFDYRNHICIVFEML-GPSLYDFLRKNNY--------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPEN  227 (432)
Q Consensus       163 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  227 (432)
                      +++...+.+|+||||+ +++|.+++.....              ..+++..++.++.||+.||.|||++||+||||||+|
T Consensus       154 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  233 (370)
T 2psq_A          154 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  233 (370)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             EEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhh
Confidence            9999999999999999 8999999987531              348899999999999999999999999999999999


Q ss_pred             EEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccc
Q 047395          228 ILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPC  302 (432)
Q Consensus       228 Ili~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~s  302 (432)
                      ||++.                           ++.+||+|||++......     .....+|+.|+|||++.+..++.++
T Consensus       234 Ill~~---------------------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  286 (370)
T 2psq_A          234 VLVTE---------------------------NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS  286 (370)
T ss_dssp             EEECT---------------------------TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHH
T ss_pred             EEECC---------------------------CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHH
Confidence            99654                           445677777766543321     1224567899999999999999999


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCch
Q 047395          303 DMWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR  381 (432)
Q Consensus       303 DiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (432)
                      |||||||++|||++ |..||.+.+..+....+.....                                           
T Consensus       287 DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-------------------------------------------  323 (370)
T 2psq_A          287 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR-------------------------------------------  323 (370)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC-------------------------------------------
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC-------------------------------------------
Confidence            99999999999999 9999987665554433322110                                           


Q ss_pred             hhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       382 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                           ...+..++..+.+||.+||+.||++|||+.|++++
T Consensus       324 -----~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          324 -----MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 00112456678999999999999999999999863

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=6.9e-48  Score=365.43  Aligned_cols=259  Identities=26%  Similarity=0.395  Sum_probs=208.8

Q ss_pred             ceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh-------hhHhHHHHHHHHHHHHhcCCCCCc
Q 047395           85 YLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLKRYDRSGSR  157 (432)
Q Consensus        85 ~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~  157 (432)
                      .+...++.+.++|++.+.||+|+||.||+|++..+++.||||+++....       ....+.+|+.+++.+.+   .|+|
T Consensus        33 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~~~  109 (320)
T 3a99_A           33 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---GFSG  109 (320)
T ss_dssp             -------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS---SSCS
T ss_pred             CcccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhcc---CCCC
Confidence            3445667788999999999999999999999999999999999975432       23567789999998865   4599


Q ss_pred             eeEeecccccCCeEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCc
Q 047395          158 CVQIRNWFDYRNHICIVFEML-G-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEY  235 (432)
Q Consensus       158 iv~~~~~~~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~  235 (432)
                      |+++++++...+..++|||++ + ++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.   
T Consensus       110 i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~---  184 (320)
T 3a99_A          110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---  184 (320)
T ss_dssp             BCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET---
T ss_pred             ceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC---
Confidence            999999999999999999999 4 89999998764  6999999999999999999999999999999999999752   


Q ss_pred             cccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHH
Q 047395          236 LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIE  313 (432)
Q Consensus       236 ~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~e  313 (432)
                                             ..+.+||+|||++...... .....||+.|+|||++.+..+ +.++|||||||++|+
T Consensus       185 -----------------------~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~e  241 (320)
T 3a99_A          185 -----------------------NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD  241 (320)
T ss_dssp             -----------------------TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             -----------------------CCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHH
Confidence                                   2345777777777654332 234578999999999987765 688999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccc
Q 047395          314 LCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS  393 (432)
Q Consensus       314 lltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (432)
                      |++|..||.....      +..  +.                     ..                          ....+
T Consensus       242 l~~g~~pf~~~~~------~~~--~~---------------------~~--------------------------~~~~~  266 (320)
T 3a99_A          242 MVCGDIPFEHDEE------IIR--GQ---------------------VF--------------------------FRQRV  266 (320)
T ss_dssp             HHHSSCSCCSHHH------HHH--CC---------------------CC--------------------------CSSCC
T ss_pred             HHHCCCCCCChhh------hhc--cc---------------------cc--------------------------ccccC
Confidence            9999999964211      000  00                     00                          11245


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       394 ~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ++.+.+||.+||+.||++|||++|+++||||++...
T Consensus       267 ~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          267 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence            667899999999999999999999999999987653

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=3.1e-47  Score=358.07  Aligned_cols=252  Identities=29%  Similarity=0.446  Sum_probs=209.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ..++|++++.||+|+||.||+|++..+++.||||++....  ...+.+.+|+.++..+.|     +||+++++++...+.
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~   94 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-----PYVTKYYGSYLKDTK   94 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCC-----TTBCCEEEEEEETTE
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCC-----CCEeEEEEEEecCCe
Confidence            3567999999999999999999999999999999997432  345678889999988866     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .|+||||+ +++|.+++...   .+++..+..++.||+.||.|||++||+||||||+|||++.                 
T Consensus        95 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~-----------------  154 (303)
T 3a7i_A           95 LWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE-----------------  154 (303)
T ss_dssp             EEEEEECCTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-----------------
T ss_pred             EEEEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECC-----------------
Confidence            99999999 88999999753   5999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                ++.++|+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus       155 ----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  224 (303)
T 3a7i_A          155 ----------HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP  224 (303)
T ss_dssp             ----------TSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             ----------CCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH
Confidence                      456777777776553322   2345789999999999999999999999999999999999999987665


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      ......+.....  +                                              .....++..+.+||.+||+
T Consensus       225 ~~~~~~~~~~~~--~----------------------------------------------~~~~~~~~~l~~li~~~l~  256 (303)
T 3a7i_A          225 MKVLFLIPKNNP--P----------------------------------------------TLEGNYSKPLKEFVEACLN  256 (303)
T ss_dssp             HHHHHHHHHSCC--C----------------------------------------------CCCSSCCHHHHHHHHHHCC
T ss_pred             HHHHHHhhcCCC--C----------------------------------------------CCccccCHHHHHHHHHHcC
Confidence            554433322110  0                                              0112456678999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 047395          407 YDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .||++|||+.|+++||||.+.
T Consensus       257 ~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          257 KEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             SSGGGSCCHHHHTTCHHHHHH
T ss_pred             CChhhCcCHHHHhhChhhhcC
Confidence            999999999999999999653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=6.8e-47  Score=356.67  Aligned_cols=248  Identities=21%  Similarity=0.282  Sum_probs=196.4

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ...++|++.+.||+|+||+||+|++  +++.||||++...   ......+.+|+.++..++|     +||+++++++...
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~~~  106 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH-----PNIVLFMGAVTQP  106 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCC-----TTBCCEEEEECST
T ss_pred             CChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEEEC
Confidence            3457899999999999999999976  4889999998643   2334567889999999876     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC--cEeccCCCCcEEeecCCccccCCcccc
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNY-RPFPVDLVREIGRQLLECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      +.+++||||+ +++|.+++..... ..+++..++.++.||+.||+|||++|  |+||||||+|||++.            
T Consensus       107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~------------  174 (309)
T 3p86_A          107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK------------  174 (309)
T ss_dssp             TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECT------------
T ss_pred             CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeC------------
Confidence            9999999999 8999999986431 13899999999999999999999999  999999999999654            


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                     ++.+||+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       175 ---------------~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf  239 (309)
T 3p86_A          175 ---------------KYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW  239 (309)
T ss_dssp             ---------------TCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTT
T ss_pred             ---------------CCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                           456777777776543322   23457899999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ...+..+....+.......                                               ..+..+++.+.+||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~l~~li  272 (309)
T 3p86_A          240 GNLNPAQVVAAVGFKCKRL-----------------------------------------------EIPRNLNPQVAAII  272 (309)
T ss_dssp             TTSCHHHHHHHHHHSCCCC-----------------------------------------------CCCTTSCHHHHHHH
T ss_pred             CCCCHHHHHHHHHhcCCCC-----------------------------------------------CCCccCCHHHHHHH
Confidence            8877655544332211110                                               01234567789999


Q ss_pred             HHccccCCCCCCCHHHHhc
Q 047395          402 QGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~  420 (432)
                      .+||+.||.+|||+.|+++
T Consensus       273 ~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          273 EGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHccCChhhCcCHHHHHH
Confidence            9999999999999999986

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=8.1e-47  Score=359.65  Aligned_cols=255  Identities=23%  Similarity=0.262  Sum_probs=205.2

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHH-HhcCCCCCceeEeecccccCCe
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .+.++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|+.+++.+ .|     +||+++++++...+.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h-----~~i~~~~~~~~~~~~   79 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSG-----DGIPQVYYFGPCGKY   79 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSC-----TTSCCEEEEEEETTE
T ss_pred             EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCC-----CCCCEEEEEEecCCc
Confidence            34678999999999999999999999999999999986532 345688999999999 55     999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          171 ICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       171 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      .++||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.               
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~---------------  143 (330)
T 2izr_A           80 NAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGN---------------  143 (330)
T ss_dssp             EEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGG---------------
T ss_pred             cEEEEEeCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCC---------------
Confidence            99999999999999998753 46999999999999999999999999999999999999866442               


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC----------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE----------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                             .....+||+|||++......          ....+||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus       144 -------~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~P  216 (330)
T 2izr_A          144 -------KTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP  216 (330)
T ss_dssp             -------TCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             -------CCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCC
Confidence                   12234788888877653222          2346799999999999999999999999999999999999999


Q ss_pred             CCCCCcHH---HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          321 FQTHENLE---HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       321 f~~~~~~~---~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      |.+.+..+   ....+.......+..                                            .....++ .+
T Consensus       217 f~~~~~~~~~~~~~~i~~~~~~~~~~--------------------------------------------~~~~~~p-~~  251 (330)
T 2izr_A          217 WQGLKADTLKERYQKIGDTKRATPIE--------------------------------------------VLCENFP-EM  251 (330)
T ss_dssp             TTTCCCSSHHHHHHHHHHHHHHSCHH--------------------------------------------HHTTTCH-HH
T ss_pred             ccccccccHHHHHHHHHhhhccCCHH--------------------------------------------HHhccCh-HH
Confidence            98754332   222222211111110                                            0112234 68


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      .+||..||+.||.+||+++++++
T Consensus       252 ~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          252 ATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCHHHHHH
Confidence            99999999999999999998875

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.8e-47  Score=359.22  Aligned_cols=273  Identities=23%  Similarity=0.341  Sum_probs=196.8

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc-----
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY-----  167 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~-----  167 (432)
                      +.++|++.+.||+|+||.||+|++..+++.||||+++........+.+|+.++..++|     +||+++++++..     
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~~~   78 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH-----QYVVRYYAAWLERRNFV   78 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEEEECCCCC
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCc-----hHHHHHHHHHHhhcchh
Confidence            4578999999999999999999999999999999998766666788899999988876     999999987643     


Q ss_pred             --------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcccc
Q 047395          168 --------RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI  238 (432)
Q Consensus       168 --------~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~  238 (432)
                              .+..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+|+
T Consensus        79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl  157 (303)
T 1zy4_A           79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKI  157 (303)
T ss_dssp             C------CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             hhhcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEE
Confidence                    46789999999 889999998754 45788999999999999999999999999999999999876665555


Q ss_pred             CCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhC
Q 047395          239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       239 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg  317 (432)
                      +|||++..........         . .+-..............||+.|+|||++.+. .++.++|||||||++|+|++ 
T Consensus       158 ~dfg~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-  226 (303)
T 1zy4_A          158 GDFGLAKNVHRSLDIL---------K-LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-  226 (303)
T ss_dssp             CCCCCCSCTTC-----------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-
T ss_pred             eeCcchhhcccccchh---------c-cccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-
Confidence            5555543221110000         0 0000000001112345789999999999875 68999999999999999998 


Q ss_pred             CCCCCCCCc-HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          318 EALFQTHEN-LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       318 ~~pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                        ||..... .+....+.......                       |.                      ......+..
T Consensus       227 --p~~~~~~~~~~~~~~~~~~~~~-----------------------~~----------------------~~~~~~~~~  259 (303)
T 1zy4_A          227 --PFSTGMERVNILKKLRSVSIEF-----------------------PP----------------------DFDDNKMKV  259 (303)
T ss_dssp             --CCSSHHHHHHHHHHHHSTTCCC-----------------------CT----------------------TCCTTTSHH
T ss_pred             --ccCCchhHHHHHHhcccccccc-----------------------Cc----------------------cccccchHH
Confidence              5543221 12222111111111                       10                      011244566


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      +.+||.+||+.||.+|||+.|+++||||+....
T Consensus       260 ~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (303)
T 1zy4_A          260 EKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ  292 (303)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCCH
T ss_pred             HHHHHHHHHhcCcccCcCHHHHhCCCCcCCCCh
Confidence            889999999999999999999999999987543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=9.9e-48  Score=368.56  Aligned_cols=279  Identities=21%  Similarity=0.369  Sum_probs=215.2

Q ss_pred             eecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhh------------------HhHHHHHHHHHHH
Q 047395           87 FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR------------------EAAMTEIDVLELL  148 (432)
Q Consensus        87 ~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~------------------~~~~~E~~~l~~l  148 (432)
                      +..++...++|++.+.||+|+||.||+|.+  +++.||||++.......                  +.+.+|+.++..+
T Consensus        23 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  100 (348)
T 2pml_X           23 VKEKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI  100 (348)
T ss_dssp             ESSSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC
T ss_pred             hhhcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC
Confidence            344566678999999999999999999998  89999999997543221                  6788999999888


Q ss_pred             HhcCCCCCceeEeecccccCCeEEEEEccC-CCCHHHH------HHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEe
Q 047395          149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDF------LRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIH  220 (432)
Q Consensus       149 ~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~------l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivH  220 (432)
                      +|     +||+++++++...+..|+||||+ +++|.++      +.......+++..++.++.||+.||.|||+ +||+|
T Consensus       101 ~h-----~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H  175 (348)
T 2pml_X          101 KN-----EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICH  175 (348)
T ss_dssp             CC-----TTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEEC
T ss_pred             CC-----CCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEee
Confidence            76     99999999999999999999999 8899998      665434579999999999999999999999 99999


Q ss_pred             ccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhCC-CC
Q 047395          221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILGL-GW  298 (432)
Q Consensus       221 rDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~-~~  298 (432)
                      |||||+|||++.                           ++.++|+|||.+..... ......||+.|+|||++.+. .+
T Consensus       176 ~dl~p~Nil~~~---------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  228 (348)
T 2pml_X          176 RDVKPSNILMDK---------------------------NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSY  228 (348)
T ss_dssp             CCCCGGGEEECT---------------------------TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCE
T ss_pred             cCCChHhEEEcC---------------------------CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCC
Confidence            999999999654                           45677777777765332 23445789999999999887 56


Q ss_pred             Cc-cchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHh
Q 047395          299 SY-PCDMWSVGCILIELCSGEALFQTHEN-LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV  376 (432)
Q Consensus       299 ~~-~sDiwSlGvil~elltg~~pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (432)
                      +. ++|||||||++|+|++|..||..... .+....+.......|...        .        .+....         
T Consensus       229 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~--------~--------~~~~~~---------  283 (348)
T 2pml_X          229 NGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDR--------N--------HFLYPL---------  283 (348)
T ss_dssp             EHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSS--------S--------SSTTTT---------
T ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccch--------h--------hhhccc---------
Confidence            66 99999999999999999999988766 444443322211111100        0        000000         


Q ss_pred             hcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                           ...........++..+.+||.+||+.||.+|||+.|+|+||||++...
T Consensus       284 -----~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~  331 (348)
T 2pml_X          284 -----TNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNI  331 (348)
T ss_dssp             -----CC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCH
T ss_pred             -----cccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCH
Confidence                 000001112456788999999999999999999999999999998654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-47  Score=369.54  Aligned_cols=257  Identities=18%  Similarity=0.268  Sum_probs=209.2

Q ss_pred             ceecCceEEEeeeecccceEEEEEE-----ecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCL-----DRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~-----~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      +...++|++.+.||+|+||+||+|+     +..+++.||||+++..  ......+.+|+.++..++|     +||+++++
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----pnIv~~~~  141 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH-----QNIVRCIG  141 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCC-----TTBCCEEE
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCC-----CCCCeEEE
Confidence            3446789999999999999999999     4456789999998642  3444567889999998876     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccc
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNY-----RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLK  237 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  237 (432)
                      ++......|+||||+ +++|.+++.....     ..+++..++.++.||+.||.|||++||+||||||+|||++.+|   
T Consensus       142 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~---  218 (367)
T 3l9p_A          142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG---  218 (367)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS---
T ss_pred             EEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCC---
Confidence            999999999999999 8999999987532     3589999999999999999999999999999999999986532   


Q ss_pred             cCCcccccCCCCCccccccCCCCCCeEEeecCCccccc-----CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHH
Q 047395          238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH-----QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI  312 (432)
Q Consensus       238 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~  312 (432)
                                           ....+||+|||+++...     .......||+.|+|||++.+..++.++|||||||++|
T Consensus       219 ---------------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~  277 (367)
T 3l9p_A          219 ---------------------PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW  277 (367)
T ss_dssp             ---------------------TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             ---------------------CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHH
Confidence                                 34468889998876421     2223356799999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcc
Q 047395          313 ELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD  391 (432)
Q Consensus       313 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (432)
                      ||++ |..||.+.+..+....+.......                                                ...
T Consensus       278 ellt~g~~pf~~~~~~~~~~~i~~~~~~~------------------------------------------------~~~  309 (367)
T 3l9p_A          278 EIFSLGYMPYPSKSNQEVLEFVTSGGRMD------------------------------------------------PPK  309 (367)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHTTCCCC------------------------------------------------CCT
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCCC------------------------------------------------CCc
Confidence            9998 999998877766555443321110                                                012


Q ss_pred             cchHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      .++..+.+||.+||+.||++|||+.++++|.|+
T Consensus       310 ~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          310 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            456668899999999999999999999988654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=7e-48  Score=362.18  Aligned_cols=267  Identities=24%  Similarity=0.370  Sum_probs=185.8

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ..++|++.+.||+|+||.||+|.+..+++.||||++...  ......+.+|+.++..++|     +||+++++++...+.
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~   87 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH-----PNIVSYYTSFVVKDE   87 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCC-----TTBCCEEEEEESSSC
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCC-----CCEeeEEEEEeecCC
Confidence            357899999999999999999999999999999998643  2334556778877777655     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          171 ICIVFEML-GPSLYDFLRKN------NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~------~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                      .++||||+ +++|.+++...      ....+++..++.++.||+.||.|||++||+||||||+|||++.++.        
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--------  159 (303)
T 2vwi_A           88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS--------  159 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCC--------
T ss_pred             cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCC--------
Confidence            99999999 89999999751      2245899999999999999999999999999999999999765554        


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccC--------CccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHH
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--------EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~el  314 (432)
                                         ++|+|||++.....        ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus       160 -------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l  220 (303)
T 2vwi_A          160 -------------------VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL  220 (303)
T ss_dssp             -------------------EEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHH
T ss_pred             -------------------EEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHH
Confidence                               55555554432211        1233578999999999976 4689999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          315 CSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       315 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      ++|..||...............  ..+.                    .+.                 ..........++
T Consensus       221 ~~g~~pf~~~~~~~~~~~~~~~--~~~~--------------------~~~-----------------~~~~~~~~~~~~  261 (303)
T 2vwi_A          221 ATGAAPYHKYPPMKVLMLTLQN--DPPS--------------------LET-----------------GVQDKEMLKKYG  261 (303)
T ss_dssp             HHSSCTTTTSCGGGHHHHHHTS--SCCC--------------------TTC----------------------CCCCCCC
T ss_pred             HhCCCCCccCchhhHHHHHhcc--CCCc--------------------ccc-----------------ccccchhhhhhh
Confidence            9999999876654433221111  0000                    000                 000011123566


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCccC
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYR  430 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~~  430 (432)
                      ..+.+||.+||+.||.+|||+.|+++||||++...+
T Consensus       262 ~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  297 (303)
T 2vwi_A          262 KSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNK  297 (303)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHHTSTTC------
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCCC
Confidence            779999999999999999999999999999876544

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=6.3e-47  Score=351.57  Aligned_cols=254  Identities=21%  Similarity=0.365  Sum_probs=207.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc--ccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF--DYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~--~~~  168 (432)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++...   ....+.+.+|+.+++.++|     +||+++++++  ...
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~   79 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH-----PNIVRYYDRIIDRTN   79 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCC-----TTBCCEEEEEEEGGG
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCC-----CCCCeEEEEEecCCC
Confidence            46899999999999999999999999999999999743   3345678889999999876     9999999977  446


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC-----cEeccCCCCcEEeecCCccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNN--YRPFPVDLVREIGRQLLECVAFMHDLR-----LIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      +.+|+||||+ +++|.+++....  ...+++..++.++.||+.||.|||++|     |+||||||+|||++.        
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~--------  151 (279)
T 2w5a_A           80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG--------  151 (279)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECS--------
T ss_pred             ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcC--------
Confidence            7899999999 889999998642  235999999999999999999999999     999999999999654        


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhC
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg  317 (432)
                                         ++.+||+|||.+.......   ....||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       152 -------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  212 (279)
T 2w5a_A          152 -------------------KQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCAL  212 (279)
T ss_dssp             -------------------SSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHS
T ss_pred             -------------------CCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHC
Confidence                               4567778887766543322   234689999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ..||...+..+....+.....+                                                .....++..+
T Consensus       213 ~~p~~~~~~~~~~~~i~~~~~~------------------------------------------------~~~~~~~~~l  244 (279)
T 2w5a_A          213 MPPFTAFSQKELAGKIREGKFR------------------------------------------------RIPYRYSDEL  244 (279)
T ss_dssp             SCSSCCSSHHHHHHHHHHTCCC------------------------------------------------CCCTTSCHHH
T ss_pred             CCCCcccCHHHHHHHHhhcccc------------------------------------------------cCCcccCHHH
Confidence            9999887765554444332110                                                0012356678


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .+||.+||+.||++|||+.|+|+|+|+.+.
T Consensus       245 ~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          245 NEIITRMLNLKDYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred             HHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence            999999999999999999999999999864

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=7.1e-47  Score=349.43  Aligned_cols=246  Identities=24%  Similarity=0.353  Sum_probs=205.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .++|++.+.||+|+||.||+|.+. +++.||+|++.......+.+.+|+.++..++|     +||+++++++...+..|+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~~~l   82 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKLVQLYGVCLEQAPICL   82 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCC-----TTBCCEEEEECSSSSEEE
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCCC-----CCEeeEEEEEecCCceEE
Confidence            468999999999999999999986 47789999998766566778999999999876     999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.                    
T Consensus        83 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~--------------------  141 (269)
T 4hcu_A           83 VFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE--------------------  141 (269)
T ss_dssp             EEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG--------------------
T ss_pred             EEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcC--------------------
Confidence            99999 899999997654 46999999999999999999999999999999999999654                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                             ++.++|+|||++......    .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+..
T Consensus       142 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~  214 (269)
T 4hcu_A          142 -------NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS  214 (269)
T ss_dssp             -------GGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             -------CCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH
Confidence                   456777777777643322    223456778999999999999999999999999999999 99999887766


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+.......                                                .+...++.+.+||.+||+.
T Consensus       215 ~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~li~~~l~~  246 (269)
T 4hcu_A          215 EVVEDISTGFRLY------------------------------------------------KPRLASTHVYQIMNHCWRE  246 (269)
T ss_dssp             HHHHHHHTTCCCC------------------------------------------------CCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhcCccCC------------------------------------------------CCCcCCHHHHHHHHHHccC
Confidence            6554443221110                                                0123456688999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 047395          408 DPSSRLTAHDALKH  421 (432)
Q Consensus       408 dP~~R~ta~elL~h  421 (432)
                      ||++|||+.|+++|
T Consensus       247 ~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          247 RPEDRPAFSRLLRQ  260 (269)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999999875

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.8e-46  Score=354.00  Aligned_cols=265  Identities=16%  Similarity=0.212  Sum_probs=198.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec-hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS-IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .++|++.+.||+|+||+||+|.+..+++.||+|++.. .......+.+|+.++..++|     +||+++++++..++..+
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~~~~~~~   83 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH-----PNVLKFIGVLYKDKRLN   83 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEEEETTEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC-----cCcccEEEEEecCCeeE
Confidence            4689999999999999999999999999999998854 34556678899999988876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        84 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  162 (310)
T 3s95_A           84 FITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK  162 (310)
T ss_dssp             EEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred             EEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence            999999 899999998754 469999999999999999999999999999999999997665555555554443211100


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA  331 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~  331 (432)
                      ....          ..-.............+||+.|+|||++.+..++.++|||||||++|+|++|..||......... 
T Consensus       163 ~~~~----------~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-  231 (310)
T 3s95_A          163 TQPE----------GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD-  231 (310)
T ss_dssp             ---------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT-
T ss_pred             cccc----------ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH-
Confidence            0000          00000000001112457999999999999999999999999999999999999998643211000 


Q ss_pred             HHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCC
Q 047395          332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSS  411 (432)
Q Consensus       332 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  411 (432)
                                                        ....           ............+++.+.+||.+||+.||++
T Consensus       232 ----------------------------------~~~~-----------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  266 (310)
T 3s95_A          232 ----------------------------------FGLN-----------VRGFLDRYCPPNCPPSFFPITVRCCDLDPEK  266 (310)
T ss_dssp             ----------------------------------SSBC-----------HHHHHHHTCCTTCCTTHHHHHHHHTCSSGGG
T ss_pred             ----------------------------------Hhhh-----------hhccccccCCCCCCHHHHHHHHHHccCChhh
Confidence                                              0000           0000111123456667899999999999999


Q ss_pred             CCCHHHHhc
Q 047395          412 RLTAHDALK  420 (432)
Q Consensus       412 R~ta~elL~  420 (432)
                      |||+.++++
T Consensus       267 Rps~~~l~~  275 (310)
T 3s95_A          267 RPSFVKLEH  275 (310)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999985

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=2.3e-46  Score=353.81  Aligned_cols=262  Identities=27%  Similarity=0.408  Sum_probs=203.4

Q ss_pred             eecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           87 FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        87 ~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      +.......++|++.+.||+|+||.||+|.+. +++.||||++...   ....+.+.+|+.++..+.+   .++||+++++
T Consensus        20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~~~iv~~~~   95 (313)
T 3cek_A           20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---HSDKIIRLYD   95 (313)
T ss_dssp             CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGG---GCTTBCCEEE
T ss_pred             eeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccc---cCCceEEEEE
Confidence            3444455678999999999999999999985 5899999998642   3345678899999999975   3489999999


Q ss_pred             ccccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          164 WFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                      ++...+..|+|||+.+++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+++           
T Consensus        96 ~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-----------  162 (313)
T 3cek_A           96 YEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-----------  162 (313)
T ss_dssp             EEECSSEEEEEECCCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-----------
T ss_pred             EeecCCEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-----------
Confidence            999999999999977999999998764  6999999999999999999999999999999999999742           


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhC-----------CCCCccchHHHH
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILG-----------LGWSYPCDMWSV  307 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~-----------~~~~~~sDiwSl  307 (432)
                                       +.+||+|||++......     .....||+.|+|||++.+           ..++.++|||||
T Consensus       163 -----------------~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~sl  225 (313)
T 3cek_A          163 -----------------GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL  225 (313)
T ss_dssp             -----------------TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHH
T ss_pred             -----------------CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHH
Confidence                             35677777776543322     123468999999999976           468889999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhh
Q 047395          308 GCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM  387 (432)
Q Consensus       308 Gvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (432)
                      ||++|+|++|..||........  .+.......                  ....                         
T Consensus       226 G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~------------------~~~~-------------------------  260 (313)
T 3cek_A          226 GCILYYMTYGKTPFQQIINQIS--KLHAIIDPN------------------HEIE-------------------------  260 (313)
T ss_dssp             HHHHHHHHHSSCTTTTCCSHHH--HHHHHHCTT------------------SCCC-------------------------
T ss_pred             HHHHHHHHhCCCchhhHHHHHH--HHHHHHhcc------------------cccC-------------------------
Confidence            9999999999999976543211  111111000                  0000                         


Q ss_pred             hhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       388 ~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                       .....+..+.+||.+||+.||++|||+.|+|+||||+...
T Consensus       261 -~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          261 -FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             -CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             -CcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence             1123355688999999999999999999999999998653

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.1e-46  Score=351.88  Aligned_cols=254  Identities=22%  Similarity=0.333  Sum_probs=205.0

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCC-------cEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETG-------ETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~-------~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      ...++|++.+.||+|+||+||+|++..++       ..||+|++.... ...+.+.+|+.++..++|     +||+++++
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~   79 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH-----KHLVLNYG   79 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCC-----TTBCCEEE
T ss_pred             echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCC-----CCEeEEEE
Confidence            34678999999999999999999998877       479999986433 445678889999998876     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ++...+..++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++..++.+++
T Consensus        80 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~  158 (289)
T 4fvq_A           80 VCVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPP  158 (289)
T ss_dssp             EECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred             EEEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccc
Confidence            999999999999999 899999998764 349999999999999999999999999999999999999887766554443


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCC-CC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGE-AL  320 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~-~p  320 (432)
                                         .+||+|||.+...... ....||+.|+|||++.+ ..++.++|||||||++|+|++|. +|
T Consensus       159 -------------------~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~  218 (289)
T 4fvq_A          159 -------------------FIKLSDPGISITVLPK-DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP  218 (289)
T ss_dssp             -------------------EEEECCCCSCTTTSCH-HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             -------------------eeeeccCcccccccCc-cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence                               4899999988654332 33568999999999988 67899999999999999999954 55


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...+..... .+.......|                                                 ...+..+.+|
T Consensus       219 ~~~~~~~~~~-~~~~~~~~~~-------------------------------------------------~~~~~~l~~l  248 (289)
T 4fvq_A          219 LSALDSQRKL-QFYEDRHQLP-------------------------------------------------APKAAELANL  248 (289)
T ss_dssp             TTTSCHHHHH-HHHHTTCCCC-------------------------------------------------CCSSCTTHHH
T ss_pred             ccccchHHHH-HHhhccCCCC-------------------------------------------------CCCCHHHHHH
Confidence            5444333222 2211111111                                                 1223447899


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 047395          401 LQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~h  421 (432)
                      |.+||+.||++|||+.|+++|
T Consensus       249 i~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          249 INNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHHH
Confidence            999999999999999999975

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.8e-46  Score=346.46  Aligned_cols=247  Identities=21%  Similarity=0.296  Sum_probs=203.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ..++|++.+.||+|+||.||+|.+. ++..||+|+++......+.+.+|+.++..++|     +||+++++++...+..+
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~~~   79 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSH-----PKLVKFYGVCSKEYPIY   79 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCC-----TTBCCEEEEECSSSSEE
T ss_pred             chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCCC-----CCEeeEEEEEccCCceE
Confidence            3578999999999999999999876 56789999998766666778999999999876     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.                   
T Consensus        80 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~-------------------  139 (268)
T 3sxs_A           80 IVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDR-------------------  139 (268)
T ss_dssp             EEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECT-------------------
T ss_pred             EEEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECC-------------------
Confidence            999999 899999998764 35999999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCc
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHEN  326 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~  326 (432)
                              ++.++|+|||.+.......    ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus       140 --------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~  211 (268)
T 3sxs_A          140 --------DLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN  211 (268)
T ss_dssp             --------TCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred             --------CCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh
Confidence                    4456777777665433221    22345678999999999889999999999999999999 9999988776


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+....+.......                                                .+...++.+.+||.+||+
T Consensus       212 ~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~l~~li~~~l~  243 (268)
T 3sxs_A          212 SEVVLKVSQGHRLY------------------------------------------------RPHLASDTIYQIMYSCWH  243 (268)
T ss_dssp             HHHHHHHHTTCCCC------------------------------------------------CCTTSCHHHHHHHHHTTC
T ss_pred             HHHHHHHHcCCCCC------------------------------------------------CCCcChHHHHHHHHHHcC
Confidence            65544432221110                                                012345668899999999


Q ss_pred             cCCCCCCCHHHHhcC
Q 047395          407 YDPSSRLTAHDALKH  421 (432)
Q Consensus       407 ~dP~~R~ta~elL~h  421 (432)
                      .||++|||+.|++++
T Consensus       244 ~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          244 ELPEKRPTFQQLLSS  258 (268)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999999975

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.8e-46  Score=356.40  Aligned_cols=248  Identities=23%  Similarity=0.289  Sum_probs=201.7

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCc---EEEEEEeec--hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~---~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ...++|++.+.||+|+||+||+|++..+++   .||||+++.  .......+.+|+.++..++|     +||+++++++.
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~  120 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH-----PNIIRLEGVVT  120 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEEC
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCC-----CCCCcEEEEEE
Confidence            346789999999999999999999986555   599999975  33445678899999988876     99999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      ..+..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.             
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~-------------  186 (325)
T 3kul_A          121 RGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS-------------  186 (325)
T ss_dssp             GGGCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-------------
T ss_pred             eCCccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECC-------------
Confidence            999999999999 899999997653 46999999999999999999999999999999999999654             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCCc------cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GE  318 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~  318 (432)
                                    ++.+||+|||++.......      ....+|+.|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       187 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~  252 (325)
T 3kul_A          187 --------------NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE  252 (325)
T ss_dssp             --------------TCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             --------------CCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCC
Confidence                          4556677777665433221      12245778999999998899999999999999999999 99


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||.+....+....+.......                                                ....+++.+.
T Consensus       253 ~p~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~l~  284 (325)
T 3kul_A          253 RPYWNMTNRDVISSVEEGYRLP------------------------------------------------APMGCPHALH  284 (325)
T ss_dssp             CTTTTSCHHHHHHHHHTTCCCC------------------------------------------------CCTTCCHHHH
T ss_pred             CCcccCCHHHHHHHHHcCCCCC------------------------------------------------CCCCcCHHHH
Confidence            9998877766555443321100                                                1124566789


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~  420 (432)
                      +||.+||+.||++|||+.|+++
T Consensus       285 ~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          285 QLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999885

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.8e-46  Score=350.15  Aligned_cols=251  Identities=20%  Similarity=0.319  Sum_probs=209.8

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .+...++|++.+.||+|+||.||+|.+..+++.||+|+++......+.+.+|+.+++.++|     +||+++++++...+
T Consensus         8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~   82 (288)
T 3kfa_A            8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQLLGVCTREP   82 (288)
T ss_dssp             TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCC-----TTBCCEEEEECSSS
T ss_pred             ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEccCC
Confidence            3445788999999999999999999999999999999998766667788899999999976     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ..|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.                
T Consensus        83 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~----------------  146 (288)
T 3kfa_A           83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----------------  146 (288)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECG----------------
T ss_pred             CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcC----------------
Confidence            999999999 899999999866567999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQT  323 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~  323 (432)
                                 ++.++|+|||.+.......    ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||..
T Consensus       147 -----------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~  215 (288)
T 3kfa_A          147 -----------NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG  215 (288)
T ss_dssp             -----------GGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             -----------CCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                       4456777777665433222    22356888999999999999999999999999999999 9999987


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+.......+.....                                                ......+++.+.+||.+
T Consensus       216 ~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~l~~li~~  247 (288)
T 3kfa_A          216 IDLSQVYELLEKDYR------------------------------------------------MERPEGCPEKVYELMRA  247 (288)
T ss_dssp             CCGGGHHHHHHTTCC------------------------------------------------CCCCTTCCHHHHHHHHH
T ss_pred             CCHHHHHHHHhccCC------------------------------------------------CCCCCCCCHHHHHHHHH
Confidence            665544433322110                                                01113456678999999


Q ss_pred             ccccCCCCCCCHHHHhc
Q 047395          404 LLRYDPSSRLTAHDALK  420 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~  420 (432)
                      ||+.||.+|||+.|+++
T Consensus       248 ~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          248 CWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HhCCChhhCcCHHHHHH
Confidence            99999999999999975

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.4e-45  Score=345.36  Aligned_cols=255  Identities=22%  Similarity=0.291  Sum_probs=200.2

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+|+.++..+.|.    +++..+..+....+..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~----~~i~~~~~~~~~~~~~   80 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGG----VGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTS----TTCCCEEEEEEETTEE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcC----CCCCccccccCCCCce
Confidence            46789999999999999999999999999999999986533 334688999999999872    3344444455677889


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      ++||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.                   
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~-------------------  140 (296)
T 3uzp_A           81 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL-------------------  140 (296)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECC-------------------
T ss_pred             EEEEEecCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEec-------------------
Confidence            9999999999999998544 46999999999999999999999999999999999999842                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC----------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE----------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                           .+..+.+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       141 -----~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  215 (296)
T 3uzp_A          141 -----GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW  215 (296)
T ss_dssp             -----GGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -----CCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence                 123456777777777653322          23457999999999999999999999999999999999999999


Q ss_pred             CCCCcH---HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          322 QTHENL---EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       322 ~~~~~~---~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .+.+..   .....+.......+                                            .......+++.+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~l~  251 (296)
T 3uzp_A          216 QGLKAATKRQKYERISEKKMSTP--------------------------------------------IEVLCKGYPSEFA  251 (296)
T ss_dssp             SSCCCSSSSSHHHHHHHHHHHSC--------------------------------------------HHHHTTTSCHHHH
T ss_pred             CCcCchhhhhhhhhhcccccCCc--------------------------------------------hHHHHhhCCHHHH
Confidence            864321   12222211111011                                            0111235677799


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~  420 (432)
                      +||.+||+.||++|||+.++++
T Consensus       252 ~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          252 TYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcCcCcCCCHHHHHH
Confidence            9999999999999999999875

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=2.2e-46  Score=348.71  Aligned_cols=246  Identities=21%  Similarity=0.322  Sum_probs=201.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .++|++++.||+|+||.||+|.+. ++..||||+++......+.+.+|+.++..+.|     +||+++++++...+..|+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~~~l   96 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH-----EKLVQLYGVCTKQRPIFI   96 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCC-----TTBCCEEEEECSSSSEEE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCC-----CCEeeEEEEEecCCCeEE
Confidence            578999999999999999999876 57789999998765566778899999998876     999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.                    
T Consensus        97 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~--------------------  155 (283)
T 3gen_A           97 ITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVND--------------------  155 (283)
T ss_dssp             EECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECT--------------------
T ss_pred             EEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcC--------------------
Confidence            99999 999999998743 35999999999999999999999999999999999999654                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                             ++.++|+|||++......    .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+..
T Consensus       156 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~  228 (283)
T 3gen_A          156 -------QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS  228 (283)
T ss_dssp             -------TSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             -------CCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh
Confidence                   456777777776543322    222356788999999998899999999999999999998 99999887766


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+........                                                ....++.+.+||.+||+.
T Consensus       229 ~~~~~~~~~~~~~~------------------------------------------------~~~~~~~l~~li~~~l~~  260 (283)
T 3gen_A          229 ETAEHIAQGLRLYR------------------------------------------------PHLASEKVYTIMYSCWHE  260 (283)
T ss_dssp             HHHHHHHTTCCCCC------------------------------------------------CTTCCHHHHHHHHHTTCS
T ss_pred             HHHHHHhcccCCCC------------------------------------------------CCcCCHHHHHHHHHHccC
Confidence            65554433221110                                                123456688999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 047395          408 DPSSRLTAHDALKH  421 (432)
Q Consensus       408 dP~~R~ta~elL~h  421 (432)
                      ||++|||+.|+++|
T Consensus       261 ~p~~Rps~~~ll~~  274 (283)
T 3gen_A          261 KADERPTFKILLSN  274 (283)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhHCcCHHHHHHH
Confidence            99999999999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=2.9e-46  Score=349.87  Aligned_cols=256  Identities=24%  Similarity=0.332  Sum_probs=200.3

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      |.....||+|+||.||+|.+..+++.||||++... ....+.+.+|+.++..+.|     +||+++++++...+..++||
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~~~~~~lv~   98 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH-----KNIVQYLGSFSENGFIKIFM   98 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCC-----TTBCCEEEEEEETTEEEEEE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCC-----CCEeeEeeEEEeCCcEEEEE
Confidence            44455899999999999999999999999998753 2345668889999988876     99999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          176 EML-GPSLYDFLRKNNY-RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      ||+ +++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||++.                     
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~---------------------  157 (295)
T 2clq_A           99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT---------------------  157 (295)
T ss_dssp             ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET---------------------
T ss_pred             EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC---------------------
Confidence            999 8999999987532 24678999999999999999999999999999999999754                     


Q ss_pred             cccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCC--CCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLG--WSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~--~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                           .++.++|+|||++......   .....||+.|+|||++.+..  ++.++|||||||++|+|++|..||.......
T Consensus       158 -----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  232 (295)
T 2clq_A          158 -----YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ  232 (295)
T ss_dssp             -----TTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH
T ss_pred             -----CCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh
Confidence                 1446777777776654321   23457899999999997653  7899999999999999999999997544332


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ............                                              ......++..+.+||.+||+.|
T Consensus       233 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l~~d  266 (295)
T 2clq_A          233 AAMFKVGMFKVH----------------------------------------------PEIPESMSAEAKAFILKCFEPD  266 (295)
T ss_dssp             HHHHHHHHHCCC----------------------------------------------CCCCTTSCHHHHHHHHHTTCSS
T ss_pred             HHHHhhcccccc----------------------------------------------ccccccCCHHHHHHHHHHccCC
Confidence            211111110000                                              0112345677899999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCcc
Q 047395          409 PSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~~  429 (432)
                      |++|||+.|+|+||||+....
T Consensus       267 p~~Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          267 PDKRACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             TTTSCCHHHHHTSGGGCC---
T ss_pred             hhhCCCHHHHhcChhhhhccc
Confidence            999999999999999987543

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-45  Score=358.69  Aligned_cols=250  Identities=18%  Similarity=0.287  Sum_probs=203.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCC-------CcEEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEe
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRET-------GETVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQI  161 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~-------~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~  161 (432)
                      ...++|++.+.||+|+||+||+|++..+       +..||||+++..  ......+.+|++++..+ +|     +||+++
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----pnIv~~  140 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH-----KNIINL  140 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC-----TTBCCE
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCC-----chhhhh
Confidence            4467999999999999999999997543       357999999753  33446788999999999 55     999999


Q ss_pred             ecccccCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCC
Q 047395          162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNY--------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPE  226 (432)
Q Consensus       162 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~  226 (432)
                      ++++...+..|+||||+ +++|.+++.....              ..+++..++.++.||+.||.|||++||+||||||+
T Consensus       141 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  220 (382)
T 3tt0_A          141 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR  220 (382)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             eeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcc
Confidence            99999999999999999 8899999987541              35999999999999999999999999999999999


Q ss_pred             cEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCcc
Q 047395          227 NILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYP  301 (432)
Q Consensus       227 NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~  301 (432)
                      |||++.+                           +.+||+|||++......     .....+|+.|+|||++.+..++.+
T Consensus       221 NIll~~~---------------------------~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  273 (382)
T 3tt0_A          221 NVLVTED---------------------------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ  273 (382)
T ss_dssp             GEEECTT---------------------------CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHH
T ss_pred             eEEEcCC---------------------------CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCch
Confidence            9997544                           45666666666543321     223456889999999999999999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCc
Q 047395          302 CDMWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP  380 (432)
Q Consensus       302 sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (432)
                      +|||||||++|+|++ |..||.+.+..+....+......                                         
T Consensus       274 ~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------------------  312 (382)
T 3tt0_A          274 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM-----------------------------------------  312 (382)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC-----------------------------------------
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-----------------------------------------
Confidence            999999999999999 99999887765554443221110                                         


Q ss_pred             hhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       381 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                             .....+++.+.+||.+||+.||++|||+.|++++
T Consensus       313 -------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          313 -------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             -------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                   0112456678999999999999999999999864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-46  Score=354.85  Aligned_cols=255  Identities=25%  Similarity=0.412  Sum_probs=195.2

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-------hhhHhHHHHHHHHHHHHhcCCCCCceeEee
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-------KYREAAMTEIDVLELLKRYDRSGSRCVQIR  162 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~  162 (432)
                      ++.+.++|++.+.||+|+||.||+|++..+++.||||+++...       .....+.+|+.++..+... ..|+||++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~~h~~i~~~~  104 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAG-GGHPGVIRLL  104 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSS-CCCSSBCCEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhccc-CCCCCeeeEE
Confidence            4566789999999999999999999999999999999996432       1234566799999988421 1249999999


Q ss_pred             cccccCCeEEEEEcc-C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCC
Q 047395          163 NWFDYRNHICIVFEM-L-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       163 ~~~~~~~~~~lv~e~-~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      +++...+..++|||+ + +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.        
T Consensus       105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--------  174 (312)
T 2iwi_A          105 DWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--------  174 (312)
T ss_dssp             EEC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET--------
T ss_pred             EEEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC--------
Confidence            999999999999998 5 899999998765  6999999999999999999999999999999999999762        


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCCC-ccchHHHHHHHHHHHHhCC
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGWS-YPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~-~~sDiwSlGvil~elltg~  318 (432)
                                        .++.++|+|||++...... .....||+.|+|||++.+..+. .++|||||||++|+|++|+
T Consensus       175 ------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~  236 (312)
T 2iwi_A          175 ------------------RRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD  236 (312)
T ss_dssp             ------------------TTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             ------------------CCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCC
Confidence                              2345777777776654332 3345789999999999877664 5899999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||.....      +....                       ..                          ....++..+.
T Consensus       237 ~pf~~~~~------~~~~~-----------------------~~--------------------------~~~~~~~~~~  261 (312)
T 2iwi_A          237 IPFERDQE------ILEAE-----------------------LH--------------------------FPAHVSPDCC  261 (312)
T ss_dssp             CSCCSHHH------HHHTC-----------------------CC--------------------------CCTTSCHHHH
T ss_pred             CCCCChHH------Hhhhc-----------------------cC--------------------------CcccCCHHHH
Confidence            99964211      00000                       00                          1124566789


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +||.+||+.||++|||++|+++||||+...
T Consensus       262 ~li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          262 ALIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             HHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence            999999999999999999999999998753

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=5.6e-46  Score=346.70  Aligned_cols=251  Identities=20%  Similarity=0.240  Sum_probs=203.2

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhh--------hHhHHHHHHHHHHHHhcCCCCCceeEeecc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY--------REAAMTEIDVLELLKRYDRSGSRCVQIRNW  164 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~--------~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~  164 (432)
                      ..++|++.+.||+|+||+||+|++..+++.||||++......        ...+.+|+.++..++|     +||++++++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~   91 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH-----PNIVKLYGL   91 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCC-----TTBCCEEEE
T ss_pred             hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCC-----CCchhhhee
Confidence            357899999999999999999999999999999998532211        1567889998888866     999999999


Q ss_pred             cccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cEeccCCCCcEEeecCCccccCCc
Q 047395          165 FDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       165 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                      +....  ++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++|  |+||||||+|||++.++       
T Consensus        92 ~~~~~--~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~-------  161 (287)
T 4f0f_A           92 MHNPP--RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD-------  161 (287)
T ss_dssp             ETTTT--EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCC-------
T ss_pred             ecCCC--eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccC-------
Confidence            87765  6999999 899999987654 46999999999999999999999999  99999999999986543       


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHh--CCCCCccchHHHHHHHHHHHHhCCC
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL--GLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                     .+....+||+|||++...........||+.|+|||++.  ...++.++|||||||++|+|++|..
T Consensus       162 ---------------~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~  226 (287)
T 4f0f_A          162 ---------------ENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG  226 (287)
T ss_dssp             ---------------TTCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSC
T ss_pred             ---------------CCCceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCC
Confidence                           12334589999999887666666678999999999984  4457899999999999999999999


Q ss_pred             CCCCCCcHHH--HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          320 LFQTHENLEH--LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       320 pf~~~~~~~~--~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ||...+....  ...+.. .+..                                              ......+++.+
T Consensus       227 pf~~~~~~~~~~~~~~~~-~~~~----------------------------------------------~~~~~~~~~~l  259 (287)
T 4f0f_A          227 PFDEYSYGKIKFINMIRE-EGLR----------------------------------------------PTIPEDCPPRL  259 (287)
T ss_dssp             TTTTCCCCHHHHHHHHHH-SCCC----------------------------------------------CCCCTTSCHHH
T ss_pred             CCccccccHHHHHHHHhc-cCCC----------------------------------------------CCCCcccCHHH
Confidence            9986554332  111111 0000                                              01123456778


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      .+||.+||+.||++|||+.|+++
T Consensus       260 ~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          260 RNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhcCChhhCcCHHHHHH
Confidence            99999999999999999999985

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.3e-46  Score=355.32  Aligned_cols=256  Identities=16%  Similarity=0.220  Sum_probs=187.8

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCc---EEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~---~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      ...++|++.+.||+|+||+||+|++..++.   .||||+++..   ....+.+.+|+.+++.++|     +||+++++++
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~   94 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH-----PHVAKLVGVS   94 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCC-----TTBCCCCEEE
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCC-----Cceehhhcee
Confidence            346789999999999999999999887765   8999998743   2345678889999888866     9999999998


Q ss_pred             ccCCeE------EEEEccC-CCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCC
Q 047395          166 DYRNHI------CIVFEML-GPSLYDFLRKNNY----RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE  234 (432)
Q Consensus       166 ~~~~~~------~lv~e~~-~~~L~~~l~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  234 (432)
                      ......      ++||||+ +++|.+++.....    ..+++..++.++.||+.||.|||++||+||||||+|||++.  
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~--  172 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAE--  172 (323)
T ss_dssp             ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT--
T ss_pred             eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcC--
Confidence            776544      9999999 8899999975421    24899999999999999999999999999999999999654  


Q ss_pred             ccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHH
Q 047395          235 YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC  309 (432)
Q Consensus       235 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv  309 (432)
                                               ++.+||+|||++......     .....+|+.|+|||++.+..++.++|||||||
T Consensus       173 -------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  227 (323)
T 3qup_A          173 -------------------------DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGV  227 (323)
T ss_dssp             -------------------------TSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             -------------------------CCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHH
Confidence                                     455677777766543221     12234678899999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhh
Q 047395          310 ILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ  388 (432)
Q Consensus       310 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (432)
                      ++|+|++ |..||.+.+..+....+......                                                .
T Consensus       228 il~ell~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------------------------~  259 (323)
T 3qup_A          228 TMWEIMTRGQTPYAGIENAEIYNYLIGGNRL------------------------------------------------K  259 (323)
T ss_dssp             HHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC------------------------------------------------C
T ss_pred             HHHHHHhCCCCCccccChHHHHHHHhcCCCC------------------------------------------------C
Confidence            9999999 99999887765554433221100                                                0


Q ss_pred             hcccchHHHHHHHHHccccCCCCCCC-------HHHHhcCCCCCCC
Q 047395          389 HVDHSAGYLIDLLQGLLRYDPSSRLT-------AHDALKHPFFTRD  427 (432)
Q Consensus       389 ~~~~~~~~l~~li~~~L~~dP~~R~t-------a~elL~hp~f~~~  427 (432)
                      ....+++.+.+||.+||+.||++|||       ++++++|||+...
T Consensus       260 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          260 QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence            11245667899999999999999999       7888899999764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=2.8e-46  Score=359.98  Aligned_cols=252  Identities=21%  Similarity=0.304  Sum_probs=199.3

Q ss_pred             eecCceEEEeeeecccceEEEEEE-----ecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCL-----DRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW  164 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~-----~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~  164 (432)
                      ...++|++.+.||+|+||.||+|+     +..+++.||||+++..  ......+.+|++++..+.+    |+||++++++
T Consensus        19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~----hpniv~~~~~   94 (359)
T 3vhe_A           19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH----HLNVVNLLGA   94 (359)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC----CTTBCCEEEE
T ss_pred             ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcC----Ccceeeeeee
Confidence            346789999999999999999998     5567789999999753  2334578899999999943    3999999999


Q ss_pred             cccC-CeEEEEEccC-CCCHHHHHHhcCC---------------------------------------------------
Q 047395          165 FDYR-NHICIVFEML-GPSLYDFLRKNNY---------------------------------------------------  191 (432)
Q Consensus       165 ~~~~-~~~~lv~e~~-~~~L~~~l~~~~~---------------------------------------------------  191 (432)
                      +... ..+++||||+ +++|.+++.....                                                   
T Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (359)
T 3vhe_A           95 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS  174 (359)
T ss_dssp             ECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred             eecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence            8765 4599999999 8999999987542                                                   


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCC
Q 047395          192 -------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP  258 (432)
Q Consensus       192 -------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  258 (432)
                                   ..+++..++.++.||+.||.|||++||+||||||+|||++.++                        
T Consensus       175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~------------------------  230 (359)
T 3vhe_A          175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN------------------------  230 (359)
T ss_dssp             ---------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG------------------------
T ss_pred             hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC------------------------
Confidence                         1289999999999999999999999999999999999976544                        


Q ss_pred             CCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 047395          259 KSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAM  332 (432)
Q Consensus       259 ~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~  332 (432)
                         .+||+|||++......     .....||+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+....
T Consensus       231 ---~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~  307 (359)
T 3vhe_A          231 ---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  307 (359)
T ss_dssp             ---CEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH
T ss_pred             ---cEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHH
Confidence               4566666655432211     223467899999999999999999999999999999998 9999987665443332


Q ss_pred             HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCC
Q 047395          333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSR  412 (432)
Q Consensus       333 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  412 (432)
                      ........                                               ..+..+++.+.+||.+||+.||++|
T Consensus       308 ~~~~~~~~-----------------------------------------------~~~~~~~~~l~~li~~~l~~dP~~R  340 (359)
T 3vhe_A          308 RLKEGTRM-----------------------------------------------RAPDYTTPEMYQTMLDCWHGEPSQR  340 (359)
T ss_dssp             HHHHTCCC-----------------------------------------------CCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHcCCCC-----------------------------------------------CCCCCCCHHHHHHHHHHccCChhhC
Confidence            22211100                                               0112456678999999999999999


Q ss_pred             CCHHHHhcC
Q 047395          413 LTAHDALKH  421 (432)
Q Consensus       413 ~ta~elL~h  421 (432)
                      ||+.|+++|
T Consensus       341 ps~~ell~~  349 (359)
T 3vhe_A          341 PTFSELVEH  349 (359)
T ss_dssp             CCHHHHHHH
T ss_pred             CCHHHHHHH
Confidence            999999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=4.9e-46  Score=367.04  Aligned_cols=271  Identities=24%  Similarity=0.289  Sum_probs=200.0

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHH-HhcCCCCCceeEeecccccC
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+.+.+.|.+.+.||+|+||+||.+ ...+|+.||||++....  .+.+.+|+.++..+ .|     |||+++++++...
T Consensus        10 ~~~l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~H-----pnIv~~~~~~~~~   81 (434)
T 2rio_A           10 EQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDH-----PNVIRYYCSETTD   81 (434)
T ss_dssp             SCSCSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTS-----TTBCCEEEEEECS
T ss_pred             hhhhhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCC-----CCcCeEEEEEecC
Confidence            3456678888999999999999875 45679999999986532  34577899999877 45     9999999999999


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCC-----CCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          169 NHICIVFEMLGPSLYDFLRKNNYRP-----FPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       169 ~~~~lv~e~~~~~L~~~l~~~~~~~-----l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                      +.+|+|||||+++|.+++.......     .++..++.++.||+.||+|||++||+||||||+|||++.++.......  
T Consensus        82 ~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~--  159 (434)
T 2rio_A           82 RFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQ--  159 (434)
T ss_dssp             SEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCT--
T ss_pred             CeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccc--
Confidence            9999999999889999998754211     123345789999999999999999999999999999976542211100  


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCCc-------cccccCCCcchhHHHhC-------CCCCccchHHHHHH
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-------NYIVSTRHYRAPEVILG-------LGWSYPCDMWSVGC  309 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~-------~~~~~~sDiwSlGv  309 (432)
                                  ..+....+||+|||++.......       ...+||+.|+|||++.+       ..++.++|||||||
T Consensus       160 ------------~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~  227 (434)
T 2rio_A          160 ------------TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC  227 (434)
T ss_dssp             ------------TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHH
T ss_pred             ------------cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHH
Confidence                        02345679999999887654322       23579999999999976       56899999999999


Q ss_pred             HHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhh
Q 047395          310 ILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ  388 (432)
Q Consensus       310 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (432)
                      ++|||++ |..||......+  ..+.......+                       ...                   ..
T Consensus       228 il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~-----------------------~~~-------------------~~  263 (434)
T 2rio_A          228 VFYYILSKGKHPFGDKYSRE--SNIIRGIFSLD-----------------------EMK-------------------CL  263 (434)
T ss_dssp             HHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCC-----------------------CCT-------------------TC
T ss_pred             HHHHHHhCCCCCCCCchhhH--HHHhcCCCCcc-----------------------ccc-------------------cc
Confidence            9999999 999997654332  11111111000                       000                   00


Q ss_pred             hcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       389 ~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ....+++++.+||.+||+.||.+|||+.|+++||||..
T Consensus       264 ~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          264 HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             ccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            01234567899999999999999999999999999975

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=6.1e-46  Score=347.74  Aligned_cols=255  Identities=22%  Similarity=0.289  Sum_probs=195.2

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+.++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|+.++..+.|.    +++..+..++...+..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~----~~i~~~~~~~~~~~~~   80 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGG----VGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTS----TTCCCEEEEEEETTEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCC----CCCCeeeeecCCCCce
Confidence            45689999999999999999999999999999999876433 334678899999999872    3444455555778899


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      ++||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+..                   
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~-------------------  140 (296)
T 4hgt_A           81 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL-------------------  140 (296)
T ss_dssp             EEEEECCCCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECC-------------------
T ss_pred             EEEEEccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeec-------------------
Confidence            9999999999999998644 46999999999999999999999999999999999999731                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC----------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE----------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                           .+..+.+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       141 -----~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  215 (296)
T 4hgt_A          141 -----GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW  215 (296)
T ss_dssp             -----GGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -----cCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCC
Confidence                 123456777777777653322          22457899999999999999999999999999999999999999


Q ss_pred             CCCCcHH---HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          322 QTHENLE---HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       322 ~~~~~~~---~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .+.+...   ....+.......|                                            .......+++.+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~l~  251 (296)
T 4hgt_A          216 QGLKAATKRQKYERISEKKMSTP--------------------------------------------IEVLCKGYPSEFA  251 (296)
T ss_dssp             SSCCCSSSSSHHHHHHHHHHHSC--------------------------------------------HHHHTTTSCHHHH
T ss_pred             cccchhhhhhhhhhhhcccccch--------------------------------------------hhhhhccCCHHHH
Confidence            7644321   1111111100000                                            0111235577799


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~  420 (432)
                      +||.+||+.||++|||++++++
T Consensus       252 ~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          252 TYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCHHHHHH
Confidence            9999999999999999999885

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.1e-46  Score=370.74  Aligned_cols=256  Identities=22%  Similarity=0.295  Sum_probs=195.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      .+|++.+.||+|+||+||. ....+++.||||++....  .....+|+.+++.+.    .||||+++++++......|+|
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~----~HpnIv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPEC--FSFADREVQLLRESD----EHPNVIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTT--EEECHHHHHHHHHSC----CCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhcc----CCCCcCeEEEEEecCCEEEEE
Confidence            4699999999999999764 345678999999986432  234668999988873    239999999999999999999


Q ss_pred             EccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          175 FEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       175 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ||||+++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++                    
T Consensus        97 ~E~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~--------------------  155 (432)
T 3p23_A           97 IELCAATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPN--------------------  155 (432)
T ss_dssp             EECCSEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCB--------------------
T ss_pred             EECCCCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCC--------------------
Confidence            9999889999998765 3456667789999999999999999999999999999986432                    


Q ss_pred             ccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhC---CCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 047395          255 KRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILIELCS-GEALFQTH  324 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvil~ellt-g~~pf~~~  324 (432)
                        .+....+||+|||++......      ....+||+.|+|||++.+   ..++.++|||||||++|||++ |..||...
T Consensus       156 --~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~  233 (432)
T 3p23_A          156 --AHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS  233 (432)
T ss_dssp             --TTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST
T ss_pred             --CCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh
Confidence              233456789999988764422      234579999999999984   467889999999999999999 99999654


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      ........    .+...                   ....                       ......+..+.+||.+|
T Consensus       234 ~~~~~~~~----~~~~~-------------------~~~~-----------------------~~~~~~~~~~~~li~~~  267 (432)
T 3p23_A          234 LQRQANIL----LGACS-------------------LDCL-----------------------HPEKHEDVIARELIEKM  267 (432)
T ss_dssp             TTHHHHHH----TTCCC-------------------CTTS-----------------------CTTCHHHHHHHHHHHHH
T ss_pred             hHHHHHHH----hccCC-------------------cccc-----------------------CccccccHHHHHHHHHH
Confidence            43322111    11000                   0000                       00012344578999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 047395          405 LRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      |+.||++|||+.|+++||||..
T Consensus       268 L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          268 IAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             SCSSGGGSCCHHHHHTSTTTCC
T ss_pred             HhCCHhhCCCHHHHHhCccccC
Confidence            9999999999999999999976

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.2e-46  Score=363.00  Aligned_cols=246  Identities=21%  Similarity=0.329  Sum_probs=200.6

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++..  ......+.+|+.+++.+.|     +||+++++++...+.+
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~~~~~~~~~~~~  187 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH-----PNIVRLIGVCTQKQPI  187 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCC-----TTBCCEEEEECSSSSC
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCC-----CCEEEEEEEEecCCCc
Confidence            57899999999999999999999999999999998743  2334578889999988876     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|.+++...+ ..+++..+..++.||+.||+|||++||+||||||+|||++.++                
T Consensus       188 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~----------------  250 (377)
T 3cbl_A          188 YIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN----------------  250 (377)
T ss_dssp             EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC----------------
T ss_pred             EEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCC----------------
Confidence            9999999 899999998754 3589999999999999999999999999999999999976544                


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH  324 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~  324 (432)
                                 .+||+|||++.......     ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.
T Consensus       251 -----------~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~  319 (377)
T 3cbl_A          251 -----------VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL  319 (377)
T ss_dssp             -----------CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred             -----------cEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                       45566666554322211     11235678999999998889999999999999999998 99999887


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+....+..... +                     .                          .+..+++.+.+||.+|
T Consensus       320 ~~~~~~~~~~~~~~-~---------------------~--------------------------~~~~~~~~l~~li~~c  351 (377)
T 3cbl_A          320 SNQQTREFVEKGGR-L---------------------P--------------------------CPELCPDAVFRLMEQC  351 (377)
T ss_dssp             CHHHHHHHHHTTCC-C---------------------C--------------------------CCTTCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCC-C---------------------C--------------------------CCCCCCHHHHHHHHHH
Confidence            76554433322110 0                     0                          1123566789999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 047395          405 LRYDPSSRLTAHDALK  420 (432)
Q Consensus       405 L~~dP~~R~ta~elL~  420 (432)
                      |+.||++|||+.++++
T Consensus       352 l~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          352 WAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             cCCCchhCcCHHHHHH
Confidence            9999999999999975

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.3e-45  Score=355.99  Aligned_cols=257  Identities=14%  Similarity=0.177  Sum_probs=193.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCC-----CcEEEEEEeechhhhhHhHHHHHHHHHHHHh----------cCCCCCce
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRET-----GETVAIKVVRSIKKYREAAMTEIDVLELLKR----------YDRSGSRC  158 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~-----~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~----------~~~~~~~i  158 (432)
                      .++|++.+.||+|+||.||+|.+..+     ++.||||++....   ....+|++++..+.+          ....|+||
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i  110 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV  110 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence            45999999999999999999998765     5889999986532   234455555554432          23456999


Q ss_pred             eEeecccccC----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCC
Q 047395          159 VQIRNWFDYR----NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE  234 (432)
Q Consensus       159 v~~~~~~~~~----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  234 (432)
                      +++++++...    ...|+||||+|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.  
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~--  187 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY--  187 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES--
T ss_pred             CeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec--
Confidence            9999988654    5689999999999999998753 46999999999999999999999999999999999999862  


Q ss_pred             ccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC----------ccccccCCCcchhHHHhCCCCCccchH
Q 047395          235 YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----------HNYIVSTRHYRAPEVILGLGWSYPCDM  304 (432)
Q Consensus       235 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDi  304 (432)
                                             +..+.+||+|||++......          ....+||+.|+|||++.+..++.++||
T Consensus       188 -----------------------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  244 (364)
T 3op5_A          188 -----------------------KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDL  244 (364)
T ss_dssp             -----------------------SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHH
T ss_pred             -----------------------CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhH
Confidence                                   13456777777776543211          133469999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhh
Q 047395          305 WSVGCILIELCSGEALFQTHENLE-HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ  383 (432)
Q Consensus       305 wSlGvil~elltg~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (432)
                      |||||++|||++|..||.+..... ..............                                         
T Consensus       245 ~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------  283 (364)
T 3op5_A          245 EILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIA-----------------------------------------  283 (364)
T ss_dssp             HHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHH-----------------------------------------
T ss_pred             HHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHH-----------------------------------------
Confidence            999999999999999998643322 22111111100000                                         


Q ss_pred             hhhhh--hcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          384 NLVMQ--HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       384 ~~~~~--~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      .....  ....++..+.+||..||+.||.+||++.++++
T Consensus       284 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          284 SLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            00000  01356778999999999999999999998874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.2e-46  Score=357.31  Aligned_cols=263  Identities=22%  Similarity=0.239  Sum_probs=193.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC----C
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR----N  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~----~  169 (432)
                      .++|++.+.||+|+||+||+|++.  ++.||||+++...........|+.++..++|     +||+++++++...    .
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~~~~~~~~~~~~~~   95 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKH-----ENILQFIGAEKRGTSVDV   95 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCC-----TTBCCEEEEEEEECSSSE
T ss_pred             hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCC-----CCchhhcceeccCCCCCc
Confidence            368999999999999999999875  7999999998665555566678877777765     9999999998764    3


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC----------CcEeccCCCCcEEeecCCcccc
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL----------RLIHTDLKPENILFVSPEYLKI  238 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----------~ivHrDlkp~NIli~~~~~~k~  238 (432)
                      .+|+||||+ +++|.+++...   .+++..++.++.||+.||.|||+.          ||+||||||+|||++.      
T Consensus        96 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~------  166 (322)
T 3soc_A           96 DLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN------  166 (322)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECT------
T ss_pred             eEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECC------
Confidence            589999999 88999999875   499999999999999999999999          9999999999999654      


Q ss_pred             CCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCC-----CCCccchHHHHH
Q 047395          239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGL-----GWSYPCDMWSVG  308 (432)
Q Consensus       239 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~-----~~~~~sDiwSlG  308 (432)
                                           .+.+||+|||++......     ....+||+.|+|||++.+.     .++.++||||||
T Consensus       167 ---------------------~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG  225 (322)
T 3soc_A          167 ---------------------NLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMG  225 (322)
T ss_dssp             ---------------------TCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred             ---------------------CCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHH
Confidence                                 456777777776543221     2235789999999999874     456788999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH-HHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhh
Q 047395          309 CILIELCSGEALFQTHENLEHLAMMERVLGPIPQH-MLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM  387 (432)
Q Consensus       309 vil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (432)
                      |++|||++|..||.+.................... +.....       ....  .|                ....  .
T Consensus       226 ~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~~----------------~~~~--~  278 (322)
T 3soc_A          226 LVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVV-------HKKK--RP----------------VLRD--Y  278 (322)
T ss_dssp             HHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHT-------TSCC--CC----------------CCCG--G
T ss_pred             HHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhh-------cccC--CC----------------Cccc--c
Confidence            99999999999998654322111111111111110 000000       0000  00                0000  0


Q ss_pred             hhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       388 ~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      ......+..+.+||.+||+.||++|||+.|+++
T Consensus       279 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          279 WQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             GGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            001233556899999999999999999999985

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.6e-45  Score=364.94  Aligned_cols=245  Identities=24%  Similarity=0.345  Sum_probs=200.3

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC-CeE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR-NHI  171 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~-~~~  171 (432)
                      -.++|++.+.||+|+||.||+|.+.  ++.||||+++... ..+.+.+|+.+++.++|     +||+++++++... +.+
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~~~~~  262 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRH-----SNLVQLLGVIVEEKGGL  262 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-TSHHHHHHHHHHHTCCC-----TTBCCEEEEEECTTSCE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-HHHHHHHHHHHHHhccC-----CCEEEEEEEEEcCCCce
Confidence            3578999999999999999999875  7899999997643 45678899999999876     9999999987654 489


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.                  
T Consensus       263 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~------------------  324 (450)
T 1k9a_A          263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE------------------  324 (450)
T ss_dssp             EEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT------------------
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECC------------------
Confidence            9999999 899999999876455899999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEH  329 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~  329 (432)
                               ++.+||+|||+++..........+|..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+.
T Consensus       325 ---------~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~  395 (450)
T 1k9a_A          325 ---------DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV  395 (450)
T ss_dssp             ---------TSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH
T ss_pred             ---------CCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                     456777777777654444444467889999999999999999999999999999998 9999987665544


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+.....                                                ...+..+++.+.+||.+||+.||
T Consensus       396 ~~~i~~~~~------------------------------------------------~~~p~~~~~~l~~li~~cl~~dp  427 (450)
T 1k9a_A          396 VPRVEKGYK------------------------------------------------MDAPDGCPPAVYDVMKNCWHLDA  427 (450)
T ss_dssp             HHHHHTTCC------------------------------------------------CCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHHHcCCC------------------------------------------------CCCCCcCCHHHHHHHHHHcCCCh
Confidence            443322110                                                01123566779999999999999


Q ss_pred             CCCCCHHHHhc
Q 047395          410 SSRLTAHDALK  420 (432)
Q Consensus       410 ~~R~ta~elL~  420 (432)
                      ++|||+.++++
T Consensus       428 ~~Rpt~~~l~~  438 (450)
T 1k9a_A          428 ATRPTFLQLRE  438 (450)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999874

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=8.6e-46  Score=354.73  Aligned_cols=255  Identities=16%  Similarity=0.214  Sum_probs=191.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecC---CCcEEEEEEeechhh------------hhHhHHHHHHHHHHHHhcCCCCCce
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE---TGETVAIKVVRSIKK------------YREAAMTEIDVLELLKRYDRSGSRC  158 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~---~~~~vaiK~~~~~~~------------~~~~~~~E~~~l~~l~~~~~~~~~i  158 (432)
                      .++|++.+.||+|+||.||+|++..   ++..||||++.....            ....+.+|+..+..+.|     +||
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h-----~ni  110 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDY-----LGI  110 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSC-----CCC
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccc-----cCc
Confidence            4689999999999999999999987   788999999864321            11123344444544444     999


Q ss_pred             eEeeccccc----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCC
Q 047395          159 VQIRNWFDY----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE  234 (432)
Q Consensus       159 v~~~~~~~~----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  234 (432)
                      +++++++..    ....|+||||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus       111 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          111 PLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             CCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSS
T ss_pred             ceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCC
Confidence            999999876    78999999999999999998765  699999999999999999999999999999999999987543


Q ss_pred             ccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC----------ccccccCCCcchhHHHhCCCCCccchH
Q 047395          235 YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----------HNYIVSTRHYRAPEVILGLGWSYPCDM  304 (432)
Q Consensus       235 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDi  304 (432)
                                               ...+||+|||++......          .....||+.|+|||++.+..++.++||
T Consensus       189 -------------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  243 (345)
T 2v62_A          189 -------------------------PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDV  243 (345)
T ss_dssp             -------------------------TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHH
T ss_pred             -------------------------CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhH
Confidence                                     236777777777543211          134578999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCC--CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchh
Q 047395          305 WSVGCILIELCSGEALFQTH--ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL  382 (432)
Q Consensus       305 wSlGvil~elltg~~pf~~~--~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (432)
                      |||||++|||++|..||.+.  +..............+|.......                                  
T Consensus       244 ~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------  289 (345)
T 2v62_A          244 EILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWA----------------------------------  289 (345)
T ss_dssp             HHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHS----------------------------------
T ss_pred             HHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhc----------------------------------
Confidence            99999999999999999652  222222222233333333221110                                  


Q ss_pred             hhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       383 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                            ....++..+.+||.+||+.||++|||++++++
T Consensus       290 ------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          290 ------PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             ------CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ------cccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                  01256777999999999999999999999885

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.8e-45  Score=339.45  Aligned_cols=246  Identities=24%  Similarity=0.340  Sum_probs=203.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .++|++.+.||+|+||.||+|.+. +++.||+|+++......+.+.+|+.++..++|     +||+++++++...+..++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~~~~l   80 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKLVQLYGVCLEQAPICL   80 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCC-----TTBCCEEEEECSSSSCEE
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCC-----CCEeeEEEEEccCCCeEE
Confidence            468999999999999999999986 57889999998766556778899999998876     999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.                    
T Consensus        81 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~--------------------  139 (267)
T 3t9t_A           81 VTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE--------------------  139 (267)
T ss_dssp             EECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECG--------------------
T ss_pred             EEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECC--------------------
Confidence            99999 899999998754 46899999999999999999999999999999999999654                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                             ++.++|+|||++......    .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+..
T Consensus       140 -------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~  212 (267)
T 3t9t_A          140 -------NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS  212 (267)
T ss_dssp             -------GGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             -------CCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH
Confidence                   445777777766543221    223456788999999998899999999999999999999 99999887665


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+.......                                                .....+..+.+||.+||+.
T Consensus       213 ~~~~~i~~~~~~~------------------------------------------------~~~~~~~~l~~li~~~l~~  244 (267)
T 3t9t_A          213 EVVEDISTGFRLY------------------------------------------------KPRLASTHVYQIMNHCWRE  244 (267)
T ss_dssp             HHHHHHHTTCCCC------------------------------------------------CCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhcCCcCC------------------------------------------------CCccCcHHHHHHHHHHccC
Confidence            5544432211100                                                0123456688999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 047395          408 DPSSRLTAHDALKH  421 (432)
Q Consensus       408 dP~~R~ta~elL~h  421 (432)
                      ||++|||+.+++++
T Consensus       245 ~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          245 RPEDRPAFSRLLRQ  258 (267)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=2.7e-45  Score=364.57  Aligned_cols=259  Identities=20%  Similarity=0.284  Sum_probs=203.2

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ..+.++|++.++||+|+||.||+|++..+++.||||+++... ....+..|++++..|.+.    +++..+..++...+.
T Consensus         3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~----~~i~~i~~~~~~~~~   77 (483)
T 3sv0_A            3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGG----TGIPNVRWFGVEGDY   77 (483)
T ss_dssp             CEETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTS----TTCCCEEEEEEETTE
T ss_pred             CCcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCC----CCCCeEEEEEeeCCE
Confidence            356789999999999999999999999999999999886433 334578899999998872    556666666677889


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          171 ICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       171 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      .||||||++++|.+++.... ..+++..++.|+.||+.||.|||++||+||||||+||||..                  
T Consensus        78 ~~lvme~~g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~------------------  138 (483)
T 3sv0_A           78 NVLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL------------------  138 (483)
T ss_dssp             EEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECC------------------
T ss_pred             EEEEEECCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEec------------------
Confidence            99999999999999998644 46999999999999999999999999999999999999732                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCCc----------cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQEH----------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                            -+..+.+||+|||++.......          ...+||+.|+|||++.+..++.++|||||||+||||++|..|
T Consensus       139 ------~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~P  212 (483)
T 3sv0_A          139 ------GRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP  212 (483)
T ss_dssp             ------GGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             ------CCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence                  1244567777777776543221          246799999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.........+.....                                         .............++.++.+|
T Consensus       213 f~~~~~~~~~~~~~~i~~-----------------------------------------~~~~~~~~~l~~~~p~~l~~l  251 (483)
T 3sv0_A          213 WQGLKAGTKKQKYEKISE-----------------------------------------KKVATSIEALCRGYPTEFASY  251 (483)
T ss_dssp             TSSCCCSSHHHHHHHHHH-----------------------------------------HHHHSCHHHHHTTSCHHHHHH
T ss_pred             CccccchhHHHHHHHHhh-----------------------------------------ccccccHHHHhcCCcHHHHHH
Confidence            987554322222211100                                         000001111224567789999


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      |.+||+.||++||++.+|++
T Consensus       252 i~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          252 FHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHhcCChhhCcCHHHHHH
Confidence            99999999999999988764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=7.1e-46  Score=371.61  Aligned_cols=250  Identities=20%  Similarity=0.328  Sum_probs=207.7

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +.-.++|++.+.||+|+||.||+|.+..++..||||+++......+.+.+|+.+++.++|     +||+++++++...+.
T Consensus       216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~l~~~~~~~~~  290 (495)
T 1opk_A          216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQLLGVCTREPP  290 (495)
T ss_dssp             BCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCC-----TTBCCEEEEECSSSS
T ss_pred             ccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCC-----CCEeeEEEEEecCCc
Confidence            334578999999999999999999999999999999998665566788999999999977     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.+                
T Consensus       291 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~----------------  354 (495)
T 1opk_A          291 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGEN----------------  354 (495)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG----------------
T ss_pred             EEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCC----------------
Confidence            99999999 8999999988655679999999999999999999999999999999999997554                


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH  324 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~  324 (432)
                                 +.+||+|||+++.....    .....+|..|+|||++.+..++.++|||||||++|||++ |..||.+.
T Consensus       355 -----------~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~  423 (495)
T 1opk_A          355 -----------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI  423 (495)
T ss_dssp             -----------GCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             -----------CcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence                       45666666666543221    122345778999999998889999999999999999999 99999887


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+....+.....                                                ...+..+++.+.+||.+|
T Consensus       424 ~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~l~~li~~c  455 (495)
T 1opk_A          424 DLSQVYELLEKDYR------------------------------------------------MERPEGCPEKVYELMRAC  455 (495)
T ss_dssp             CGGGHHHHHHTTCC------------------------------------------------CCCCTTCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCC------------------------------------------------CCCCCCCCHHHHHHHHHH
Confidence            65554433322110                                                011234567789999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 047395          405 LRYDPSSRLTAHDALK  420 (432)
Q Consensus       405 L~~dP~~R~ta~elL~  420 (432)
                      |+.||++|||+.++++
T Consensus       456 l~~dP~~RPs~~el~~  471 (495)
T 1opk_A          456 WQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             cCcChhHCcCHHHHHH
Confidence            9999999999999986

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-45  Score=353.23  Aligned_cols=251  Identities=20%  Similarity=0.289  Sum_probs=203.7

Q ss_pred             ceecCceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      +...++|++.+.||+|+||.||+|++.     .+++.||||+++..  ......+.+|+.++..++|     +||+++++
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~  117 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN-----PNIVKLLG  117 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCC-----TTBCCEEE
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCC-----CCEEEEEE
Confidence            445678999999999999999999987     35589999999743  3345678899999998876     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEe
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNY----------------------RPFPVDLVREIGRQLLECVAFMHDLRLIH  220 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  220 (432)
                      ++...+..|+||||+ +++|.+++.....                      ..+++..++.++.||+.||.|||++||+|
T Consensus       118 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH  197 (343)
T 1luf_A          118 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH  197 (343)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            999999999999999 8899999987421                      46899999999999999999999999999


Q ss_pred             ccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhC
Q 047395          221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILG  295 (432)
Q Consensus       221 rDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~  295 (432)
                      |||||+|||++.                           ++.+||+|||++.....     ......+|+.|+|||++.+
T Consensus       198 ~Dlkp~NIl~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  250 (343)
T 1luf_A          198 RDLATRNCLVGE---------------------------NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY  250 (343)
T ss_dssp             SCCSGGGEEECG---------------------------GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH
T ss_pred             CCCCcceEEECC---------------------------CCeEEEeecCCCcccccCccccccCCCcccceecChhhhcc
Confidence            999999999654                           45677777777654321     1223467889999999999


Q ss_pred             CCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHH
Q 047395          296 LGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIK  374 (432)
Q Consensus       296 ~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (432)
                      ..++.++|||||||++|+|++ |..||.+.+..+....+.....  +                                 
T Consensus       251 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~---------------------------------  295 (343)
T 1luf_A          251 NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI--L---------------------------------  295 (343)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--C---------------------------------
T ss_pred             CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCc--C---------------------------------
Confidence            899999999999999999999 9999988776555443322110  0                                 


Q ss_pred             HhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          375 AVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                                   ..+..++..+.+||.+||+.||++|||+.+++++
T Consensus       296 -------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          296 -------------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             -------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence                         0112456678999999999999999999999863

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=2e-45  Score=340.02  Aligned_cols=252  Identities=25%  Similarity=0.346  Sum_probs=194.8

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|++.+.||+|+||.||+|.+.  ++.||||+++...     ...+.+.+|+.+++.++|     +||+++++++...
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~   78 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH-----PNIIALRGVCLKE   78 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCC-----TTBCCEEEEECCC
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCC-----CCEeeEEEEEecC
Confidence            468999999999999999999875  8899999986432     223567889999998876     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cEeccCCCCcEEeecCCccccCCcccc
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR---LIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      +..|+||||+ +++|.+++...   .+++..++.++.||+.||.|||++|   |+||||||+|||++..+.-        
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~--------  147 (271)
T 3dtc_A           79 PNLCLVMEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN--------  147 (271)
T ss_dssp             --CEEEEECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS--------
T ss_pred             CceEEEEEcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc--------
Confidence            9999999999 89999998643   5999999999999999999999999   9999999999998652210        


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                 .....+.++|+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus       148 -----------~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  216 (271)
T 3dtc_A          148 -----------GDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG  216 (271)
T ss_dssp             -----------SCCSSCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred             -----------ccccCcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                       0113567999999988754332 2345789999999999999999999999999999999999999987


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+.......+.......                                               .....+++.+.+||.+
T Consensus       217 ~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~li~~  249 (271)
T 3dtc_A          217 IDGLAVAYGVAMNKLAL-----------------------------------------------PIPSTCPEPFAKLMED  249 (271)
T ss_dssp             SCHHHHHHHHHTSCCCC-----------------------------------------------CCCTTCCHHHHHHHHH
T ss_pred             CCHHHHHHhhhcCCCCC-----------------------------------------------CCCcccCHHHHHHHHH
Confidence            76554433221111000                                               0113456678999999


Q ss_pred             ccccCCCCCCCHHHHhcC
Q 047395          404 LLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~h  421 (432)
                      ||+.||++|||+.|++++
T Consensus       250 ~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          250 CWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCcccCcCHHHHHHH
Confidence            999999999999999864

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=3e-45  Score=345.89  Aligned_cols=250  Identities=23%  Similarity=0.341  Sum_probs=200.4

Q ss_pred             ecCceEEEeeeecccceEEEEEEe-----cCCCcEEEEEEeechh--hhhHhHHHHHHHHHHH-HhcCCCCCceeEeecc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLD-----RETGETVAIKVVRSIK--KYREAAMTEIDVLELL-KRYDRSGSRCVQIRNW  164 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~  164 (432)
                      ..++|++.+.||+|+||.||+|.+     ..+++.||||+++...  ...+.+.+|+.++..+ .|     +||++++++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~~i~~~~~~   95 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH-----MNIVNLLGA   95 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC-----TTBCCEEEE
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccC-----CCeeeEEEE
Confidence            357899999999999999999985     4567899999997432  3456788999999999 55     999999999


Q ss_pred             cccCCeEEEEEccC-CCCHHHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCc
Q 047395          165 FDYRNHICIVFEML-GPSLYDFLRKNNY----------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPEN  227 (432)
Q Consensus       165 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  227 (432)
                      +...+..++||||+ +++|.+++.....                ..+++..++.++.||+.||.|||++||+||||||+|
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  175 (313)
T 1t46_A           96 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN  175 (313)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce
Confidence            99999999999999 8899999987642                148999999999999999999999999999999999


Q ss_pred             EEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccc
Q 047395          228 ILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPC  302 (432)
Q Consensus       228 Ili~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~s  302 (432)
                      ||++.++.                           +||+|||++.......     ....||+.|+|||++.+..++.++
T Consensus       176 il~~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  228 (313)
T 1t46_A          176 ILLTHGRI---------------------------TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES  228 (313)
T ss_dssp             EEEETTTE---------------------------EEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHH
T ss_pred             EEEcCCCC---------------------------EEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHH
Confidence            99876554                           4555555444332221     223568889999999999999999


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCch
Q 047395          303 DMWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR  381 (432)
Q Consensus       303 DiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (432)
                      |||||||++|+|++ |..||.+.........+.......                                         
T Consensus       229 Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------------------  267 (313)
T 1t46_A          229 DVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM-----------------------------------------  267 (313)
T ss_dssp             HHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCC-----------------------------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCC-----------------------------------------
Confidence            99999999999999 999998766544333222211100                                         


Q ss_pred             hhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       382 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                            .....++..+.+||.+||+.||.+|||+.|++++
T Consensus       268 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          268 ------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                  0112456678999999999999999999999864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=7.6e-46  Score=352.47  Aligned_cols=257  Identities=18%  Similarity=0.261  Sum_probs=204.7

Q ss_pred             ceecCceEEEeeeecccceEEEEEE-----ecCCCcEEEEEEeec--hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCL-----DRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~-----~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      +...++|++.+.||+|+||.||+|+     +..+++.||||++..  .......+.+|+.++..+.|     +||+++++
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~  100 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH-----QNIVRCIG  100 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCC-----TTBCCEEE
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCC-----CCCCeEEE
Confidence            3446789999999999999999999     556788999999863  23445568889999998876     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccc
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNY-----RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLK  237 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  237 (432)
                      ++...+..|+||||+ +++|.+++.....     ..+++..++.++.||+.||.|||++||+||||||+|||++.++   
T Consensus       101 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~---  177 (327)
T 2yfx_A          101 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG---  177 (327)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS---
T ss_pred             EEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCC---
Confidence            999999999999999 9999999987542     3489999999999999999999999999999999999986432   


Q ss_pred             cCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCCCCccchHHHHHHHHH
Q 047395          238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI  312 (432)
Q Consensus       238 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~  312 (432)
                                           ....++|+|||++.....     ......||+.|+|||++.+..++.++|||||||++|
T Consensus       178 ---------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  236 (327)
T 2yfx_A          178 ---------------------PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW  236 (327)
T ss_dssp             ---------------------TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             ---------------------CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHH
Confidence                                 345688888887764322     123346788999999999989999999999999999


Q ss_pred             HHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcc
Q 047395          313 ELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD  391 (432)
Q Consensus       313 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (432)
                      +|++ |..||......+....+.......                                                ...
T Consensus       237 ellt~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~  268 (327)
T 2yfx_A          237 EIFSLGYMPYPSKSNQEVLEFVTSGGRMD------------------------------------------------PPK  268 (327)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHTTCCCC------------------------------------------------CCT
T ss_pred             HHHcCCCCCCCCcCHHHHHHHHhcCCCCC------------------------------------------------CCC
Confidence            9998 999998776655444332211100                                                012


Q ss_pred             cchHHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      .++..+.+||.+||+.||.+|||+.++++|.|+
T Consensus       269 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          269 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            456678999999999999999999999998765

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.4e-45  Score=348.38  Aligned_cols=249  Identities=20%  Similarity=0.315  Sum_probs=200.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      ..++|++.+.||+|+||.||+|.+.     .+++.||||+++..  ......+.+|+.++..+.|     +||+++++++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~   95 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNH-----PHVIKLYGAC   95 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEE
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC-----CceeeEEEEE
Confidence            3578999999999999999999873     45589999999743  2344667889999888866     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNY----------------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTD  222 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD  222 (432)
                      ...+..++||||+ +++|.+++.....                      ..+++..++.++.||+.||.|||++||+|||
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  175 (314)
T 2ivs_A           96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD  175 (314)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccc
Confidence            9999999999999 8999999987542                      2389999999999999999999999999999


Q ss_pred             CCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCC
Q 047395          223 LKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLG  297 (432)
Q Consensus       223 lkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~  297 (432)
                      |||+|||++.++                           .+||+|||++......     .....+|+.|+|||++.+..
T Consensus       176 ikp~NIli~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  228 (314)
T 2ivs_A          176 LAARNILVAEGR---------------------------KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI  228 (314)
T ss_dssp             CSGGGEEEETTT---------------------------EEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCE
T ss_pred             cchheEEEcCCC---------------------------CEEEccccccccccccccceeccCCCCcccccChhhhcCCC
Confidence            999999976544                           4666666665543221     12235678899999999988


Q ss_pred             CCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHh
Q 047395          298 WSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV  376 (432)
Q Consensus       298 ~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (432)
                      ++.++|||||||++|+|++ |..||.+.........+.....                                      
T Consensus       229 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~--------------------------------------  270 (314)
T 2ivs_A          229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHR--------------------------------------  270 (314)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC--------------------------------------
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCc--------------------------------------
Confidence            9999999999999999999 9999987665544433321110                                      


Q ss_pred             hcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                                ......+++.+.+||.+||+.||++|||+.|++++
T Consensus       271 ----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          271 ----------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                      00112456778999999999999999999999864

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=3.2e-45  Score=346.48  Aligned_cols=254  Identities=24%  Similarity=0.376  Sum_probs=183.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh--hh-HhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YR-EAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~-~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .++|++++.||+|+||.||+|++..+++.||||++.....  .. ..+..+..++..+.     |+||+++++++...+.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~-----h~~i~~~~~~~~~~~~   98 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHD-----CPYIVQCFGTFITNTD   98 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTT-----CTTBCCEEEEEECSSE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcC-----CCceeeEEEEEecCCc
Confidence            4689999999999999999999999999999999975322  11 22222333344444     4999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .|+||||+++.+..+..... ..+++..++.++.||+.||.|||++ ||+||||||+|||++.                 
T Consensus        99 ~~lv~e~~~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~-----------------  160 (318)
T 2dyl_A           99 VFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE-----------------  160 (318)
T ss_dssp             EEEEECCCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECT-----------------
T ss_pred             EEEEEeccCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECC-----------------
Confidence            99999999777777766533 4699999999999999999999995 9999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHh-----CCCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                ++.+||+|||++......  .....||+.|+|||++.     +..++.++|||||||++|+|++|..||.
T Consensus       161 ----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (318)
T 2dyl_A          161 ----------RGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK  230 (318)
T ss_dssp             ----------TSCEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ----------CCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCC
Confidence                      455777777766543222  23357899999999995     4568899999999999999999999998


Q ss_pred             CCCc-HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          323 THEN-LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       323 ~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .... .+....+.....+.                      .+                        ....++..+.+||
T Consensus       231 ~~~~~~~~~~~~~~~~~~~----------------------~~------------------------~~~~~~~~l~~li  264 (318)
T 2dyl_A          231 NCKTDFEVLTKVLQEEPPL----------------------LP------------------------GHMGFSGDFQSFV  264 (318)
T ss_dssp             TCCSHHHHHHHHHHSCCCC----------------------CC------------------------SSSCCCHHHHHHH
T ss_pred             CCCccHHHHHHHhccCCCC----------------------CC------------------------ccCCCCHHHHHHH
Confidence            6433 33333222211000                      00                        0123566789999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      .+||+.||.+|||++|+++||||++
T Consensus       265 ~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          265 KDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             HHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             HHHccCChhHCcCHHHHhhCHHHHh
Confidence            9999999999999999999999975

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.3e-46  Score=363.35  Aligned_cols=281  Identities=20%  Similarity=0.321  Sum_probs=207.4

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ..+.++|++.+.||+|+||+||+|++..+++.||||+++...  ...+.+.+|++++..++|     +||+++++++...
T Consensus         5 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----pnIv~~~~~~~~~   79 (396)
T 4eut_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH-----KNIVKLFAIEEET   79 (396)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCC-----TTBCCEEEEEECT
T ss_pred             CCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCC-----CCCCeEEEeeccC
Confidence            445679999999999999999999999999999999997533  234567789999999876     9999999998765


Q ss_pred             C--eEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          169 N--HICIVFEML-GPSLYDFLRKNNY-RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       169 ~--~~~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      +  ..|+||||+ +++|.+++..... ..+++..++.++.||+.||+|||++||+||||||+|||+...           
T Consensus        80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-----------  148 (396)
T 4eut_A           80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIG-----------  148 (396)
T ss_dssp             TTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEEC-----------
T ss_pred             CCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeec-----------
Confidence            4  889999999 8999999986432 239999999999999999999999999999999999997321           


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhC--------CCCCccchHHHHHHHHHHH
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILG--------LGWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~--------~~~~~~sDiwSlGvil~el  314 (432)
                                  .+....+||+|||++......  .....||+.|+|||++.+        ..++.++|||||||++|||
T Consensus       149 ------------~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el  216 (396)
T 4eut_A          149 ------------EDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA  216 (396)
T ss_dssp             ------------TTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHH
Confidence                        134456888888888764332  234579999999999875        4577899999999999999


Q ss_pred             HhCCCCCCCCCc-HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccc
Q 047395          315 CSGEALFQTHEN-LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS  393 (432)
Q Consensus       315 ltg~~pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (432)
                      ++|..||..... ......+.......|..........     ..+...|......                .......+
T Consensus       217 ~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~----------------~~~l~~~~  275 (396)
T 4eut_A          217 ATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKA-----ENGPIDWSGDMPV----------------SCSLSRGL  275 (396)
T ss_dssp             HHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECS-----TTCCEEEESSCCT----------------TCSSCHHH
T ss_pred             HHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheec-----cCCCcccCccCCc----------------ccccchHH
Confidence            999999975332 1112222333322222211111110     1111112111110                00112345


Q ss_pred             hHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          394 AGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       394 ~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      +..+.+||.+||+.||++|||++|+++
T Consensus       276 ~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          276 QVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             HHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             HhhchHHHHHhhccChhhhccHHHHHH
Confidence            667899999999999999999999864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=1.6e-45  Score=350.17  Aligned_cols=246  Identities=21%  Similarity=0.295  Sum_probs=191.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcE----EEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGET----VAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~----vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .++|++.+.||+|+||+||+|++..+++.    ||+|.++..  ......+.+|+.++..++|     +||+++++++..
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~   88 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN-----PHVCRLLGICLT   88 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCB-----TTBCCEEEEEES
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCC-----CCEeEEEEEEec
Confidence            46899999999999999999999888765    477776532  2345678899999999977     999999999987


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .. .++|+||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++            
T Consensus        89 ~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~------------  154 (327)
T 3poz_A           89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ------------  154 (327)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT------------
T ss_pred             CC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCC------------
Confidence            65 67888888 999999998754 4699999999999999999999999999999999999976644            


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                     .+||+|||++.......     ....+|+.|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       155 ---------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  219 (327)
T 3poz_A          155 ---------------HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  219 (327)
T ss_dssp             ---------------EEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ---------------CEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCC
Confidence                           46666666655432211     22346789999999999999999999999999999999 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+..+....+......                                                .....++..+.+|
T Consensus       220 ~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~l  251 (327)
T 3poz_A          220 YDGIPASEISSILEKGERL------------------------------------------------PQPPICTIDVYMI  251 (327)
T ss_dssp             TTTCCGGGHHHHHHTTCCC------------------------------------------------CCCTTBCHHHHHH
T ss_pred             ccCCCHHHHHHHHHcCCCC------------------------------------------------CCCccCCHHHHHH
Confidence            9877665544333221100                                                0112455668899


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 047395          401 LQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~h  421 (432)
                      |.+||+.||++|||+.|++++
T Consensus       252 i~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          252 MVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHcCCChhhCCCHHHHHHH
Confidence            999999999999999999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.9e-45  Score=350.86  Aligned_cols=250  Identities=18%  Similarity=0.265  Sum_probs=197.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeecc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNW  164 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~  164 (432)
                      ..++|++.+.||+|+||.||+|.+.     .+++.||||+++..  ....+.+.+|+.++..+ .|     |||++++++
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----p~iv~~~~~  117 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH-----ENIVNLLGA  117 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCC-----TTBCCEEEE
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCC-----CCeeeEEEE
Confidence            3578999999999999999999973     45678999999743  23456788999999999 56     999999999


Q ss_pred             cccCCeEEEEEccC-CCCHHHHHHhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecc
Q 047395          165 FDYRNHICIVFEML-GPSLYDFLRKNNY---------------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTD  222 (432)
Q Consensus       165 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD  222 (432)
                      +...+..|+||||+ +++|.+++.....                     ..+++..++.++.||+.||.|||++||+|||
T Consensus       118 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  197 (344)
T 1rjb_A          118 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD  197 (344)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             EeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            99999999999999 8999999987542                     2378999999999999999999999999999


Q ss_pred             CCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCC
Q 047395          223 LKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLG  297 (432)
Q Consensus       223 lkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~  297 (432)
                      |||+|||++.++.                           +||+|||++......     .....||+.|+|||++.+..
T Consensus       198 ikp~NIll~~~~~---------------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  250 (344)
T 1rjb_A          198 LAARNVLVTHGKV---------------------------VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI  250 (344)
T ss_dssp             CSGGGEEEETTTE---------------------------EEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             CChhhEEEcCCCc---------------------------EEeCCCccCcccccCccceeccCccCccCccCHHHhccCC
Confidence            9999999776554                           555555555432221     12245788999999999989


Q ss_pred             CCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHh
Q 047395          298 WSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV  376 (432)
Q Consensus       298 ~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (432)
                      ++.++|||||||++|+|+| |..||.+.........+.......                                    
T Consensus       251 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------------  294 (344)
T 1rjb_A          251 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKM------------------------------------  294 (344)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCC------------------------------------
T ss_pred             CChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCC------------------------------------
Confidence            9999999999999999998 999998766544333222111000                                    


Q ss_pred             hcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                                 .....+++.+.+||.+||+.||.+|||+.|+++|
T Consensus       295 -----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          295 -----------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                       0112346678999999999999999999999975

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=3.4e-45  Score=363.19  Aligned_cols=253  Identities=25%  Similarity=0.370  Sum_probs=206.5

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +...++|++.+.||+|+||+||+|.+. ++..||||+++......+.+.+|+.+++.++|     +||+++++++. .+.
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~l~~~~~-~~~  256 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH-----DKLVKLHAVVT-KEP  256 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCC-----TTBCCEEEEEC-SSS
T ss_pred             eechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCCC-----CCEeeEEEEEe-CCc
Confidence            445678999999999999999999975 46789999998766667789999999998876     99999999986 567


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.                 
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~-----------------  319 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA-----------------  319 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECT-----------------
T ss_pred             cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECC-----------------
Confidence            89999999 899999998643335899999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH  324 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~  324 (432)
                                ++.+||+|||+++.....    .....+|..|+|||++.+..++.++|||||||++|||+| |..||.+.
T Consensus       320 ----------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~  389 (454)
T 1qcf_A          320 ----------SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM  389 (454)
T ss_dssp             ----------TCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ----------CCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC
Confidence                      456777777776653321    122346778999999998899999999999999999999 99999987


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+....+.......                                                .+..+++.+.+||.+|
T Consensus       390 ~~~~~~~~i~~~~~~~------------------------------------------------~~~~~~~~l~~li~~c  421 (454)
T 1qcf_A          390 SNPEVIRALERGYRMP------------------------------------------------RPENCPEELYNIMMRC  421 (454)
T ss_dssp             CHHHHHHHHHHTCCCC------------------------------------------------CCTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCC------------------------------------------------CCCCCCHHHHHHHHHH
Confidence            7766655544321100                                                1124566789999999


Q ss_pred             cccCCCCCCCHHHHhc--CCCCC
Q 047395          405 LRYDPSSRLTAHDALK--HPFFT  425 (432)
Q Consensus       405 L~~dP~~R~ta~elL~--hp~f~  425 (432)
                      |+.||++|||++++++  ..+++
T Consensus       422 l~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          422 WKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             TCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             ccCChhHCcCHHHHHHHHHHHHh
Confidence            9999999999999975  34443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=1.4e-45  Score=342.92  Aligned_cols=248  Identities=23%  Similarity=0.309  Sum_probs=192.1

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCC---CcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRET---GETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~---~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ...++|++.+.||+|+||.||+|++..+   +..||+|+++..  ....+.+.+|+.++..+.|     +||+++++++.
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~   86 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-----PHIVKLIGVIT   86 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEEC
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCC-----CccceEEEEEc
Confidence            3467999999999999999999998654   457999998642  3345678889999888866     99999999985


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                       .+..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++           
T Consensus        87 -~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----------  153 (281)
T 1mp8_A           87 -ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND-----------  153 (281)
T ss_dssp             -SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-----------
T ss_pred             -cCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCC-----------
Confidence             46789999999 889999998754 4699999999999999999999999999999999999987654           


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                      .+||+|||++......    .....+|+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       154 ----------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p  217 (281)
T 1mp8_A          154 ----------------CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  217 (281)
T ss_dssp             ----------------EEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ----------------CEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCC
Confidence                            4556666655443221    122346788999999998899999999999999999997 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+..+....+......                                                .....+++.+.+|
T Consensus       218 f~~~~~~~~~~~i~~~~~~------------------------------------------------~~~~~~~~~l~~l  249 (281)
T 1mp8_A          218 FQGVKNNDVIGRIENGERL------------------------------------------------PMPPNCPPTLYSL  249 (281)
T ss_dssp             TTTCCGGGHHHHHHTTCCC------------------------------------------------CCCTTCCHHHHHH
T ss_pred             CCcCCHHHHHHHHHcCCCC------------------------------------------------CCCCCCCHHHHHH
Confidence            9887665544433221100                                                0112456778999


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 047395          401 LQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~h  421 (432)
                      |.+||+.||++|||+.|++++
T Consensus       250 i~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          250 MTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999863

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=2e-45  Score=345.24  Aligned_cols=253  Identities=23%  Similarity=0.296  Sum_probs=188.3

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc---
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD---  166 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~---  166 (432)
                      ++.+.++|++.+.||+|+||+||+|++  +++.||||++....  ......|.+++....   ..|+||+++++++.   
T Consensus         3 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~---l~h~niv~~~~~~~~~~   75 (301)
T 3q4u_A            3 QRTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD--EKSWFRETELYNTVM---LRHENILGFIASDMTSR   75 (301)
T ss_dssp             -CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHTC---CCCTTBCCEEEEEEEEE
T ss_pred             cccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc--chhhHHHHHHHHHhh---ccCcCeeeEEEeecccc
Confidence            456788999999999999999999987  58999999986533  344556666666521   23499999998854   


Q ss_pred             -cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCcEeccCCCCcEEeecCCcc
Q 047395          167 -YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH--------DLRLIHTDLKPENILFVSPEYL  236 (432)
Q Consensus       167 -~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~ivHrDlkp~NIli~~~~~~  236 (432)
                       ....+|+||||+ +++|.+++...   .+++..++.++.||+.||.|||        ++||+||||||+|||++.    
T Consensus        76 ~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~----  148 (301)
T 3q4u_A           76 HSSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK----  148 (301)
T ss_dssp             TTEEEEEEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECT----
T ss_pred             CCCceeEEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcC----
Confidence             346789999999 88999999654   5999999999999999999999        999999999999999654    


Q ss_pred             ccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-------ccccccCCCcchhHHHhCC------CCCccch
Q 047395          237 KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-------HNYIVSTRHYRAPEVILGL------GWSYPCD  303 (432)
Q Consensus       237 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~sD  303 (432)
                                             ++.+||+|||++......       ....+||+.|+|||++.+.      .++.++|
T Consensus       149 -----------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (301)
T 3q4u_A          149 -----------------------NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVD  205 (301)
T ss_dssp             -----------------------TSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHH
T ss_pred             -----------------------CCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhh
Confidence                                   455777777766543222       1234799999999999886      3457899


Q ss_pred             HHHHHHHHHHHHhC----------CCCCCCCCc----HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCC
Q 047395          304 MWSVGCILIELCSG----------EALFQTHEN----LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATS  369 (432)
Q Consensus       304 iwSlGvil~elltg----------~~pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (432)
                      ||||||++|||++|          ..||.....    ......+.......+                    ..+.    
T Consensus       206 vwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~----  261 (301)
T 3q4u_A          206 IWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRP--------------------NIPN----  261 (301)
T ss_dssp             HHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCC--------------------CCCG----
T ss_pred             HHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCC--------------------CCCh----
Confidence            99999999999999          788854321    111111110000000                    0000    


Q ss_pred             HHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          370 RESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                                       .......+..+.+||.+||+.||++|||+.|+++
T Consensus       262 -----------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          262 -----------------RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             -----------------GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             -----------------hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                             0012345677999999999999999999999985

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.3e-45  Score=354.57  Aligned_cols=253  Identities=14%  Similarity=0.142  Sum_probs=192.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCC--------CcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeE-----
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRET--------GETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ-----  160 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~--------~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~-----  160 (432)
                      .++|++.+.||+|+||.||+|++..+        ++.||||++...    +.+.+|+.++..++|     +||++     
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h-----~niv~~~~~~  111 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAK-----PLQVNKWKKL  111 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCC-----HHHHHHHHHH
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcc-----cchhhhhhhh
Confidence            47899999999999999999999874        889999998753    467889999999977     77766     


Q ss_pred             ----------eeccccc-CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEE
Q 047395          161 ----------IRNWFDY-RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL  229 (432)
Q Consensus       161 ----------~~~~~~~-~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  229 (432)
                                +++++.. .+..|+||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||
T Consensus       112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl  191 (352)
T 2jii_A          112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF  191 (352)
T ss_dssp             TTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEE
T ss_pred             ccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEE
Confidence                      4555544 67899999999999999999763347999999999999999999999999999999999999


Q ss_pred             eecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC----------CccccccCCCcchhHHHhCCCCC
Q 047395          230 FVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ----------EHNYIVSTRHYRAPEVILGLGWS  299 (432)
Q Consensus       230 i~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~  299 (432)
                      ++.++                         ...+||+|||++.....          ......||+.|+|||++.+..++
T Consensus       192 ~~~~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  246 (352)
T 2jii_A          192 VDPED-------------------------QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPS  246 (352)
T ss_dssp             EETTE-------------------------EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCC
T ss_pred             EcCCC-------------------------CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCC
Confidence            87654                         01455555555543221          11334789999999999999999


Q ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCC-cHHHHHH-HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhh
Q 047395          300 YPCDMWSVGCILIELCSGEALFQTHE-NLEHLAM-MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL  377 (432)
Q Consensus       300 ~~sDiwSlGvil~elltg~~pf~~~~-~~~~~~~-i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (432)
                      .++|||||||++|+|++|..||.... ....... ........+.                    ++.            
T Consensus       247 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~------------  294 (352)
T 2jii_A          247 RRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGP--------------------FVG------------  294 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCC--------------------EEC------------
T ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhh--------------------hhh------------
Confidence            99999999999999999999998654 2222222 2111111100                    000            


Q ss_pred             cCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          378 KLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                              .......++..+.+||.+||+.||++|||++++++
T Consensus       295 --------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          295 --------PCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             --------TTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             --------hccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence                    00011245677999999999999999999999874

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.7e-45  Score=344.86  Aligned_cols=264  Identities=23%  Similarity=0.299  Sum_probs=196.0

Q ss_pred             eecCceEEEeeeecccceEEEEEE----ecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCL----DRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~----~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ...++|++++.||+|+||+||+|+    +..+++.||||+++.. ......+.+|+.++..++|     +||+++++++.
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~   81 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH-----DNIVKYKGVCY   81 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEEC
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEe
Confidence            346789999999999999999998    5678999999998743 3444678899999998876     99999999875


Q ss_pred             c--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          167 Y--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       167 ~--~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                      .  ...+++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.        
T Consensus        82 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~--------  152 (295)
T 3ugc_A           82 SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR--------  152 (295)
T ss_dssp             HHHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE--------
T ss_pred             cCCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCe--------
Confidence            4  45689999999 999999998764 35999999999999999999999999999999999999876554        


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg  317 (432)
                                         +||+|||++......      .....+|..|+|||++.+..++.++|||||||++|+|++|
T Consensus       153 -------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g  213 (295)
T 3ugc_A          153 -------------------VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY  213 (295)
T ss_dssp             -------------------EEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHT
T ss_pred             -------------------EEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhc
Confidence                               555556555443221      1223467789999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ..||......     .....+..+....... ........                          ......+..+++.+
T Consensus       214 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~--------------------------~~~~~~~~~~~~~l  261 (295)
T 3ugc_A          214 IEKSKSPPAE-----FMRMIGNDKQGQMIVF-HLIELLKN--------------------------NGRLPRPDGCPDEI  261 (295)
T ss_dssp             TCTTCSHHHH-----HHHHHCTTCCTHHHHH-HHHHHHHT--------------------------TCCCCCCTTCCHHH
T ss_pred             ccccCCChHH-----HHhhhcCccccchhHH-HHHHHHhc--------------------------cCcCCCCcCcCHHH
Confidence            9998643211     1111111110000000 00000000                          00111234567889


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      .+||.+||+.||++|||+.|+++
T Consensus       262 ~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          262 YMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCChhhCCCHHHHHH
Confidence            99999999999999999999985

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=9.4e-46  Score=351.54  Aligned_cols=246  Identities=20%  Similarity=0.263  Sum_probs=193.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcE----EEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGET----VAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~----vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .++|++.+.||+|+||+||+|++..+++.    ||+|++....  .....+.+|+.++..+.|     +||+++++++. 
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~-   85 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH-----AHIVRLLGLCP-   85 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCC-----TTBCCEEEEEC-
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCC-----CCcCeEEEEEc-
Confidence            46899999999999999999999888876    7777764322  223456778888888766     99999999886 


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .+..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.              
T Consensus        86 ~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~--------------  150 (325)
T 3kex_A           86 GSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS--------------  150 (325)
T ss_dssp             BSSEEEEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESS--------------
T ss_pred             CCccEEEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECC--------------
Confidence            45688999999 899999998653 36999999999999999999999999999999999999654              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                   ++.+||+|||++......     .....||..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       151 -------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p  217 (325)
T 3kex_A          151 -------------PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP  217 (325)
T ss_dssp             -------------SSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             -------------CCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCC
Confidence                         445666777766543222     123467889999999999899999999999999999999 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+....+....+......                      .                          ....++..+.+|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~~~~l  249 (325)
T 3kex_A          218 YAGLRLAEVPDLLEKGERL----------------------A--------------------------QPQICTIDVYMV  249 (325)
T ss_dssp             TTTSCTTHHHHHHHTTCBC----------------------C--------------------------CCTTBCTTTTHH
T ss_pred             ccccCHHHHHHHHHcCCCC----------------------C--------------------------CCCcCcHHHHHH
Confidence            9887665544433221100                      0                          011234447799


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 047395          401 LQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~h  421 (432)
                      |.+||+.||.+|||+.|+++|
T Consensus       250 i~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          250 MVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=9.8e-45  Score=345.84  Aligned_cols=248  Identities=18%  Similarity=0.304  Sum_probs=200.0

Q ss_pred             cCceEEEeeeecccceEEEEEEec-------CCCcEEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeec
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR-------ETGETVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRN  163 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~-------~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~  163 (432)
                      .++|++.+.||+|+||.||+|.+.       .+++.||||+++..  ......+.+|+.++..+ .|     +||+++++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----p~iv~~~~  108 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH-----KNIINLLG  108 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCC-----TTBCCEEE
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcC-----CCEeeEEE
Confidence            578999999999999999999975       45678999999743  23456788999999999 55     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcE
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNY--------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI  228 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  228 (432)
                      ++...+.+|+||||+ +++|.+++.....              ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus       109 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI  188 (334)
T 2pvf_A          109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  188 (334)
T ss_dssp             EECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             EEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceE
Confidence            999999999999999 8899999986531              2489999999999999999999999999999999999


Q ss_pred             EeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccch
Q 047395          229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCD  303 (432)
Q Consensus       229 li~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sD  303 (432)
                      |++.                           ++.+||+|||++......     .....+|+.|+|||++.+..++.++|
T Consensus       189 ll~~---------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  241 (334)
T 2pvf_A          189 LVTE---------------------------NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  241 (334)
T ss_dssp             EECT---------------------------TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHH
T ss_pred             EEcC---------------------------CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHH
Confidence            9654                           445666777766543322     12235678899999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchh
Q 047395          304 MWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL  382 (432)
Q Consensus       304 iwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (432)
                      ||||||++|+|++ |..||.+.+..+....+......                                           
T Consensus       242 i~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------------------  278 (334)
T 2pvf_A          242 VWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM-------------------------------------------  278 (334)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCC-------------------------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCC-------------------------------------------
Confidence            9999999999999 99999887665554443322110                                           


Q ss_pred             hhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       383 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                           .....++..+.+||.+||+.||.+|||+.|++++
T Consensus       279 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          279 -----DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                 0112456678999999999999999999999864

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=3.3e-45  Score=347.16  Aligned_cols=252  Identities=20%  Similarity=0.324  Sum_probs=203.5

Q ss_pred             CceecCceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEee
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIR  162 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~  162 (432)
                      .+...++|++.+.||+|+||.||+|++.     .+++.||||++....  .....+.+|+.+++.+.|     +||++++
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~   94 (322)
T 1p4o_A           20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC-----HHVVRLL   94 (322)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCC-----TTBCCEE
T ss_pred             hcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCC-----CCEeeeE
Confidence            4556789999999999999999999876     457889999987432  334567789988888866     9999999


Q ss_pred             cccccCCeEEEEEccC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecC
Q 047395          163 NWFDYRNHICIVFEML-GPSLYDFLRKNN--------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSP  233 (432)
Q Consensus       163 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~  233 (432)
                      +++...+..++||||+ +++|.+++....        ...+++..++.++.||+.||.|||++||+||||||+|||++. 
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~-  173 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-  173 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT-
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcC-
Confidence            9999999999999999 889999997632        135799999999999999999999999999999999999654 


Q ss_pred             CccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHH
Q 047395          234 EYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVG  308 (432)
Q Consensus       234 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG  308 (432)
                                                ++.+||+|||++......     .....+|+.|+|||++.+..++.++||||||
T Consensus       174 --------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  227 (322)
T 1p4o_A          174 --------------------------DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG  227 (322)
T ss_dssp             --------------------------TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             --------------------------CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHH
Confidence                                      456777777776543222     1223568899999999998999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhh
Q 047395          309 CILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM  387 (432)
Q Consensus       309 vil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (432)
                      |++|+|++ |..||.+.+..+....+.....  +                                              
T Consensus       228 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~----------------------------------------------  259 (322)
T 1p4o_A          228 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGL--L----------------------------------------------  259 (322)
T ss_dssp             HHHHHHHHTSCCTTTTSCHHHHHHHHHTTCC--C----------------------------------------------
T ss_pred             HHHHHHHhcCCCccccCCHHHHHHHHHcCCc--C----------------------------------------------
Confidence            99999999 8999988766554443322100  0                                              


Q ss_pred             hhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       388 ~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      .....++..+.+||.+||+.||++|||+.|+++|
T Consensus       260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          260 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            0112456678999999999999999999999986

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=6.5e-45  Score=336.25  Aligned_cols=244  Identities=15%  Similarity=0.158  Sum_probs=197.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC--
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR--  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~--  168 (432)
                      .++|++.+.||+|+||.||+|++.  ++.||||+++..   ......+.+|+.++..++|     +||+++++++...  
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~   81 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH-----PNVLPVLGACQSPPA   81 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSC-----TTEECEEEEECTTTS
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCC-----CchhheEEEEccCCC
Confidence            468999999999999999999875  889999999743   2344567888888887765     9999999998876  


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cEeccCCCCcEEeecCCccccCCccccc
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      +..++||||+ +++|.+++.......+++..++.++.||+.||.|||++|  |+||||||+|||++.             
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~-------------  148 (271)
T 3kmu_A           82 PHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE-------------  148 (271)
T ss_dssp             SSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECT-------------
T ss_pred             CCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcC-------------
Confidence            7899999999 889999998866446999999999999999999999999  999999999999654             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCc---cchHHHHHHHHHHHHhCCCCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSY---PCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDiwSlGvil~elltg~~pf~  322 (432)
                                    ++.++|+|||++....  .....||+.|+|||++.+..++.   ++|||||||++|+|++|..||.
T Consensus       149 --------------~~~~~l~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  212 (271)
T 3kmu_A          149 --------------DMTARISMADVKFSFQ--SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFA  212 (271)
T ss_dssp             --------------TSCEEEEGGGSCCTTS--CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTT
T ss_pred             --------------CcceeEEeccceeeec--ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence                          4456666666543322  23346899999999999865544   7999999999999999999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.+..+....+.......                                               ..+..+++.+.+||.
T Consensus       213 ~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~li~  245 (271)
T 3kmu_A          213 DLSNMEIGMKVALEGLRP-----------------------------------------------TIPPGISPHVSKLMK  245 (271)
T ss_dssp             TSCHHHHHHHHHHSCCCC-----------------------------------------------CCCTTCCHHHHHHHH
T ss_pred             ccChHHHHHHHHhcCCCC-----------------------------------------------CCCCCCCHHHHHHHH
Confidence            877655544332211100                                               011345677899999


Q ss_pred             HccccCCCCCCCHHHHhc
Q 047395          403 GLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~  420 (432)
                      +||+.||++|||++|+++
T Consensus       246 ~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          246 ICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCChhhCcCHHHHHH
Confidence            999999999999999985

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=6.6e-45  Score=338.00  Aligned_cols=248  Identities=24%  Similarity=0.340  Sum_probs=201.3

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +...++|++.+.||+|+||.||+|.+. +++.||||+++......+.+.+|++++..+.|     +||+++++++.. +.
T Consensus         9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~-~~   81 (279)
T 1qpc_A            9 EVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----QRLVRLYAVVTQ-EP   81 (279)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC-----TTBCCEEEEECS-SS
T ss_pred             ccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCC-----cCcceEEEEEcC-CC
Confidence            344678999999999999999999975 56789999998665556788899999999876     999999998874 56


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      .++||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.                 
T Consensus        82 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~-----------------  144 (279)
T 1qpc_A           82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD-----------------  144 (279)
T ss_dssp             CEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-----------------
T ss_pred             cEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcC-----------------
Confidence            89999999 899999997543235999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH  324 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~  324 (432)
                                ++.++|+|||.+.......    ....+|..|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus       145 ----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  214 (279)
T 1qpc_A          145 ----------TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM  214 (279)
T ss_dssp             ----------TSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             ----------CCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc
Confidence                      4557777777665543221    22356788999999998889999999999999999999 99999887


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+....+......                                                .....++..+.+||.+|
T Consensus       215 ~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~~li~~~  246 (279)
T 1qpc_A          215 TNPEVIQNLERGYRM------------------------------------------------VRPDNCPEELYQLMRLC  246 (279)
T ss_dssp             CHHHHHHHHHTTCCC------------------------------------------------CCCTTCCHHHHHHHHHH
T ss_pred             CHHHHHHHHhcccCC------------------------------------------------CCcccccHHHHHHHHHH
Confidence            765554433221100                                                01124566789999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 047395          405 LRYDPSSRLTAHDALK  420 (432)
Q Consensus       405 L~~dP~~R~ta~elL~  420 (432)
                      |..||++|||++++++
T Consensus       247 l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          247 WKERPEDRPTFDYLRS  262 (279)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             hccChhhCCCHHHHHH
Confidence            9999999999999875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=7.4e-45  Score=339.54  Aligned_cols=253  Identities=22%  Similarity=0.333  Sum_probs=191.2

Q ss_pred             ecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc
Q 047395           88 ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW  164 (432)
Q Consensus        88 ~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~  164 (432)
                      ..++...++|++.++||+|+||+||+|++..   .||+|+++..   ....+.+.+|+.+++.++|     +||++++++
T Consensus        17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~   88 (289)
T 3og7_A           17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH-----VNILLFMGY   88 (289)
T ss_dssp             -CCBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCC-----TTBCCEEEE
T ss_pred             CCCccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCC-----CcEEEEEee
Confidence            3456778899999999999999999998643   5999998642   3344668889999888876     999999996


Q ss_pred             cccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          165 FDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       165 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                      . .....++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++         
T Consensus        89 ~-~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~---------  157 (289)
T 3og7_A           89 S-TAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDN---------  157 (289)
T ss_dssp             E-CSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTT---------
T ss_pred             c-cCCccEEEEEecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCC---------
Confidence            5 456689999999 899999997554 4699999999999999999999999999999999999976544         


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHh---CCCCCccchHHHHHHHHHHHH
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~---~~~~~~~sDiwSlGvil~ell  315 (432)
                                        .++|+|||++.....     ......||+.|+|||++.   +..++.++|||||||++|+|+
T Consensus       158 ------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~  219 (289)
T 3og7_A          158 ------------------TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM  219 (289)
T ss_dssp             ------------------EEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHH
T ss_pred             ------------------CEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHH
Confidence                              456666665543221     123356899999999997   556888999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchH
Q 047395          316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG  395 (432)
Q Consensus       316 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (432)
                      +|..||......+....+.......+.                                           .......+++
T Consensus       220 ~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~  256 (289)
T 3og7_A          220 TGQLPYSNINNRDQIIEMVGRGSLSPD-------------------------------------------LSKVRSNCPK  256 (289)
T ss_dssp             HSSCTTSSCCCHHHHHHHHHHTSCCCC-------------------------------------------TTSSCTTSCH
T ss_pred             HCCCCccccchHHHHHHHhcccccCcc-------------------------------------------hhhccccCCH
Confidence            999999887665544443322111110                                           0011234567


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q 047395          396 YLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       396 ~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      .+.+||.+||+.||.+|||+.|+++
T Consensus       257 ~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          257 RMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHH
Confidence            7999999999999999999999985

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=7.7e-46  Score=344.98  Aligned_cols=249  Identities=26%  Similarity=0.343  Sum_probs=201.3

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--  167 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--  167 (432)
                      +..+.++|++.+.||+|+||.||+|++..+++.||+|+++...   +.+.+|+.++..++|     +||+++++++..  
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h-----~~i~~~~~~~~~~~   77 (284)
T 2a19_B            6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDH-----VNIVHYNGCWDGFD   77 (284)
T ss_dssp             CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCC-----TTBCCEEEEEEEEE
T ss_pred             cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCC-----CCEEEEeeeEeccc
Confidence            4567789999999999999999999999999999999987542   457789999999876     999999998753  


Q ss_pred             --------------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec
Q 047395          168 --------------RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       168 --------------~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  232 (432)
                                    ...+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  157 (284)
T 2a19_B           78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD  157 (284)
T ss_dssp             EC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred             cCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcC
Confidence                          45689999999 789999998764457999999999999999999999999999999999999765


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHH
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI  310 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvi  310 (432)
                      ++                           .++|+|||++......  .....||+.|+|||++.+..++.++|||||||+
T Consensus       158 ~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  210 (284)
T 2a19_B          158 TK---------------------------QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI  210 (284)
T ss_dssp             TT---------------------------EEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHH
T ss_pred             CC---------------------------CEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHH
Confidence            44                           4666666666543322  233568999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhc
Q 047395          311 LIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV  390 (432)
Q Consensus       311 l~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (432)
                      +|+|++|..||....  .....+..  +                                                 ...
T Consensus       211 l~~l~~~~~~~~~~~--~~~~~~~~--~-------------------------------------------------~~~  237 (284)
T 2a19_B          211 LAELLHVCDTAFETS--KFFTDLRD--G-------------------------------------------------IIS  237 (284)
T ss_dssp             HHHHHSCCSSHHHHH--HHHHHHHT--T-------------------------------------------------CCC
T ss_pred             HHHHHhcCCcchhHH--HHHHHhhc--c-------------------------------------------------ccc
Confidence            999999998874211  00000000  0                                                 001


Q ss_pred             ccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       391 ~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ..++..+.+||.+||+.||.+|||+.|+++|.|.-.
T Consensus       238 ~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          238 DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            234566889999999999999999999999877644

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=3.5e-45  Score=353.80  Aligned_cols=246  Identities=22%  Similarity=0.305  Sum_probs=192.1

Q ss_pred             cCceEEEeeeecccceEEEEEEec---CCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR---ETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~---~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|++.+.||+|+||.||+|++.   .++..||||+++..  ......+.+|+.++..++|     +||+++++++...
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~niv~~~~~~~~~  118 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH-----PNIIRLEGVVTKS  118 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEECSS
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCC-----CCCCeEEEEEeeC
Confidence            468999999999999999999877   45778999998743  3445678899999988876     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.+              
T Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--------------  183 (373)
T 2qol_A          119 KPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------------  183 (373)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--------------
T ss_pred             CceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCC--------------
Confidence            9999999999 999999998754 469999999999999999999999999999999999997554              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCc------cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                   +.+||+|||++.......      ....+|+.|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       184 -------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P  250 (373)
T 2qol_A          184 -------------LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP  250 (373)
T ss_dssp             -------------CCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CT
T ss_pred             -------------CCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCC
Confidence                         456666666655432211      11235778999999999999999999999999999998 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...+..+....+.......                                                ....++..+.+|
T Consensus       251 ~~~~~~~~~~~~i~~~~~~~------------------------------------------------~~~~~~~~l~~l  282 (373)
T 2qol_A          251 YWEMSNQDVIKAVDEGYRLP------------------------------------------------PPMDCPAALYQL  282 (373)
T ss_dssp             TTTCCHHHHHHHHHTTEECC------------------------------------------------CCTTCBHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCC------------------------------------------------CCccccHHHHHH
Confidence            98877655544432211100                                                012456678999


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      |.+||+.||++|||+.|+++
T Consensus       283 i~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          283 MLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhCcChhhCcCHHHHHH
Confidence            99999999999999999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.3e-45  Score=342.93  Aligned_cols=247  Identities=23%  Similarity=0.319  Sum_probs=191.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++.+.||+|+||.||+|++..+++.||||+++...    ...+.+.+|+.++..+.|     +||+++++++...+
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----p~iv~~~~~~~~~~  107 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQE-----PHVVPIHDFGEIDG  107 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEEEETT
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCC-----CCeeEEEEEEeeCC
Confidence            468999999999999999999999999999999987532    234667789888888766     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.+               
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~---------------  170 (309)
T 2h34_A          108 QLYVDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSAD---------------  170 (309)
T ss_dssp             EEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT---------------
T ss_pred             eEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCC---------------
Confidence            999999999 789999998764  69999999999999999999999999999999999997544               


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                  +.++|+|||++......    .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       171 ------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  238 (309)
T 2h34_A          171 ------------DFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD  238 (309)
T ss_dssp             ------------SCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred             ------------CCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence                        45666666665543322    22346899999999999988999999999999999999999999875


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +.......+ ....+.+                                             ......++..+.+||.+|
T Consensus       239 ~~~~~~~~~-~~~~~~~---------------------------------------------~~~~~~~~~~l~~li~~~  272 (309)
T 2h34_A          239 QLSVMGAHI-NQAIPRP---------------------------------------------STVRPGIPVAFDAVIARG  272 (309)
T ss_dssp             HHHHHHHHH-HSCCCCG---------------------------------------------GGTSTTCCTHHHHHHHHH
T ss_pred             hHHHHHHHh-ccCCCCc---------------------------------------------cccCCCCCHHHHHHHHHh
Confidence            543222111 1100000                                             011234566789999999


Q ss_pred             cccCCCCCC-CHHHHhc
Q 047395          405 LRYDPSSRL-TAHDALK  420 (432)
Q Consensus       405 L~~dP~~R~-ta~elL~  420 (432)
                      |+.||++|| |++++++
T Consensus       273 l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          273 MAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             TCSSGGGSCSSHHHHHH
T ss_pred             ccCCHHHHHHhHHHHHH
Confidence            999999999 8888875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=8.5e-45  Score=346.07  Aligned_cols=249  Identities=19%  Similarity=0.300  Sum_probs=198.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCc-----EEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeecc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNW  164 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~-----~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~  164 (432)
                      ..++|++.+.||+|+||.||+|.+..+++     .||+|+++..  ....+.+.+|+.++..+ .|     +||++++++
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----~~iv~~~~~  118 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH-----ENIVNLLGA  118 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCC-----TTBCCEEEE
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCC-----CCeeeEEEE
Confidence            35789999999999999999999877664     7999999753  23456788999999999 56     999999999


Q ss_pred             cccCCeEEEEEccC-CCCHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEee
Q 047395          165 FDYRNHICIVFEML-GPSLYDFLRKNN------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFV  231 (432)
Q Consensus       165 ~~~~~~~~lv~e~~-~~~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  231 (432)
                      +...+.+|+||||+ +++|.+++....            ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus       119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT  198 (333)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred             EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence            99999999999999 889999998642            23589999999999999999999999999999999999987


Q ss_pred             cCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHH
Q 047395          232 SPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWS  306 (432)
Q Consensus       232 ~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwS  306 (432)
                      .++.+||+|||+                           +......     .....||+.|+|||++.+..++.++||||
T Consensus       199 ~~~~~kl~Dfg~---------------------------~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  251 (333)
T 2i1m_A          199 NGHVAKIGDFGL---------------------------ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS  251 (333)
T ss_dssp             GGGEEEBCCCGG---------------------------GCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHH
T ss_pred             CCCeEEECcccc---------------------------ccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHH
Confidence            665555555554                           4322111     12235688899999999989999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhh
Q 047395          307 VGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL  385 (432)
Q Consensus       307 lGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (432)
                      |||++|+|++ |..||.+.........+.......+                                            
T Consensus       252 lG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------------------------  287 (333)
T 2i1m_A          252 YGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA--------------------------------------------  287 (333)
T ss_dssp             HHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCC--------------------------------------------
T ss_pred             HHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCC--------------------------------------------
Confidence            9999999998 9999987655443333222111100                                            


Q ss_pred             hhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       386 ~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                         .....+..+.+||.+||+.||.+|||+.|+++
T Consensus       288 ---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          288 ---QPAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---CCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence               01234566889999999999999999999986

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.6e-44  Score=335.91  Aligned_cols=246  Identities=23%  Similarity=0.330  Sum_probs=196.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecC---CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE---TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~---~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|++.+.||+|+||+||+|++..   ++..||+|+++..  ....+.+.+|+.+++.++|     +||+++++++..+
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~   85 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH-----PHIVKLIGIIEEE   85 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCC-----TTBCCEEEEECSS
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCC-----CCcceEEEEEcCC
Confidence            5789999999999999999998654   3456999998753  3445678899999999976     9999999998754


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                       ..|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.            
T Consensus        86 -~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~------------  151 (281)
T 3cc6_A           86 -PTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC------------  151 (281)
T ss_dssp             -SCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTE------------
T ss_pred             -CCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCc------------
Confidence             568999999 899999998764 45999999999999999999999999999999999999876554            


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQ  322 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~  322 (432)
                                     +||+|||++......    .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus       152 ---------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~  216 (281)
T 3cc6_A          152 ---------------VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF  216 (281)
T ss_dssp             ---------------EEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             ---------------EEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcc
Confidence                           555555555433221    122356788999999998899999999999999999998 999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      .....+....+.......                                                ....+++.+.+||.
T Consensus       217 ~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~l~~li~  248 (281)
T 3cc6_A          217 WLENKDVIGVLEKGDRLP------------------------------------------------KPDLCPPVLYTLMT  248 (281)
T ss_dssp             TSCGGGHHHHHHHTCCCC------------------------------------------------CCTTCCHHHHHHHH
T ss_pred             cCChHHHHHHHhcCCCCC------------------------------------------------CCCCCCHHHHHHHH
Confidence            766655444332221100                                                01235566899999


Q ss_pred             HccccCCCCCCCHHHHhcC
Q 047395          403 GLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~h  421 (432)
                      +||+.||++|||+.|++++
T Consensus       249 ~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          249 RCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHccCCchhCcCHHHHHHH
Confidence            9999999999999999864

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=8.3e-45  Score=346.31  Aligned_cols=260  Identities=25%  Similarity=0.357  Sum_probs=177.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHH-hcCCCCCceeEeeccc------
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLK-RYDRSGSRCVQIRNWF------  165 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~-~~~~~~~~iv~~~~~~------  165 (432)
                      ..+|++.+.||+|+||.||+|++..+++.||||++... ......+.+|+.++..+. |     +||+++++++      
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h-----~~iv~~~~~~~~~~~~  101 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGH-----PNIVQFCSAASIGKEE  101 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTS-----TTBCCEEEEEEECTTT
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccC-----CChhhccccccccccc
Confidence            45899999999999999999999999999999988543 344567888999999996 5     9999999887      


Q ss_pred             --ccCCeEEEEEccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--cEeccCCCCcEEeecCCccccCC
Q 047395          166 --DYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       166 --~~~~~~~lv~e~~~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                        .....+++||||++++|.+++... ....+++..++.++.||+.||.|||++|  |+||||||+|||++.++.+||+|
T Consensus       102 ~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~D  181 (337)
T 3ll6_A          102 SDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD  181 (337)
T ss_dssp             STTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred             cccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEec
Confidence              345678999999999999998752 2246999999999999999999999999  99999999999987666555555


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHH---hCCCCCccchHHHHHHHHHHHHhC
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDiwSlGvil~elltg  317 (432)
                      ||++...........            -..............||+.|+|||++   .+..++.++|||||||++|+|++|
T Consensus       182 fg~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g  249 (337)
T 3ll6_A          182 FGSATTISHYPDYSW------------SAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFR  249 (337)
T ss_dssp             CTTCBCCSSCC-------------------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHS
T ss_pred             CccceeccccCcccc------------cccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhC
Confidence            555432211100000            00000000111234689999999999   566788999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ..||...........   ..                        ..+                        .....+..+
T Consensus       250 ~~p~~~~~~~~~~~~---~~------------------------~~~------------------------~~~~~~~~~  278 (337)
T 3ll6_A          250 QHPFEDGAKLRIVNG---KY------------------------SIP------------------------PHDTQYTVF  278 (337)
T ss_dssp             SCCC---------------C------------------------CCC------------------------TTCCSSGGG
T ss_pred             CCCCcchhHHHhhcC---cc------------------------cCC------------------------cccccchHH
Confidence            999975433211100   00                        000                        012233447


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcC
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      .+||.+||+.||++|||+.|+++|
T Consensus       279 ~~li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          279 HSLIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHH
Confidence            899999999999999999999976

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.5e-45  Score=346.11  Aligned_cols=258  Identities=21%  Similarity=0.281  Sum_probs=190.0

Q ss_pred             eeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           86 LFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        86 ~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      +...+..+.++|++.+.||+|+||.||+|++.  ++.||||++.....  .....|.+++..+   ...|+||+++++++
T Consensus        28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~--~~~~~e~~~~~~~---~~~h~~i~~~~~~~  100 (337)
T 3mdy_A           28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE--ASWFRETEIYQTV---LMRHENILGFIAAD  100 (337)
T ss_dssp             CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGH--HHHHHHHHHHTST---TCCCTTBCCEEEEE
T ss_pred             CcccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecccc--chhhhHHHHHHHH---hhcCCCeeeEEEEE
Confidence            34455677889999999999999999999875  89999999865433  2334454444333   12459999999998


Q ss_pred             ccC----CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcEeccCCCCcEEeec
Q 047395          166 DYR----NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL--------RLIHTDLKPENILFVS  232 (432)
Q Consensus       166 ~~~----~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlkp~NIli~~  232 (432)
                      ...    ..+|+||||+ +++|.+++...   .+++..++.++.||+.||.|||++        ||+||||||+|||++.
T Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~  177 (337)
T 3mdy_A          101 IKGTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK  177 (337)
T ss_dssp             EESCGGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred             ccCCCCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC
Confidence            766    7899999999 88999999875   499999999999999999999998        9999999999999654


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-------ccccccCCCcchhHHHhCCCCCcc----
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-------HNYIVSTRHYRAPEVILGLGWSYP----  301 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~----  301 (432)
                                                 ++.+||+|||++......       ....+||+.|+|||++.+...+..    
T Consensus       178 ---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  230 (337)
T 3mdy_A          178 ---------------------------NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSY  230 (337)
T ss_dssp             ---------------------------TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHH
T ss_pred             ---------------------------CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCc
Confidence                                       445667777766443221       123579999999999988776655    


Q ss_pred             --chHHHHHHHHHHHHhC----------CCCCCCCCc----HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCC
Q 047395          302 --CDMWSVGCILIELCSG----------EALFQTHEN----LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE  365 (432)
Q Consensus       302 --sDiwSlGvil~elltg----------~~pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  365 (432)
                        +|||||||++|||++|          ..||.....    .............                    ...++ 
T Consensus       231 ~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~-  289 (337)
T 3mdy_A          231 IMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKL--------------------RPSFP-  289 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC--------------------CCCCC-
T ss_pred             cccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhcc--------------------Ccccc-
Confidence              9999999999999999          555543211    1111100000000                    00000 


Q ss_pred             CCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          366 GATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                                          .....+.+++.+.+||.+||+.||++|||+.|+++|
T Consensus       290 --------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          290 --------------------NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             --------------------GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             --------------------ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                                001123556779999999999999999999999875

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-44  Score=342.65  Aligned_cols=248  Identities=21%  Similarity=0.292  Sum_probs=195.7

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCC----cEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETG----ETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~----~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ..++|++.+.||+|+||.||+|.+..++    ..||||+++..  ......+.+|+.++..+.|     +||+++++++.
T Consensus        42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~  116 (333)
T 1mqb_A           42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH-----HNIIRLEGVIS  116 (333)
T ss_dssp             CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEEC
T ss_pred             ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC-----CCCCcEEEEEe
Confidence            3578999999999999999999987553    45999999743  3344567889999988876     99999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      ..+..++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+            
T Consensus       117 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~------------  183 (333)
T 1mqb_A          117 KYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN------------  183 (333)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT------------
T ss_pred             cCCCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCC------------
Confidence            999999999999 889999998754 469999999999999999999999999999999999997544            


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCCc------cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GE  318 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~  318 (432)
                                     +.+||+|||++.......      ....+|+.|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       184 ---------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  248 (333)
T 1mqb_A          184 ---------------LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE  248 (333)
T ss_dssp             ---------------CCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ---------------CcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCC
Confidence                           456666666665432211      12245778999999999999999999999999999999 99


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||...+..+....+......                                                .....++..+.
T Consensus       249 ~pf~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~  280 (333)
T 1mqb_A          249 RPYWELSNHEVMKAINDGFRL------------------------------------------------PTPMDCPSAIY  280 (333)
T ss_dssp             CTTTTCCHHHHHHHHHTTCCC------------------------------------------------CCCTTCBHHHH
T ss_pred             CCcccCCHHHHHHHHHCCCcC------------------------------------------------CCcccCCHHHH
Confidence            999877665554433221100                                                00124566789


Q ss_pred             HHHHHccccCCCCCCCHHHHhcC
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      +||.+||+.||++|||+.+++++
T Consensus       281 ~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          281 QLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999998853

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=2.3e-45  Score=349.15  Aligned_cols=258  Identities=24%  Similarity=0.375  Sum_probs=178.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHH-HHHHHHhcCCCCCceeEeecccccCCe
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEID-VLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~-~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++...  .....+..|+. +++.+     .|+||+++++++...+.
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~-----~h~niv~~~~~~~~~~~   95 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS-----DCPYIVQFYGALFREGD   95 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSC-----CCTTBCCEEEEEECSSE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcC-----CCCcEeeeeeEEEeCCc
Confidence            478999999999999999999999999999999997532  22333444444 33333     45999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          171 ICIVFEMLGPSLYDFLRK---NNYRPFPVDLVREIGRQLLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       171 ~~lv~e~~~~~L~~~l~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .++||||+.++|.+++..   .....+++..+..++.|++.||.|||++ ||+||||||+|||++.++            
T Consensus        96 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~------------  163 (327)
T 3aln_A           96 CWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSG------------  163 (327)
T ss_dssp             EEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTT------------
T ss_pred             eEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCC------------
Confidence            999999998899888874   1234699999999999999999999998 999999999999976544            


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHH----hCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~----~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                     .+||+|||++......  .....||+.|+|||++    .+..++.++|||||||++|+|++|..|
T Consensus       164 ---------------~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p  228 (327)
T 3aln_A          164 ---------------NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP  228 (327)
T ss_dssp             ---------------EEEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCC
T ss_pred             ---------------CEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCC
Confidence                           4666666665543222  2224689999999999    455689999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |........  .+.                   .........++                      ......+++.+.+|
T Consensus       229 f~~~~~~~~--~~~-------------------~~~~~~~~~~~----------------------~~~~~~~~~~l~~l  265 (327)
T 3aln_A          229 YPKWNSVFD--QLT-------------------QVVKGDPPQLS----------------------NSEEREFSPSFINF  265 (327)
T ss_dssp             SSCC---------C-------------------CCCCSCCCCCC----------------------CCSSCCCCHHHHHH
T ss_pred             CCCcchHHH--HHH-------------------HHhcCCCCCCC----------------------CcccccCCHHHHHH
Confidence            976432110  000                   00000000000                      01113456779999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      |.+||+.||++|||+.|+++||||.+
T Consensus       266 i~~~l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          266 VNLCLTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             HHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHHhhCChhhCcCHHHHHhChHHHH
Confidence            99999999999999999999999965

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=6.3e-45  Score=360.94  Aligned_cols=254  Identities=26%  Similarity=0.330  Sum_probs=203.2

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +...++|++.++||+|+||.||+|.+.. +..||||+++......+.+.+|+.+++.++|     +||+++++++.. +.
T Consensus       180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~~-~~  252 (452)
T 1fmk_A          180 EIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQLYAVVSE-EP  252 (452)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCC-----TTBCCEEEEECS-SS
T ss_pred             ccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCC-----CCEeeEEEEEcC-Cc
Confidence            3446789999999999999999999865 4679999998655556788999999999977     999999999876 67


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.+                
T Consensus       253 ~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~----------------  316 (452)
T 1fmk_A          253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN----------------  316 (452)
T ss_dssp             CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG----------------
T ss_pred             eEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCC----------------
Confidence            89999999 8999999986433469999999999999999999999999999999999997544                


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH  324 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~  324 (432)
                                 +.+||+|||++......    .....+|..|+|||++.+..++.++|||||||++|||++ |..||.+.
T Consensus       317 -----------~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~  385 (452)
T 1fmk_A          317 -----------LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM  385 (452)
T ss_dssp             -----------GCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             -----------CCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence                       45666666666543221    122346788999999999899999999999999999999 99999887


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      ...+....+......                                                ..+..+++.+.+||.+|
T Consensus       386 ~~~~~~~~i~~~~~~------------------------------------------------~~~~~~~~~l~~li~~c  417 (452)
T 1fmk_A          386 VNREVLDQVERGYRM------------------------------------------------PCPPECPESLHDLMCQC  417 (452)
T ss_dssp             CHHHHHHHHHTTCCC------------------------------------------------CCCTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCC------------------------------------------------CCCCCCCHHHHHHHHHH
Confidence            766655444322110                                                01124566789999999


Q ss_pred             cccCCCCCCCHHHHhc--CCCCCC
Q 047395          405 LRYDPSSRLTAHDALK--HPFFTR  426 (432)
Q Consensus       405 L~~dP~~R~ta~elL~--hp~f~~  426 (432)
                      |+.||++|||++++++  ..++..
T Consensus       418 l~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          418 WRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             TCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             ccCChhhCcCHHHHHHHHHHHhcc
Confidence            9999999999999987  466654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=9.2e-45  Score=344.92  Aligned_cols=245  Identities=21%  Similarity=0.297  Sum_probs=192.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEE----EEEEeec--hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETV----AIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~v----aiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .++|++++.||+|+||+||+|++..+++.|    |+|.+..  .......+.+|+.++..++|     +||+++++++..
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~~   88 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN-----PHVCRLLGICLT   88 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCB-----TTBCCCCEEEES
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCC-----CCeeEEEEEEec
Confidence            478999999999999999999998888765    6666542  22345678889999988876     999999999987


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .. .++|+|++ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++            
T Consensus        89 ~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~------------  154 (327)
T 3lzb_A           89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ------------  154 (327)
T ss_dssp             SS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT------------
T ss_pred             CC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCC------------
Confidence            65 77888888 999999998764 4699999999999999999999999999999999999986654            


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                     .+||+|||++......     .....+|+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       155 ---------------~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p  219 (327)
T 3lzb_A          155 ---------------HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  219 (327)
T ss_dssp             ---------------EEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ---------------CEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCC
Confidence                           4566666655443221     122346788999999999999999999999999999999 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+..+....+......                                                .....++..+.+|
T Consensus       220 ~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~~l  251 (327)
T 3lzb_A          220 YDGIPASEISSILEKGERL------------------------------------------------PQPPICTIDVYMI  251 (327)
T ss_dssp             TTTCCGGGHHHHHHTTCCC------------------------------------------------CCCTTBCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCC------------------------------------------------CCCccCCHHHHHH
Confidence            9887665544333221100                                                0112456678999


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      |.+||+.||.+|||+.|+++
T Consensus       252 i~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          252 MRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999985

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-44  Score=337.13  Aligned_cols=246  Identities=24%  Similarity=0.308  Sum_probs=197.9

Q ss_pred             cCceEEEe-eeecccceEEEEEEec--CCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILR-KIGEGTFGQVLDCLDR--ETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~-~lg~G~~g~V~~a~~~--~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|.+.+ .||+|+||.||+|.+.  .+++.||||+++..  ....+.+.+|+.++..+.|     +||+++++++. .
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~-~   81 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN-----PYIVRLIGVCQ-A   81 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCC-----TTBCCEEEEEE-S
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCC-----CCEeEEEEEec-C
Confidence            46788887 9999999999999864  46788999999753  3455678899999999876     99999999994 5


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +..++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++             
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~-------------  147 (287)
T 1u59_A           82 EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH-------------  147 (287)
T ss_dssp             SSEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT-------------
T ss_pred             CCcEEEEEeCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCC-------------
Confidence            6699999999 889999997543 4699999999999999999999999999999999999987654             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                    .++|+|||++......      .....+|+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       148 --------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  213 (287)
T 1u59_A          148 --------------YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP  213 (287)
T ss_dssp             --------------EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             --------------CEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence                          4556666655443221      122346889999999998889999999999999999998 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...+..+....+......                                                ..+..+++.+.+|
T Consensus       214 ~~~~~~~~~~~~i~~~~~~------------------------------------------------~~~~~~~~~l~~l  245 (287)
T 1u59_A          214 YKKMKGPEVMAFIEQGKRM------------------------------------------------ECPPECPPELYAL  245 (287)
T ss_dssp             TTTCCTHHHHHHHHTTCCC------------------------------------------------CCCTTCCHHHHHH
T ss_pred             cccCCHHHHHHHHhcCCcC------------------------------------------------CCCCCcCHHHHHH
Confidence            9887766554443221100                                                0112456778999


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 047395          401 LQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~h  421 (432)
                      |.+||+.||++|||+.++++|
T Consensus       246 i~~~l~~~p~~Rps~~~l~~~  266 (287)
T 1u59_A          246 MSDCWIYKWEDRPDFLTVEQR  266 (287)
T ss_dssp             HHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999976

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=7.2e-45  Score=345.71  Aligned_cols=248  Identities=22%  Similarity=0.296  Sum_probs=197.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEE--EEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETV--AIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~v--aiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|++.+.||+|+||.||+|++..++..+  |+|.++..  ......+.+|+.++..+ .|     +||+++++++...
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h-----p~iv~~~~~~~~~   98 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH-----PNIINLLGACEHR   98 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCC-----TTBCCEEEEEEET
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCC-----CchhhhceeeeeC
Confidence            368999999999999999999999888865  99988642  23445678899988887 44     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNN--------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSP  233 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~  233 (432)
                      +.+|+||||+ +++|.+++....              ...+++..++.++.||+.||.|||++||+||||||+|||++. 
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-  177 (327)
T 1fvr_A           99 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE-  177 (327)
T ss_dssp             TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG-
T ss_pred             CceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcC-
Confidence            9999999999 899999998643              236999999999999999999999999999999999999654 


Q ss_pred             CccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHHHHH
Q 047395          234 EYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL  311 (432)
Q Consensus       234 ~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil  311 (432)
                                                ++.+||+|||++.....  ......+|+.|+|||++.+..++.++|||||||++
T Consensus       178 --------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  231 (327)
T 1fvr_A          178 --------------------------NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL  231 (327)
T ss_dssp             --------------------------GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred             --------------------------CCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHH
Confidence                                      44567777776653222  12233568899999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhc
Q 047395          312 IELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV  390 (432)
Q Consensus       312 ~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (432)
                      |+|++ |..||.+.+..+....+.....                                                ....
T Consensus       232 ~ellt~g~~pf~~~~~~~~~~~~~~~~~------------------------------------------------~~~~  263 (327)
T 1fvr_A          232 WEIVSLGGTPYCGMTCAELYEKLPQGYR------------------------------------------------LEKP  263 (327)
T ss_dssp             HHHHTTSCCTTTTCCHHHHHHHGGGTCC------------------------------------------------CCCC
T ss_pred             HHHHcCCCCCCCCCcHHHHHHHhhcCCC------------------------------------------------CCCC
Confidence            99998 9999987765544333211100                                                0011


Q ss_pred             ccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       391 ~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      ..+++.+.+||.+||+.||++|||+.|++++
T Consensus       264 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          264 LNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            2456678999999999999999999999864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=3.9e-44  Score=338.05  Aligned_cols=252  Identities=27%  Similarity=0.410  Sum_probs=191.6

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec----hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      +....++|++.+.||+|+||.||+|.+..+++.||||+++.    .......+.+|+.+++.++|     +||+++++++
T Consensus        27 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~  101 (310)
T 2wqm_A           27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH-----PNVIKYYASF  101 (310)
T ss_dssp             TTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEE
T ss_pred             ccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCC-----CCEeeEEEEE
Confidence            44556789999999999999999999999999999999874    23445677889999988876     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ...+..++||||+ +++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.          
T Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~----------  171 (310)
T 2wqm_A          102 IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA----------  171 (310)
T ss_dssp             EETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT----------
T ss_pred             EcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcC----------
Confidence            9999999999999 88999999752  2346999999999999999999999999999999999999654          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                       ++.++|+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       172 -----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~  234 (310)
T 2wqm_A          172 -----------------TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS  234 (310)
T ss_dssp             -----------------TSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             -----------------CCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                             445667777766543322   223468999999999999999999999999999999999999


Q ss_pred             CCCCCCcH--HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          320 LFQTHENL--EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       320 pf~~~~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ||.+....  .....+...  ..+                       .                      .....+++.+
T Consensus       235 p~~~~~~~~~~~~~~~~~~--~~~-----------------------~----------------------~~~~~~~~~l  267 (310)
T 2wqm_A          235 PFYGDKMNLYSLCKKIEQC--DYP-----------------------P----------------------LPSDHYSEEL  267 (310)
T ss_dssp             TTC---CCHHHHHHHHHTT--CSC-----------------------C----------------------CCTTTSCHHH
T ss_pred             CCcccchhHHHHHHHhhcc--cCC-----------------------C----------------------CcccccCHHH
Confidence            99754321  111111110  000                       0                      0012456678


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      .+||.+||..||++|||+.++++
T Consensus       268 ~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          268 RQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCChhhCCCHHHHHH
Confidence            99999999999999999999985

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=1.3e-44  Score=342.09  Aligned_cols=251  Identities=22%  Similarity=0.307  Sum_probs=197.3

Q ss_pred             ecCceEEEeeeecccceEEEEEEe-----cCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLD-----RETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      ..++|++.+.||+|+||+||+|++     ..+++.||||+++...  .....+.+|+.++..+.+    |+||+++++++
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~----hp~iv~~~~~~  100 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH----HLNVVNLLGAC  100 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC----CTTBCCEEEEE
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhccc----CCCeeeEEEEE
Confidence            357899999999999999999985     4567899999997532  334568899999999843    39999999997


Q ss_pred             ccC-CeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEE
Q 047395          166 DYR-NHICIVFEML-GPSLYDFLRKNNY--------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL  229 (432)
Q Consensus       166 ~~~-~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  229 (432)
                      ... ..+++||||+ +++|.+++.....              ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil  180 (316)
T 2xir_A          101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  180 (316)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEE
Confidence            764 4699999999 8899999987542              12889999999999999999999999999999999999


Q ss_pred             eecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchH
Q 047395          230 FVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDM  304 (432)
Q Consensus       230 i~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDi  304 (432)
                      ++.++                           .+||+|||++......     .....||+.|+|||++.+..++.++||
T Consensus       181 ~~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di  233 (316)
T 2xir_A          181 LSEKN---------------------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV  233 (316)
T ss_dssp             ECGGG---------------------------CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             ECCCC---------------------------CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHH
Confidence            76544                           4566666655433221     123457889999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhh
Q 047395          305 WSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ  383 (432)
Q Consensus       305 wSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (432)
                      |||||++|+|++ |..||.+....+............                                           
T Consensus       234 ~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~-------------------------------------------  270 (316)
T 2xir_A          234 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-------------------------------------------  270 (316)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCC-------------------------------------------
T ss_pred             HHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccC-------------------------------------------
Confidence            999999999998 999998765433322221111000                                           


Q ss_pred             hhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       384 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                          .....+++.+.++|.+||+.||.+|||+.|+++|
T Consensus       271 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          271 ----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                0112345668999999999999999999999975

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=4e-45  Score=339.40  Aligned_cols=244  Identities=24%  Similarity=0.346  Sum_probs=190.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc-cCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD-YRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~-~~~~~~  172 (432)
                      .++|++.+.||+|+||+||+|.+.  ++.||||+++... ..+.+.+|+.++..++|     +||+++++++. ..+..|
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~~~   91 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRH-----SNLVQLLGVIVEEKGGLY   91 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC---HHHHHTHHHHTTCCC-----TTBCCEEEEECCC--CCE
T ss_pred             hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh-HHHHHHHHHHHHHhCCC-----CCEeeEEEEEEcCCCceE
Confidence            468999999999999999999874  8899999997543 45668889999888876     99999999864 445799


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.                   
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~-------------------  152 (278)
T 1byg_A           92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE-------------------  152 (278)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT-------------------
T ss_pred             EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeC-------------------
Confidence            999999 789999998754334899999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHL  330 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~  330 (432)
                              ++.++|+|||++...........+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+..+..
T Consensus       153 --------~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~  224 (278)
T 1byg_A          153 --------DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV  224 (278)
T ss_dssp             --------TSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH
T ss_pred             --------CCcEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence                    456777888877665554445567899999999999899999999999999999998 99999876554433


Q ss_pred             HHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCC
Q 047395          331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPS  410 (432)
Q Consensus       331 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  410 (432)
                      ..+.....                                                ......+++.+.++|.+||+.||+
T Consensus       225 ~~~~~~~~------------------------------------------------~~~~~~~~~~l~~li~~~l~~~p~  256 (278)
T 1byg_A          225 PRVEKGYK------------------------------------------------MDAPDGCPPAVYEVMKNCWHLDAA  256 (278)
T ss_dssp             HHHTTTCC------------------------------------------------CCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHhcCCC------------------------------------------------CCCcccCCHHHHHHHHHHhcCChh
Confidence            32211100                                                011234567789999999999999


Q ss_pred             CCCCHHHHhc
Q 047395          411 SRLTAHDALK  420 (432)
Q Consensus       411 ~R~ta~elL~  420 (432)
                      +|||+.|+++
T Consensus       257 ~Rps~~~l~~  266 (278)
T 1byg_A          257 MRPSFLQLRE  266 (278)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCCCHHHHHH
Confidence            9999999875

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=9.8e-45  Score=340.42  Aligned_cols=244  Identities=25%  Similarity=0.468  Sum_probs=188.4

Q ss_pred             ecCceEEE-eeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc----
Q 047395           93 LTSRYKIL-RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY----  167 (432)
Q Consensus        93 ~~~~y~i~-~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~----  167 (432)
                      +.++|.+. +.||+|+||.||+|.+..+++.||||+++..    ....+|+.++..+.    .|+||+++++++..    
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~----~h~~i~~~~~~~~~~~~~   86 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRAS----QCPHIVRIVDVYENLYAG   86 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHT----TSTTBCCEEEEEEEEETT
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhc----cCCCchhHHhhhhhhcCC
Confidence            45667777 7899999999999999999999999999753    34567888774443    24999999999876    


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ...+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++..             
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~-------------  153 (299)
T 3m2w_A           87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-------------  153 (299)
T ss_dssp             EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-------------
T ss_pred             CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecC-------------
Confidence            67899999999 8899999998765679999999999999999999999999999999999998642             


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                 ..++.++|+|||++....                   +..++.++|||||||++|+|++|..||.+...
T Consensus       154 -----------~~~~~~kl~Dfg~a~~~~-------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~  203 (299)
T 3m2w_A          154 -----------RPNAILKLTDFGFAKETT-------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG  203 (299)
T ss_dssp             -----------STTCCEEECCCTTCEECT-------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---
T ss_pred             -----------CCCCcEEEeccccccccc-------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence                       125678999999875432                   23467899999999999999999999976543


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      ......                   .......+...+                      .......+++.+.+||.+||+
T Consensus       204 ~~~~~~-------------------~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~li~~~l~  242 (299)
T 3m2w_A          204 LAISPG-------------------MKTRIRMGQYEF----------------------PNPEWSEVSEEVKMLIRNLLK  242 (299)
T ss_dssp             ----CC-------------------SCCSSCTTCCSS----------------------CHHHHTTSCHHHHHHHHHHTC
T ss_pred             hhhhHH-------------------HHHHHhhccccC----------------------CchhcccCCHHHHHHHHHHcc
Confidence            221100                   000000000000                      011124567889999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCc
Q 047395          407 YDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       407 ~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      .||++|||+.|+|+||||++..
T Consensus       243 ~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          243 TEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             SSTTTSCCHHHHHTSHHHHTGG
T ss_pred             cChhhCCCHHHHhcChhhcccc
Confidence            9999999999999999997654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.9e-44  Score=338.44  Aligned_cols=245  Identities=27%  Similarity=0.369  Sum_probs=189.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .++|++.+.||+|+||+||+|.+.  ++.||||++... ...+.+.+|+.++..++|     +||+++++++.+  ..|+
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h-----p~iv~~~~~~~~--~~~l   76 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE-SERKAFIVELRQLSRVNH-----PNIVKLYGACLN--PVCL   76 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST-THHHHHHHHHHHHHHCCC-----TTBCCEEEBCTT--TTEE
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh-hHHHHHHHHHHHHhcCCC-----CCcCeEEEEEcC--CcEE
Confidence            368999999999999999999875  789999998653 345678899999998876     999999998874  4799


Q ss_pred             EEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          174 VFEML-GPSLYDFLRKNNY-RPFPVDLVREIGRQLLECVAFMHD---LRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ||||+ +++|.+++..... ..+++..+..++.||+.||.|||+   +||+||||||+|||++.++              
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~--------------  142 (307)
T 2eva_A           77 VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG--------------  142 (307)
T ss_dssp             EEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTT--------------
T ss_pred             EEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCC--------------
Confidence            99999 8999999986542 237899999999999999999999   8999999999999976533              


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                  ..+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..||.......
T Consensus       143 ------------~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~  210 (307)
T 2eva_A          143 ------------TVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA  210 (307)
T ss_dssp             ------------TEEEECCCCC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH
T ss_pred             ------------CEEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH
Confidence                        23678888877655544455679999999999999999999999999999999999999997643322


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .........+..+                                              .....++..+.+||.+||+.|
T Consensus       211 ~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~l~~li~~~l~~d  244 (307)
T 2eva_A          211 FRIMWAVHNGTRP----------------------------------------------PLIKNLPKPIESLMTRCWSKD  244 (307)
T ss_dssp             HHHHHHHHTTCCC----------------------------------------------CCBTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHHhcCCCC----------------------------------------------CcccccCHHHHHHHHHHhcCC
Confidence            1111100001000                                              012345667899999999999


Q ss_pred             CCCCCCHHHHhc
Q 047395          409 PSSRLTAHDALK  420 (432)
Q Consensus       409 P~~R~ta~elL~  420 (432)
                      |++|||++++++
T Consensus       245 p~~Rps~~ell~  256 (307)
T 2eva_A          245 PSQRPSMEEIVK  256 (307)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999986

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2.8e-44  Score=337.61  Aligned_cols=263  Identities=24%  Similarity=0.350  Sum_probs=197.4

Q ss_pred             eecCceEEEeeeecccceEEEEEE----ecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCL----DRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~----~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      ....+|++++.||+|+||.||+|+    +..+++.||||+++...  .....+.+|+.++..++|     +||+++++++
T Consensus        18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~   92 (302)
T 4e5w_A           18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH-----ENIVKYKGIC   92 (302)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCC-----TTBCCEEEEE
T ss_pred             hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCC-----CCeeeeeeEE
Confidence            335679999999999999999998    67789999999997433  234678889999998876     9999999998


Q ss_pred             ccC--CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          166 DYR--NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       166 ~~~--~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ...  +.+++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++        
T Consensus        93 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~--------  163 (302)
T 4e5w_A           93 TEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH--------  163 (302)
T ss_dssp             EC---CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT--------
T ss_pred             ecCCCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCC--------
Confidence            766  6799999999 889999997654 4699999999999999999999999999999999999976544        


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt  316 (432)
                                         .++|+|||++......      .....||..|+|||++.+..++.++|||||||++|+|++
T Consensus       164 -------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  224 (302)
T 4e5w_A          164 -------------------QVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT  224 (302)
T ss_dssp             -------------------EEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             -------------------CEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHH
Confidence                               4566666665543322      223467888999999999889999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       317 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      |..|+....     .......++.......                        ..+.....    .......+..+++.
T Consensus       225 g~~p~~~~~-----~~~~~~~~~~~~~~~~------------------------~~~~~~~~----~~~~~~~~~~~~~~  271 (302)
T 4e5w_A          225 YCDSDSSPM-----ALFLKMIGPTHGQMTV------------------------TRLVNTLK----EGKRLPCPPNCPDE  271 (302)
T ss_dssp             TTCGGGSHH-----HHHHHHHCSCCGGGHH------------------------HHHHHHHH----TTCCCCCCTTCCHH
T ss_pred             ccCCCcchh-----hHHhhccCCcccccCH------------------------HHHHHHHh----ccCCCCCCCCCCHH
Confidence            999874321     1122222222211000                        00000000    00001122456778


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhc
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      +.+||.+||+.||.+|||+.|+++
T Consensus       272 l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          272 VYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCCCHHHHHH
Confidence            999999999999999999999985

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=5.7e-46  Score=352.41  Aligned_cols=267  Identities=22%  Similarity=0.279  Sum_probs=200.5

Q ss_pred             CceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        90 ~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+...++|++.+.||+|+||.||+|++. +++.||||++.... ...+.+.+|+.++..++|     +||+++++++...
T Consensus        34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~  107 (321)
T 2qkw_B           34 LEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRH-----PHLVSLIGFCDER  107 (321)
T ss_dssp             CCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCC-----TTBCCEEEECCCT
T ss_pred             HHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEcCC
Confidence            3456789999999999999999999964 68999999886432 334667889988887766     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNY--RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      +..++||||+ +++|.+++.....  ..+++..++.++.||+.||.|||++||+||||||+|||++.             
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~-------------  174 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDE-------------  174 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECT-------------
T ss_pred             CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECC-------------
Confidence            9999999999 8999999875432  25899999999999999999999999999999999999654             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                    ++.+||+|||++......     .....||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       175 --------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p  240 (321)
T 2qkw_B          175 --------------NFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA  240 (321)
T ss_dssp             --------------TCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTT
T ss_pred             --------------CCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCc
Confidence                          455677777766543221     2234689999999999988999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+....+....+....     .  ..........+.      +                   ..........+..+.++
T Consensus       241 ~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~------~-------------------~~~~~~~~~~~~~l~~l  288 (321)
T 2qkw_B          241 IVQSLPREMVNLAEWAV-----E--SHNNGQLEQIVD------P-------------------NLADKIRPESLRKFGDT  288 (321)
T ss_dssp             CSCSSSSSCCCHHHHTH-----H--HHTTTCCCSSSS------S-------------------SCTTCSCHHHHHHHHHH
T ss_pred             ccccCcHHHHHHHHHhh-----h--ccccccHHHhcC------h-------------------hhccccCHHHHHHHHHH
Confidence            97644321110000000     0  000000000000      0                   00001122456678999


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 047395          401 LQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~h  421 (432)
                      |.+||+.||++|||+.|++++
T Consensus       289 i~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          289 AVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCcccCcCHHHHHHH
Confidence            999999999999999999975

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=3e-44  Score=335.80  Aligned_cols=244  Identities=21%  Similarity=0.294  Sum_probs=194.6

Q ss_pred             cCceEEEe-eeecccceEEEEEE--ecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           94 TSRYKILR-KIGEGTFGQVLDCL--DRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        94 ~~~y~i~~-~lg~G~~g~V~~a~--~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .++|++.+ .||+|+||+||+|.  ...+++.||||+++...   ...+.+.+|+.++..+.|     +||+++++++ .
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~-~   88 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN-----PYIVRMIGIC-E   88 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCC-----TTBCCEEEEE-E
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCC-----CCEEEEEEEE-C
Confidence            46899998 99999999999995  45667899999997532   235678889999988876     9999999998 4


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .+..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++            
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~------------  154 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH------------  154 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT------------
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCC------------
Confidence            56789999999 899999998764  699999999999999999999999999999999999987654            


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCCc------cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEA  319 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~  319 (432)
                                     .++|+|||++.......      ....+|+.|+|||++.+..++.++|||||||++|+|++ |..
T Consensus       155 ---------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~  219 (291)
T 1xbb_A          155 ---------------YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK  219 (291)
T ss_dssp             ---------------EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ---------------cEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCC
Confidence                           45556666554432221      12345788999999998889999999999999999999 999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.+..+....+......                                                .....+++.+.+
T Consensus       220 p~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~~  251 (291)
T 1xbb_A          220 PYRGMKGSEVTAMLEKGERM------------------------------------------------GCPAGCPREMYD  251 (291)
T ss_dssp             SSTTCCHHHHHHHHHTTCCC------------------------------------------------CCCTTCCHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCC------------------------------------------------CCCCCCCHHHHH
Confidence            99887765544433221100                                                011245667899


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 047395          400 LLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~  420 (432)
                      +|.+||+.||++|||+.++++
T Consensus       252 li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          252 LMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999885

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=6e-45  Score=347.48  Aligned_cols=272  Identities=21%  Similarity=0.220  Sum_probs=183.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc-----ccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF-----DYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~-----~~~  168 (432)
                      .++|++.+.||+|+||.||+|++  +++.||||+++.....  ....|.+++..   ....|+||+++++.+     ...
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~e~~~~~~---~~~~h~~i~~~~~~~~~~~~~~~   84 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQ--NFINEKNIYRV---PLMEHDNIARFIVGDERVTADGR   84 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHH--HHHHHHHHHTS---TTCCCTTBCCEEEEEEEECTTSC
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccchh--hHHHHHHHHHH---HhccCcchhhheecccccccCCC
Confidence            46899999999999999999976  5899999999754332  23333333221   112459999998743     344


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CcEeccCCCCcEEeecCCcccc
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL---------RLIHTDLKPENILFVSPEYLKI  238 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---------~ivHrDlkp~NIli~~~~~~k~  238 (432)
                      ..+|+||||+ +++|.+++....   .++..+..++.||+.||.|||++         ||+||||||+|||++.++    
T Consensus        85 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~----  157 (336)
T 3g2f_A           85 MEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDG----  157 (336)
T ss_dssp             EEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTS----
T ss_pred             ceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCC----
Confidence            5789999999 999999998764   68999999999999999999999         999999999999976544    


Q ss_pred             CCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-----------CccccccCCCcchhHHHhC-------CCCCc
Q 047395          239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----------EHNYIVSTRHYRAPEVILG-------LGWSY  300 (432)
Q Consensus       239 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----------~~~~~~gt~~y~aPE~~~~-------~~~~~  300 (432)
                                             .+||+|||++.....           .....+||+.|+|||++.+       ..++.
T Consensus       158 -----------------------~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  214 (336)
T 3g2f_A          158 -----------------------TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALK  214 (336)
T ss_dssp             -----------------------CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHH
T ss_pred             -----------------------cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCccccccccccc
Confidence                                   566666666543221           1223479999999999987       34567


Q ss_pred             cchHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCH-HHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhc
Q 047395          301 PCDMWSVGCILIELCSGEALFQTHEN-LEHLAMMERVLGPIPQ-HMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK  378 (432)
Q Consensus       301 ~sDiwSlGvil~elltg~~pf~~~~~-~~~~~~i~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (432)
                      ++|||||||++|||++|..||..... .+....+....+..|. ........     .......+|....          
T Consensus       215 ~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~----------  279 (336)
T 3g2f_A          215 QVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVS-----REKQRPKFPEAWK----------  279 (336)
T ss_dssp             HHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHT-----TSCCCCCCCTTCC----------
T ss_pred             ccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhc-----ccccCCCCCcccc----------
Confidence            89999999999999999776643221 1111111111111110 00000000     0000011111000          


Q ss_pred             CchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHh------cCCCCCCC
Q 047395          379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL------KHPFFTRD  427 (432)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL------~hp~f~~~  427 (432)
                                ....+++.+.+||.+||+.||++|||+.|++      -++|-+++
T Consensus       280 ----------~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~  324 (336)
T 3g2f_A          280 ----------ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNK  324 (336)
T ss_dssp             ----------CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred             ----------cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence                      0123456799999999999999999999994      57887664

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=4.7e-44  Score=335.51  Aligned_cols=246  Identities=16%  Similarity=0.209  Sum_probs=190.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCC---cEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc-ccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETG---ETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW-FDY  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~---~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~-~~~  167 (432)
                      ..+|++.+.||+|+||+||+|.+..++   ..||+|.++..  ....+.+.+|+.+++.++|     +||++++++ +..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~   98 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-----PNVLSLLGICLRS   98 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCC-----TTBCCCCEEECCS
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCC-----CCEeeeeeEEEcC
Confidence            357999999999999999999976443   46899998642  3344678889999988876     999999998 456


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      ++..++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.           
T Consensus        99 ~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~-----------  166 (298)
T 3f66_A           99 EGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT-----------  166 (298)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC-----------
T ss_pred             CCceEEEEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCC-----------
Confidence            67889999999 889999997644 46899999999999999999999999999999999999765544           


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccC-------CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-------EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GE  318 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~  318 (432)
                                      +||+|||++.....       ......+|+.|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       167 ----------------~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~  230 (298)
T 3f66_A          167 ----------------VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA  230 (298)
T ss_dssp             ----------------EEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ----------------EEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCC
Confidence                            55555555443221       1223457889999999999999999999999999999999 67


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      +||...+..+....+.......                                                ....+++.+.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~l~  262 (298)
T 3f66_A          231 PPYPDVNTFDITVYLLQGRRLL------------------------------------------------QPEYCPDPLY  262 (298)
T ss_dssp             CSSTTSCTTTHHHHHHTTCCCC------------------------------------------------CCTTCCHHHH
T ss_pred             CCCccCCHHHHHHHHhcCCCCC------------------------------------------------CCccCCHHHH
Confidence            7777665544433332211100                                                0123456689


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~  420 (432)
                      ++|.+||+.||++|||+.|+++
T Consensus       263 ~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          263 EVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999985

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.4e-44  Score=333.31  Aligned_cols=244  Identities=20%  Similarity=0.273  Sum_probs=191.8

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCc---EEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .|++.+.||+|+||+||+|.+..+++   .||+|+++..  ....+.+.+|+.+++.++|     +||+++++++...+.
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~   96 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH-----PNVLALIGIMLPPEG   96 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCC-----TTBCCCCEEECCSSS
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCC-----CCeeeEEEEEecCCC
Confidence            57888999999999999999765554   7999998643  2345678889999988876     999999999876655


Q ss_pred             E-EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          171 I-CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       171 ~-~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      . ++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+               
T Consensus        97 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~---------------  160 (298)
T 3pls_A           97 LPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDES---------------  160 (298)
T ss_dssp             CCEEEECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT---------------
T ss_pred             CcEEEEecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC---------------
Confidence            4 9999999 999999998743 468999999999999999999999999999999999997544               


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccC-------CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQ-------EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                  +.+||+|||++.....       ......+|+.|+|||++.+..++.++|||||||++|+|++ |.+|
T Consensus       161 ------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~  228 (298)
T 3pls_A          161 ------------FTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP  228 (298)
T ss_dssp             ------------CCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred             ------------CcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCC
Confidence                        4566666666643221       2233467889999999999999999999999999999999 4555


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |...+..+....+......                                                .....+++.+.+|
T Consensus       229 ~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~~l  260 (298)
T 3pls_A          229 YRHIDPFDLTHFLAQGRRL------------------------------------------------PQPEYCPDSLYQV  260 (298)
T ss_dssp             TTTSCGGGHHHHHHTTCCC------------------------------------------------CCCTTCCHHHHHH
T ss_pred             CccCCHHHHHHHhhcCCCC------------------------------------------------CCCccchHHHHHH
Confidence            5554444433332221110                                                0112456678999


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      |.+||+.||.+|||+.++++
T Consensus       261 i~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          261 MQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHH
Confidence            99999999999999999885

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.2e-45  Score=375.29  Aligned_cols=280  Identities=24%  Similarity=0.321  Sum_probs=206.1

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc---
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY---  167 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~---  167 (432)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||+++..  ....+.+.+|+.++..+.|     |||+++++++..   
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~H-----pnIV~l~~v~~~~~~   86 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNH-----PNVVSAREVPDGLQK   86 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCB-----TTBCCEEECCTTTCC
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCC-----CCCCceeeeeccccc
Confidence            347899999999999999999999999999999998642  3445678899999999977     999999998765   


Q ss_pred             ---CCeEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          168 ---RNHICIVFEML-GPSLYDFLRKNNY-RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       168 ---~~~~~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                         .+..|+||||+ |++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||++.++        
T Consensus        87 ~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g--------  158 (676)
T 3qa8_A           87 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP--------  158 (676)
T ss_dssp             CCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCS--------
T ss_pred             ccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCC--------
Confidence               67889999999 9999999987432 3589999999999999999999999999999999999987533        


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                      ....++|+|||.+......  .....||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       159 ----------------~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~P  222 (676)
T 3qa8_A          159 ----------------QRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP  222 (676)
T ss_dssp             ----------------SSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSS
T ss_pred             ----------------CceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCC
Confidence                            2345788888888764433  2345799999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+......+      ............   ...-...+...+.....                ........+++.+.+|
T Consensus       223 f~~~~~~~~~------~~~i~~~~~~~~---~~~~~l~g~~~~~~~lp----------------~p~~l~~~ls~~L~dL  277 (676)
T 3qa8_A          223 FLPNWQPVQW------HGKVREKSNEHI---VVYDDLTGAVKFSSVLP----------------TPNHLSGILAGKLERW  277 (676)
T ss_dssp             CCSSCHHHHS------STTCC------C---CSCCCCSSSCCCCSSSC----------------CSCCCCGGGHHHHHHH
T ss_pred             CCcccchhhh------hhhhhcccchhh---hhhhhhccccccccccC----------------CchhhchhhhHHHHHH
Confidence            9765432111      000000000000   00000011111111100                0011223467889999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      |.+||.+||++|||+.|+++||||+.
T Consensus       278 I~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          278 LQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             HHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             HHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            99999999999999999999999864

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=2e-44  Score=364.29  Aligned_cols=254  Identities=26%  Similarity=0.332  Sum_probs=206.9

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      +...++|++.++||+|+||.||+|.+.. +..||||+++......+.+.+|+.+++.++|     +||+++++++.. +.
T Consensus       263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-----pniv~~~~~~~~-~~  335 (535)
T 2h8h_A          263 EIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQLYAVVSE-EP  335 (535)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCC-----TTBCCEEEEECS-SS
T ss_pred             ecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCC-----CCEeeEEEEEee-cc
Confidence            3446789999999999999999999865 4679999998655556788999999999977     999999999876 67


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +||||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.                 
T Consensus       336 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~-----------------  398 (535)
T 2h8h_A          336 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE-----------------  398 (535)
T ss_dssp             CEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG-----------------
T ss_pred             ceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcC-----------------
Confidence            89999999 889999998643346999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH  324 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~  324 (432)
                                ++.+||+|||++......    .....+|..|+|||++.+..++.++|||||||+||||++ |..||.+.
T Consensus       399 ----------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~  468 (535)
T 2h8h_A          399 ----------NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM  468 (535)
T ss_dssp             ----------GGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred             ----------CCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                      456777777777654321    122346788999999999899999999999999999999 99999887


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      ...+....+......                                                .....++..+.+||.+|
T Consensus       469 ~~~~~~~~i~~~~~~------------------------------------------------~~~~~~~~~l~~li~~c  500 (535)
T 2h8h_A          469 VNREVLDQVERGYRM------------------------------------------------PCPPECPESLHDLMCQC  500 (535)
T ss_dssp             CHHHHHHHHHTTCCC------------------------------------------------CCCTTCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCC------------------------------------------------CCCCCCCHHHHHHHHHH
Confidence            766655544322110                                                01124566789999999


Q ss_pred             cccCCCCCCCHHHHhcC--CCCCC
Q 047395          405 LRYDPSSRLTAHDALKH--PFFTR  426 (432)
Q Consensus       405 L~~dP~~R~ta~elL~h--p~f~~  426 (432)
                      |+.||++|||+++|++.  .+|..
T Consensus       501 l~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          501 WRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             TCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             cCCChhHCcCHHHHHHHHHHHhhc
Confidence            99999999999999873  66654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=8e-45  Score=345.43  Aligned_cols=262  Identities=22%  Similarity=0.272  Sum_probs=196.4

Q ss_pred             cCceEEEeeeecccceEEEEEE----ecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc--
Q 047395           94 TSRYKILRKIGEGTFGQVLDCL----DRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD--  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~----~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~--  166 (432)
                      .++|++.+.||+|+||.||+|+    +..+++.||||++... ....+.+.+|+.+++.+.|     +||+++++++.  
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~   96 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS-----DFIVKYRGVSYGP   96 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEEECS
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCC-----CceeEEEEEEecC
Confidence            3689999999999999999998    5678999999999743 3345668899999998866     99999999875  


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      ..+.+|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.          
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~----------  165 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAH----------  165 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE----------
T ss_pred             CCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCC----------
Confidence            557799999999 999999998753 35999999999999999999999999999999999999876554          


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                       +||+|||++......      .....||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       166 -----------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~  228 (327)
T 3lxl_A          166 -----------------VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD  228 (327)
T ss_dssp             -----------------EEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             -----------------EEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCC
Confidence                             555555554432211      122457888999999999889999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||...........  ......+.                           .........    ..........+++.+.+
T Consensus       229 p~~~~~~~~~~~~--~~~~~~~~---------------------------~~~~~~~~~----~~~~~~~~~~~~~~l~~  275 (327)
T 3lxl_A          229 KSCSPSAEFLRMM--GCERDVPA---------------------------LSRLLELLE----EGQRLPAPPACPAEVHE  275 (327)
T ss_dssp             GGGSHHHHHHHHC--C----CCH---------------------------HHHHHHHHH----TTCCCCCCTTCCHHHHH
T ss_pred             CCccccchhhhhc--cccccccc---------------------------HHHHHHHhh----cccCCCCCCcccHHHHH
Confidence            9975332111000  00000000                           000000000    00011123456788999


Q ss_pred             HHHHccccCCCCCCCHHHHhcC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~h  421 (432)
                      ||.+||+.||++|||+.|++++
T Consensus       276 li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          276 LMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999653

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=7.6e-44  Score=336.50  Aligned_cols=248  Identities=15%  Similarity=0.221  Sum_probs=190.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecC---CCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE---TGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~---~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .++|++.+.||+|+||.||+|.+..   +++.||+|+++..   ....+.+.+|+.++..++|     +||+++++++..
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~  107 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSH-----PNVIRLLGVCIE  107 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCC-----TTBCCCCEEEEC
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCC-----CCeeeeeEEEee
Confidence            5789999999999999999998765   4568999998643   3334567889999888876     999999999876


Q ss_pred             CC-----eEEEEEccC-CCCHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccc
Q 047395          168 RN-----HICIVFEML-GPSLYDFLRKN----NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLK  237 (432)
Q Consensus       168 ~~-----~~~lv~e~~-~~~L~~~l~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  237 (432)
                      ..     ..++||||+ +++|.+++...    ....+++..++.++.||+.||.|||++||+||||||+|||++.+    
T Consensus       108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~----  183 (313)
T 3brb_A          108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD----  183 (313)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTT----
T ss_pred             ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC----
Confidence            54     469999999 89999999642    22469999999999999999999999999999999999997554    


Q ss_pred             cCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHH
Q 047395          238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI  312 (432)
Q Consensus       238 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~  312 (432)
                                             +.+||+|||++......     .....+++.|+|||++.+..++.++|||||||++|
T Consensus       184 -----------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  240 (313)
T 3brb_A          184 -----------------------MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW  240 (313)
T ss_dssp             -----------------------SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHH
T ss_pred             -----------------------CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHH
Confidence                                   45666666665543221     12235688899999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcc
Q 047395          313 ELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD  391 (432)
Q Consensus       313 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (432)
                      +|++ |..||.+....+....+......                                                ....
T Consensus       241 el~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~  272 (313)
T 3brb_A          241 EIATRGMTPYPGVQNHEMYDYLLHGHRL------------------------------------------------KQPE  272 (313)
T ss_dssp             HHHTTSCCSSTTCCGGGHHHHHHTTCCC------------------------------------------------CCBT
T ss_pred             HHHhcCCCCCccCCHHHHHHHHHcCCCC------------------------------------------------CCCc
Confidence            9999 99999877665544333221100                                                0113


Q ss_pred             cchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      .+++.+.+||.+||+.||.+|||+.+++++
T Consensus       273 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          273 DCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             cccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            456678999999999999999999999864

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=1.7e-45  Score=360.92  Aligned_cols=251  Identities=17%  Similarity=0.206  Sum_probs=188.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCC-----------CCcee
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRS-----------GSRCV  159 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~-----------~~~iv  159 (432)
                      ..|.+.+.||+|+||+||+|++..+|+.||||+++..    ....+.+.+|+.++..+.|....           ...++
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            4588999999999999999999999999999998732    22345677888888877652100           00111


Q ss_pred             Ee------eccccc-----CCeEEEEEccCCCCHHHHHHh-----cCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccC
Q 047395          160 QI------RNWFDY-----RNHICIVFEMLGPSLYDFLRK-----NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDL  223 (432)
Q Consensus       160 ~~------~~~~~~-----~~~~~lv~e~~~~~L~~~l~~-----~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  223 (432)
                      .+      ..++..     ...++++|++++++|.+++..     .....+++..+..++.||+.||+|||++||+||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi  237 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  237 (413)
T ss_dssp             ECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence            11      111111     235789999999999999952     22235788899999999999999999999999999


Q ss_pred             CCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHH----------
Q 047395          224 KPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVI----------  293 (432)
Q Consensus       224 kp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~----------  293 (432)
                      ||+|||++.                           ++.+||+|||+++.........+| +.|+|||++          
T Consensus       238 Kp~NILl~~---------------------------~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~  289 (413)
T 3dzo_A          238 RPVDIVLDQ---------------------------RGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQH  289 (413)
T ss_dssp             CGGGEEECT---------------------------TCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGG
T ss_pred             ccceEEEec---------------------------CCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccc
Confidence            999999654                           455777888877665555556678 999999999          


Q ss_pred             hCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHH
Q 047395          294 LGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESI  373 (432)
Q Consensus       294 ~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (432)
                      .+..++.++|||||||++|||++|+.||...+......                      .                   
T Consensus       290 ~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~----------------------~-------------------  328 (413)
T 3dzo_A          290 HPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSE----------------------W-------------------  328 (413)
T ss_dssp             CCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSG----------------------G-------------------
T ss_pred             cCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHH----------------------H-------------------
Confidence            44558889999999999999999999997644211000                      0                   


Q ss_pred             HHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          374 KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                                  .......+++.+.+||.+||+.||++|||+.|+++||||++
T Consensus       329 ------------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          329 ------------IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             ------------GGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             ------------HHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence                        00111245677999999999999999999999999999964

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=4e-45  Score=347.32  Aligned_cols=266  Identities=20%  Similarity=0.250  Sum_probs=198.9

Q ss_pred             ecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh--hhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           88 ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        88 ~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      ...+...++|++.+.||+|+||.||+|.+ .+++.||||+++....  ....+.+|+.++..+.|     +||+++++++
T Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~   96 (326)
T 3uim_A           23 RELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVH-----RNLLRLRGFC   96 (326)
T ss_dssp             HHHHTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCCC-----TTBCCCCEEE
T ss_pred             HHHHHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhccC-----CCccceEEEE
Confidence            33445578999999999999999999975 4689999999875332  23357889888887766     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcEeccCCCCcEEeecCCccccC
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNY--RPFPVDLVREIGRQLLECVAFMHDL---RLIHTDLKPENILFVSPEYLKIP  239 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIli~~~~~~k~~  239 (432)
                      ...+..++||||+ +++|.+++.....  ..+++..+..++.||+.||.|||++   ||+||||||+|||++.       
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~-------  169 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE-------  169 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT-------
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC-------
Confidence            9999999999999 8899999986532  3499999999999999999999999   9999999999999654       


Q ss_pred             CcccccCCCCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHH
Q 047395          240 DYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC  315 (432)
Q Consensus       240 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ell  315 (432)
                                          ++.+||+|||++......    .....||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       170 --------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  229 (326)
T 3uim_A          170 --------------------EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI  229 (326)
T ss_dssp             --------------------TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHH
T ss_pred             --------------------CCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHH
Confidence                                456777777776643322    22346899999999999888999999999999999999


Q ss_pred             hCCCCCCCCC-----cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhc
Q 047395          316 SGEALFQTHE-----NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV  390 (432)
Q Consensus       316 tg~~pf~~~~-----~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (432)
                      +|..||....     .......+....                   .........                .........
T Consensus       230 ~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~----------------~~~~~~~~~  274 (326)
T 3uim_A          230 TGQRAFDLARLANDDDVMLLDWVKGLL-------------------KEKKLEALV----------------DVDLQGNYK  274 (326)
T ss_dssp             HCCCSBCHHHHTTTSCSBHHHHHTTTT-------------------SSCCSTTSS----------------CTTCTTSCC
T ss_pred             hCCCcccccccccccchhHHHHHHHHh-------------------hchhhhhhc----------------ChhhccccC
Confidence            9999995210     000000000000                   000000000                000001112


Q ss_pred             ccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       391 ~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      ...+..+.+||.+||+.||.+|||+.|+++|
T Consensus       275 ~~~~~~l~~li~~cl~~dP~~Rps~~ell~~  305 (326)
T 3uim_A          275 DEEVEQLIQVALLCTQSSPMERPKMSEVVRM  305 (326)
T ss_dssp             HHHHHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcCCccCCCHHHHHHH
Confidence            3445678999999999999999999999986

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.6e-44  Score=347.48  Aligned_cols=246  Identities=16%  Similarity=0.204  Sum_probs=187.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCC---cEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc-ccC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETG---ETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF-DYR  168 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~---~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~-~~~  168 (432)
                      ..|++.+.||+|+||+||+|.+..++   ..||+|.++..  ......+.+|+.+++.++|     +||+++++++ ..+
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~h-----pnIv~~~~~~~~~~  163 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-----PNVLSLLGICLRSE  163 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCC-----TTBCCCCEEECCCS
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC-----CCcceEEEEEEcCC
Confidence            35899999999999999999876433   46899998642  2345678889988888876     9999999985 455


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +..|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++             
T Consensus       164 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-------------  229 (373)
T 3c1x_A          164 GSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-------------  229 (373)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-------------
T ss_pred             CCeEEEEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCC-------------
Confidence            6889999999 889999998654 4689999999999999999999999999999999999976544             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC-------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEA  319 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~  319 (432)
                                    .+||+|||++......       .....+|+.|+|||++.+..++.++|||||||++|||++ |.+
T Consensus       230 --------------~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~  295 (373)
T 3c1x_A          230 --------------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP  295 (373)
T ss_dssp             --------------CEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             --------------CEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCC
Confidence                          5566666655432211       122456788999999999999999999999999999999 788


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||...+..+....+......                                                ..+..+++.+.+
T Consensus       296 p~~~~~~~~~~~~~~~~~~~------------------------------------------------~~p~~~~~~l~~  327 (373)
T 3c1x_A          296 PYPDVNTFDITVYLLQGRRL------------------------------------------------LQPEYCPDPLYE  327 (373)
T ss_dssp             SCTTSCSSCHHHHHHTTCCC------------------------------------------------CCCTTCCHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCC------------------------------------------------CCCCCCCHHHHH
Confidence            88766554433322211100                                                011245667899


Q ss_pred             HHHHccccCCCCCCCHHHHhcC
Q 047395          400 LLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~h  421 (432)
                      +|.+||+.||++|||+.|++++
T Consensus       328 li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          328 VMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999863

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=6e-44  Score=344.60  Aligned_cols=210  Identities=19%  Similarity=0.260  Sum_probs=170.1

Q ss_pred             cCceEEEeeeecccceEEEEEE-----ecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCL-----DRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~-----~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|++.+.||+|+||+||+|+     +..+++.||||+++..  ....+..|+.++..+.+  ..|+||+.+++++...
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~--~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKP--SMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCG--GGGGGBCCEEEEEECS
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhh--hhhhhhhhhheeeecC
Confidence            5789999999999999999994     6778999999998753  34457788888888763  2348999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          169 NHICIVFEML-GPSLYDFLRKN---NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                      +..|+||||+ +++|.+++...   ....+++..++.++.||+.||+|||++||+||||||+|||++.+....       
T Consensus       140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~-------  212 (365)
T 3e7e_A          140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQ-------  212 (365)
T ss_dssp             SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-------
T ss_pred             CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCc-------
Confidence            9999999999 89999999852   224699999999999999999999999999999999999986510000       


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCccccc-----CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH-----QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                               .......+.+||+|||++....     ......+||+.|+|||++.+..++.++|||||||++|||+||+.
T Consensus       213 ---------~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~  283 (365)
T 3e7e_A          213 ---------DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTY  283 (365)
T ss_dssp             ---------------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSC
T ss_pred             ---------cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence                     0001235788999999886432     12234579999999999999999999999999999999999999


Q ss_pred             CCCC
Q 047395          320 LFQT  323 (432)
Q Consensus       320 pf~~  323 (432)
                      ||..
T Consensus       284 pf~~  287 (365)
T 3e7e_A          284 MKVK  287 (365)
T ss_dssp             CCEE
T ss_pred             cccc
Confidence            9964

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=4.5e-44  Score=338.90  Aligned_cols=260  Identities=24%  Similarity=0.348  Sum_probs=193.7

Q ss_pred             ecCce-EEEeeeecccceEEEEEE----ecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           93 LTSRY-KILRKIGEGTFGQVLDCL----DRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        93 ~~~~y-~i~~~lg~G~~g~V~~a~----~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      +.++| +++++||+|+||+||+|.    +..+++.||||+++..  ......+.+|+.+++.++|     +||+++++++
T Consensus        28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~  102 (318)
T 3lxp_A           28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYH-----EHIIKYKGCC  102 (318)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCC-----TTBCCEEEEE
T ss_pred             ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCC-----cchhhEEEEE
Confidence            45566 999999999999998775    3457899999999753  2445678899999999876     9999999998


Q ss_pred             cc--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          166 DY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       166 ~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ..  ...+++||||+ +++|.+++....   +++..++.++.||+.||.|||++||+||||||+|||++.+         
T Consensus       103 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~---------  170 (318)
T 3lxp_A          103 EDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDND---------  170 (318)
T ss_dssp             EETTTTEEEEEECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT---------
T ss_pred             ecCCCceEEEEEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCC---------
Confidence            76  46899999999 889999998754   9999999999999999999999999999999999997554         


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt  316 (432)
                                        +.+||+|||++......      .....+|..|+|||++.+..++.++|||||||++|+|++
T Consensus       171 ------------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~  232 (318)
T 3lxp_A          171 ------------------RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT  232 (318)
T ss_dssp             ------------------CCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             ------------------CCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHh
Confidence                              45666666665543322      123457888999999999889999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       317 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      |..||.......     ....+.........   .....+..                         .........++..
T Consensus       233 g~~p~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~-------------------------~~~~~~~~~~~~~  279 (318)
T 3lxp_A          233 HCDSSQSPPTKF-----LELIGIAQGQMTVL---RLTELLER-------------------------GERLPRPDKCPAE  279 (318)
T ss_dssp             TTCGGGSHHHHH-----HHHHCSCCHHHHHH---HHHHHHHT-------------------------TCCCCCCTTCCHH
T ss_pred             CCCcccccchhh-----hhhhcccccchhHH---HHHHHHhc-------------------------ccCCCCCccccHH
Confidence            999996532211     00000000000000   00000000                         0001122456778


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhc
Q 047395          397 LIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      +.+||.+||+.||++|||+.|+++
T Consensus       280 l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          280 VYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHH
Confidence            999999999999999999999984

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=7e-44  Score=337.31  Aligned_cols=248  Identities=21%  Similarity=0.295  Sum_probs=191.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeec-hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc----cC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS-IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD----YR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~----~~  168 (432)
                      .++|++.+.||+|+||.||+|++..+++.||||++.. .....+.+.+|+.+++.+.|     +||+++++++.    ..
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~~~~~  102 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNH-----PNILRLVAYCLRERGAK  102 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCC-----TTBCCCCEEEEEEETTE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCC-----CCeeeEEEEEEeccCCC
Confidence            4689999999999999999999999999999998864 33455678889999988866     99999999886    34


Q ss_pred             CeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          169 NHICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      ...|+||||+ +++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.             
T Consensus       103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~-------------  169 (317)
T 2buj_A          103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD-------------  169 (317)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-------------
T ss_pred             ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-------------
Confidence            5889999999 88999999863  2246999999999999999999999999999999999999654             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCC------------ccccccCCCcchhHHHhCCC---CCccchHHHHHHH
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------------HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCI  310 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------------~~~~~gt~~y~aPE~~~~~~---~~~~sDiwSlGvi  310 (432)
                                    ++.++|+|||.+......            .....||+.|+|||++.+..   ++.++|||||||+
T Consensus       170 --------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i  235 (317)
T 2buj_A          170 --------------EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCV  235 (317)
T ss_dssp             --------------TSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHH
T ss_pred             --------------CCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHH
Confidence                          445677777765543211            11235799999999997654   6889999999999


Q ss_pred             HHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhh
Q 047395          311 LIELCSGEALFQTHENL--EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ  388 (432)
Q Consensus       311 l~elltg~~pf~~~~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (432)
                      +|+|++|..||......  .....+.                       . ....                        .
T Consensus       236 l~el~~g~~p~~~~~~~~~~~~~~~~-----------------------~-~~~~------------------------~  267 (317)
T 2buj_A          236 LYAMMFGEGPYDMVFQKGDSVALAVQ-----------------------N-QLSI------------------------P  267 (317)
T ss_dssp             HHHHHHSSCTTHHHHHTTSCHHHHHH-----------------------C-C--C------------------------C
T ss_pred             HHHHHhCCCChhhhhcccchhhHHhh-----------------------c-cCCC------------------------C
Confidence            99999999999531000  0000000                       0 0000                        0


Q ss_pred             hcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       389 ~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      ....++..+.+||.+||+.||.+|||+.+++++
T Consensus       268 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          268 QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            113456678999999999999999999999975

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.3e-43  Score=338.97  Aligned_cols=260  Identities=19%  Similarity=0.256  Sum_probs=196.1

Q ss_pred             CceeecCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           84 HYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        84 ~~~~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      ..++..++.+.++|++.+.||+|+||.||+|.+  +++.||||+++...  ...+.+|.+++..+.   ..|+||+++++
T Consensus        31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~---l~h~ni~~~~~  103 (342)
T 1b6c_B           31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWFREAEIYQTVM---LRHENILGFIA  103 (342)
T ss_dssp             SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHSC---CCCTTBCCEEE
T ss_pred             CCceeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchh--HHHHHHHHHHHHHhh---cCCCcEEEEEe
Confidence            455666777889999999999999999999987  48999999986532  345677888777631   23499999999


Q ss_pred             ccccCC----eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCcEeccCCCCcEEe
Q 047395          164 WFDYRN----HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH--------DLRLIHTDLKPENILF  230 (432)
Q Consensus       164 ~~~~~~----~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~ivHrDlkp~NIli  230 (432)
                      ++....    ..|+||||+ +++|.+++...   .+++..++.++.||+.||.|||        ++||+||||||+|||+
T Consensus       104 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll  180 (342)
T 1b6c_B          104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV  180 (342)
T ss_dssp             EEECCCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE
T ss_pred             eecccCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE
Confidence            988765    899999999 88999999875   4999999999999999999999        8999999999999996


Q ss_pred             ecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-------ccccccCCCcchhHHHhCCC------
Q 047395          231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-------HNYIVSTRHYRAPEVILGLG------  297 (432)
Q Consensus       231 ~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~------  297 (432)
                      +.                           ++.+||+|||++......       .....||+.|+|||++.+..      
T Consensus       181 ~~---------------------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  233 (342)
T 1b6c_B          181 KK---------------------------NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE  233 (342)
T ss_dssp             CT---------------------------TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHH
T ss_pred             CC---------------------------CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccc
Confidence            54                           445777777776543322       23357899999999998763      


Q ss_pred             CCccchHHHHHHHHHHHHhC----------CCCCCCCCc----HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCC
Q 047395          298 WSYPCDMWSVGCILIELCSG----------EALFQTHEN----LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW  363 (432)
Q Consensus       298 ~~~~sDiwSlGvil~elltg----------~~pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  363 (432)
                      ++.++|||||||++|+|++|          ..||.....    .+........ ...                   ....
T Consensus       234 ~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~-------------------~~~~  293 (342)
T 1b6c_B          234 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE-QKL-------------------RPNI  293 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT-SCC-------------------CCCC
T ss_pred             cCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHH-HHh-------------------CCCC
Confidence            33689999999999999999          778865321    1111110000 000                   0000


Q ss_pred             CCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          364 PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      +.                     .......+..+.+||.+||+.||++|||+.|+++|
T Consensus       294 ~~---------------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          294 PN---------------------RWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CG---------------------GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             cc---------------------cccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            00                     00012345668999999999999999999999875

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=7.4e-44  Score=332.85  Aligned_cols=246  Identities=21%  Similarity=0.308  Sum_probs=188.5

Q ss_pred             cCceEEEeeeecccceEEEEEEecC-CCc--EEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE-TGE--TVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~-~~~--~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .++|++.+.||+|+||+||+|++.. +++  .||||+++..    ....+.+.+|+.++..++|     +||+++++++.
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~i~~~~~~~~   91 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH-----RNLIRLYGVVL   91 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCC-----TTBCCEEEEEC
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCC-----CCcccEEEEEc
Confidence            4689999999999999999998643 333  6999998643    2345677889999998876     99999999988


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      ... .++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++           
T Consensus        92 ~~~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~-----------  158 (291)
T 1u46_A           92 TPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD-----------  158 (291)
T ss_dssp             SSS-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT-----------
T ss_pred             cCC-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCC-----------
Confidence            765 88999999 899999998753 3599999999999999999999999999999999999987654           


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GE  318 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~  318 (432)
                                      .+||+|||++......      .....+|..|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       159 ----------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~  222 (291)
T 1u46_A          159 ----------------LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ  222 (291)
T ss_dssp             ----------------EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred             ----------------CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                            4556666655443221      122356788999999998889999999999999999999 99


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||.+.+..+....+.......+                                               ....++..+.
T Consensus       223 ~p~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~l~  255 (291)
T 1u46_A          223 EPWIGLNGSQILHKIDKEGERLP-----------------------------------------------RPEDCPQDIY  255 (291)
T ss_dssp             CTTTTCCHHHHHHHHHTSCCCCC-----------------------------------------------CCTTCCHHHH
T ss_pred             CCcccCCHHHHHHHHHccCCCCC-----------------------------------------------CCcCcCHHHH
Confidence            99988776555444322111110                                               1124566789


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~  420 (432)
                      ++|.+||..||++|||+.++++
T Consensus       256 ~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          256 NVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHccCCcccCcCHHHHHH
Confidence            9999999999999999999986

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.6e-43  Score=333.27  Aligned_cols=256  Identities=22%  Similarity=0.329  Sum_probs=193.8

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeech-----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      |...+.||+|+||.||+|.+  +++.||||++...     ....+.+.+|+.++..++|     +||+++++++...+..
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-----~~i~~~~~~~~~~~~~  105 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH-----ENLVELLGFSSDGDDL  105 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC-----TTBCCEEEEECSSSSC
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC-----CCeEEEEEEEecCCce
Confidence            44558999999999999986  5889999998642     2345678899999999876     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNN-YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      ++||||+ +++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.                 
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~-----------------  168 (307)
T 2nru_A          106 CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDE-----------------  168 (307)
T ss_dssp             EEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT-----------------
T ss_pred             EEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcC-----------------
Confidence            9999999 999999997532 246999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                ++.++|+|||++......     .....||+.|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus       169 ----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~  237 (307)
T 2nru_A          169 ----------AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH  237 (307)
T ss_dssp             ----------TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTT
T ss_pred             ----------CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccC
Confidence                      445667777766543321     123468999999999876 4789999999999999999999999875


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      ........+..........+        ..++....                          .......+..+.++|.+|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~--------------------------~~~~~~~~~~l~~li~~c  283 (307)
T 2nru_A          238 REPQLLLDIKEEIEDEEKTI--------EDYIDKKM--------------------------NDADSTSVEAMYSVASQC  283 (307)
T ss_dssp             BSSSBTTHHHHHHHTTSCCH--------HHHSCSSC--------------------------SCCCHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHhhhhhhhh--------hhhccccc--------------------------cccchHHHHHHHHHHHHH
Confidence            54332222221111100000        00000000                          001123456689999999


Q ss_pred             cccCCCCCCCHHHHhcC
Q 047395          405 LRYDPSSRLTAHDALKH  421 (432)
Q Consensus       405 L~~dP~~R~ta~elL~h  421 (432)
                      |+.||.+|||+.+++++
T Consensus       284 l~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          284 LHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             TCSSTTTSCCHHHHHHH
T ss_pred             cCCCcccCcCHHHHHHH
Confidence            99999999999999864

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.1e-43  Score=360.67  Aligned_cols=245  Identities=24%  Similarity=0.316  Sum_probs=194.5

Q ss_pred             cCceEEEe-eeecccceEEEEEEec--CCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILR-KIGEGTFGQVLDCLDR--ETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~-~lg~G~~g~V~~a~~~--~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .+++.+.+ +||+|+||.||+|.+.  .++..||||+++..  ....+.+.+|++++..++|     +||+++++++.. 
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~h-----pniv~l~~~~~~-  407 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN-----PYIVRLIGVCQA-  407 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCC-----TTBCCEEEEEES-
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCC-----CCEeeEEEEecc-
Confidence            45667776 8999999999999876  34567999999753  2345678899999998876     999999999876 


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.            
T Consensus       408 ~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~------------  474 (613)
T 2ozo_A          408 EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHY------------  474 (613)
T ss_dssp             SSEEEEEECCTTCBHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE------------
T ss_pred             CCeEEEEEeCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCc------------
Confidence            5699999999 999999997653 46999999999999999999999999999999999999876554            


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCc------cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                     +||+|||+++......      ....+|+.|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       475 ---------------vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~P  539 (613)
T 2ozo_A          475 ---------------AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP  539 (613)
T ss_dssp             ---------------EEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ---------------EEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence                           5555555554332111      11235688999999999999999999999999999998 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+..+....+......                                                ..+..+++.+.+|
T Consensus       540 f~~~~~~~~~~~i~~~~~~------------------------------------------------~~p~~~~~~l~~l  571 (613)
T 2ozo_A          540 YKKMKGPEVMAFIEQGKRM------------------------------------------------ECPPECPPELYAL  571 (613)
T ss_dssp             TTTCCSHHHHHHHHTTCCC------------------------------------------------CCCTTCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCC------------------------------------------------CCCCcCCHHHHHH
Confidence            9988777665544332110                                                0113466779999


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      |.+||+.||++|||+.++++
T Consensus       572 i~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          572 MSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHHTTCSSTTTSCCHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999863

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=3.8e-43  Score=360.96  Aligned_cols=242  Identities=22%  Similarity=0.321  Sum_probs=192.6

Q ss_pred             ceEEE-eeeecccceEEEEEEe--cCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           96 RYKIL-RKIGEGTFGQVLDCLD--RETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        96 ~y~i~-~~lg~G~~g~V~~a~~--~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .+.+. ++||+|+||+||+|.+  ..+++.||||+++...   ...+.+.+|+.++..++|     +||++++++++. +
T Consensus       369 ~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~h-----pnIv~l~~~~~~-~  442 (635)
T 4fl3_A          369 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN-----PYIVRMIGICEA-E  442 (635)
T ss_dssp             GEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCC-----TTBCCEEEEEES-S
T ss_pred             hccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEec-C
Confidence            34443 4899999999999954  4567899999997533   234678899999999976     999999999875 4


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      ..++||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.             
T Consensus       443 ~~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~-------------  507 (635)
T 4fl3_A          443 SWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY-------------  507 (635)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE-------------
T ss_pred             CEEEEEEccCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCC-------------
Confidence            588999999 899999998754  6999999999999999999999999999999999999876554             


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALF  321 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf  321 (432)
                                    +||+|||+++.....      .....+|+.|+|||++.+..++.++|||||||++|||++ |..||
T Consensus       508 --------------~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf  573 (635)
T 4fl3_A          508 --------------AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY  573 (635)
T ss_dssp             --------------EEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             --------------EEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence                          555555555433211      122346788999999999999999999999999999998 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+..+....+......                                                ..+..+++.+.+||
T Consensus       574 ~~~~~~~~~~~i~~~~~~------------------------------------------------~~p~~~~~~l~~li  605 (635)
T 4fl3_A          574 RGMKGSEVTAMLEKGERM------------------------------------------------GCPAGCPREMYDLM  605 (635)
T ss_dssp             TTCCHHHHHHHHHTTCCC------------------------------------------------CCCTTCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCCC------------------------------------------------CCCCCCCHHHHHHH
Confidence            988776665554332110                                                01124567789999


Q ss_pred             HHccccCCCCCCCHHHHhc
Q 047395          402 QGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~  420 (432)
                      .+||+.||++|||+.++++
T Consensus       606 ~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          606 NLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHHTCSSTTTSCCHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHH
Confidence            9999999999999999875

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.1e-43  Score=334.36  Aligned_cols=261  Identities=24%  Similarity=0.321  Sum_probs=194.4

Q ss_pred             cCceEEEeeeecccceEEEEEE----ecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCL----DRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~----~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|++++.||+|+||.||+|+    +..+++.||||++... ......+.+|+.++..++|     +||+++++++...
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-----~~iv~~~~~~~~~  114 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH-----DNIVKYKGVCYSA  114 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCC-----TTBCCEEEEECC-
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCC-----CCeeeEEEEEEec
Confidence            4679999999999999999998    4678999999998753 3345678899999998876     9999999987654


Q ss_pred             --CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          169 --NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       169 --~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                        ..+++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++           
T Consensus       115 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~-----------  182 (326)
T 2w1i_A          115 GRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-----------  182 (326)
T ss_dssp             ---CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT-----------
T ss_pred             CCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCC-----------
Confidence              4789999999 889999998764 4699999999999999999999999999999999999987654           


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCCc------cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH------NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                      .+||+|||++.......      ....+|..|+|||++.+..++.++|||||||++|+|++|..
T Consensus       183 ----------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~  246 (326)
T 2w1i_A          183 ----------------RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE  246 (326)
T ss_dssp             ----------------EEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred             ----------------cEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCC
Confidence                            45566666554432221      22356778999999999889999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCH-HHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQ-HMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      ||......     ..+..+..+. ....                        ..+......    .........++..+.
T Consensus       247 ~~~~~~~~-----~~~~~~~~~~~~~~~------------------------~~~~~~~~~----~~~~~~~~~~~~~l~  293 (326)
T 2w1i_A          247 KSKSPPAE-----FMRMIGNDKQGQMIV------------------------FHLIELLKN----NGRLPRPDGCPDEIY  293 (326)
T ss_dssp             GGGSHHHH-----HHHHHCTTCCTHHHH------------------------HHHHHHHHT----TCCCCCCTTCCHHHH
T ss_pred             CCCCCHHH-----HHHhhccccchhhhH------------------------HHHHHHhhc----CCCCCCCCcccHHHH
Confidence            98642110     1111111110 0000                        000000000    000111245677899


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~  420 (432)
                      +||.+||+.||++|||+.|+++
T Consensus       294 ~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          294 MIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999985

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=9.9e-45  Score=346.10  Aligned_cols=270  Identities=20%  Similarity=0.265  Sum_probs=193.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---------hhhHhHHHHHHHHHHHHhcCC----C------
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---------KYREAAMTEIDVLELLKRYDR----S------  154 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~----~------  154 (432)
                      .++|++.+.||+|+||+||+|++  +|+.||||+++...         ...+.+.+|+.+++.++....    .      
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            46899999999999999999987  68999999997532         123678899999999983211    1      


Q ss_pred             -----------CCceeEeeccccc-------------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q 047395          155 -----------GSRCVQIRNWFDY-------------RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC  209 (432)
Q Consensus       155 -----------~~~iv~~~~~~~~-------------~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~a  209 (432)
                                 ||||+++++++..             .+.+|+||||+ +|++.+.+.+   ..+++..++.++.||+.|
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHH
Confidence                       4666666666664             78999999999 8866666644   358999999999999999


Q ss_pred             HHHHH-hCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcc
Q 047395          210 VAFMH-DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR  288 (432)
Q Consensus       210 L~~LH-~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~  288 (432)
                      |.||| ++||+||||||+|||++.++... .++++....      ...-.....+||+|||+|+.....  ..+||+.|+
T Consensus       174 L~~lH~~~~ivHrDlKp~NILl~~~~~~~-~~~~~~~~~------~~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y~  244 (336)
T 2vuw_A          174 LAVAEASLRFEHRDLHWGNVLLKKTSLKK-LHYTLNGKS------STIPSCGLQVSIIDYTLSRLERDG--IVVFCDVSM  244 (336)
T ss_dssp             HHHHHHHHCCBCSCCCGGGEEEEECSCSE-EEEEETTEE------EEEECTTEEEEECCCTTCBEEETT--EEECCCCTT
T ss_pred             HHHHHHhCCEeECCCCHHHEEEeccCCcc-eeeeccCcc------ccccCCCceEEEeeccccEecCCC--cEEEeeccc
Confidence            99999 99999999999999998765211 111111000      000112347999999999865533  458999999


Q ss_pred             hhHHHhCCCCCccchHHHHHHH-HHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCC
Q 047395          289 APEVILGLGWSYPCDMWSVGCI-LIELCSGEALFQTHENLE-HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEG  366 (432)
Q Consensus       289 aPE~~~~~~~~~~sDiwSlGvi-l~elltg~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  366 (432)
                      |||++.+.. +.++||||||++ .+++++|..||....... ....+.....                        ++..
T Consensus       245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------~~~~  299 (336)
T 2vuw_A          245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMT------------------------FKTK  299 (336)
T ss_dssp             CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCC------------------------CSSC
T ss_pred             ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhc------------------------cCcc
Confidence            999998876 899999998777 778889999984311000 0111100000                        0000


Q ss_pred             CCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHh-cCCCCC
Q 047395          367 ATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL-KHPFFT  425 (432)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL-~hp~f~  425 (432)
                      .                  .....+.+++++.+||.+||++|     ||+|+| +||||+
T Consensus       300 ~------------------~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          300 C------------------NTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             C------------------CSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             c------------------chhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            0                  00112346778999999999987     999999 999996

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=3.9e-42  Score=354.72  Aligned_cols=247  Identities=23%  Similarity=0.303  Sum_probs=197.5

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCC---CcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRET---GETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~---~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ...++|++.+.||+|+||.||+|.+..+   +..||||+++..  ....+.+.+|+.++..+.|     |||+++++++.
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~H-----pnIv~l~~~~~  461 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-----PHIVKLIGVIT  461 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCC-----TTBCCEEEEEC
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCC-----CCCCeEEEEEe
Confidence            3457899999999999999999998654   457999998642  3344678899999998876     99999999985


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      . +..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.          
T Consensus       462 ~-~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~----------  529 (656)
T 2j0j_A          462 E-NPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC----------  529 (656)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE----------
T ss_pred             c-CceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCC----------
Confidence            4 5689999999 899999998754 36899999999999999999999999999999999999876554          


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL  320 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~p  320 (432)
                                       +||+|||++.......    ....+|+.|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       530 -----------------vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~P  592 (656)
T 2j0j_A          530 -----------------VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  592 (656)
T ss_dssp             -----------------EEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             -----------------EEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCC
Confidence                             5555555554432211    12346788999999999899999999999999999997 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+..+....+......                                                ..+..+++.+.+|
T Consensus       593 f~~~~~~~~~~~i~~~~~~------------------------------------------------~~~~~~~~~l~~l  624 (656)
T 2j0j_A          593 FQGVKNNDVIGRIENGERL------------------------------------------------PMPPNCPPTLYSL  624 (656)
T ss_dssp             TTTCCHHHHHHHHHHTCCC------------------------------------------------CCCTTCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCC------------------------------------------------CCCccccHHHHHH
Confidence            9987776665554332110                                                0112456678999


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      |.+||+.||++|||+.|+++
T Consensus       625 i~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          625 MTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999985

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=4e-43  Score=332.37  Aligned_cols=246  Identities=21%  Similarity=0.278  Sum_probs=193.2

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      +...++|++.+.||+|+||.||+|.+..   .||+|+++...   ...+.+.+|+.++..++|     +||+++++++..
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~~iv~~~~~~~~  100 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRH-----ENVVLFMGACMS  100 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCC-----TTBCCCCEEEEC
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCC-----CCEeEEEEEEec
Confidence            3446789999999999999999998754   49999986432   233456788888888866     999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .+.+++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++ +             
T Consensus       101 ~~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~-------------  165 (319)
T 2y4i_B          101 PPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-N-------------  165 (319)
T ss_dssp             SSCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---------------
T ss_pred             CCceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-C-------------
Confidence            99999999999 899999997654 4699999999999999999999999999999999999975 2             


Q ss_pred             CCCCccccccCCCCCCeEEeecCCccccc--------CCccccccCCCcchhHHHhC---------CCCCccchHHHHHH
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEH--------QEHNYIVSTRHYRAPEVILG---------LGWSYPCDMWSVGC  309 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--------~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDiwSlGv  309 (432)
                                    +.++|+|||++....        .......||+.|+|||++.+         ..++.++|||||||
T Consensus       166 --------------~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~  231 (319)
T 2y4i_B          166 --------------GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT  231 (319)
T ss_dssp             ---------------CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHH
T ss_pred             --------------CCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHH
Confidence                          346666666554321        12223468999999999975         34788999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhh
Q 047395          310 ILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH  389 (432)
Q Consensus       310 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (432)
                      ++|+|++|..||...........+.....+..                                               .
T Consensus       232 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~  264 (319)
T 2y4i_B          232 IWYELHAREWPFKTQPAEAIIWQMGTGMKPNL-----------------------------------------------S  264 (319)
T ss_dssp             HHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCC-----------------------------------------------C
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHhccCCCCCC-----------------------------------------------C
Confidence            99999999999988776555443322111000                                               0


Q ss_pred             cccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       390 ~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                      ...++..+.+||.+||..||++|||+.++++
T Consensus       265 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          265 QIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             cCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            0124455889999999999999999999986

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=9.3e-43  Score=324.58  Aligned_cols=231  Identities=14%  Similarity=0.041  Sum_probs=180.8

Q ss_pred             eecCc-eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEe
Q 047395           87 FALGE-NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQI  161 (432)
Q Consensus        87 ~~~~~-~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~  161 (432)
                      +..|+ .+.++|++.+.||+|+||.||+|++..+++.||||+++...    .....+.+|+.++..+.|     +||+++
T Consensus        22 ~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----p~iv~~   96 (286)
T 3uqc_A           22 LVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDK-----PGVARV   96 (286)
T ss_dssp             CCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCC-----TTBCCE
T ss_pred             CCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCC-----CCccee
Confidence            45566 67789999999999999999999999999999999997532    333677888888877766     999999


Q ss_pred             ecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCC
Q 047395          162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       162 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      ++++...+..|+||||+ |++|.+++...    ....++..++.||+.||+|||++||+||||||+|||++.+|      
T Consensus        97 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g------  166 (286)
T 3uqc_A           97 LDVVHTRAGGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDG------  166 (286)
T ss_dssp             EEEEEETTEEEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTS------
T ss_pred             eEEEEECCcEEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCC------
Confidence            99999999999999999 89999999542    46667889999999999999999999999999999976544      


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                           .+||+++|                 |++|       ++.++|||||||++|+|++|+.|
T Consensus       167 ---------------------~~kl~~~~-----------------~~~~-------~~~~~Di~slG~il~elltg~~P  201 (286)
T 3uqc_A          167 ---------------------DVVLAYPA-----------------TMPD-------ANPQDDIRGIGASLYALLVNRWP  201 (286)
T ss_dssp             ---------------------CEEECSCC-----------------CCTT-------CCHHHHHHHHHHHHHHHHHSEEC
T ss_pred             ---------------------CEEEEecc-----------------ccCC-------CCchhHHHHHHHHHHHHHHCCCC
Confidence                                 45555333                 4443       78999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+..+.+.                      .....    ......                ........+++.+.+|
T Consensus       202 f~~~~~~~~~~----------------------~~~~~----~~~~~~----------------~~~~~~~~~~~~l~~l  239 (286)
T 3uqc_A          202 LPEAGVRSGLA----------------------PAERD----TAGQPI----------------EPADIDRDIPFQISAV  239 (286)
T ss_dssp             SCCCSBCCCSE----------------------ECCBC----TTSCBC----------------CHHHHCTTSCHHHHHH
T ss_pred             CCcCCcchhhH----------------------HHHHH----hccCCC----------------ChhhcccCCCHHHHHH
Confidence            98754321000                      00000    000000                0012234577889999


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 047395          401 LQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~  420 (432)
                      |.+||+.||++| |+.|+++
T Consensus       240 i~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          240 AARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHHHHCTTSSCC-CHHHHHH
T ss_pred             HHHHcccCCccC-CHHHHHH
Confidence            999999999999 9999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.7e-43  Score=362.55  Aligned_cols=244  Identities=25%  Similarity=0.361  Sum_probs=195.7

Q ss_pred             eecCceecCceEEEeeeecccceEEEEEEecC-CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           87 FALGENLTSRYKILRKIGEGTFGQVLDCLDRE-TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        87 ~~~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~-~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      +..|+.+.++|++.+.||+|+||+||+|++.. +++.||||++...  ......+.+|+.++..++|     +||+++++
T Consensus        72 ~~~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-----p~iv~~~~  146 (681)
T 2pzi_A           72 LNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVH-----PSIVQIFN  146 (681)
T ss_dssp             SCTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCC-----TTBCCEEE
T ss_pred             CCCCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCC-----CCcCeEee
Confidence            45678888999999999999999999999976 7899999998632  3344567889988888866     99999999


Q ss_pred             ccccCCe-----EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccc
Q 047395          164 WFDYRNH-----ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLK  237 (432)
Q Consensus       164 ~~~~~~~-----~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  237 (432)
                      ++...+.     .||||||+ |++|.+++..    .+++..++.++.||+.||.|||++||+||||||+|||++.     
T Consensus       147 ~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~-----  217 (681)
T 2pzi_A          147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE-----  217 (681)
T ss_dssp             EEEEECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS-----
T ss_pred             eEeecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeC-----
Confidence            9886554     79999999 8999987754    5999999999999999999999999999999999999742     


Q ss_pred             cCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhC
Q 047395          238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG  317 (432)
Q Consensus       238 ~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg  317 (432)
                                             ..+||+|||++...... ...+||+.|+|||++.+.. +.++|||||||++|+|++|
T Consensus       218 -----------------------~~~kl~DFG~a~~~~~~-~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g  272 (681)
T 2pzi_A          218 -----------------------EQLKLIDLGAVSRINSF-GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLD  272 (681)
T ss_dssp             -----------------------SCEEECCCTTCEETTCC-SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSC
T ss_pred             -----------------------CcEEEEecccchhcccC-CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhC
Confidence                                   26888999988765443 4567999999999998754 8999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHH
Q 047395          318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL  397 (432)
Q Consensus       318 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  397 (432)
                      ..||.+....           ..                       +.   ...                  ....++.+
T Consensus       273 ~~~~~~~~~~-----------~~-----------------------~~---~~~------------------~~~~~~~l  297 (681)
T 2pzi_A          273 LPTRNGRYVD-----------GL-----------------------PE---DDP------------------VLKTYDSY  297 (681)
T ss_dssp             CCEETTEECS-----------SC-----------------------CT---TCH------------------HHHHCHHH
T ss_pred             CCCCcccccc-----------cc-----------------------cc---ccc------------------ccccCHHH
Confidence            9988642110           00                       00   000                  00123558


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          398 IDLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       398 ~~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      .+||.+||+.||++||++.+++.|+|+
T Consensus       298 ~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          298 GRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             HHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             HHHHhhhccCChhhCCCHHHHHHHHHH
Confidence            899999999999999998888887765

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=100.00  E-value=9.4e-35  Score=294.44  Aligned_cols=182  Identities=19%  Similarity=0.111  Sum_probs=126.9

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeech-----------hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSI-----------KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-----------~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ..++.|+.|.+..++....|+.||+|++...           ....+.+.+|+++|+.+.+    |+||+++++++++++
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~----~~~i~~~~~~~ed~~  315 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPA----GFDAPAVLAHGENAQ  315 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCT----TCCCCCEEEEEECSS
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCC----CCCeeEEEEEEEECC
Confidence            4567888888888888889999999999632           2334568889999988843    499999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+||||||+ |++|.++|...+  ++++.   .|+.||+.||+|||++|||||||||+|||++.                
T Consensus       316 ~~yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~----------------  374 (569)
T 4azs_A          316 SGWLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDA----------------  374 (569)
T ss_dssp             EEEEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECT----------------
T ss_pred             EEEEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECC----------------
Confidence            999999999 999999998765  67664   48899999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~  319 (432)
                                 ++.+||+|||+|+....   .....+||+.|+|||++.+. +..++|+||+|++++++.++..
T Consensus       375 -----------dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          375 -----------RQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             -----------TSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred             -----------CCCEEEeecccCeeCCCCCccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccc
Confidence                       45677777777665432   23446899999999999874 5778999999999888766543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.95  E-value=1.9e-28  Score=246.86  Aligned_cols=180  Identities=21%  Similarity=0.201  Sum_probs=138.1

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---------hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      +...+.||+|+||+||+|.  ..++.+++|......         ...+.+.+|+++++.++|     +||+++..++..
T Consensus       338 ~~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h-----~nIv~~~~~~~~  410 (540)
T 3en9_A          338 KIPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKD-----FGIPAPYIFDVD  410 (540)
T ss_dssp             ----------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGG-----GTCCCCCEEEEE
T ss_pred             CCCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCC-----CCcCceEEEEEe
Confidence            3456799999999999994  457889999864211         123457899999999988     999955444445


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .+..|+||||+ |++|.+++..          +..++.||+.||.|||++||+||||||+|||++               
T Consensus       411 ~~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~---------------  465 (540)
T 3en9_A          411 LDNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD---------------  465 (540)
T ss_dssp             TTTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES---------------
T ss_pred             CCccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC---------------
Confidence            66679999999 8999999865          567999999999999999999999999999963               


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCCc----------cccccCCCcchhHHHhC--CCCCccchHHHHHHHHHHH
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH----------NYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~--~~~~~~sDiwSlGvil~el  314 (432)
                                  .  .+||+|||+++......          ...+||+.|+|||++.+  ..|+..+|+||..+-..+.
T Consensus       466 ------------~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~  531 (540)
T 3en9_A          466 ------------K--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKD  531 (540)
T ss_dssp             ------------S--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHH
T ss_pred             ------------C--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence                        3  78999999988765431          34689999999999987  5678889999999998888


Q ss_pred             HhCCCCCC
Q 047395          315 CSGEALFQ  322 (432)
Q Consensus       315 ltg~~pf~  322 (432)
                      +.++.+|.
T Consensus       532 v~~r~rY~  539 (540)
T 3en9_A          532 VERRARYV  539 (540)
T ss_dssp             HHTCSCCC
T ss_pred             HHhccccC
Confidence            87776663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.92  E-value=9.9e-26  Score=208.67  Aligned_cols=156  Identities=21%  Similarity=0.266  Sum_probs=118.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-------------------hhhHhHHHHHHHHHHHHhcCCCC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-------------------KYREAAMTEIDVLELLKRYDRSG  155 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-------------------~~~~~~~~E~~~l~~l~~~~~~~  155 (432)
                      ..|++.+.||+|+||.||+|.+ .+|+.||||+++...                   .....+.+|+.++..+.+     
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~-----  163 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG-----  163 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT-----
T ss_pred             eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC-----
Confidence            3467779999999999999999 889999999996422                   134567889999988862     


Q ss_pred             CceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCC
Q 047395          156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE  234 (432)
Q Consensus       156 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  234 (432)
                      .++..   ++.. +..|+||||+ |++|.+ +.      .  .....++.||+.||.|||++||+||||||+|||++   
T Consensus       164 ~~v~~---~~~~-~~~~lvmE~~~g~~L~~-l~------~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~---  227 (282)
T 1zar_A          164 LAVPK---VYAW-EGNAVLMELIDAKELYR-VR------V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS---  227 (282)
T ss_dssp             SSSCC---EEEE-ETTEEEEECCCCEEGGG-CC------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE---
T ss_pred             CCcCe---EEec-cceEEEEEecCCCcHHH-cc------h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE---
Confidence            33333   3333 4569999999 889987 31      1  23457999999999999999999999999999964   


Q ss_pred             ccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC----------CCCCccchH
Q 047395          235 YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG----------LGWSYPCDM  304 (432)
Q Consensus       235 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~sDi  304 (432)
                                               ++.++|+|||++.          .+..++|||++..          ..++..+|+
T Consensus       228 -------------------------~~~vkl~DFG~a~----------~~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~  272 (282)
T 1zar_A          228 -------------------------EEGIWIIDFPQSV----------EVGEEGWREILERDVRNIITYFSRTYRTEKDI  272 (282)
T ss_dssp             -------------------------TTEEEECCCTTCE----------ETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_pred             -------------------------CCcEEEEECCCCe----------ECCCCCHHHHHHHHHHHHHHHHHHhcCCCCCh
Confidence                                     4567888888774          4566899999854          334555666


Q ss_pred             HHH
Q 047395          305 WSV  307 (432)
Q Consensus       305 wSl  307 (432)
                      |.+
T Consensus       273 ~~~  275 (282)
T 1zar_A          273 NSA  275 (282)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.88  E-value=2.1e-22  Score=183.99  Aligned_cols=138  Identities=21%  Similarity=0.217  Sum_probs=106.6

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcE--EEEEEeechhh-------------------------hhHhHHHHHHHHHHH
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGET--VAIKVVRSIKK-------------------------YREAAMTEIDVLELL  148 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~--vaiK~~~~~~~-------------------------~~~~~~~E~~~l~~l  148 (432)
                      -|++.+.||+|+||.||+|.+..+|+.  ||||+++....                         ....+.+|+.++..+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            378999999999999999998778999  99999753211                         113578899999999


Q ss_pred             HhcCCCCCceeEeecccccCCeEEEEEccCC--C----CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCcEec
Q 047395          149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLG--P----SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH-DLRLIHT  221 (432)
Q Consensus       149 ~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~--~----~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHr  221 (432)
                      .+.....|.++   ..    +..+|||||++  |    +|.++...     .++..+..++.||+.||.||| ++||+||
T Consensus       128 ~~~~i~~p~~~---~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHr  195 (258)
T 1zth_A          128 KEAGVSVPQPY---TY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHA  195 (258)
T ss_dssp             HHTTCCCCCEE---EE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECS
T ss_pred             HhCCCCCCeEE---Ec----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence            88432233333   22    34689999994  3    78776533     345578889999999999999 9999999


Q ss_pred             cCCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccc
Q 047395          222 DLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE  274 (432)
Q Consensus       222 Dlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  274 (432)
                      ||||+|||++                           .  .++|+|||+|...
T Consensus       196 Dlkp~NILl~---------------------------~--~~~liDFG~a~~~  219 (258)
T 1zth_A          196 DLSEYNIMYI---------------------------D--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SCSTTSEEES---------------------------S--SEEECCCTTCEET
T ss_pred             CCCHHHEEEc---------------------------C--cEEEEECcccccC
Confidence            9999999963                           3  6899999988653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.77  E-value=4.1e-19  Score=168.74  Aligned_cols=145  Identities=19%  Similarity=0.199  Sum_probs=99.3

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh-----------------------hhHhHHHHHHHHHHHHhcCC
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-----------------------YREAAMTEIDVLELLKRYDR  153 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-----------------------~~~~~~~E~~~l~~l~~~~~  153 (432)
                      |++.++||.|++|.||+|.+. +|+.||||+++....                       ..-...+|...|..+.+...
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999975 699999999752110                       01123456777777765221


Q ss_pred             CCCceeEeecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeec
Q 047395          154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS  232 (432)
Q Consensus       154 ~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  232 (432)
                      .   +...++.    ...+|||||+ |.+|.++.        .......++.||+.+|.+||++|||||||||.|||+..
T Consensus       176 ~---vp~p~~~----~~~~LVME~i~G~~L~~l~--------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~  240 (397)
T 4gyi_A          176 P---VPEPIAQ----SRHTIVMSLVDALPMRQVS--------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIRE  240 (397)
T ss_dssp             S---CCCEEEE----ETTEEEEECCSCEEGGGCC--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEE
T ss_pred             C---CCeeeec----cCceEEEEecCCccHhhhc--------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeC
Confidence            1   1222221    1237999999 77775432        22345678999999999999999999999999999987


Q ss_pred             CCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccc
Q 047395          233 PEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE  274 (432)
Q Consensus       233 ~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  274 (432)
                      +|...-.+                 .....+.|+||+.+...
T Consensus       241 dgd~~d~~-----------------~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          241 EKDAEDPS-----------------SITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             EECSSCTT-----------------SEEEEEEECCCTTCEET
T ss_pred             CCCccccc-----------------ccccceEEEEeCCcccC
Confidence            65321110                 11124789999976543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.37  E-value=1.7e-12  Score=118.36  Aligned_cols=108  Identities=12%  Similarity=0.129  Sum_probs=83.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      ..|++...++.|+.+.||++...  ++.+++|+..... .....+.+|+.+++.+..    +..+.+++++....+..|+
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~----~~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEG----KLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT----TSCCCCEEEEEEETTEEEE
T ss_pred             ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhc----CCCCCeEEEEEecCCceEE
Confidence            46889999999999999999743  6899999986422 234468899999999865    2556777888778889999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD  215 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  215 (432)
                      |||++ |.+|.+.+.       +......++.+++.+|..||+
T Consensus        88 v~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           88 LMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             EEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhC
Confidence            99999 888877531       222345788999999999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.18  E-value=5.8e-11  Score=107.85  Aligned_cols=107  Identities=13%  Similarity=0.084  Sum_probs=73.5

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      ..|.+....+.|..+.||++.. .+|+.+++|+....  ....+.+|+.+++.+.+.   +-.+.+++.+...++..++|
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~---~~~vP~~~~~~~~~~~~~~v   93 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATT---GVPCAAVLDVVTEAGRDWLL   93 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTT---TCCBCCEEEEEECSSCEEEE
T ss_pred             CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhC---CCCCCeEEEeccCCCCCEEE
Confidence            3466554445666799999964 55778999997653  235678899999999763   12355677777777789999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR  217 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  217 (432)
                      ||++ |.+|.  ..     ..+   ...++.+++..|..||+..
T Consensus        94 ~e~i~G~~l~--~~-----~~~---~~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A           94 LGEVPGQDLL--SS-----HLA---PAEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             EECCSSEETT--TS-----CCC---HHHHHHHHHHHHHHHTTSC
T ss_pred             EEecCCcccC--cC-----cCC---HhHHHHHHHHHHHHHhCCC
Confidence            9999 77773  11     122   2356777888888888643

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.11  E-value=1.2e-10  Score=108.48  Aligned_cols=102  Identities=13%  Similarity=0.122  Sum_probs=70.8

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHh-cCCCCCceeEeecccccCC---eEEEEEc
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR-YDRSGSRCVQIRNWFDYRN---HICIVFE  176 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~-~~~~~~~iv~~~~~~~~~~---~~~lv~e  176 (432)
                      +.++.|....||++.     ..+++|+.... .....+.+|..+++.+.. ....   +..++......+   ..|+|||
T Consensus        26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~---vP~~~~~~~~~~~~~~~~~vm~   96 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLP---IPEVVFTGMPSETYQMSFAGFT   96 (304)
T ss_dssp             CEEEECSSEEEEEST-----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSC---CCCEEEECCCCSSCSCSCEEEE
T ss_pred             EecCCCCcceEEEEC-----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCC---CCceEeecCCCCCCCcceEEEc
Confidence            458999999999863     46899986543 345678899999988854 2222   333333333222   4588999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 047395          177 ML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD  215 (432)
Q Consensus       177 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  215 (432)
                      ++ |.+|.+....    .++.++...++.|++..|..||+
T Consensus        97 ~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A           97 KIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             CCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHc
Confidence            99 7777654332    37888888899999999988886

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.07  E-value=5.9e-10  Score=106.39  Aligned_cols=108  Identities=15%  Similarity=0.182  Sum_probs=76.3

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEee--chh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC---CeE
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR---NHI  171 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~--~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~---~~~  171 (432)
                      -++.|+.|.++.||++...  +..+++|+..  ...  .....+.+|..+++.|...   +..+.+++.++.+.   +..
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~---~vpvP~~~~~~~~~~~~g~~  116 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGT---DVPVAKMYALCEDESVIGRA  116 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTS---SSCCCCEEEEECCTTTTSSC
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcC---CCCCCcEEEECCCCCccCCe
Confidence            3678899999999998754  4678899875  322  2245788899999999862   23466666666655   458


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD  215 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  215 (432)
                      |+|||++ |..+.+..    ...++......++.+++..|..||+
T Consensus       117 ~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             EEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhC
Confidence            9999999 66664311    1247788889999999999999997

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.62  E-value=5.7e-07  Score=83.58  Aligned_cols=104  Identities=16%  Similarity=0.117  Sum_probs=67.5

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc-ccCCeEEEEEccC
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF-DYRNHICIVFEML  178 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~-~~~~~~~lv~e~~  178 (432)
                      ++.++.|....||+.     +..+++|+... ......+.+|..++..|.+...  -.+.+++.+. ...+..++|||++
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~--v~VP~~~~~~~~~~g~~~~v~e~i   95 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVK--VNIPQYVYIGKRSDGNPFVGYRKV   95 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCS--SBCCCEEEEEECTTSCEEEEEECC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCC--CCCCCeEeecccCCCceEEEEecc
Confidence            456788999999988     56789998543 3345678899999999976311  1233444443 2346678999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 047395          179 -GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD  215 (432)
Q Consensus       179 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  215 (432)
                       |.+|.+..-.    .++......++.++...|..||+
T Consensus        96 ~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~  129 (306)
T 3tdw_A           96 QGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSA  129 (306)
T ss_dssp             CSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhc
Confidence             7777653221    24555555566666666666654

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.48  E-value=1.5e-06  Score=79.01  Aligned_cols=102  Identities=13%  Similarity=0.190  Sum_probs=69.7

Q ss_pred             eeecccce-EEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-C
Q 047395          102 KIGEGTFG-QVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-G  179 (432)
Q Consensus       102 ~lg~G~~g-~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~  179 (432)
                      .+..|..| .||+......+..+++|+-...  ....+.+|...|..|...    -.+.+++.+..+.+..++|||++ |
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~----vPVP~v~~~~~~~~~~~lvme~l~G  104 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAF----MPLPTIKHFIRTPDDAWLLTTAIPG  104 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTT----SCCCCEEEEEEETTEEEEEEECCCS
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccC----CCcCeEEEEEEECCeEEEEEEeeCC
Confidence            34455554 6999887777888999987543  234677899999888642    23566777777888999999999 7


Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 047395          180 PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD  215 (432)
Q Consensus       180 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  215 (432)
                      .++.+.....      ......+..++...|.-||+
T Consensus       105 ~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~  134 (272)
T 4gkh_A          105 KTAFQVLEEY------PDSGENIVDALAVFLRRLHS  134 (272)
T ss_dssp             EEHHHHHHHC------GGGHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccCC------HHHHHHHHHHHHHHHHHhcC
Confidence            7877765432      12233455666666666663

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.27  E-value=5.9e-06  Score=79.61  Aligned_cols=76  Identities=20%  Similarity=0.142  Sum_probs=48.2

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeechhh--------hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--------YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+.||.|..+.||++....+++.++||.......        ..+....|.+++..+.....  ..+.+++.+.  ....
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~--~~vP~~~~~d--~~~~  110 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVP--HLVPRVFYSD--TEMA  110 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCG--GGSCCEEEEE--TTTT
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCC--CCcCeEEEEc--CCcc
Confidence            5689999999999997666678999998643211        23456789999988865311  2233444332  3345


Q ss_pred             EEEEccCC
Q 047395          172 CIVFEMLG  179 (432)
Q Consensus       172 ~lv~e~~~  179 (432)
                      ++|||++.
T Consensus       111 ~lvmE~l~  118 (397)
T 2olc_A          111 VTVMEDLS  118 (397)
T ss_dssp             EEEECCCT
T ss_pred             EEEEEeCC
Confidence            79999993

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.11  E-value=4.7e-05  Score=71.46  Aligned_cols=77  Identities=12%  Similarity=0.188  Sum_probs=44.6

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEee-c--ccccCCeEEEEEc
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIR-N--WFDYRNHICIVFE  176 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~-~--~~~~~~~~~lv~e  176 (432)
                      ++.|+.|..+.||++...  +..+++|+....   ......|..+++.|.......|.++... +  +....+..++|||
T Consensus        37 ~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD--SGAVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             EEECC----CEEEEEEET--TEEEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eeeccccccCcEEEEEeC--CCCEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            346666778899998753  345899998752   2344567788888876433223333211 1  1123567899999


Q ss_pred             cC-CCC
Q 047395          177 ML-GPS  181 (432)
Q Consensus       177 ~~-~~~  181 (432)
                      |+ |.+
T Consensus       112 ~i~G~~  117 (346)
T 2q83_A          112 WIEGRP  117 (346)
T ss_dssp             CCCCBC
T ss_pred             eecCcc
Confidence            99 543

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.11  E-value=9.2e-06  Score=76.99  Aligned_cols=82  Identities=10%  Similarity=0.110  Sum_probs=54.3

Q ss_pred             EEEeee-ecccceEEEEEEec--C----CCcEEEEEEeechh---h-hhHhHHHHHHHHHHHHhc-CCCCCceeEeeccc
Q 047395           98 KILRKI-GEGTFGQVLDCLDR--E----TGETVAIKVVRSIK---K-YREAAMTEIDVLELLKRY-DRSGSRCVQIRNWF  165 (432)
Q Consensus        98 ~i~~~l-g~G~~g~V~~a~~~--~----~~~~vaiK~~~~~~---~-~~~~~~~E~~~l~~l~~~-~~~~~~iv~~~~~~  165 (432)
                      ...+.| +.|....+|+....  .    +++.+++|+.....   . ....+.+|..+++.|... ..   .+.+++.+.
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~v---pvP~v~~~~   99 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDV---PVPRVRWIE   99 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCS---CCCCEEEEE
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCC---CCCcEEEEc
Confidence            345678 88889999988643  1    25679999865433   1 135678899999999874 22   344555554


Q ss_pred             ccC---CeEEEEEccC-CCCH
Q 047395          166 DYR---NHICIVFEML-GPSL  182 (432)
Q Consensus       166 ~~~---~~~~lv~e~~-~~~L  182 (432)
                      ...   +..|+|||++ |.++
T Consensus       100 ~~~~~~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A          100 TTGDVLGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             CSSTTTSSCEEEEECCCCBCC
T ss_pred             cCCCccCCceEEEEecCCCCh
Confidence            443   4568999999 6443

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.76  E-value=0.00016  Score=66.72  Aligned_cols=69  Identities=9%  Similarity=-0.037  Sum_probs=45.0

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-  178 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-  178 (432)
                      ++.|+.|....+|++      +.+++|+............+|..+++.+...... |.   ++....  ..-++++||+ 
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~-P~---~~~~~~--~~~~~v~e~i~   90 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVS-PE---VLHVDP--ATGVMVTRYIA   90 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSS-CC---EEEECT--TTCCEEEECCT
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCC-Cc---eEEEEC--CCCEEEEeecC
Confidence            578899999999998      4588998765322223346799999988875433 43   333332  2236889998 


Q ss_pred             CC
Q 047395          179 GP  180 (432)
Q Consensus       179 ~~  180 (432)
                      +|
T Consensus        91 ~g   92 (301)
T 3dxq_A           91 GA   92 (301)
T ss_dssp             TC
T ss_pred             CC
Confidence            55

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.69  E-value=0.00034  Score=64.74  Aligned_cols=77  Identities=21%  Similarity=0.231  Sum_probs=58.0

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      -.+.|+.|....+|+...  ++..+++|+....  ....+..|...|+.|....  ...+.+++.+....+..++|||++
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~--~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS--YRSMFRAEADQLALLAKTN--SINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTT--SSBCCCEEEEEECSSEEEEEEECC
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhC--CCCcceEEEEeecCCceEEEEEec
Confidence            356889999999999874  4678899987543  3556788999999997631  244666776666678899999999


Q ss_pred             -CCC
Q 047395          179 -GPS  181 (432)
Q Consensus       179 -~~~  181 (432)
                       |..
T Consensus       114 ~G~~  117 (312)
T 3jr1_A          114 NKSK  117 (312)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence             554

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.66  E-value=0.00036  Score=59.97  Aligned_cols=98  Identities=13%  Similarity=0.008  Sum_probs=60.7

Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccccccCC
Q 047395          180 PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP  258 (432)
Q Consensus       180 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~  258 (432)
                      -+|.++|...+ .++++++++.++.|.+.+|.-+- .+.-..+=+.|..|++..+|.+...                   
T Consensus        33 vSL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~-------------------   92 (229)
T 2yle_A           33 LSLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLA-------------------   92 (229)
T ss_dssp             EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEEC-------------------
T ss_pred             ccHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceecc-------------------
Confidence            37999999876 68999999999999999988762 1111123344678887665544321                   


Q ss_pred             CCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh
Q 047395          259 KSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       259 ~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt  316 (432)
                              + ..+         ......+.|||... ...+.+.=|||||+++|..+-
T Consensus        93 --------~-~~s---------~~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A           93 --------P-AAD---------DAGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             --------C-C---------------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             --------c-ccc---------cccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence                    1 000         01123466787653 234677889999999999875

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.58  E-value=0.00033  Score=67.86  Aligned_cols=75  Identities=17%  Similarity=0.270  Sum_probs=44.6

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeech-----hh---hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-----KK---YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-----~~---~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++.||.|..+.||++..  +++.++||.....     ..   .......|.+++..+....  ...+.+++.+.  .+..
T Consensus        39 i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~--~~~vP~v~~~~--~~~~  112 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLS--PDHVPEVYHFD--RTMA  112 (420)
T ss_dssp             EEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHS--GGGSCCEEEEE--TTTT
T ss_pred             EEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhC--CCCCCeEEEEC--CCcc
Confidence            56789999999999953  4678999943210     11   0122334555555543321  12344555443  3556


Q ss_pred             EEEEccC-CC
Q 047395          172 CIVFEML-GP  180 (432)
Q Consensus       172 ~lv~e~~-~~  180 (432)
                      ++|||++ ++
T Consensus       113 ~lv~e~l~~g  122 (420)
T 2pyw_A          113 LIGMRYLEPP  122 (420)
T ss_dssp             EEEECCCCTT
T ss_pred             EEEEeecCCc
Confidence            8999999 65

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.40  E-value=0.00089  Score=62.49  Aligned_cols=78  Identities=12%  Similarity=0.095  Sum_probs=40.7

Q ss_pred             eeeecccceE-EEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-
Q 047395          101 RKIGEGTFGQ-VLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-  178 (432)
Q Consensus       101 ~~lg~G~~g~-V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-  178 (432)
                      +.|+.|+... +|+... .++..+++|......  .+....|+.++..+.....   .+.+++.+....+  +++||++ 
T Consensus        24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~---~vP~v~~~d~~~g--~ll~e~l~   95 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDI---SAPEIYAEEHARG--LLLIEDLG   95 (333)
T ss_dssp             CC--------CCEEEEC-TTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTC---BCCCEEEEETTTT--EEEECCCC
T ss_pred             eECCCCCCCceEEEEEc-CCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCC---CCCceeeecCCCC--EEEEeeCC
Confidence            4565555554 666642 235677787644321  1456678899988876432   2344444433333  6899999 


Q ss_pred             CCCHHHHH
Q 047395          179 GPSLYDFL  186 (432)
Q Consensus       179 ~~~L~~~l  186 (432)
                      +.++.+.+
T Consensus        96 ~~~l~~~l  103 (333)
T 3csv_A           96 DALFTEVI  103 (333)
T ss_dssp             SCBHHHHH
T ss_pred             CcchHHHh
Confidence            55665544

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.36  E-value=0.0015  Score=60.71  Aligned_cols=75  Identities=13%  Similarity=0.137  Sum_probs=48.1

Q ss_pred             eeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc-----cccCCeEEEEE
Q 047395          101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW-----FDYRNHICIVF  175 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~-----~~~~~~~~lv~  175 (432)
                      ..|+ |....||++.. .+|+.+++|+........+.+..|..++..|......   +++++..     ....+..++||
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~---vp~~~~~~g~~~~~~~g~~~~l~  106 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVP---VAAPVAFNGQTLLNHQGFYFAVF  106 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCS---BCCCCCBTTBSCEEETTEEEEEE
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCe---ecceeecCCcEEEEECCEEEEEE
Confidence            3456 77889998753 3466799999864333345677899999988764322   2333322     12245678899


Q ss_pred             ccCCC
Q 047395          176 EMLGP  180 (432)
Q Consensus       176 e~~~~  180 (432)
                      +++.|
T Consensus       107 ~~i~G  111 (328)
T 1zyl_A          107 PSVGG  111 (328)
T ss_dssp             ECCCC
T ss_pred             EecCC
Confidence            99943

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.31  E-value=0.0032  Score=57.41  Aligned_cols=77  Identities=14%  Similarity=0.090  Sum_probs=52.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      ....-++.+|.|..+.||++.. .+|+.|++|+..... .....+..|...|+.|.....  ..+.+++.+.    .-++
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~--vpvP~v~~~~----~~~l   87 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFG--SPVPQVAGWD----DRTL   87 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTT--CCSCCEEEEE----TTEE
T ss_pred             CCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCC--CCcceEEecc----CceE
Confidence            3456678999999999999974 568999999865332 223457789999999865211  1233444332    2368


Q ss_pred             EEccC
Q 047395          174 VFEML  178 (432)
Q Consensus       174 v~e~~  178 (432)
                      |||++
T Consensus        88 v~e~l   92 (288)
T 3f7w_A           88 AMEWV   92 (288)
T ss_dssp             EEECC
T ss_pred             EEEee
Confidence            99988

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.30  E-value=0.002  Score=59.72  Aligned_cols=80  Identities=9%  Similarity=0.024  Sum_probs=47.0

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeec---ccccCCeEEEEE
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRN---WFDYRNHICIVF  175 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~---~~~~~~~~~lv~  175 (432)
                      -++.|+.|....+|++... ++ .+++|+.... ...+.+..|..++..|.......|.++...+   +....+..+++|
T Consensus        26 ~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~  102 (322)
T 2ppq_A           26 SYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALI  102 (322)
T ss_dssp             EEEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEE
T ss_pred             EeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEE
Confidence            3567888888999998643 33 6889988652 2234567789999988874333333332110   111235678999


Q ss_pred             ccC-CCC
Q 047395          176 EML-GPS  181 (432)
Q Consensus       176 e~~-~~~  181 (432)
                      +++ |..
T Consensus       103 ~~l~G~~  109 (322)
T 2ppq_A          103 SFLEGMW  109 (322)
T ss_dssp             ECCCCBC
T ss_pred             EeCCCcC
Confidence            999 543

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.09  E-value=0.0022  Score=62.09  Aligned_cols=70  Identities=16%  Similarity=0.156  Sum_probs=47.0

Q ss_pred             EeeeecccceEEEEEEecC-------CCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395          100 LRKIGEGTFGQVLDCLDRE-------TGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~-------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++.|+.|....||++....       .++.+++|+.... ...+.+..|..++..|.....    ..++++.+..    .
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~----~P~l~~~~~~----g  148 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHL----GPKLYGIFSG----G  148 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTS----SSCEEEEETT----E
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCC----CCcEEEEeCC----C
Confidence            5678889899999997642       2578999998431 111455679999999887432    2344554432    2


Q ss_pred             EEEccC
Q 047395          173 IVFEML  178 (432)
Q Consensus       173 lv~e~~  178 (432)
                      +|+||+
T Consensus       149 ~v~e~l  154 (429)
T 1nw1_A          149 RLEEYI  154 (429)
T ss_dssp             EEECCC
T ss_pred             EEEEEe
Confidence            889998

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.04  E-value=0.0022  Score=60.74  Aligned_cols=73  Identities=19%  Similarity=0.268  Sum_probs=43.3

Q ss_pred             EeeeecccceEEEEEEecC--------CCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395          100 LRKIGEGTFGQVLDCLDRE--------TGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~--------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+.|+.|....+|++....        .++.+++|+.............|..+++.|..... .|   +++..+.  +  
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~-~P---~~~~~~~--~--  109 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKI-AP---QLLNTFN--G--  109 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTS-SC---CEEEEET--T--
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCC-CC---ceEEecC--C--
Confidence            4577888888999987543        13689999875432222234679999999887432 23   3443332  2  


Q ss_pred             EEEEccC-CC
Q 047395          172 CIVFEML-GP  180 (432)
Q Consensus       172 ~lv~e~~-~~  180 (432)
                      ++||||+ |.
T Consensus       110 ~~v~e~i~G~  119 (369)
T 3c5i_A          110 GRIEEWLYGD  119 (369)
T ss_dssp             EEEEECCCSE
T ss_pred             cEEEEEecCC
Confidence            6899998 53

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.01  E-value=0.0013  Score=62.48  Aligned_cols=73  Identities=11%  Similarity=0.125  Sum_probs=44.3

Q ss_pred             eeeecccceEEEEEEecC-------CCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395          101 RKIGEGTFGQVLDCLDRE-------TGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~~-------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      +.|..|-...+|++....       +++.+++|+............+|..+++.|......    .++++.+..    .+
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~----P~ll~~~~~----g~  127 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLG----PQLYGVFPE----GR  127 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSS----CCEEEEETT----EE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCC----CeEEEEcCC----cc
Confidence            467778888899987642       357899998643322345567899999999875432    344555543    28


Q ss_pred             EEccC-CCC
Q 047395          174 VFEML-GPS  181 (432)
Q Consensus       174 v~e~~-~~~  181 (432)
                      ||||+ |.+
T Consensus       128 v~e~i~G~~  136 (379)
T 3feg_A          128 LEQYIPSRP  136 (379)
T ss_dssp             EEECCSEEE
T ss_pred             EEEEecCcc
Confidence            99998 533

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.67  E-value=0.016  Score=54.07  Aligned_cols=70  Identities=13%  Similarity=0.149  Sum_probs=43.8

Q ss_pred             ecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecc------cccCCeEEEEEcc
Q 047395          104 GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNW------FDYRNHICIVFEM  177 (432)
Q Consensus       104 g~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~------~~~~~~~~lv~e~  177 (432)
                      |.|....||++.. .+| .+++|+.....     ...|+.++..|......  .+++.+..      ....+..++||+|
T Consensus        32 G~g~~N~vy~v~~-~~g-~~vLK~~~~~~-----~~~E~~~l~~L~~~g~~--~vp~pi~~~~G~~~~~~~g~~~~l~~~  102 (339)
T 3i1a_A           32 GADTNAFAYQADS-ESK-SYFIKLKYGYH-----DEINLSIIRLLHDSGIK--EIIFPIHTLEAKLFQQLKHFKIIAYPF  102 (339)
T ss_dssp             TSCSSCEEEEEEC-SSC-EEEEEEEECSS-----CCHHHHHHHHHHHTTCC--SSCCCCCCTTSCSSEECSSEEEEEEEC
T ss_pred             cCccccceEEEEe-CCC-CEEEEEecCcc-----chHHHHHHHHHHhcCCc--ccccceecCCCCEEEEECCEEEEEEec
Confidence            3334678999864 334 89999876533     25688888888764322  13333322      2235778999999


Q ss_pred             C-CCCH
Q 047395          178 L-GPSL  182 (432)
Q Consensus       178 ~-~~~L  182 (432)
                      + |..+
T Consensus       103 i~G~~~  108 (339)
T 3i1a_A          103 IHAPNG  108 (339)
T ss_dssp             CCCCBT
T ss_pred             cCCCcC
Confidence            9 6544

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.62  E-value=0.011  Score=57.65  Aligned_cols=73  Identities=14%  Similarity=0.110  Sum_probs=45.7

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML  178 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  178 (432)
                      -++.|+.|-...+|++.....+..+++|+........-...+|..++..|.....    ..++++.+..    .+||||+
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl----~P~ll~~~~~----G~v~e~I  183 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNI----AKKIYVFFTN----GRIEEFM  183 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSS----BCCEEEEETT----EEEEECC
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCC----CCCEEEEeCC----eEEEEee
Confidence            3567888989999999865445789999875422111122589999999876322    2345555532    2599998


Q ss_pred             -C
Q 047395          179 -G  179 (432)
Q Consensus       179 -~  179 (432)
                       |
T Consensus       184 ~G  185 (458)
T 2qg7_A          184 DG  185 (458)
T ss_dssp             CS
T ss_pred             CC
Confidence             5

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=95.77  E-value=0.024  Score=54.61  Aligned_cols=74  Identities=15%  Similarity=0.140  Sum_probs=47.3

Q ss_pred             EeeeecccceEEEEEEecCC-------CcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395          100 LRKIGEGTFGQVLDCLDRET-------GETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~-------~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++.|..|-...+|++.....       ++.+++|+........-...+|..+++.|..... .|   ++++.+.  +  +
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi-~P---~l~~~~~--~--~  146 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINI-AP---NIIADFP--E--G  146 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTS-SC---CEEEEET--T--E
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCC-CC---CEEEEcC--C--C
Confidence            45677788889999876521       5789999875432222234689999999987433 23   3343332  2  6


Q ss_pred             EEEccC-CCC
Q 047395          173 IVFEML-GPS  181 (432)
Q Consensus       173 lv~e~~-~~~  181 (432)
                      +||||+ |.+
T Consensus       147 ~I~efI~G~~  156 (424)
T 3mes_A          147 RIEEFIDGEP  156 (424)
T ss_dssp             EEEECCCSEE
T ss_pred             EEEEEeCCcc
Confidence            889999 543

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=94.80  E-value=0.15  Score=48.55  Aligned_cols=30  Identities=13%  Similarity=0.258  Sum_probs=21.5

Q ss_pred             EeeeecccceEEEEEEecC-------CCcEEEEEEee
Q 047395          100 LRKIGEGTFGQVLDCLDRE-------TGETVAIKVVR  129 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~-------~~~~vaiK~~~  129 (432)
                      ++.|+-|-.-.+|++....       ..+.|.+++.-
T Consensus        57 v~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g   93 (401)
T 3g15_A           57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG   93 (401)
T ss_dssp             EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEE
T ss_pred             EEEeCCccccceEEEEECCCCcccccCCCeEEEEeCC
Confidence            5577778888999997543       23578888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	432
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-59
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-54
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-54
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-53
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-53
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-52
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-52
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-52
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	8e-52
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-51
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	8e-51
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-50
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-49
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-49
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-49
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-48
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-48
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-48
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-48
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-47
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-47
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-47
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	6e-47
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-46
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-45
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-45
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-44
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-43
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-43
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-42
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	5e-42
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-41
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-41
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-40
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-38
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-38
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	8e-38
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-37
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-36
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-35
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-34
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-33
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	7e-32
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-32
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	7e-31
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-30
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-30
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-30
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-30
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-29
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-29
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-29
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	7e-29
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-28
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-27
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-27
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-27
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	9e-27
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-26
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-26
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-25
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-24
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	3e-15
d1nw1a_	395	d.144.1.8 (A:) Choline kinase {Caenorhabditis eleg	0.004

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (495), Expect = 2e-59
 Identities = 68/338 (20%), Positives = 115/338 (34%), Gaps = 44/338 (13%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
              ++ + ++G G  G V     + +G  +A K++        R   + E+ VL      
Sbjct: 5   DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-- 62

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                  V     F     I I  E M G SL   L+K      P  ++ ++   +++ +
Sbjct: 63  ---SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGL 117

Query: 211 AFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
            ++ +  +++H D+KP NIL  S   +K+                            DFG
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGEIKL---------------------------CDFG 150

Query: 270 -STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
            S        N  V TR Y +PE + G  +S   D+WS+G  L+E+  G       +  E
Sbjct: 151 VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
              M    +         R   P       G    P  A        V + P      + 
Sbjct: 211 LELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVF 270

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
            ++       D +   L  +P+ R      + H F  R
Sbjct: 271 SLE-----FQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 4e-54
 Identities = 85/340 (25%), Positives = 150/340 (44%), Gaps = 45/340 (13%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRY 151
           S+Y+ L KIG+GTFG+V     R+TG+ VA+K V      + +   A+ EI +L+LLK  
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 152 DRS---GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
           +          +   +   +  I +VF+     L   L  N    F +  ++ + + LL 
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG-LLSNVLVKFTLSEIKRVMQMLLN 128

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H  +++H D+K  N+L      LK+ D+ +                    +    
Sbjct: 129 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-------------------RAFSL 169

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
              +  ++  N  V T  YR PE++LG   +  P D+W  GCI+ E+ +   + Q +   
Sbjct: 170 AKNSQPNRYTNR-VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 228

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
             LA++ ++ G I   +   VD    +   +  L   +    ++ +KA ++ P       
Sbjct: 229 HQLALISQLCGSITPEVWPNVDNY--ELYEKLELVKGQKRKVKDRLKAYVRDP------- 279

Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                   Y +DL+  LL  DP+ R+ + DAL H FF  D
Sbjct: 280 --------YALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 311

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  181 bits (460), Expect = 5e-54
 Identities = 80/342 (23%), Positives = 129/342 (37%), Gaps = 80/342 (23%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLK 149
           +++   Y I  ++G G FG V    +R TG   A K V +     +E    EI  + +L+
Sbjct: 22  DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 81

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                    V + + F+  N + +++E M G  L++ +   +      D   E  RQ+ +
Sbjct: 82  H-----PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCK 135

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            +  MH+   +H DLKPENI+F +                           S+ +K+IDF
Sbjct: 136 GLCHMHENNYVHLDLKPENIMFTTKR-------------------------SNELKLIDF 170

Query: 269 GSTAY--EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
           G TA+    Q       T  + APEV  G    Y  DMWSVG +   L SG + F    +
Sbjct: 171 GLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 230

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
            E L  ++     +       + +                                    
Sbjct: 231 DETLRNVKSCDWNMDDSAFSGISEDG---------------------------------- 256

Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                       D ++ LL  DP++R+T H AL+HP+ T   
Sbjct: 257 -----------KDFIRKLLLADPNTRMTIHQALEHPWLTPGN 287

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (456), Expect = 2e-53
 Identities = 86/340 (25%), Positives = 137/340 (40%), Gaps = 45/340 (13%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLK 149
           ++  RY  L  IGEG +G V    D      VAIK +   +   Y +  + EI +L   +
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 64

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
             +  G   +      +    + +V  ++G  LY  L+    +    D +     Q+L  
Sbjct: 65  HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRG 121

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + ++H   ++H DLKP N+L  +   LKI D+ +                    +V D  
Sbjct: 122 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL-------------------ARVADPD 162

Query: 270 STAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
                       V+TR YRAPE++L   G++   D+WSVGCIL E+ S   +F     L+
Sbjct: 163 HD--HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 220

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
            L  +  +LG   Q  L  +        R   L  P             K     N +  
Sbjct: 221 QLNHILGILGSPSQEDLNCIINLKA---RNYLLSLPH------------KNKVPWNRLFP 265

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
           + D  A   +DLL  +L ++P  R+    AL HP+  + Y
Sbjct: 266 NADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 302

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  180 bits (457), Expect = 2e-53
 Identities = 73/341 (21%), Positives = 130/341 (38%), Gaps = 80/341 (23%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKR 150
           ++   Y IL ++G G FG V  C+++ TG     K +       +     EI ++  L  
Sbjct: 26  SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH 85

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                 + + + + F+ +  + ++ E + G  L+D +   +Y+      V    RQ  E 
Sbjct: 86  -----PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEG 139

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +  MH+  ++H D+KPENI+                             K+S++K+IDFG
Sbjct: 140 LKHMHEHSIVHLDIKPENIMC-------------------------ETKKASSVKIIDFG 174

Query: 270 STAY--EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
                   +      +T  + APE++      +  DMW++G +   L SG + F   ++L
Sbjct: 175 LATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL 234

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
           E L  ++R      +     V   A                                   
Sbjct: 235 ETLQNVKRCDWEFDEDAFSSVSPEA----------------------------------- 259

Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                      D ++ LL+ +P  RLT HDAL+HP+   D+
Sbjct: 260 ----------KDFIKNLLQKEPRKRLTVHDALEHPWLKGDH 290

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  177 bits (449), Expect = 2e-52
 Identities = 97/355 (27%), Positives = 156/355 (43%), Gaps = 46/355 (12%)

Query: 89  LGENLT-SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLEL 147
            GE    +RY ++RK+G G F  V    D      VA+K+VR  K Y EAA  EI +L+ 
Sbjct: 6   KGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQR 65

Query: 148 LKRYDRSGSRCVQIRN----------WFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
           +   D +    +   +                H+ +VFE+LG +L   ++K  +R  P+ 
Sbjct: 66  VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 125

Query: 198 LVREIGRQLLECVAFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
            V++I +QLL  + +MH    +IHTD+KPEN+L                     +     
Sbjct: 126 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL---------------------MEIVDS 164

Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
                 IK+ D G+  +  + +   + TR YR+PEV+LG  W    D+WS  C++ EL +
Sbjct: 165 PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 224

Query: 317 GEALFQTHE------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSR 370
           G+ LF+  E      + +H+A +  +LG +P ++L+        F  RG L         
Sbjct: 225 GDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLR-------N 277

Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
            S      L  +     +     A  + D L  +L+ DP  R  A   + HP+  
Sbjct: 278 ISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 332

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (444), Expect = 4e-52
 Identities = 84/338 (24%), Positives = 140/338 (41%), Gaps = 54/338 (15%)

Query: 94  TSRYKILRKIGEGTFGQVLDCLDRET-GETVAIKVVR---SIKKYREAAMTEIDVLELLK 149
             +Y+ + +IGEG +G+V    D +  G  VA+K VR     +    + + E+ VL  L+
Sbjct: 6   DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 65

Query: 150 RYDRSG---SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
            ++         V   +  D    + +VFE +   L  +L K      P + ++++  QL
Sbjct: 66  TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 125

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L  + F+H  R++H DLKP+NIL  S   +K+ D                          
Sbjct: 126 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD-------------------------F 160

Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
                         +V T  YRAPEV+L   ++ P D+WSVGCI  E+   + LF+   +
Sbjct: 161 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 220

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           ++ L  +  V+G   +                   DWP                 ++  V
Sbjct: 221 VDQLGKILDVIGLPGEE------------------DWPRDVALPRQAFHSKSAQPIEKFV 262

Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
              +D       DLL   L ++P+ R++A+ AL HP+F
Sbjct: 263 -TDIDELG---KDLLLKCLTFNPAKRISAYSALSHPYF 296

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (440), Expect = 5e-52
 Identities = 65/339 (19%), Positives = 117/339 (34%), Gaps = 89/339 (26%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKR 150
             ++I R +G+G FG V    ++++   +A+KV+   +            E+++   L+ 
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   +++  +F     + ++ E     ++Y  L+K     F          +L   
Sbjct: 66  P-----NILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANA 118

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +++ H  R+IH D+KPEN+L  S   LKI                            DFG
Sbjct: 119 LSYCHSKRVIHRDIKPENLLLGSAGELKI---------------------------ADFG 151

Query: 270 -STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
            S          +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E
Sbjct: 152 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 211

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
               + RV    P  + +                                          
Sbjct: 212 TYKRISRVEFTFPDFVTEG----------------------------------------- 230

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                     DL+  LL+++PS R    + L+HP+ T +
Sbjct: 231 --------ARDLISRLLKHNPSQRPMLREVLEHPWITAN 261

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (444), Expect = 8e-52
 Identities = 72/344 (20%), Positives = 132/344 (38%), Gaps = 81/344 (23%)

Query: 93  LTSRYKILRK-IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
           +   YK+  + +G G  G+VL   ++ T E  A+K+++   K R     E+++     + 
Sbjct: 9   IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQC 64

Query: 152 DRSGSRCVQIRNWFDY----RNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
                  V+I + ++     R  + IV E + G  L+  ++    + F      EI + +
Sbjct: 65  PH----IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 120

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
            E + ++H + + H D+KPEN+L+ S     I                        +K+ 
Sbjct: 121 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAI------------------------LKLT 156

Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           DFG       H        T +Y APEV+    +   CDMWS+G I+  L  G   F ++
Sbjct: 157 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 216

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
             L     M+                     +R G+ ++P    S  S +          
Sbjct: 217 HGLAISPGMKTR-------------------IRMGQYEFPNPEWSEVSEEV--------- 248

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                          L++ LL+ +P+ R+T  + + HP+  +  
Sbjct: 249 -------------KMLIRNLLKTEPTQRMTITEFMNHPWIMQST 279

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (442), Expect = 1e-51
 Identities = 65/343 (18%), Positives = 121/343 (35%), Gaps = 79/343 (23%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
           + L  +Y I   +G G FG V  C++  + +T   K V+     +     EI +L + + 
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH 60

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                   + +   F+    + ++FE + G  +++ +  + +       +     Q+ E 
Sbjct: 61  -----RNILHLHESFESMEELVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCEA 114

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           + F+H   + H D++PENI++ +                              IK+I+FG
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRRSST-------------------------IKIIEFG 149

Query: 270 STAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
                    N+  + +   Y APEV      S   DMWS+G ++  L SG   F    N 
Sbjct: 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
           + +  +        +   K +   A                                   
Sbjct: 210 QIIENIMNAEYTFDEEAFKEISIEA----------------------------------- 234

Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYR 430
                     +D +  LL  +  SR+TA +AL+HP+  +   R
Sbjct: 235 ----------MDFVDRLLVKERKSRMTASEALQHPWLKQKIER 267

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (434), Expect = 8e-51
 Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 53/333 (15%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYD 152
            ++ + KIGEGT+G V    ++ TGE VA+K +R     +     A+ EI +L+ L   +
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                 V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF
Sbjct: 63  -----IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H  R++H DLKP+N+L  +   +K+ D+ +       V                     
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT------------------- 158

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
                + + V T  YRAPE++LG   +S   D+WS+GCI  E+ +  ALF     ++ L 
Sbjct: 159 -----YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
            + R LG   + +      P    +   +  +P+               +  + V+  +D
Sbjct: 214 RIFRTLGTPDEVVW-----PGVTSMPDYKPSFPK------------WARQDFSKVVPPLD 256

Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                   LL  +L YDP+ R++A  AL HPFF
Sbjct: 257 EDG---RSLLSQMLHYDPNKRISAKAALAHPFF 286

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (429), Expect = 5e-50
 Identities = 75/343 (21%), Positives = 129/343 (37%), Gaps = 81/343 (23%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKR 150
           N    ++I+ ++G+G FG+V    ++ET    A KV+    ++  E  M EID+L     
Sbjct: 9   NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD- 67

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                   V++ + F Y N++ I+ E       D +     RP     ++ + +Q L+ +
Sbjct: 68  ----HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 123

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            ++HD ++IH DLK  NILF     +K+ D+ V+A++                       
Sbjct: 124 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-------------------- 163

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGL-----GWSYPCDMWSVGCILIELCSGEALFQTHE 325
                Q  +  + T ++ APEV++        + Y  D+WS+G  LIE+   E       
Sbjct: 164 ----IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 219

Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
            +  L  + +   P                     L  P   +S                
Sbjct: 220 PMRVLLKIAKSEPP--------------------TLAQPSRWSSN--------------- 244

Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                        D L+  L  +  +R T    L+HPF T D 
Sbjct: 245 -----------FKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS 276

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  167 bits (425), Expect = 1e-49
 Identities = 73/350 (20%), Positives = 121/350 (34%), Gaps = 97/350 (27%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----------SIKKYREAAMTEIDVL 145
            Y+    +G G    V  C+ + T +  A+K++            +++ REA + E+D+L
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGR 204
             +  +       +Q+++ ++      +VF+ M    L+D+L +           R+I R
Sbjct: 64  RKVSGHPN----IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMR 117

Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
            LLE +  +H L ++H DLKPENIL      +K+                          
Sbjct: 118 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKL-------------------------- 151

Query: 265 VIDFGSTAY--EHQEHNYIVSTRHYRAPEVILG------LGWSYPCDMWSVGCILIELCS 316
             DFG +      ++   +  T  Y APE+I         G+    DMWS G I+  L +
Sbjct: 152 -TDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 210

Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
           G   F   + +  L M+                                           
Sbjct: 211 GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV------------------------ 246

Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                                 DL+   L   P  R TA +AL HPFF +
Sbjct: 247 ---------------------KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (429), Expect = 2e-49
 Identities = 81/340 (23%), Positives = 143/340 (42%), Gaps = 65/340 (19%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
            Y   + IG G+FG V      ++GE VAIK V   K+++     E+ ++  L       
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDH----- 72

Query: 156 SRCVQIRNWF------DYRNHICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLL 207
              V++R +F          ++ +V + +  ++Y   R      +  PV  V+    QL 
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             +A++H   + H D+KP+N+L                            P ++ +K+ D
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCD 166

Query: 268 FGSTAY--EHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTH 324
           FGS       + +   + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F   
Sbjct: 167 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
             ++ L  + +VLG   +  ++ ++    +F       +P+           +K      
Sbjct: 227 SGVDQLVEIIKVLGTPTREQIREMNPNYTEF------KFPQ-----------IKAHPWTK 269

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
           +        A   I L   LL Y P++RLT  +A  H FF
Sbjct: 270 VFRPRTPPEA---IALCSRLLEYTPTARLTPLEACAHSFF 306

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  166 bits (422), Expect = 6e-49
 Identities = 71/343 (20%), Positives = 122/343 (35%), Gaps = 81/343 (23%)

Query: 90  GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLEL 147
            E++   Y     +G G F +V+   D+ T + VAIK +   +++    +   EI VL  
Sbjct: 4   AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 63

Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +K         V + + ++   H+ ++ + + G  L+D + +     +       +  Q+
Sbjct: 64  IKH-----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQV 116

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           L+ V ++HDL ++H DLKPEN+L+ S                        L + S I + 
Sbjct: 117 LDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMIS 152

Query: 267 DFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
           DFG +  E           T  Y APEV+    +S   D WS+G I   L  G   F   
Sbjct: 153 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 212

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
            + +    + +            +   A                                
Sbjct: 213 NDAKLFEQILKAEYEFDSPYWDDISDSA-------------------------------- 240

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                         D ++ L+  DP  R T   AL+HP+   D
Sbjct: 241 -------------KDFIRHLMEKDPEKRFTCEQALQHPWIAGD 270

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (419), Expect = 1e-48
 Identities = 77/339 (22%), Positives = 138/339 (40%), Gaps = 64/339 (18%)

Query: 99  ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK------YREAAMTEIDVLELLKRYD 152
            L  +GEG F  V    D+ T + VAIK ++   +          A+ EI +L+ L    
Sbjct: 2   KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH-- 59

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                 + + + F ++++I +VF+ +   L   ++ N+    P   ++      L+ + +
Sbjct: 60  ---PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP-SHIKAYMLMTLQGLEY 115

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG--- 269
           +H   ++H DLKP N+L                           L ++  +K+ DFG   
Sbjct: 116 LHQHWILHRDLKPNNLL---------------------------LDENGVLKLADFGLAK 148

Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           S    ++ + + V TR YRAPE++ G   +    DMW+VGCIL EL           +L+
Sbjct: 149 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD 208

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
            L  +   LG   +                    WP+  +  + +          + +  
Sbjct: 209 QLTRIFETLGTPTEE------------------QWPDMCSLPDYVTFKSFPGIPLHHIFS 250

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
                    +DL+QGL  ++P +R+TA  ALK  +F+  
Sbjct: 251 AAGDDL---LDLIQGLFLFNPCARITATQALKMKYFSNR 286

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  165 bits (419), Expect = 2e-48
 Identities = 69/346 (19%), Positives = 112/346 (32%), Gaps = 90/346 (26%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLE 146
           ++    +  LR+IG G+FG V    D    E VAIK +        +  +  + E+  L+
Sbjct: 11  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70

Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
            L+         +Q R  +   +   +V E  LG +          +P     +  +   
Sbjct: 71  KLRH-----PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHG 123

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
            L+ +A++H   +IH D+K  NIL                           L +   +K+
Sbjct: 124 ALQGLAYLHSHNMIHRDVKAGNIL---------------------------LSEPGLVKL 156

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQ 322
            DFGS A      N  V T ++ APEVIL +    +    D+WS+G   IEL   +    
Sbjct: 157 GDFGS-ASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
               +  L                          +        G  S             
Sbjct: 216 NMNAMSAL----------------------YHIAQNESPALQSGHWSEY----------- 242

Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                           + +   L+  P  R T+   LKH F  R+ 
Sbjct: 243 --------------FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (420), Expect = 3e-48
 Identities = 82/345 (23%), Positives = 136/345 (39%), Gaps = 48/345 (13%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELL 148
            +  RY+ L+ IG G  G V    D      VAIK +      + + + A  E+ +++ +
Sbjct: 14  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73

Query: 149 KRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
              +          +   +    + +V E++  +L   ++         + +  +  Q+L
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQML 129

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             +  +H   +IH DLKP NI+  S   LKI D                           
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD-------------------------FG 164

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
              TA         V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + +
Sbjct: 165 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRR----GRLDWPEGATSRESIKAVLKLPRLQ 383
           +    +   LG      +K++      +V        L +P+           L    L 
Sbjct: 225 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK-----------LFPDSLF 273

Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
               +H    A    DLL  +L  DP+ R++  DAL+HP+    Y
Sbjct: 274 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 318

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (418), Expect = 6e-48
 Identities = 82/353 (23%), Positives = 152/353 (43%), Gaps = 56/353 (15%)

Query: 81  KDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKY 134
           + G Y   + +    + + Y+ L+ +G G +G V   +D  TG  VAIK +      + +
Sbjct: 1   RSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELF 60

Query: 135 REAAMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRP 193
            + A  E+ +L+ ++  +  G           D      +V   +G  L   ++      
Sbjct: 61  AKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH---EK 117

Query: 194 FPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY 253
              D ++ +  Q+L+ + ++H   +IH DLKP N+                         
Sbjct: 118 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLA------------------------ 153

Query: 254 YKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILI 312
              + +   +K++DFG       E    V TR YRAPEVIL  + ++   D+WSVGCI+ 
Sbjct: 154 ---VNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMA 210

Query: 313 ELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRES 372
           E+ +G+ LF+  ++L+ L  + +V G  P   ++R+     K   +G  +  +   +   
Sbjct: 211 EMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS-- 268

Query: 373 IKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                        ++ +    A   ++LL+ +L  D   R+TA +AL HP+F 
Sbjct: 269 -------------ILTNASPLA---VNLLEKMLVLDAEQRVTAGEALAHPYFE 305

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (411), Expect = 1e-47
 Identities = 63/337 (18%), Positives = 118/337 (35%), Gaps = 79/337 (23%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRYDR 153
            + +++ +GEG +G+V   ++R T E VA+K+V         E    EI + ++L     
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH--- 62

Query: 154 SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                V+        N   +  E   G  L+D +  +     P    +    QL+  V +
Sbjct: 63  --ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 118

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H + + H D+KPEN+L    + LKI          +D         ++           
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKI----------SDFGLATVFRYNN----------- 157

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
              +  N +  T  Y APE++    + + P D+WS G +L  + +GE  +    +     
Sbjct: 158 -RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE- 215

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
             +        +  K++D                                          
Sbjct: 216 YSDWKEKKTYLNPWKKIDSAP--------------------------------------- 236

Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
                 + LL  +L  +PS+R+T  D  K  ++ +  
Sbjct: 237 ------LALLHKILVENPSARITIPDIKKDRWYNKPL 267

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (416), Expect = 1e-47
 Identities = 79/342 (23%), Positives = 146/342 (42%), Gaps = 53/342 (15%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELL 148
            +  RY+ L  +G G +G V    D +TG  VA+K +        + +    E+ +L+ +
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74

Query: 149 KRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           K  +  G           +  N + +V  ++G  L + ++    +    D V+ +  Q+L
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQIL 131

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
             + ++H   +IH DLKP N+                                  +K++D
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCE---------------------------LKILD 164

Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHEN 326
           FG   +   E    V+TR YRAPE++L    ++   D+WSVGCI+ EL +G  LF   ++
Sbjct: 165 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
           ++ L ++ R++G     +LK++   + +   +     P+   +                V
Sbjct: 225 IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN---------------V 269

Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
               +  A   +DLL+ +L  D   R+TA  AL H +F + +
Sbjct: 270 FIGANPLA---VDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (411), Expect = 2e-47
 Identities = 69/338 (20%), Positives = 120/338 (35%), Gaps = 80/338 (23%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLK 149
            +   +Y    KIG+G  G V   +D  TG+ VAI+ +   +   +E  + EI V+   K
Sbjct: 16  GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                    V   + +   + + +V E + G SL D + +          +  + R+ L+
Sbjct: 76  -----NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQ 127

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + F+H  ++IH D+K +NIL      +K+ D+   A                       
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA----------------------- 164

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
                E  + + +V T ++ APEV+    +    D+WS+G + IE+  GE  +     L 
Sbjct: 165 -QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 223

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
            L ++     P                     L  PE  ++                   
Sbjct: 224 ALYLIATNGTP--------------------ELQNPEKLSAI------------------ 245

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
                     D L   L  D   R +A + L+H F   
Sbjct: 246 --------FRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  162 bits (410), Expect = 6e-47
 Identities = 72/334 (21%), Positives = 146/334 (43%), Gaps = 50/334 (14%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
            Y+++RK+G G + +V + ++    E V +K+++ +KK +     EI +LE L+      
Sbjct: 36  DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLRGGP--- 90

Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              + + +                 +  DF +   Y+      +R    ++L+ + + H 
Sbjct: 91  -NIITLADIVKDPVSRTPALVFEHVNNTDFKQL--YQTLTDYDIRFYMYEILKALDYCHS 147

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
           + ++H D+KP N++                             +   +++ID+G   + H
Sbjct: 148 MGIMHRDVKPHNVMIDH--------------------------EHRKLRLIDWGLAEFYH 181

Query: 276 --QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGE-ALFQTHENLEHLA 331
             QE+N  V++R+++ PE+++    + Y  DMWS+GC+L  +   +   F  H+N + L 
Sbjct: 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 241

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
            + +VLG           +    ++ +  ++            +  +  R  +   QH+ 
Sbjct: 242 RIAKVLGT----------EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV 291

Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                 +D L  LLRYD  SRLTA +A++HP+F 
Sbjct: 292 SPE--ALDFLDKLLRYDHQSRLTAREAMEHPYFY 323

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (406), Expect = 1e-46
 Identities = 75/344 (21%), Positives = 121/344 (35%), Gaps = 85/344 (24%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-------KYREAAMTEID 143
           EN+   Y    ++G G F  V  C ++ TG   A K ++  +         RE    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
           +L+ ++         + +   ++ +  + ++ E + G  L+DFL +        +   E 
Sbjct: 66  ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
            +Q+L  V ++H L++ H DLKPENI+ +     K                         
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK-----------------------PR 155

Query: 263 IKVIDFGSTAY--EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
           IK+IDFG         E   I  T  + APE++         DMWS+G I   L SG + 
Sbjct: 156 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
           F      E LA +  V               A                            
Sbjct: 216 FLGDTKQETLANVSAVNYEFEDEYFSNTSALA---------------------------- 247

Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                             D ++ LL  DP  R+T  D+L+HP+ 
Sbjct: 248 -----------------KDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  157 bits (397), Expect = 2e-45
 Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 61/336 (18%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYD 152
           +Y  L KIGEGT+G V    +   GET A+K +R  K         + EI +L+ LK   
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKH-- 59

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
              S  V++ +    +  + +VFE L   L   L             +    QLL  +A+
Sbjct: 60  ---SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAY 115

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            HD R++H DLKP+N+L                           + +   +K+ DFG   
Sbjct: 116 CHDRRVLHRDLKPQNLL---------------------------INREGELKIADFGLAR 148

Query: 273 Y---EHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLE 328
                 +++ + + T  YRAP+V++G   +S   D+WSVGCI  E+ +G  LF      +
Sbjct: 149 AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
            L  + R+LG         V +                   +      +  P      ++
Sbjct: 209 QLMRIFRILGTPNSKNWPNVTELP-----------------KYDPNFTVYEPLPWESFLK 251

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
            +D S    IDLL  +L+ DP+ R+TA  AL+H +F
Sbjct: 252 GLDESG---IDLLSKMLKLDPNQRITAKQALEHAYF 284

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 2e-45
 Identities = 66/349 (18%), Positives = 127/349 (36%), Gaps = 92/349 (26%)

Query: 88  ALGENLTSRY-KILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEID 143
           A+G +   R+ K   +IG G+F  V   LD ET   VA   ++     K  R+    E +
Sbjct: 1   AVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAE 60

Query: 144 VLELLKRYDRSGSRCVQIRNWF----DYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDL 198
           +L+ L+         V+  + +      +  I +V E M   +L  +L++   +   + +
Sbjct: 61  MLKGLQH-----PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKV 113

Query: 199 VREIGRQLLECVAFMHDL--RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
           +R   RQ+L+ + F+H     +IH DLK +NI    P                       
Sbjct: 114 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP----------------------- 150

Query: 257 LPKSSAIKVIDFG-STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
              + ++K+ D G +T         ++ T  + APE+     +    D+++ G  ++E+ 
Sbjct: 151 ---TGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMA 206

Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA 375
           + E  +   +N   +    RV   +      +V  P                        
Sbjct: 207 TSEYPYSECQNAAQI--YRRVTSGVKPASFDKVAIPE----------------------- 241

Query: 376 VLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                                + ++++G +R +   R +  D L H FF
Sbjct: 242 ---------------------VKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (386), Expect = 5e-44
 Identities = 65/338 (19%), Positives = 109/338 (32%), Gaps = 87/338 (25%)

Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL----ELL 148
           L S+Y++   +G G FG V   +       VAIK V   +      +     +     LL
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
           K+     S  +++ +WF+  +   ++ E   P    F           +L R    Q+LE
Sbjct: 62  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            V   H+  ++H D+K ENIL                                 +K+IDF
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDL--------------------------NRGELKLIDF 155

Query: 269 G-STAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHEN 326
           G     +   +     TR Y  PE I           +WS+G +L ++  G+  F+  E 
Sbjct: 156 GSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215

Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
                                        + RG++ + +  +S                 
Sbjct: 216 -----------------------------IIRGQVFFRQRVSSE---------------- 230

Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
                        L++  L   PS R T  +   HP+ 
Sbjct: 231 ----------CQHLIRWCLALRPSDRPTFEEIQNHPWM 258

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (383), Expect = 2e-43
 Identities = 91/335 (27%), Positives = 144/335 (42%), Gaps = 55/335 (16%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYD 152
           +Y+ L KIGEGT+G V    +RET E VA+K VR     +    +A+ EI +L+ LK  +
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                 V++ +       + +VFE     L  +    N    P ++V+    QLL+ + F
Sbjct: 63  -----IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGF 116

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
            H   ++H DLKP+N+L      LK+ ++ +       V  Y                  
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY------------------ 158

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEA-LFQTHENLEHL 330
                 +  V T  YR P+V+ G    S   DMWS GCI  EL +    LF  ++  + L
Sbjct: 159 ------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212

Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
             + R+LG   +     + K  +         +P    +   +  V KL           
Sbjct: 213 KRIFRLLGTPTEEQWPSMTKLPD------YKPYPMYPATTSLVNVVPKLNAT-------- 258

Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
                   DLLQ LL+ +P  R++A +AL+HP+F+
Sbjct: 259 ------GRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (380), Expect = 6e-43
 Identities = 61/337 (18%), Positives = 112/337 (33%), Gaps = 83/337 (24%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDV-LELLKRYDRS 154
            +K  + +GEG+F  V+   +  T    AIK++      +E  +  +    +++ R D  
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               V++   F     +           L  ++RK     F     R    +++  + ++
Sbjct: 69  F--FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYL 124

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
           H   +IH DLKPENIL     +++I D+                            S   
Sbjct: 125 HGKGIIHRDLKPENILLNEDMHIQITDFGTA----------------------KVLSPES 162

Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
           +    N  V T  Y +PE++         D+W++GCI+ +L +G   F+          +
Sbjct: 163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 222

Query: 334 ERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS 393
            ++    P+                    +P+                            
Sbjct: 223 IKLEYDFPEKF------------------FPK---------------------------- 236

Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDA------LKHPFF 424
                DL++ LL  D + RL   +         HPFF
Sbjct: 237 ---ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (373), Expect = 3e-42
 Identities = 59/343 (17%), Positives = 114/343 (33%), Gaps = 96/343 (27%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYDR 153
           Y++L  IG G++G+      +  G+ +  K +      +  ++  ++E+++L  LK    
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH--- 62

Query: 154 SGSRCVQIRNWFDYR--NHICIVFE-MLGPSLYDFLRKN--NYRPFPVDLVREIGRQLLE 208
                V+  +    R    + IV E   G  L   + K     +    + V  +  QL  
Sbjct: 63  --PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 120

Query: 209 CVAFMHDL-----RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
            +   H        ++H DLKP N+     + +K+                         
Sbjct: 121 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL------------------------- 155

Query: 264 KVIDFGSTAYEHQEHNY---IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
              DFG     + + ++    V T +Y +PE +  + ++   D+WS+GC+L ELC+    
Sbjct: 156 --GDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 213

Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
           F      E                           +R G+        S E         
Sbjct: 214 FTAFSQKELAGK-----------------------IREGKFRRIPYRYSDE--------- 241

Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
                           L +++  +L      R +  + L++P 
Sbjct: 242 ----------------LNEIITRMLNLKDYHRPSVEEILENPL 268

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (375), Expect = 5e-42
 Identities = 61/335 (18%), Positives = 113/335 (33%), Gaps = 85/335 (25%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLELLKRY 151
            + + + +G+G+FG+V     ++T +  AIK ++     +    E  M E  VL L   +
Sbjct: 3   DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
                    +   F  + ++  V E + G  L   ++      F +        +++  +
Sbjct: 63  P----FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGL 116

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
            F+H   +++ DLK +NIL     ++KI D+ +   +                       
Sbjct: 117 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-------------------- 156

Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
                 + N    T  Y APE++LG  +++  D WS G +L E+  G++ F   +  E  
Sbjct: 157 ----DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 212

Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
                                    +R     +P                          
Sbjct: 213 -----------------------HSIRMDNPFYPRWLEKE-------------------- 229

Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALK-HPFF 424
                   DLL  L   +P  RL     ++ HP F
Sbjct: 230 ------AKDLLVKLFVREPEKRLGVRGDIRQHPLF 258

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  146 bits (368), Expect = 3e-41
 Identities = 63/339 (18%), Positives = 115/339 (33%), Gaps = 64/339 (18%)

Query: 93  LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
           + +RY++ RKIG G+FG +    D   GE VAIK+   +K        E  + +++    
Sbjct: 5   VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC-VKTKHPQLHIESKIYKMM---- 59

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
           + G     IR      ++  +V E+LGPSL D     + R F +  V  +  Q++  + +
Sbjct: 60  QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEY 118

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H    IH D+KP+N L    +   +           D    K+   +            
Sbjct: 119 IHSKNFIHRDVKPDNFLMGLGKKGNLVYI-------IDFGLAKKYRDAR-------THQH 164

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
             ++E+  +  T  Y +    LG+  S   D+ S+G +L+    G   +Q  +       
Sbjct: 165 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 224

Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
            ER          K++  P E   +     +P                            
Sbjct: 225 YER-------ISEKKMSTPIEVLCK----GYPSE-------------------------- 247

Query: 393 SAGYLIDLLQGLLRYDPSSRLTA---HDALKHPFFTRDY 428
                   L          +          ++ F  + +
Sbjct: 248 ----FATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 282

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  144 bits (365), Expect = 7e-41
 Identities = 57/287 (19%), Positives = 102/287 (35%), Gaps = 22/287 (7%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
            YK+ R+IGEG+FG + +  +    + VAIK     +        E    +LL       
Sbjct: 6   HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR-RSDAPQLRDEYRTYKLLAGCTG-- 62

Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
                +  +     H  +V ++LGPSL D L     R F V  V    +Q+L  V  +H+
Sbjct: 63  --IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHE 119

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
             L++ D+KP+N L   P         V      D    K                   +
Sbjct: 120 KSLVYRDIKPDNFLIGRPNSKNANMIYVV-----DFGMVKFYRDPV-------TKQHIPY 167

Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
           +E   +  T  Y +    LG   S   D+ ++G + +    G   +Q  +   +    ER
Sbjct: 168 REKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER 227

Query: 336 VLG----PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
           +         + +     +   K++   R    +     + ++ +  
Sbjct: 228 IGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 274

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  146 bits (368), Expect = 1e-40
 Identities = 70/341 (20%), Positives = 128/341 (37%), Gaps = 89/341 (26%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLELLKRY 151
            + + R IG G FG+V  C   +TG+  A+K +      +K+    A+ E  +L L+   
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
           D      V +   F   + +  + + M G  L+  L ++    F    +R    +++  +
Sbjct: 65  DC--PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGL 120

Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
             MH+  +++ DLKP NIL                           L +   +++ D G 
Sbjct: 121 EHMHNRFVVYRDLKPANIL---------------------------LDEHGHVRISDLGL 153

Query: 270 STAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
           +  +  ++ +  V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+  +
Sbjct: 154 ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 213

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
              +    L                        + P+  +                    
Sbjct: 214 KHEIDRMTLTMAV--------------------ELPDSFSPE------------------ 235

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLT-----AHDALKHPFF 424
                   L  LL+GLL+ D + RL      A +  + PFF
Sbjct: 236 --------LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 268

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  139 bits (350), Expect = 2e-38
 Identities = 67/337 (19%), Positives = 112/337 (33%), Gaps = 91/337 (27%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLELLKRYD 152
           ++ILR +G G+FG+V     R  G   A+KV++       K  E    E  +L ++    
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH-- 63

Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
                 +++   F     I ++ + +      F      + FP  + +    ++   + +
Sbjct: 64  ---PFIIRMWGTFQDAQQIFMIMDYI-EGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 119

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +H   +I+ DLKPENIL                           L K+  IK+ DFG   
Sbjct: 120 LHSKDIIYRDLKPENIL---------------------------LDKNGHIKITDFGFAK 152

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
           Y       +  T  Y APEV+    ++   D WS G ++ E+ +G   F           
Sbjct: 153 YVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY---------- 202

Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
                        ++        +    L +P                            
Sbjct: 203 -----DSNTMKTYEK--------ILNAELRFPPFFNED---------------------- 227

Query: 393 SAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
               + DLL  L+  D S RL        D   HP+F
Sbjct: 228 ----VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 260

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (345), Expect = 3e-38
 Identities = 59/329 (17%), Positives = 109/329 (33%), Gaps = 84/329 (25%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
              K+L+ IG+G FG V   L    G  VA+K +++     +A + E  V+  L+     
Sbjct: 7   KELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRH---- 59

Query: 155 GSRCVQIRNWF-DYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
            S  VQ+     + +  + IV E M   SL D+LR         D + +    + E + +
Sbjct: 60  -SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 118

Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
           +     +H DL   N+L                           + + +  KV DFG T 
Sbjct: 119 LEGNNFVHRDLAARNVL---------------------------VSEDNVAKVSDFGLTK 151

Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
                 +       + APE +    +S   D+WS G +L E+ S   +      L+ +  
Sbjct: 152 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-- 209

Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
                                +  +  ++D P+G                          
Sbjct: 210 -------------------VPRVEKGYKMDAPDGCPPA---------------------- 228

Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKH 421
               + ++++     D + R +     + 
Sbjct: 229 ----VYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (347), Expect = 8e-38
 Identities = 62/338 (18%), Positives = 117/338 (34%), Gaps = 90/338 (26%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLELLKRYD 152
           +  L+ +G+GTFG+V+   ++ TG   A+K++R      K      +TE  VL+  +   
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                   ++  F   + +C V E   G  L+  L +     F  +  R  G +++  + 
Sbjct: 67  -----LTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALE 119

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H   +++ D+K EN++     ++KI D+ +     +D                     
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--------------------- 158

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
                       T  Y APEV+    +    D W +G ++ E+  G   F          
Sbjct: 159 ---GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY--------- 206

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
                     + + +         +    + +P   +                       
Sbjct: 207 ------NQDHERLFEL--------ILMEEIRFPRTLSPE--------------------- 231

Query: 392 HSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
                   LL GLL+ DP  RL      A + ++H FF
Sbjct: 232 -----AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  134 bits (338), Expect = 4e-37
 Identities = 51/276 (18%), Positives = 92/276 (33%), Gaps = 37/276 (13%)

Query: 92  NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREAAMTEIDVLEL 147
           +L+ RY++   +G G   +V    D      VA+KV+R        +      E      
Sbjct: 4   HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 63

Query: 148 LKRYDRSGSRCVQIRNWFDYRNH----ICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
           L          V + +  +          IV E + G +L D +      P       E+
Sbjct: 64  LNH-----PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEV 116

Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
                + + F H   +IH D+KP NI+  +   +K+ D+                     
Sbjct: 117 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF--------------------- 155

Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
                   +     +   ++ T  Y +PE   G       D++S+GC+L E+ +GE  F 
Sbjct: 156 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 215

Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
               +       R     P    + +    +  V +
Sbjct: 216 GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLK 251

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  134 bits (339), Expect = 1e-36
 Identities = 64/338 (18%), Positives = 118/338 (34%), Gaps = 91/338 (26%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
           ++  ++ +G G+FG+V+    +E+G   A+K++   K    K  E  + E  +L+ +   
Sbjct: 42  QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98

Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
                      ++ D  N   ++  + G  ++  LR+     F     R    Q++    
Sbjct: 99  -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFE 155

Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
           ++H L LI+ DLKPEN+L                           + +   I+V DFG  
Sbjct: 156 YLHSLDLIYRDLKPENLL---------------------------IDQQGYIQVTDFGFA 188

Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
                    +  T    APE+IL  G++   D W++G ++ E+ +G   F   + ++   
Sbjct: 189 KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE 248

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
            +       P H                     +                          
Sbjct: 249 KIVSGKVRFPSHF------------------SSD-------------------------- 264

Query: 392 HSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
                L DLL+ LL+ D + R        +D   H +F
Sbjct: 265 -----LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (323), Expect = 8e-35
 Identities = 59/302 (19%), Positives = 109/302 (36%), Gaps = 50/302 (16%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRY 151
            +  + ++IG G+FG V      +    VA+K++       +  +A   E+ VL      
Sbjct: 8   GQITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT--- 61

Query: 152 DRSGSRCVQIRNWFDY--RNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                R V I  +  Y     + IV +   G SLY  L       F +  + +I RQ  +
Sbjct: 62  -----RHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQ 115

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++H   +IH DLK  NI       +KI D+ +          ++             
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF------------ 163

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHE 325
                       +  +  + APEVI       +S+  D+++ G +L EL +G+  +    
Sbjct: 164 ----------EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213

Query: 326 NLEHLAMM--ERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
           N + +  M     L P    +     K  ++ +        +    R     +L    ++
Sbjct: 214 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC---LKKKRDERPLFPQILA--SIE 268

Query: 384 NL 385
            L
Sbjct: 269 LL 270

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 8e-34
 Identities = 59/334 (17%), Positives = 109/334 (32%), Gaps = 80/334 (23%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
              K++ ++G G FG+V           VA+K ++      +A + E ++++ L+     
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH---- 67

Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
             R V++      +  I I+ E M   SL DFL+  +     ++ + ++  Q+ E +AF+
Sbjct: 68  -QRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
            +   IH DL+  NIL       KI D+ +      +                       
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN----------------------- 162

Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
           E+           + APE I    ++   D+WS G +L E+ +   +         +   
Sbjct: 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV--- 219

Query: 334 ERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHS 393
                              +   R  R+  P+                            
Sbjct: 220 ------------------IQNLERGYRMVRPDNCPEE----------------------- 238

Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALK--HPFFT 425
              L  L++   +  P  R T          FFT
Sbjct: 239 ---LYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (313), Expect = 2e-33
 Identities = 59/333 (17%), Positives = 107/333 (32%), Gaps = 78/333 (23%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
              ++  K+G+G FG+V       T   VAIK ++      EA + E  V++ L+     
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHE--- 72

Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + VQ+           +   M   SL DFL+    +   +  + ++  Q+   +A++ 
Sbjct: 73  --KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 130

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
            +  +H DL+  NIL       K+           D    + +  +             E
Sbjct: 131 RMNYVHRDLRAANILVGENLVCKV----------ADFGLARLIEDN-------------E 167

Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
           +           + APE  L   ++   D+WS G +L EL +   +              
Sbjct: 168 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-------- 219

Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA 394
                  + +L +V++         R+  P                              
Sbjct: 220 ------NREVLDQVERGY-------RMPCPPECPES------------------------ 242

Query: 395 GYLIDLLQGLLRYDPSSRLTAHDALK--HPFFT 425
             L DL+    R +P  R T          +FT
Sbjct: 243 --LHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 273

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (301), Expect = 7e-32
 Identities = 54/327 (16%), Positives = 102/327 (31%), Gaps = 76/327 (23%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           S    +++IG G FG V         + VAIK +R      E  + E +V+  L      
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH---- 59

Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
             + VQ+      +  IC+VFE +         +     F  + +  +   + E +A++ 
Sbjct: 60  -PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
           +  +IH DL   N L    + +K+ D+ +T     D                       +
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-----------------------Q 155

Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
           +           + +PEV     +S   D+WS G ++ E+ S   +   + +   +    
Sbjct: 156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV---- 211

Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA 394
                             E      RL  P  A++                         
Sbjct: 212 -----------------VEDISTGFRLYKPRLASTH------------------------ 230

Query: 395 GYLIDLLQGLLRYDPSSRLTAHDALKH 421
             +  ++    +  P  R      L+ 
Sbjct: 231 --VYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  120 bits (302), Expect = 8e-32
 Identities = 50/297 (16%), Positives = 110/297 (37%), Gaps = 31/297 (10%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
           +   +  K+G G +G+V + + ++   TVA+K ++      E  + E  V++ +K     
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH---- 72

Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
               VQ+           I+ E M   +L D+LR+ N +     ++  +  Q+   + ++
Sbjct: 73  -PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 131

Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
                IH DL   N L      +K+ D+ ++     D                       
Sbjct: 132 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----------------------- 168

Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL--A 331
            +  H        + APE +    +S   D+W+ G +L E+ +         +L  +   
Sbjct: 169 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 228

Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
           + +      P+   ++V +      +    D P  A   ++ + + +   + + V +
Sbjct: 229 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK 285

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 7e-31
 Identities = 59/341 (17%), Positives = 111/341 (32%), Gaps = 70/341 (20%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
              +   IG+G FG+V     +  GE VA+K+  S ++       EI    +L+      
Sbjct: 4   TIVLQESIGKGRFGEV--WRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRH----- 56

Query: 156 SRCVQIRNWFDYRN----HICIVFE-MLGPSLYDFLRKNNYRP-----FPVDLVREIGRQ 205
              +      +  N     + +V +     SL+D+L +            +     +   
Sbjct: 57  ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL 116

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
            +E V       + H DLK +NIL        I D  +  R  +  +     P       
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH----- 171

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILG------LGWSYPCDMWSVGCILIELCSGEA 319
                           V T+ Y APEV+               D++++G +  E+    +
Sbjct: 172 ---------------RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 216

Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
           +   HE+ +          P  + M K V +       + R + P    S E+++     
Sbjct: 217 IGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRV---- 266

Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
                            +  +++     + ++RLTA    K
Sbjct: 267 -----------------MAKIMRECWYANGAARLTALRIKK 290

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 1e-30
 Identities = 67/345 (19%), Positives = 123/345 (35%), Gaps = 90/345 (26%)

Query: 96  RYKILRKIGEGTFGQV---LDCLDRETGETVAIKVVRSIK-----KYREAAMTEIDVLEL 147
            +++L+ +G G +G+V         +TG+  A+KV++        K  E   TE  VLE 
Sbjct: 25  NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84

Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
           +++        V +   F     + ++ + + G  L+  L +     F    V+    ++
Sbjct: 85  IRQSPF----LVTLHYAFQTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEI 138

Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
           +  +  +H L +I+ D+K ENIL  S  ++ + D+                        +
Sbjct: 139 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG-----------------------L 175

Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILIELCSGEALFQTH 324
                A E +       T  Y AP+++ G   G     D WS+G ++ EL +G + F   
Sbjct: 176 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 235

Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
                 A + R                    + +    +P+  ++               
Sbjct: 236 GEKNSQAEISRR-------------------ILKSEPPYPQEMSAL-------------- 262

Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRL-----TAHDALKHPFF 424
                         DL+Q LL  DP  RL      A +  +H FF
Sbjct: 263 ------------AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 295

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (293), Expect = 1e-30
 Identities = 58/333 (17%), Positives = 118/333 (35%), Gaps = 85/333 (25%)

Query: 101 RKIGEGTFGQVLDCLDR--ETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYDRSG 155
           +++G G FG V     +  +  +TVA+K+++   +    ++  + E +V++ L       
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN----- 67

Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
              V++    +  + + ++       L  +L++N  R      + E+  Q+   + ++ +
Sbjct: 68  PYIVRMIGICEAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEE 125

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
              +H DL   N+L V+  Y KI D+ ++     D NYYK                    
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA------------------- 166

Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHLAMME 334
               +      + APE I    +S   D+WS G ++ E    G+  ++  +  E  AM+E
Sbjct: 167 --QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224

Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA 394
           +                        R+  P G                            
Sbjct: 225 KGE----------------------RMGCPAGCPRE------------------------ 238

Query: 395 GYLIDLLQGLLRYDPSSRLTAHD---ALKHPFF 424
             + DL+     YD  +R         L++ ++
Sbjct: 239 --MYDLMNLCWTYDVENRPGFAAVELRLRNYYY 269

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 1e-30
 Identities = 58/346 (16%), Positives = 97/346 (28%), Gaps = 95/346 (27%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGE--TVAIKVVRSI--KKYREAAMTEIDVLELLKR 150
           +  K    IGEG FGQVL    ++ G     AIK ++    K        E++VL  L  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNY--------------RPFP 195
           +       + +    ++R ++ +  E     +L DFLRK+                    
Sbjct: 70  HPN----IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 125

Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
              +      +   + ++   + IH DL   NIL       KI D+              
Sbjct: 126 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF-------------- 171

Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
                              + +         + A E +    ++   D+WS G +L E+ 
Sbjct: 172 -----------GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 220

Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA 375
           S             L                      EK  +  RL+ P           
Sbjct: 221 SLGGTPYCGMTCAEL---------------------YEKLPQGYRLEKPLNCDDE----- 254

Query: 376 VLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH 421
                                + DL++   R  P  R +    L  
Sbjct: 255 ---------------------VYDLMRQCWREKPYERPSFAQILVS 279

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 5e-30
 Identities = 56/309 (18%), Positives = 104/309 (33%), Gaps = 54/309 (17%)

Query: 95  SRYKILRKIGEGTFGQV-----LDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLEL 147
           +R    + +G G FG+V        +  +   TVA+K+++  +    REA M+E+ VL  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRK----------------NN 190
           L  +       V +           ++ E      L +FLR+                ++
Sbjct: 83  LGNHMN----IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138

Query: 191 YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
                ++ +     Q+ + +AF+     IH DL   NIL       KI D+ +      D
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198

Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
            NY  +                              + APE I    +++  D+WS G  
Sbjct: 199 SNYVVK----------------------GNARLPVKWMAPESIFNCVYTFESDVWSYGIF 236

Query: 311 LIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSR 370
           L EL S  +       ++     + +         +         ++     W      R
Sbjct: 237 LWELFSLGSSPYPGMPVDSK-FYKMIKEGFRMLSPEHAPAEMYDIMKTC---WDADPLKR 292

Query: 371 ESIKAVLKL 379
            + K +++L
Sbjct: 293 PTFKQIVQL 301

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  115 bits (288), Expect = 1e-29
 Identities = 52/265 (19%), Positives = 100/265 (37%), Gaps = 31/265 (11%)

Query: 91  ENLTSRYKILRKIGEGTFGQVLDCLDRETGET---VAIKVVRS--IKKYREAAMTEIDVL 145
           E   S  KI + IG G FG+V     +  G+    VAIK ++S   +K R   ++E  ++
Sbjct: 22  EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 81

Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
                        + +         + I+ E +     D   + N   F V  +  + R 
Sbjct: 82  GQFDH-----PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRG 136

Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
           +   + ++ D+  +H DL   NIL  S    K+ D+ ++                   + 
Sbjct: 137 IAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS-------------------RF 177

Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH 324
           ++  ++   +           + APE I    ++   D+WS G ++ E+ S GE  +   
Sbjct: 178 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 237

Query: 325 ENLEHLAMMERVLG-PIPQHMLKRV 348
            N + +  +E+    P P      +
Sbjct: 238 TNQDVINAIEQDYRLPPPMDCPSAL 262

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 2e-29
 Identities = 55/358 (15%), Positives = 111/358 (31%), Gaps = 105/358 (29%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGET-----VAIKVVR--SIKKYREAAMTEIDVLEL 147
              +  + +G G FG+V++       +T     VA+K+++  +    REA M+E+ ++  
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYR-------------- 192
           L  ++      V +         I ++FE      L ++LR    +              
Sbjct: 97  LGSHEN----IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 152

Query: 193 -------PFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA 245
                      + +     Q+ + + F+     +H DL   N+L    + +KI D+ +  
Sbjct: 153 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR 212

Query: 246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMW 305
              +D NY                                 + APE +    ++   D+W
Sbjct: 213 DIMSDSNYVV----------------------RGNARLPVKWMAPESLFEGIYTIKSDVW 250

Query: 306 SVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRG-RLDW 363
           S G +L E+ S G   +       +                        K ++ G ++D 
Sbjct: 251 SYGILLWEIFSLGVNPYPGIPVDANF----------------------YKLIQNGFKMDQ 288

Query: 364 PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH 421
           P  AT                            +  ++Q    +D   R +  +    
Sbjct: 289 PFYATEE--------------------------IYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 5e-29
 Identities = 52/326 (15%), Positives = 102/326 (31%), Gaps = 78/326 (23%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
              L+++G G FG V     R     VAIK+++      +  + E  V+  L        
Sbjct: 6   LTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH-----E 59

Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
           + VQ+      +  I I+ E +         +     F    + E+ + + E + ++   
Sbjct: 60  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119

Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
           + +H DL   N L      +K+ D+ + +R   D  Y   +                   
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGL-SRYVLDDEYTSSVG------------------ 160

Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
                     +  PEV++   +S   D+W+ G ++ E+ S G+  ++   N E    + +
Sbjct: 161 ----SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 216

Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG 395
            L                      RL  P  A+ +                         
Sbjct: 217 GL----------------------RLYRPHLASEK------------------------- 229

Query: 396 YLIDLLQGLLRYDPSSRLTAHDALKH 421
            +  ++          R T    L +
Sbjct: 230 -VYTIMYSCWHEKADERPTFKILLSN 254

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  113 bits (282), Expect = 7e-29
 Identities = 58/325 (17%), Positives = 109/325 (33%), Gaps = 64/325 (19%)

Query: 91  ENLTSRYKILRKIGEGTFGQV-----LDCLDRETGETVAIKVVR--SIKKYREAAMTEID 143
           E   +  + +R IGEG FG+V        L  E    VA+K+++  +    +     E  
Sbjct: 9   EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 68

Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYR---------- 192
           ++             V++         +C++FE M    L +FLR  +            
Sbjct: 69  LMAEFD-----NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123

Query: 193 ------------PFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD 240
                       P        I RQ+   +A++ + + +H DL   N L      +KI D
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIAD 183

Query: 241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSY 300
           + + +R+    +YYK                               +  PE I    ++ 
Sbjct: 184 FGL-SRNIYSADYYKA---------------------DGNDAIPIRWMPPESIFYNRYTT 221

Query: 301 PCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
             D+W+ G +L E+ S       +  + H  ++  V         +         +R   
Sbjct: 222 ESDVWAYGVVLWEIFSYGLQP--YYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLC- 278

Query: 361 LDWPEGATSRESIKAVLKLPRLQNL 385
             W +    R S  ++ ++  LQ +
Sbjct: 279 --WSKLPADRPSFCSIHRI--LQRM 299

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (279), Expect = 1e-28
 Identities = 46/294 (15%), Positives = 100/294 (34%), Gaps = 34/294 (11%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGE----TVAIKVVR--SIKKYREAAMTEIDVLELL 148
           S     + IG G FG+V   + + +       VAIK ++    +K R   + E  ++   
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                     +++         + I+ E +     D   +     F V  +  + R +  
Sbjct: 67  SH-----HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA 121

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++ ++  +H DL   NIL  S    K+ D+ ++     D                  
Sbjct: 122 GMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT----------- 170

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
                     +       + APE I    ++   D+WS G ++ E+ +         +  
Sbjct: 171 ----------SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH 220

Query: 329 HL--AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
            +  A+ +    P P      + +   +  ++ R   P+ A     +  +++ P
Sbjct: 221 EVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 274

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 2e-27
 Identities = 60/334 (17%), Positives = 108/334 (32%), Gaps = 85/334 (25%)

Query: 101 RKIGEGTFGQVLDCLDRETGE--TVAIKVVR--SIKKYREAAMTEIDVLELLKRYDRSGS 156
            ++G G FG V   + R   +   VAIKV++  + K   E  M E  ++  L        
Sbjct: 15  IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN-----P 69

Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
             V++         + +V E   G  L+ FL        PV  V E+  Q+   + ++ +
Sbjct: 70  YIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEE 127

Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
              +H DL   N+L V+  Y KI D+ ++                        G+    +
Sbjct: 128 KNFVHRDLAARNVLLVNRHYAKISDFGLSK---------------------ALGADDSYY 166

Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHLAMME 334
              +       + APE I    +S   D+WS G  + E L  G+  ++  +  E +A +E
Sbjct: 167 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 226

Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA 394
           +                        R++ P                              
Sbjct: 227 QGK----------------------RMECPPECPPE------------------------ 240

Query: 395 GYLIDLLQGLLRYDPSSRLTAHD---ALKHPFFT 425
             L  L+     Y    R         ++  +++
Sbjct: 241 --LYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 4e-27
 Identities = 55/333 (16%), Positives = 100/333 (30%), Gaps = 85/333 (25%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA--------MTEIDVLELL 148
           +K ++ +G G FG V   L    GE V I V   IK+ REA         + E  V+  +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA--IKELREATSPKANKEILDEAYVMASV 68

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                      ++           I   M    L D++R++         +     Q+ +
Sbjct: 69  DNP-----HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAK 122

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++ D RL+H DL   N+L  +P+++KI D+ +      +   Y              
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------------ 170

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
                             + A E IL   +++  D+WS G  + EL +  +         
Sbjct: 171 ----------EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 220

Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
            +                     +    +  RL  P   T                    
Sbjct: 221 EI---------------------SSILEKGERLPQPPICTID------------------ 241

Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH 421
                   +  ++      D  SR    + +  
Sbjct: 242 --------VYMIMVKCWMIDADSRPKFRELIIE 266

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 6e-27
 Identities = 53/352 (15%), Positives = 111/352 (31%), Gaps = 96/352 (27%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVR--SIKKYREAAMTEIDVLEL 147
            +  + R++G+G+FG V + + +     E    VAIK V   +  + R   + E  V++ 
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYR--------PFPVDL 198
                      V++           ++ E M    L  +LR             P  +  
Sbjct: 80  FN-----CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 134

Query: 199 VREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
           + ++  ++ + +A+++  + +H DL   N +      +KI D+ +T        Y K   
Sbjct: 135 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--- 191

Query: 259 KSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
                                  +    + +PE +    ++   D+WS G +L E+ +  
Sbjct: 192 -------------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 232

Query: 319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
                  + E +                         +  G LD P+             
Sbjct: 233 EQPYQGLSNEQV---------------------LRFVMEGGLLDKPDNCPDM-------- 263

Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK------HPFF 424
                             L +L++   +Y+P  R +  + +        P F
Sbjct: 264 ------------------LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 297

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 9e-27
 Identities = 54/332 (16%), Positives = 92/332 (27%), Gaps = 81/332 (24%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGET---VAIKVVRSI--KKYREAAMTEIDVLELLK 149
            R ++ R IGEG FG V   +          VAIK  ++      RE  + E   +    
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
                    V++       N + I+ E+          +       +  +     QL   
Sbjct: 67  H-----PHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120

Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
           +A++   R +H D+   N+L  S + +K+ D+ + +R   D  YYK              
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL-SRYMEDSTYYK-------------- 165

Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
                    +       + APE I    ++   D+W  G  + E+               
Sbjct: 166 --------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217

Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
           +                       +     RL  P                         
Sbjct: 218 V---------------------IGRIENGERLPMPPNCPPT------------------- 237

Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH 421
                  L  L+     YDPS R    +    
Sbjct: 238 -------LYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 2e-26
 Identities = 46/271 (16%), Positives = 100/271 (36%), Gaps = 37/271 (13%)

Query: 96  RYKILRKIGEGTFGQVLDCLDRET---GETVAIKVVR----SIKKYREAAMTEIDVLELL 148
             ++L K+G+G+FG V             +VA+K ++    S  +  +  + E++ +  L
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68

Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
                     +++           +       SL D LRK+    F +  +     Q+ E
Sbjct: 69  DH-----RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAE 122

Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
            + ++   R IH DL   N+L  + + +KI D+ +    P + ++Y              
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM------------ 170

Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL 327
                      +      + APE +    +S+  D W  G  L E+ + G+  +      
Sbjct: 171 ---------QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221

Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
           + L  +++    +P+   +   +     + +
Sbjct: 222 QILHKIDKEGERLPRP--EDCPQDIYNVMVQ 250

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 5e-26
 Identities = 46/351 (13%), Positives = 108/351 (30%), Gaps = 97/351 (27%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDRETGE-------TVAIKVVR--SIKKYREAAMTEIDVL 145
            R  + + +GEG FGQV+        +        VA+K+++  + +K     ++E++++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLR--------------KNN 190
           +++ ++       + +         + ++ E     +L ++L+               N 
Sbjct: 73  KMIGKHKN----IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 128

Query: 191 YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
                   +     Q+   + ++   + IH DL   N+L      +KI            
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI------------ 176

Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
                     +   +         +++         + APE +    +++  D+WS G +
Sbjct: 177 ----------ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 226

Query: 311 LIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSR 370
           L E+ +          +E L                      +      R+D P   T+ 
Sbjct: 227 LWEIFTLGGSPYPGVPVEEL---------------------FKLLKEGHRMDKPSNCTNE 265

Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH 421
                                     L  +++      PS R T    ++ 
Sbjct: 266 --------------------------LYMMMRDCWHAVPSQRPTFKQLVED 290

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 4e-25
 Identities = 44/327 (13%), Positives = 86/327 (26%), Gaps = 78/327 (23%)

Query: 101 RKIGEGTFGQV---LDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSG 155
             IG G FG V       +       A+K +  I         +TE  +++         
Sbjct: 33  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH----- 87

Query: 156 SRCVQIRN-WFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
              + +            +V   +         +N      V  +   G Q+ + + F+ 
Sbjct: 88  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 147

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
             + +H DL   N +      +K+ D+ + AR   D  +     K+              
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEFDSVHNKTG------------- 193

Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
                       + A E +    ++   D+WS G +L EL +  A      N   +    
Sbjct: 194 ------AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI---- 243

Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA 394
                                ++  RL  PE                             
Sbjct: 244 -----------------TVYLLQGRRLLQPEYCPDP------------------------ 262

Query: 395 GYLIDLLQGLLRYDPSSRLTAHDALKH 421
             L +++          R +  + +  
Sbjct: 263 --LYEVMLKCWHPKAEMRPSFSELVSR 287

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 2e-24
 Identities = 57/349 (16%), Positives = 110/349 (31%), Gaps = 93/349 (26%)

Query: 95  SRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVR--SIKKYREAAMTEIDVLEL 147
            R K+ + +G G FGQV++          T  TVA+K+++  +      A M+E+   ++
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL---KI 69

Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNY--------------R 192
           L       +    +         + ++ E     +L  +LR                   
Sbjct: 70  LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 129

Query: 193 PFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
              ++ +     Q+ + + F+   + IH DL   NIL      +KI D+ +      D +
Sbjct: 130 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 189

Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
           Y ++                              + APE I    ++   D+WS G +L 
Sbjct: 190 YVRK----------------------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 227

Query: 313 ELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRES 372
           E+ S  A                    I +   +R+ +         R+  P+  T    
Sbjct: 228 EIFSLGASPYPGVK-------------IDEEFCRRLKEGT-------RMRAPDYTTPE-- 265

Query: 373 IKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH 421
                                   +   +      +PS R T  + ++H
Sbjct: 266 ------------------------MYQTMLDCWHGEPSQRPTFSELVEH 290

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 71.7 bits (175), Expect = 3e-15
 Identities = 31/226 (13%), Positives = 58/226 (25%), Gaps = 45/226 (19%)

Query: 97  YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL--ELLKRYDRS 154
             I + +GEG    V +C   E      +K  +      +    + D           RS
Sbjct: 2   DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60

Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
                +            +        L + +         V+   E+   +LE VA  +
Sbjct: 61  ARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY 120

Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS---- 270
              ++H DL   N+L                                 I +IDF      
Sbjct: 121 HRGIVHGDLSQYNVLVSEEG----------------------------IWIIDFPQSVEV 152

Query: 271 ---TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE 313
                 E  E +      ++          +    D+ S    +++
Sbjct: 153 GEEGWREILERDVRNIITYFSRT-------YRTEKDINSAIDRILQ 191

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} Length = 395

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.7 bits (84), Expect = 0.004
 Identities = 18/122 (14%), Positives = 31/122 (25%), Gaps = 5/122 (4%)

Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
           +  +      C  ++ W                     +   N      DL RE+     
Sbjct: 154 VPIWKEPDYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCL----DLARELEFLRA 209

Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT-ARSPTDVNYYKRLPKSSAIKVI 266
                   +   H DL+  NIL        I    ++        +     P    + +I
Sbjct: 210 HISLSKSPVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLI 269

Query: 267 DF 268
           DF
Sbjct: 270 DF 271

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	432
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.93
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.33
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.92
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.67
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.31
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.13
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.5

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-62  Score=448.60  Aligned_cols=250  Identities=25%  Similarity=0.439  Sum_probs=214.9

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++++.||+|+||+||+|+++.+++.||||++.+..    .....+.+|+.+++.++|     |||+++++++.+++.
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~h-----pnIv~~~~~~~~~~~   80 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-----PNILRLYGYFHDATR   80 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC-----TTBCCEEEEEECSSE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCC-----CCCCeEEEEEEECCE
Confidence            57999999999999999999999999999999997432    234567889999998877     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||| +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.                 
T Consensus        81 ~~ivmEy~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~-----------------  141 (263)
T d2j4za1          81 VYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS-----------------  141 (263)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-----------------
T ss_pred             EEEEEeecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecC-----------------
Confidence            99999999 899999998765  6999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                                ++.+||+|||+|...... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+
T Consensus       142 ----------~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~  211 (263)
T d2j4za1         142 ----------AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE  211 (263)
T ss_dssp             ----------TSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             ----------CCCEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHH
Confidence                      456777777777654332 344689999999999999999999999999999999999999999877766


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .+..+.+....+|                                                 +.+++++.+||.+||+.|
T Consensus       212 ~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~L~~d  242 (263)
T d2j4za1         212 TYKRISRVEFTFP-------------------------------------------------DFVTEGARDLISRLLKHN  242 (263)
T ss_dssp             HHHHHHTTCCCCC-------------------------------------------------TTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHcCCCCCC-------------------------------------------------ccCCHHHHHHHHHHccCC
Confidence            6655533222111                                                 245667899999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~  427 (432)
                      |++|||++|+|+||||+++
T Consensus       243 p~~R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         243 PSQRPMLREVLEHPWITAN  261 (263)
T ss_dssp             GGGSCCHHHHHTCHHHHHH
T ss_pred             HhHCcCHHHHHcCcCcCCc
Confidence            9999999999999999753

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.3e-62  Score=454.58  Aligned_cols=264  Identities=27%  Similarity=0.448  Sum_probs=211.4

Q ss_pred             cCceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           89 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        89 ~~~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ..+++.++|++.+.||+|+||+||+|+++.+++.||||++....  .....+.+|+.++..++|     |||+++++++.
T Consensus         3 ~~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~H-----pnIv~l~~~~~   77 (307)
T d1a06a_           3 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKH-----PNIVALDDIYE   77 (307)
T ss_dssp             ECSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCC-----TTBCCEEEEEE
T ss_pred             CCCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCC-----CCCCcEEEEEE
Confidence            35677889999999999999999999999999999999997432  334567889999998876     99999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      +++.+|+||||| |++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||+..             
T Consensus        78 ~~~~~~lvmE~~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~-------------  142 (307)
T d1a06a_          78 SGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS-------------  142 (307)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESS-------------
T ss_pred             ECCEEEEEEeccCCCcHHHhhhccc--CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecc-------------
Confidence            999999999999 899999998754  6999999999999999999999999999999999999854             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                 .+.++.+||+|||+|+.....  ....+||+.|+|||++.+..|+.++|||||||++|||++|..||.+
T Consensus       143 -----------~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~  211 (307)
T d1a06a_         143 -----------LDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD  211 (307)
T ss_dssp             -----------SSTTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             -----------cCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCC
Confidence                       345678899999988765433  3456899999999999999999999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+..+....+.+....++.                                             ...+.+++++.+||.+
T Consensus       212 ~~~~~~~~~i~~~~~~~~~---------------------------------------------~~~~~~s~~~~~li~~  246 (307)
T d1a06a_         212 ENDAKLFEQILKAEYEFDS---------------------------------------------PYWDDISDSAKDFIRH  246 (307)
T ss_dssp             SSHHHHHHHHHTTCCCCCT---------------------------------------------TTTTTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHhccCCCCCC---------------------------------------------ccccCCCHHHHHHHHH
Confidence            8777666555443222211                                             1123567779999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||+.||++|||++|+|+||||+++.
T Consensus       247 ~L~~dP~~R~s~~eil~hp~~~~~~  271 (307)
T d1a06a_         247 LMEKDPEKRFTCEQALQHPWIAGDT  271 (307)
T ss_dssp             HSCSSGGGSCCHHHHHHSTTTTSSC
T ss_pred             HccCCHhHCcCHHHHhcCHhhCCCC
Confidence            9999999999999999999998643

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-62  Score=448.14  Aligned_cols=255  Identities=24%  Similarity=0.383  Sum_probs=208.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++...  ...+.+.+|+.+++.++|     |||+++++++.+++.+
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~H-----pnIv~~~~~~~~~~~~   78 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH-----ENVVKFYGHRREGNIQ   78 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCC-----TTBCCEEEEEEETTEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCC-----CCEeeEeeeeccCcee
Confidence            467999999999999999999999999999999986432  334578899999999877     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||| +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.                  
T Consensus        79 ~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~------------------  138 (271)
T d1nvra_          79 YLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE------------------  138 (271)
T ss_dssp             EEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT------------------
T ss_pred             EEEEeccCCCcHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECC------------------
Confidence            9999999 899999997654  6999999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                               ++.+||+|||+|+....     .....+||+.|+|||++.+..+ +.++|||||||++|||++|++||...
T Consensus       139 ---------~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~  209 (271)
T d1nvra_         139 ---------RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP  209 (271)
T ss_dssp             ---------TCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred             ---------CCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCC
Confidence                     45677777777765322     2344689999999999998876 57899999999999999999999765


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +...............                                              ......+++++.+||.+|
T Consensus       210 ~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~s~~~~~li~~~  243 (271)
T d1nvra_         210 SDSCQEYSDWKEKKTY----------------------------------------------LNPWKKIDSAPLALLHKI  243 (271)
T ss_dssp             STTSHHHHHHHTTCTT----------------------------------------------STTGGGSCHHHHHHHHHH
T ss_pred             ChHHHHHHHHhcCCCC----------------------------------------------CCccccCCHHHHHHHHHH
Confidence            5432222111111000                                              011234677789999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCc
Q 047395          405 LRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      |+.||++|||++|+|+||||++..
T Consensus       244 L~~dP~~R~t~~eil~hpwf~~~l  267 (271)
T d1nvra_         244 LVENPSARITIPDIKKDRWYNKPL  267 (271)
T ss_dssp             SCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             cCCChhHCcCHHHHhcCHhhCcCC
Confidence            999999999999999999998653

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-61  Score=447.23  Aligned_cols=252  Identities=27%  Similarity=0.435  Sum_probs=215.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .++|+++++||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+.+++.++|     |||+++++++.+.+.+|
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~~~~~~~~~~~~~   93 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN-----PNIVNYLDSYLVGDELW   93 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCC-----TTBCCEEEEEEETTEEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCC-----CCEeeEeEEEEECCEEE
Confidence            468999999999999999999999999999999997433 345678899999999877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||| ||+|.+++.+.   .+++..++.++.||+.||+|||++||+||||||+|||++.                   
T Consensus        94 ivmEy~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~-------------------  151 (293)
T d1yhwa1          94 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM-------------------  151 (293)
T ss_dssp             EEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-------------------
T ss_pred             EEEEecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECC-------------------
Confidence            999999 99999988765   4999999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              ++.+||+|||+|+....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       152 --------~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~  223 (293)
T d1yhwa1         152 --------DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR  223 (293)
T ss_dssp             --------TCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             --------CCcEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH
Confidence                    45677777887765432   2344679999999999999999999999999999999999999999877766


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .+..+.....+..                                              ..+..+++.+++||.+||+.|
T Consensus       224 ~~~~~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~~d  257 (293)
T d1yhwa1         224 ALYLIATNGTPEL----------------------------------------------QNPEKLSAIFRDFLNRCLDMD  257 (293)
T ss_dssp             HHHHHHHHCSCCC----------------------------------------------SSGGGSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHhCCCCCC----------------------------------------------CCcccCCHHHHHHHHHHccCC
Confidence            6555433221110                                              112346777999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~  426 (432)
                      |++|||++|+|+||||+.
T Consensus       258 P~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         258 VEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             TTTSCCHHHHTTCGGGGG
T ss_pred             hhHCcCHHHHhcCHhhCC
Confidence            999999999999999964

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-61  Score=443.89  Aligned_cols=255  Identities=25%  Similarity=0.409  Sum_probs=216.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      .++|++++.||+|+||+||+|+++.+|+.||||++++..    ...+.+.+|+++++.++|     |||+++++++.+++
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~l~~~~~~~~   81 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-----PFFVKLYFTFQDDE   81 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCS-----TTBCCEEEEEECSS
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCC-----CCeeEEEEEEEECC
Confidence            367999999999999999999999999999999997532    233568899999999877     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||| ||+|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++.                
T Consensus        82 ~~~ivmEy~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~----------------  143 (288)
T d1uu3a_          82 KLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE----------------  143 (288)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT----------------
T ss_pred             EEEEEEEccCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCC----------------
Confidence            999999999 899999998775  6999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                 ++.+||+|||+|+.....     ....+||+.|+|||++.+..++.++|||||||++|||++|..||.+
T Consensus       144 -----------~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~  212 (288)
T d1uu3a_         144 -----------DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA  212 (288)
T ss_dssp             -----------TSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -----------CceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCC
Confidence                       456777777777654321     2345799999999999999999999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+..+....+.+....+|                                                 ..+++.+++||.+
T Consensus       213 ~~~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~  243 (288)
T d1uu3a_         213 GNEYLIFQKIIKLEYDFP-------------------------------------------------EKFFPKARDLVEK  243 (288)
T ss_dssp             SSHHHHHHHHHTTCCCCC-------------------------------------------------TTCCHHHHHHHHT
T ss_pred             cCHHHHHHHHHcCCCCCC-------------------------------------------------ccCCHHHHHHHHH
Confidence            877766655533221111                                                 2456678999999


Q ss_pred             ccccCCCCCCCHHH------HhcCCCCCCCccCC
Q 047395          404 LLRYDPSSRLTAHD------ALKHPFFTRDYYRR  431 (432)
Q Consensus       404 ~L~~dP~~R~ta~e------lL~hp~f~~~~~~~  431 (432)
                      ||+.||++|||++|      +++||||++..+++
T Consensus       244 ~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~  277 (288)
T d1uu3a_         244 LLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN  277 (288)
T ss_dssp             TSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTT
T ss_pred             HccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHH
Confidence            99999999999998      58899999877765

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.2e-60  Score=451.62  Aligned_cols=262  Identities=30%  Similarity=0.480  Sum_probs=225.1

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .+.++|++++.||+|+||+||+|+++.+|+.||||++... ....+.+.+|+.++..++|     ||||++++++.+++.
T Consensus        23 ~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~H-----pnIv~~~~~~~~~~~   97 (350)
T d1koaa2          23 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH-----PTLVNLHDAFEDDNE   97 (350)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCC-----TTBCCEEEEEEETTE
T ss_pred             CCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCC-----CCCCcEEEEEEECCE
Confidence            3457899999999999999999999999999999998643 3445678899999999987     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||| ||+|.+++.... ..+++..++.++.||+.||+|||++|||||||||+|||+..                 
T Consensus        98 ~~ivmE~~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~-----------------  159 (350)
T d1koaa2          98 MVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-----------------  159 (350)
T ss_dssp             EEEEECCCCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-----------------
T ss_pred             EEEEEEcCCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc-----------------
Confidence            99999999 999999996543 36999999999999999999999999999999999999753                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                              +.++.+||+|||+|+......  ...+||+.|||||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       160 --------~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~  231 (350)
T d1koaa2         160 --------KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD  231 (350)
T ss_dssp             --------TTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             --------CCCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHH
Confidence                    234678999999887654433  3468999999999999999999999999999999999999999988887


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +.+..+......++..                                             ....+++.+++||.+||+.
T Consensus       232 ~~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~L~~  266 (350)
T d1koaa2         232 ETLRNVKSCDWNMDDS---------------------------------------------AFSGISEDGKDFIRKLLLA  266 (350)
T ss_dssp             HHHHHHHHTCCCSCCG---------------------------------------------GGGGCCHHHHHHHHHHCCS
T ss_pred             HHHHHHHhCCCCCCcc---------------------------------------------cccCCCHHHHHHHHHHccC
Confidence            7777765544333211                                             1134667799999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCcc
Q 047395          408 DPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      ||++|||++|+|+||||++...
T Consensus       267 dP~~R~t~~eil~hp~~~~~~~  288 (350)
T d1koaa2         267 DPNTRMTIHQALEHPWLTPGNA  288 (350)
T ss_dssp             SGGGSCCHHHHHHSTTTSCTTC
T ss_pred             ChhHCcCHHHHhcCcccCCCCC
Confidence            9999999999999999987653

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-60  Score=441.73  Aligned_cols=256  Identities=28%  Similarity=0.487  Sum_probs=215.8

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech-hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI-KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .+.|++++.||+|+||+||+|+++.+++.||||+++.. ....+.+.+|+++++.++|     ||||++++++.+.+.+|
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~H-----pnIv~l~~~~~~~~~~~   85 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH-----PNIVKLLDAFYYENNLW   85 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCC-----TTBCCEEEEEEETTEEE
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCC-----CCCCeEEEEEeeCCeEE
Confidence            46799999999999999999999999999999999743 3445678899999999877     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||| +|+|.+++.+.. ..+++..++.++.||+.||.|||++||+||||||+|||++                    
T Consensus        86 lvmEy~~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~--------------------  144 (288)
T d2jfla1          86 ILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT--------------------  144 (288)
T ss_dssp             EEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC--------------------
T ss_pred             EEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC--------------------
Confidence            999999 999999987654 4699999999999999999999999999999999999964                    


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHh-----CCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                             .++.+||+|||+|......   ....+||+.|+|||++.     +..|+.++|||||||++|||+||..||.+
T Consensus       145 -------~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~  217 (288)
T d2jfla1         145 -------LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE  217 (288)
T ss_dssp             -------TTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             -------CCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCC
Confidence                   4556788888887654322   23568999999999995     44588999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+..+.+..+.....+..                                              ..+..+++++.+||.+
T Consensus       218 ~~~~~~~~~i~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~  251 (288)
T d2jfla1         218 LNPMRVLLKIAKSEPPTL----------------------------------------------AQPSRWSSNFKDFLKK  251 (288)
T ss_dssp             SCGGGHHHHHHHSCCCCC----------------------------------------------SSGGGSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCC----------------------------------------------CccccCCHHHHHHHHH
Confidence            877666555443211100                                              0123467779999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||+.||++|||++|+|+||||+.+.
T Consensus       252 ~L~~dp~~R~t~~ell~hp~~~~~~  276 (288)
T d2jfla1         252 CLEKNVDARWTTSQLLQHPFVTVDS  276 (288)
T ss_dssp             HSCSSTTTSCCHHHHTTSGGGCCCC
T ss_pred             HccCChhHCcCHHHHhcCcccCCCC
Confidence            9999999999999999999998653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-60  Score=441.57  Aligned_cols=264  Identities=28%  Similarity=0.492  Sum_probs=225.3

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-------hhhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-------KYREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      +++.++|++++.||+|+||+||+|+++.+|+.||||++++..       ...+.+.+|+.+++.++|     ||||++++
T Consensus         6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~~~~   80 (293)
T d1jksa_           6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH-----PNVITLHE   80 (293)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC-----TTBCCEEE
T ss_pred             CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCC-----CCCCcEEE
Confidence            457789999999999999999999999999999999996422       234678899999999987     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      ++++.+.+|+||||| ||+|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++.++.       
T Consensus        81 ~~~~~~~~~iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~-------  151 (293)
T d1jksa_          81 VYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV-------  151 (293)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSS-------
T ss_pred             EEEECCEEEEEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCC-------
Confidence            999999999999999 899999998765  6999999999999999999999999999999999999876431       


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL  320 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~p  320 (432)
                                      ....+||+|||+|.....  ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       152 ----------------~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~P  215 (293)
T d1jksa_         152 ----------------PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP  215 (293)
T ss_dssp             ----------------SSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ----------------cccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCC
Confidence                            234689999999876543  33446899999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHH
Q 047395          321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL  400 (432)
Q Consensus       321 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  400 (432)
                      |.+.+..+.+..+......++...                                             ...+++.+++|
T Consensus       216 f~~~~~~~~~~~i~~~~~~~~~~~---------------------------------------------~~~~s~~~~~l  250 (293)
T d1jksa_         216 FLGDTKQETLANVSAVNYEFEDEY---------------------------------------------FSNTSALAKDF  250 (293)
T ss_dssp             SCCSSHHHHHHHHHTTCCCCCHHH---------------------------------------------HTTSCHHHHHH
T ss_pred             CCCCCHHHHHHHHHhcCCCCCchh---------------------------------------------cCCCCHHHHHH
Confidence            998887777766654433333221                                             23466778999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          401 LQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       401 i~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      |.+||+.||++|||++|+|+||||+....
T Consensus       251 i~~~L~~dP~~R~s~~eil~hp~~~~~~~  279 (293)
T d1jksa_         251 IRRLLVKDPKKRMTIQDSLQHPWIKPKDT  279 (293)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHSTTTCC---
T ss_pred             HHHHccCChhHCcCHHHHhcCcccCCCCh
Confidence            99999999999999999999999987544

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=5.4e-60  Score=449.28  Aligned_cols=260  Identities=27%  Similarity=0.490  Sum_probs=223.8

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      +.++|++++.||+|+||+||+|+++.+|+.||||+++... .....+.+|+.++..++|     |||+++++++++++.+
T Consensus        27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~H-----pnIv~~~~~~~~~~~~  101 (352)
T d1koba_          27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH-----PKLINLHDAFEDKYEM  101 (352)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCS-----TTBCCEEEEEECSSEE
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCC-----CCCCcEEEEEEECCEE
Confidence            4568999999999999999999999999999999987532 344567889999998876     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||| ||+|.+++.... .++++.+++.++.||+.||+|||++||+||||||+|||++.                  
T Consensus       102 ~ivmE~~~gg~L~~~~~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~------------------  162 (352)
T d1koba_         102 VLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET------------------  162 (352)
T ss_dssp             EEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS------------------
T ss_pred             EEEEEcCCCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc------------------
Confidence            9999999 999999887654 46999999999999999999999999999999999999752                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                             ...+.+||+|||+|......  .....||+.|+|||++.+..++.++|||||||++|+|+||..||.+.+..+
T Consensus       163 -------~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~  235 (352)
T d1koba_         163 -------KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE  235 (352)
T ss_dssp             -------TTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred             -------cCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                   24567899999998875543  334689999999999999999999999999999999999999999988888


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .+..+......+|..                                             ....+++++.+||.+||+.|
T Consensus       236 ~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~L~~d  270 (352)
T d1koba_         236 TLQNVKRCDWEFDED---------------------------------------------AFSSVSPEAKDFIKNLLQKE  270 (352)
T ss_dssp             HHHHHHHCCCCCCSS---------------------------------------------TTTTSCHHHHHHHHTTSCSS
T ss_pred             HHHHHHhCCCCCCcc---------------------------------------------cccCCCHHHHHHHHHHccCC
Confidence            777766544333311                                             11346777999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCc
Q 047395          409 PSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~  428 (432)
                      |.+|||++|+|+||||++..
T Consensus       271 p~~R~s~~eil~Hp~~~~~~  290 (352)
T d1koba_         271 PRKRLTVHDALEHPWLKGDH  290 (352)
T ss_dssp             GGGSCCHHHHHTSTTTSSCC
T ss_pred             hhHCcCHHHHhcCHhhCCCc
Confidence            99999999999999998754

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-61  Score=452.85  Aligned_cols=297  Identities=23%  Similarity=0.340  Sum_probs=213.6

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ...++|+++++||+|+||+||+|+++.+|+.||+|+++..  ......+.+|+.+++.++|     ||||+++++|.+.+
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~H-----pnIv~l~~~~~~~~   77 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-----PYIVGFYGAFYSDG   77 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCC-----TTBCCEEEEEECSS
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCC-----CCCCcEEEEEEECC
Confidence            3467899999999999999999999999999999999743  3345678899999998876     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      ++|+||||| ||+|.+++.+.+  .+++..++.++.||+.||.|||+ +||+||||||+|||++                
T Consensus        78 ~~~iVmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~----------------  139 (322)
T d1s9ja_          78 EISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN----------------  139 (322)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC----------------
T ss_pred             EEEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeEC----------------
Confidence            999999999 899999998765  69999999999999999999997 5999999999999964                


Q ss_pred             CCCccccccCCCCCCeEEeecCCccccc-CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEH-QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                 .++.+||+|||+|.... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+.
T Consensus       140 -----------~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~  208 (322)
T d1s9ja_         140 -----------SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA  208 (322)
T ss_dssp             -----------TTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCT
T ss_pred             -----------CCCCEEEeeCCCccccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence                       45568888888877543 233457899999999999999999999999999999999999999987665


Q ss_pred             HHHHHH-HHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          327 LEHLAM-MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       327 ~~~~~~-i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .+.... +....+...... ..................+ ................    ........+.++.|||.+||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~dli~~~L  282 (322)
T d1s9ja_         209 KELELMFGCQVEGDAAETP-PRPRTPGRPLSSYGMDSRP-PMAIFELLDYIVNEPP----PKLPSGVFSLEFQDFVNKCL  282 (322)
T ss_dssp             THHHHHC-------------------------------C-CCCHHHHHHHHHTSCC----CCCCBTTBCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCcccCC-ccccccccccccccccccc-chhHHHHHhhhhccCC----ccCccccCCHHHHHHHHHHc
Confidence            432221 222222111100 0000000000000000000 0000000000000000    00011246788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCc
Q 047395          406 RYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +.||++||||+|+|+||||++..
T Consensus       283 ~~dP~~R~ta~e~L~Hpf~~~~~  305 (322)
T d1s9ja_         283 IKNPAERADLKQLMVHAFIKRSD  305 (322)
T ss_dssp             CSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             CCChhHCcCHHHHhhCHhhCcCC
Confidence            99999999999999999997643

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.2e-60  Score=442.02  Aligned_cols=253  Identities=27%  Similarity=0.455  Sum_probs=221.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++..    ...+.+.+|+.+++.++|     |||+++++++.+.+.
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~~~~~~~~~~~   78 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH-----PFIIRMWGTFQDAQQ   78 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB-----TTBCCEEEEEECSSE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccC-----cChhheeeeEeeCCe
Confidence            56999999999999999999999999999999997532    234567889999998877     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||| |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++                  
T Consensus        79 ~~ivmE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~------------------  138 (316)
T d1fota_          79 IFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD------------------  138 (316)
T ss_dssp             EEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC------------------
T ss_pred             eeeEeeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEc------------------
Confidence            99999999 999999998765  689999999999999999999999999999999999954                  


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                               .++.+||+|||+|+.........+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+..+.
T Consensus       139 ---------~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  209 (316)
T d1fota_         139 ---------KNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT  209 (316)
T ss_dssp             ---------TTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ---------CCCCEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH
Confidence                     45678888888888777777778999999999999999999999999999999999999999998887776


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+.......|                                                 ..+++++.++|.+||+.||
T Consensus       210 ~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~L~~dp  240 (316)
T d1fota_         210 YEKILNAELRFP-------------------------------------------------PFFNEDVKDLLSRLITRDL  240 (316)
T ss_dssp             HHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHTCSCT
T ss_pred             HHHHHcCCCCCC-------------------------------------------------CCCCHHHHHHHHHHhhhCH
Confidence            665544322221                                                 2356678999999999999


Q ss_pred             CCCC-----CHHHHhcCCCCCCCccC
Q 047395          410 SSRL-----TAHDALKHPFFTRDYYR  430 (432)
Q Consensus       410 ~~R~-----ta~elL~hp~f~~~~~~  430 (432)
                      .+|+     |++++|+||||++..++
T Consensus       241 ~~R~~~~r~t~~~il~Hp~f~~i~~~  266 (316)
T d1fota_         241 SQRLGNLQNGTEDVKNHPWFKEVVWE  266 (316)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGSSCCHH
T ss_pred             HhccccchhhHHHHHcCcccccCCHH
Confidence            9996     99999999999986543

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-59  Score=430.98  Aligned_cols=252  Identities=23%  Similarity=0.415  Sum_probs=206.5

Q ss_pred             cCce-EEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--
Q 047395           94 TSRY-KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--  167 (432)
Q Consensus        94 ~~~y-~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--  167 (432)
                      .+|| ++.++||+|+||+||+|++..+++.||+|++...   ....+.+.+|+++++.++|     ||||+++++++.  
T Consensus         7 ~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~~~~~~~~~~   81 (270)
T d1t4ha_           7 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH-----PNIVRFYDSWESTV   81 (270)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEEEEES
T ss_pred             CCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCC-----CCeeeEEEEEeecc
Confidence            4455 7888999999999999999999999999998643   2344578899999998877     999999999864  


Q ss_pred             --CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cEeccCCCCcEEeecCCccccCCcc
Q 047395          168 --RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       168 --~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                        ...+|+||||| +|+|.+++.+..  .+++..++.++.||+.||+|||++|  |+||||||+|||++.          
T Consensus        82 ~~~~~~~ivmE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~----------  149 (270)
T d1t4ha_          82 KGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG----------  149 (270)
T ss_dssp             SSCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS----------
T ss_pred             ccCCEEEEEEeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeC----------
Confidence              45789999999 999999998765  6999999999999999999999998  999999999999742          


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                      .++.+||+|||+|+..... ....+||+.|+|||++.+ .++.++|||||||++|||++|+.||
T Consensus       150 ----------------~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf  212 (270)
T d1t4ha_         150 ----------------PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPY  212 (270)
T ss_dssp             ----------------TTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ----------------CCCCEEEeecCcceeccCCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCC
Confidence                            3456888888888754433 345689999999999876 5999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+......+...... +..|.                                             ......++++.+||
T Consensus       213 ~~~~~~~~~~~~i~~-~~~~~---------------------------------------------~~~~~~~~~~~~li  246 (270)
T d1t4ha_         213 SECQNAAQIYRRVTS-GVKPA---------------------------------------------SFDKVAIPEVKEII  246 (270)
T ss_dssp             TTCSSHHHHHHHHTT-TCCCG---------------------------------------------GGGGCCCHHHHHHH
T ss_pred             CCcccHHHHHHHHHc-CCCCc---------------------------------------------ccCccCCHHHHHHH
Confidence            876554433221110 11110                                             11234566789999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCC
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFT  425 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~  425 (432)
                      .+||+.||++|||++|+|+||||+
T Consensus       247 ~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         247 EGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHccCCHhHCcCHHHHhCCcccC
Confidence            999999999999999999999996

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-59  Score=442.54  Aligned_cols=260  Identities=24%  Similarity=0.427  Sum_probs=227.2

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+.++|++++.||+|+||+||+|++..+++.||||+++........+.+|+++|+.++|     |||+++++++++.+.+
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~H-----pnIv~~~~~~~~~~~~   76 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH-----RNILHLHESFESMEEL   76 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCC-----TTBCCEEEEEEETTEE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCC-----CCCCeEEEEEEECCEE
Confidence            45689999999999999999999999999999999998766666778899999999887     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      |+||||| |++|.+++...+ ..+++.+++.++.||+.||+|||++||+||||||+|||++.+                 
T Consensus        77 ~lvmE~~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~-----------------  138 (321)
T d1tkia_          77 VMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-----------------  138 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-----------------
T ss_pred             EEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCC-----------------
Confidence            9999999 899999997654 369999999999999999999999999999999999998542                 


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCC--ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                              ....+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       139 --------~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~  210 (321)
T d1tkia_         139 --------RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ  210 (321)
T ss_dssp             --------SCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             --------CceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHH
Confidence                    3457899999988765433  344578999999999999999999999999999999999999999988888


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      .+..|.+....++...                                             ...+++++.+||.+||+.|
T Consensus       211 ~~~~i~~~~~~~~~~~---------------------------------------------~~~~s~~~~~li~~~L~~d  245 (321)
T d1tkia_         211 IIENIMNAEYTFDEEA---------------------------------------------FKEISIEAMDFVDRLLVKE  245 (321)
T ss_dssp             HHHHHHHTCCCCCHHH---------------------------------------------HTTSCHHHHHHHHTTSCSS
T ss_pred             HHHHHHhCCCCCChhh---------------------------------------------ccCCCHHHHHHHHHHccCC
Confidence            7777766554444322                                             2345677899999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 047395          409 PSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~  427 (432)
                      |++|||++|+|+||||++.
T Consensus       246 p~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         246 RKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             GGGSCCHHHHHHSHHHHSC
T ss_pred             hhHCcCHHHHhcCHhhccC
Confidence            9999999999999999754

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-59  Score=441.46  Aligned_cols=252  Identities=25%  Similarity=0.440  Sum_probs=216.6

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++..    ...+.+.+|+.+++.++|     |||+++++++++.+.
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~h-----p~Iv~l~~~~~~~~~   79 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-----PFLTALKYAFQTHDR   79 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCC-----TTBCCEEEEEECSSE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCC-----CCEEEEEeeeccccc
Confidence            57999999999999999999999999999999997532    234567889999988876     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||| ||+|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++.                 
T Consensus        80 ~~iv~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~-----------------  140 (337)
T d1o6la_          80 LCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK-----------------  140 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-----------------
T ss_pred             cccceeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecC-----------------
Confidence            99999999 999999999875  6999999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC---CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN  326 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~  326 (432)
                                ++.+||+|||+|+....   .....+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+.
T Consensus       141 ----------~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~  210 (337)
T d1o6la_         141 ----------DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH  210 (337)
T ss_dssp             ----------TSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ----------CCCEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH
Confidence                      45677777777764322   23457899999999999999999999999999999999999999999887


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+....+......+|                                                 ..+++++.+||.+||+
T Consensus       211 ~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~dli~~~L~  241 (337)
T d1o6la_         211 ERLFELILMEEIRFP-------------------------------------------------RTLSPEAKSLLAGLLK  241 (337)
T ss_dssp             HHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCCC-------------------------------------------------ccCCHHHHHHHHhhcc
Confidence            766655544322222                                                 2456778999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCCCCCCcc
Q 047395          407 YDPSSRLT-----AHDALKHPFFTRDYY  429 (432)
Q Consensus       407 ~dP~~R~t-----a~elL~hp~f~~~~~  429 (432)
                      +||++|++     ++|+++||||++..+
T Consensus       242 ~dP~~R~~~~~~~~~eil~Hp~f~~i~~  269 (337)
T d1o6la_         242 KDPKQRLGGGPSDAKEVMEHRFFLSINW  269 (337)
T ss_dssp             SSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             CCchhhcccccccHHHHHcCcccccCCH
Confidence            99999994     999999999987543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.7e-59  Score=444.49  Aligned_cols=252  Identities=26%  Similarity=0.457  Sum_probs=221.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++..    ...+.+.+|+++++.++|     |||+++++++...+.
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~h-----pnIv~~~~~~~~~~~  115 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-----PFLVKLEFSFKDNSN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC-----TTBCCEEEEEECSSE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCC-----CcEeecccccccccc
Confidence            68999999999999999999999999999999997432    234567889999988876     999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +++||||+ +|+|.+++.+.+  .+++..++.++.||+.||.|||++|||||||||+|||++                  
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~------------------  175 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID------------------  175 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC------------------
T ss_pred             cccccccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccC------------------
Confidence            99999999 999999998875  699999999999999999999999999999999999954                  


Q ss_pred             CccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcHHH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH  329 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~~~  329 (432)
                               .++.+||+|||+|+.........+||+.|||||++.+..++.++|||||||++|||+||..||.+.+....
T Consensus       176 ---------~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  246 (350)
T d1rdqe_         176 ---------QQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI  246 (350)
T ss_dssp             ---------TTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ---------CCCCEEeeeceeeeecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH
Confidence                     45678888888888777767778899999999999999999999999999999999999999998877766


Q ss_pred             HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCC
Q 047395          330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP  409 (432)
Q Consensus       330 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  409 (432)
                      ...+......+|                                                 ..+++++.+||.+||+.||
T Consensus       247 ~~~i~~~~~~~p-------------------------------------------------~~~s~~~~~li~~~L~~dP  277 (350)
T d1rdqe_         247 YEKIVSGKVRFP-------------------------------------------------SHFSSDLKDLLRNLLQVDL  277 (350)
T ss_dssp             HHHHHHCCCCCC-------------------------------------------------TTCCHHHHHHHHHHSCSCT
T ss_pred             HHHHhcCCCCCC-------------------------------------------------ccCCHHHHHHHHHHhhhCH
Confidence            666544322222                                                 2456778999999999999


Q ss_pred             CCCC-----CHHHHhcCCCCCCCcc
Q 047395          410 SSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       410 ~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      .+|+     |++|+++||||++..+
T Consensus       278 ~kR~~~~r~t~~ell~Hp~f~~~~~  302 (350)
T d1rdqe_         278 TKRFGNLKNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred             HhccccccccHHHHHcCccccCCCH
Confidence            9995     9999999999988655

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-59  Score=430.09  Aligned_cols=250  Identities=22%  Similarity=0.364  Sum_probs=198.4

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--CC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--RN  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--~~  169 (432)
                      ++|++++.||+|+||+||+|+++.+|+.||||+++..   ....+.+.+|++++..++|     |||+++++++.+  .+
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~~~~~~~~~~~~   78 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH-----PNIVRYYDRIIDRTNT   78 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCC-----TTBCCEEEEEEC----
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCC-----CCEeeEEEEEEeCCCC
Confidence            5799999999999999999999999999999998643   2334567889999888876     999999998854  46


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-----cEeccCCCCcEEeecCCccccCCc
Q 047395          170 HICIVFEML-GPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAFMHDLR-----LIHTDLKPENILFVSPEYLKIPDY  241 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlkp~NIli~~~~~~k~~df  241 (432)
                      .+|+||||| +|+|.+++.+.  ....+++..++.++.||+.||+|||++|     |+||||||+|||++.         
T Consensus        79 ~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~---------  149 (269)
T d2java1          79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG---------  149 (269)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECT---------
T ss_pred             EEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCC---------
Confidence            789999999 99999998752  2246999999999999999999999876     999999999999654         


Q ss_pred             ccccCCCCCccccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCC
Q 047395          242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~  318 (432)
                                        ++.+||+|||+|+.....   ....+||+.|+|||++.+..|+.++|||||||++|||+||.
T Consensus       150 ------------------~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~  211 (269)
T d2java1         150 ------------------KQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM  211 (269)
T ss_dssp             ------------------TSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             ------------------CCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCC
Confidence                              455677777766553322   23468999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||.+.+..+....+.....+                                                ..+..+++++.
T Consensus       212 ~Pf~~~~~~~~~~~i~~~~~~------------------------------------------------~~~~~~s~~l~  243 (269)
T d2java1         212 PPFTAFSQKELAGKIREGKFR------------------------------------------------RIPYRYSDELN  243 (269)
T ss_dssp             CSCCCSSHHHHHHHHHHTCCC------------------------------------------------CCCTTSCHHHH
T ss_pred             CCCCCCCHHHHHHHHHcCCCC------------------------------------------------CCCcccCHHHH
Confidence            999988776665555332110                                                01124567799


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCC
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHPFF  424 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp~f  424 (432)
                      +||.+||+.||++|||++|+|+|||+
T Consensus       244 ~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         244 EIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            99999999999999999999999996

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-59  Score=439.12  Aligned_cols=254  Identities=27%  Similarity=0.395  Sum_probs=210.3

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ...+|+++++||+|+||+||+|++..+++.||||+++..    ....+.+.+|+.++..++|     ||||++++++.++
T Consensus        13 p~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~H-----pnIv~~~~~~~~~   87 (309)
T d1u5ra_          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH-----PNTIQYRGCYLRE   87 (309)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEEEET
T ss_pred             cHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCC-----CCEeeEEEEEEEC
Confidence            455799999999999999999999999999999998643    2334568889999998876     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||| +++|..++....  ++++..++.++.||+.||.|||++|||||||||+|||++.+              
T Consensus        88 ~~~~iv~E~~~~g~l~~~~~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~--------------  151 (309)
T d1u5ra_          88 HTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP--------------  151 (309)
T ss_dssp             TEEEEEEECCSEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT--------------
T ss_pred             CEEEEEEEecCCCchHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCC--------------
Confidence            9999999999 777776666543  69999999999999999999999999999999999997654              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhC---CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                   +.+||+|||+|..... ....+||+.|+|||++.+   ..|+.++|||||||++|||++|..||.+.
T Consensus       152 -------------~~~Kl~DFG~a~~~~~-~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~  217 (309)
T d1u5ra_         152 -------------GLVKLGDFGSASIMAP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM  217 (309)
T ss_dssp             -------------TEEEECCCTTCBSSSS-BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             -------------CCEEEeecccccccCC-CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCC
Confidence                         4567777777665433 234679999999999964   35899999999999999999999999887


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+.+..+.....+.+                                               ....+++.+.+||.+|
T Consensus       218 ~~~~~~~~i~~~~~~~~-----------------------------------------------~~~~~s~~~~~li~~~  250 (309)
T d1u5ra_         218 NAMSALYHIAQNESPAL-----------------------------------------------QSGHWSEYFRNFVDSC  250 (309)
T ss_dssp             CHHHHHHHHHHSCCCCC-----------------------------------------------SCTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHhCCCCCC-----------------------------------------------CCCCCCHHHHHHHHHH
Confidence            77665554433211110                                               0124567799999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCc
Q 047395          405 LRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      |+.||++|||++|+|+||||.+..
T Consensus       251 L~~dP~~Rpt~~ell~Hp~~~~~~  274 (309)
T d1u5ra_         251 LQKIPQDRPTSEVLLKHRFVLRER  274 (309)
T ss_dssp             TCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             CcCChhHCcCHHHHHhCHHhcCCC
Confidence            999999999999999999997643

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=3.2e-58  Score=423.13  Aligned_cols=255  Identities=29%  Similarity=0.511  Sum_probs=215.7

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----------hhhhHhHHHHHHHHHHHH-hcCCCCCceeEe
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----------KKYREAAMTEIDVLELLK-RYDRSGSRCVQI  161 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----------~~~~~~~~~E~~~l~~l~-~~~~~~~~iv~~  161 (432)
                      +.++|++.+.||+|+||+||+|++..+|+.||||+++..          ....+.+.+|+.+++.+. |     |||+++
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-----pnIv~~   75 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH-----PNIIQL   75 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC-----TTBCCE
T ss_pred             CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCC-----CCeEEE
Confidence            357899999999999999999999999999999998642          223456889999999997 5     999999


Q ss_pred             ecccccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCC
Q 047395          162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       162 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      ++++.+++.+||||||| +++|.+++..++  .+++..++.++.||+.||+|||++||+||||||+|||++         
T Consensus        76 ~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---------  144 (277)
T d1phka_          76 KDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---------  144 (277)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---------
T ss_pred             EeecccCcceEEEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEc---------
Confidence            99999999999999999 899999998765  699999999999999999999999999999999999965         


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhC------CCCCccchHHHHHHHHH
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILG------LGWSYPCDMWSVGCILI  312 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~------~~~~~~sDiwSlGvil~  312 (432)
                                        .++.+||+|||++.....  .....+||+.|+|||++.+      ..++.++||||+||++|
T Consensus       145 ------------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvily  206 (277)
T d1phka_         145 ------------------DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY  206 (277)
T ss_dssp             ------------------TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHH
T ss_pred             ------------------CCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhh
Confidence                              455677777777765443  2344679999999999963      34788999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhccc
Q 047395          313 ELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH  392 (432)
Q Consensus       313 elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (432)
                      +|++|+.||.+.+..+....+......++.                                             .....
T Consensus       207 eml~g~~Pf~~~~~~~~~~~i~~~~~~~~~---------------------------------------------~~~~~  241 (277)
T d1phka_         207 TLLAGSPPFWHRKQMLMLRMIMSGNYQFGS---------------------------------------------PEWDD  241 (277)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCCCCT---------------------------------------------TTGGG
T ss_pred             hhccCCCCCCCCCHHHHHHHHHhCCCCCCC---------------------------------------------ccccc
Confidence            999999999988877766655443222111                                             11235


Q ss_pred             chHHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 047395          393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       393 ~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~  426 (432)
                      +|+++++||.+||+.||++|||++|+|+||||++
T Consensus       242 ~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         242 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             SCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            6778999999999999999999999999999975

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-58  Score=428.21  Aligned_cols=282  Identities=33%  Similarity=0.514  Sum_probs=226.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|++++.||+|+||+||+|++..+|+.||||+++...   ...+.+.+|+++++.++|     |||+++++++.+++.+
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~H-----p~Iv~~~~~~~~~~~~   76 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH-----PNIVKLLDVIHTENKL   76 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCC-----TTBCCEEEEEEETTEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCC-----CcEEEeccccccccce
Confidence            57999999999999999999999999999999996433   234678899999998876     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |+||||+++++.+++.......+++..++.++.||+.||+|||++|||||||||+|||++                    
T Consensus        77 ~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~--------------------  136 (298)
T d1gz8a_          77 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN--------------------  136 (298)
T ss_dssp             EEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC--------------------
T ss_pred             eEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeec--------------------
Confidence            999999988888888766556799999999999999999999999999999999999964                    


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                             .++.+||+|||.|+.....   ....+||+.|+|||++.... ++.++|||||||++|+|++|+.||.+.+..
T Consensus       137 -------~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~  209 (298)
T d1gz8a_         137 -------TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI  209 (298)
T ss_dssp             -------TTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             -------ccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH
Confidence                   4456777888877654332   33458999999999988776 478999999999999999999999999989


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +.+..+....+.++...+........     ....++....               .........++.++.+||.+||+.
T Consensus       210 ~~~~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---------------~~~~~~~~~~s~~~~dll~~mL~~  269 (298)
T d1gz8a_         210 DQLFRIFRTLGTPDEVVWPGVTSMPD-----YKPSFPKWAR---------------QDFSKVVPPLDEDGRSLLSQMLHY  269 (298)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGSTT-----CCTTSCCCCC---------------CCHHHHSTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHHhcCCCchhhccccccccc-----cccccccccc---------------cchhhhccCCCHHHHHHHHHHccC
Confidence            98888888888766544332211110     0011111000               011122346778899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCc
Q 047395          408 DPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~~~  428 (432)
                      ||++|||++|+|+||||++..
T Consensus       270 dP~~R~t~~ell~H~ff~~~~  290 (298)
T d1gz8a_         270 DPNKRISAKAALAHPFFQDVT  290 (298)
T ss_dssp             STTTSCCHHHHHTSGGGTTCC
T ss_pred             ChhHCcCHHHHhCCHhhccCC
Confidence            999999999999999998753

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-58  Score=435.59  Aligned_cols=293  Identities=27%  Similarity=0.519  Sum_probs=235.3

Q ss_pred             CCCceeecCce---ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCC
Q 047395           82 DGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSG  155 (432)
Q Consensus        82 ~~~~~~~~~~~---~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~  155 (432)
                      .|++...+++.   +.++|+++++||+|+||+||+|+++.+|+.||||+++..   ....+.+.+|+.+|+.++|     
T Consensus         2 ~~~~~~~~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h-----   76 (346)
T d1cm8a_           2 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH-----   76 (346)
T ss_dssp             CSBCCEECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCB-----
T ss_pred             CCcEEEeccCceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCC-----
Confidence            35566666665   789999999999999999999999999999999999742   2345678899999999987     


Q ss_pred             CceeEeecccccCC------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEE
Q 047395          156 SRCVQIRNWFDYRN------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL  229 (432)
Q Consensus       156 ~~iv~~~~~~~~~~------~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  229 (432)
                      ||||+++++|...+      ++|+|||||+.+|..+++..   .+++..++.++.||+.||+|||++||+||||||+|||
T Consensus        77 pniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL  153 (346)
T d1cm8a_          77 ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLA  153 (346)
T ss_dssp             TTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             CCeeEEEEEeccCccccccceEEEEEecccccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhh
Confidence            99999999987554      67999999999999988764   4999999999999999999999999999999999999


Q ss_pred             eecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCC-CCCccchHHHHH
Q 047395          230 FVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVG  308 (432)
Q Consensus       230 i~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlG  308 (432)
                      ++                           .++.+||+|||+|.......+..+||+.|+|||++.+. .++.++||||||
T Consensus       154 ~~---------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG  206 (346)
T d1cm8a_         154 VN---------------------------EDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG  206 (346)
T ss_dssp             EC---------------------------TTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHH
T ss_pred             cc---------------------------cccccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhcch
Confidence            54                           45677888888888777777778999999999999875 468999999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhh
Q 047395          309 CILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ  388 (432)
Q Consensus       309 vil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (432)
                      |++|+|++|.+||.+.+..+.+..+....+.+|..+....................                  ......
T Consensus       207 vil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~  268 (346)
T d1cm8a_         207 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE------------------KKDFAS  268 (346)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCC------------------CCCGGG
T ss_pred             HHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCccc------------------ccchHH
Confidence            99999999999999999999999999999999988776554332211111100000                  000112


Q ss_pred             hcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       389 ~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .....++.+.+||.+||+.||++||||+|+|+||||++.
T Consensus       269 ~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         269 ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             hccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence            234567889999999999999999999999999999863

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-58  Score=429.60  Aligned_cols=276  Identities=26%  Similarity=0.451  Sum_probs=214.5

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeechhh------hhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK------YREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      .+++||+|+||+||+|+++.+|+.||||+++....      ....+.+|+.+++.++|     ||||++++++..++++|
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~h-----pnIv~~~~~~~~~~~~~   76 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH-----PNIIGLLDAFGHKSNIS   76 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC-----TTBCCEEEEECCTTCCE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCC-----CCEeEEEeeeccCCcee
Confidence            46899999999999999999999999999864322      23467899999999987     99999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          173 IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       173 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      +||||+.+.+...+.... ..+++..++.++.||+.||+|||++||+||||||+|||++.                    
T Consensus        77 ivmE~~~~~~~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~--------------------  135 (299)
T d1ua2a_          77 LVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE--------------------  135 (299)
T ss_dssp             EEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--------------------
T ss_pred             ehhhhhcchHHhhhhhcc-cCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecC--------------------
Confidence            999999544444444432 46999999999999999999999999999999999999654                    


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcHH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLE  328 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~~  328 (432)
                             .+.+||+|||+|......   ....+||+.|+|||++.+. .|+.++|||||||++|||++|.+||.+.++.+
T Consensus       136 -------~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~  208 (299)
T d1ua2a_         136 -------NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD  208 (299)
T ss_dssp             -------TCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -------CCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH
Confidence                   455667777766543332   2345799999999999765 57999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ++..|.+..+.++...+..........      .+.....               ..........++++.+||.+||+.|
T Consensus       209 ~l~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~---------------~~~~~~~~~~s~~~~dll~~~L~~d  267 (299)
T d1ua2a_         209 QLTRIFETLGTPTEEQWPDMCSLPDYV------TFKSFPG---------------IPLHHIFSAAGDDLLDLIQGLFLFN  267 (299)
T ss_dssp             HHHHHHHHHCCCCTTTSSSTTSSTTCC------CCCCCCC---------------CCHHHHCTTCCHHHHHHHHHHHCSS
T ss_pred             HHHHHHHhcCCCChhhccchhccchhh------hhccCCC---------------CChHHhcccCCHHHHHHHHHHccCC
Confidence            999999988877654322211111000      0000000               0011123456778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCc
Q 047395          409 PSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       409 P~~R~ta~elL~hp~f~~~~  428 (432)
                      |++||||+|+|+||||++..
T Consensus       268 P~~R~sa~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         268 PCARITATQALKMKYFSNRP  287 (299)
T ss_dssp             TTTSCCHHHHHTSGGGTSSS
T ss_pred             hhhCcCHHHHhCCHhhCCCC
Confidence            99999999999999998754

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.6e-57  Score=434.42  Aligned_cols=258  Identities=25%  Similarity=0.412  Sum_probs=209.5

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      ++|++++.||+|+||+||+|++..+|+.||||++.+..    .....+.+|..++..+++.  .||||+++++++...+.
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~--~hpnIv~l~~~~~~~~~   81 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG--DCPFIVCMSYAFHTPDK   81 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS--CCTTBCCEEEEEECSSE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcC--CCCcEEEEEEEEEECCE
Confidence            57999999999999999999999999999999997432    2233456676666666542  35999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +|+||||| ||+|.++|.+..  .+++..++.++.||+.||.|||++|||||||||+|||++.                 
T Consensus        82 ~~ivmE~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~-----------------  142 (364)
T d1omwa3          82 LSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE-----------------  142 (364)
T ss_dssp             EEEEECCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS-----------------
T ss_pred             EEEEEEecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcC-----------------
Confidence            99999999 999999998865  6899999999999999999999999999999999999654                 


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC-CccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ-EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                                .+.+||+|||+|+.... .....+||+.|+|||++.+ ..|+.++|||||||++|||+||+.||.+.+..
T Consensus       143 ----------~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~  212 (364)
T d1omwa3         143 ----------HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK  212 (364)
T ss_dssp             ----------SSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSS
T ss_pred             ----------CCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHH
Confidence                      45677777777765433 3345689999999999975 56899999999999999999999999875543


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +............+                                              ..++.+++++++||.+||+.
T Consensus       213 ~~~~~~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~~  246 (364)
T d1omwa3         213 DKHEIDRMTLTMAV----------------------------------------------ELPDSFSPELRSLLEGLLQR  246 (364)
T ss_dssp             CHHHHHHHSSSCCC----------------------------------------------CCCSSSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHhcccCCC----------------------------------------------CCCCCCCHHHHHHHHHHccc
Confidence            33222211111100                                              11235677899999999999


Q ss_pred             CCCCCCC-----HHHHhcCCCCCCCcc
Q 047395          408 DPSSRLT-----AHDALKHPFFTRDYY  429 (432)
Q Consensus       408 dP~~R~t-----a~elL~hp~f~~~~~  429 (432)
                      ||++|||     |+|+++||||++..+
T Consensus       247 dP~~R~t~~~~~a~eil~Hp~f~~i~~  273 (364)
T d1omwa3         247 DVNRRLGCLGRGAQEVKESPFFRSLDW  273 (364)
T ss_dssp             STTTSTTTSSSTHHHHHTSGGGTTCCH
T ss_pred             CHHHhCCCcccCHHHHHcCccccCCCH
Confidence            9999999     899999999987654

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-58  Score=431.48  Aligned_cols=252  Identities=25%  Similarity=0.392  Sum_probs=211.8

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh----hhhHhHHHHHHHHH-HHHhcCCCCCceeEeecccccCC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLE-LLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~-~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ++|++++.||+|+||+||+|+++.+++.||||++++..    ...+.+..|..++. .++|     |||+++++++.+++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~h-----p~Iv~~~~~~~~~~   76 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH-----PFLTHMFCTFQTKE   76 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTC-----TTBCCEEEEEECSS
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCC-----CcEEEEEEEEccCC
Confidence            57999999999999999999999999999999997532    22345666776665 4555     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||| +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.                
T Consensus        77 ~~yivmEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~----------------  138 (320)
T d1xjda_          77 NLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK----------------  138 (320)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT----------------
T ss_pred             ceeEEEeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecC----------------
Confidence            999999999 999999998765  6999999999999999999999999999999999999654                


Q ss_pred             CCccccccCCCCCCeEEeecCCccccc---CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE  325 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~  325 (432)
                                 .+.+||+|||+++...   ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+
T Consensus       139 -----------~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~  207 (320)
T d1xjda_         139 -----------DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD  207 (320)
T ss_dssp             -----------TSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -----------CCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCC
Confidence                       4566777777765432   22334679999999999999999999999999999999999999999888


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....+.......|                                                 ..+++.+.+||.+||
T Consensus       208 ~~~~~~~i~~~~~~~p-------------------------------------------------~~~s~~~~dli~~~L  238 (320)
T d1xjda_         208 EEELFHSIRMDNPFYP-------------------------------------------------RWLEKEAKDLLVKLF  238 (320)
T ss_dssp             HHHHHHHHHHCCCCCC-------------------------------------------------TTSCHHHHHHHHHHS
T ss_pred             HHHHHHHHHcCCCCCC-------------------------------------------------ccCCHHHHHHHHHhc
Confidence            7776665543222111                                                 245677899999999


Q ss_pred             ccCCCCCCCHH-HHhcCCCCCCCcc
Q 047395          406 RYDPSSRLTAH-DALKHPFFTRDYY  429 (432)
Q Consensus       406 ~~dP~~R~ta~-elL~hp~f~~~~~  429 (432)
                      +.||++|||+. |+++||||++..+
T Consensus       239 ~~dP~~R~s~~~~l~~hpff~~~~~  263 (320)
T d1xjda_         239 VREPEKRLGVRGDIRQHPLFREINW  263 (320)
T ss_dssp             CSSGGGSBTTBSCGGGSGGGTTCCH
T ss_pred             ccCCCCCcCHHHHHHhCchhccCCH
Confidence            99999999995 8999999987543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-57  Score=424.37  Aligned_cols=283  Identities=30%  Similarity=0.498  Sum_probs=222.0

Q ss_pred             cCceEEEeeeecccceEEEEEEecCC-CcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc---
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRET-GETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD---  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~-~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~---  166 (432)
                      .++|+++++||+|+||+||+|++..+ ++.||||+++..   ........+|+.+++.|...  .||||+++++++.   
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~--~HpnIv~~~~~~~~~~   83 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF--EHPNVVRLFDVCTVSR   83 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHT--CCTTBCCEEEEEEEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhc--CCCCcceeeeeecccc
Confidence            57899999999999999999999765 677999998642   22334577899999888642  3499999999874   


Q ss_pred             --cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccc
Q 047395          167 --YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT  244 (432)
Q Consensus       167 --~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~  244 (432)
                        ....++++|||+.+.+..+........+++..++.++.||+.||+|||++||+||||||+|||++.            
T Consensus        84 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~------------  151 (305)
T d1blxa_          84 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS------------  151 (305)
T ss_dssp             CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT------------
T ss_pred             cccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcC------------
Confidence              346899999999666555555555567999999999999999999999999999999999999654            


Q ss_pred             cCCCCCccccccCCCCCCeEEeecCCccccc--CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 047395          245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH--QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                     .+.+||+|||++....  ......+||+.|+|||++.+..|+.++|||||||++|||++|++||.
T Consensus       152 ---------------~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~  216 (305)
T d1blxa_         152 ---------------SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR  216 (305)
T ss_dssp             ---------------TCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ---------------CCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCC
Confidence                           4456677777665432  22345689999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.+..+.+..+....+.++...+...............                      ..........+++.+.+||.
T Consensus       217 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~s~~~~dli~  274 (305)
T d1blxa_         217 GSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKS----------------------AQPIEKFVTDIDELGKDLLL  274 (305)
T ss_dssp             CSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCC----------------------CCCGGGTCCSCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhhCCCchhcccccccchhhhhcccc----------------------ccchhhccccCCHHHHHHHH
Confidence            99999999999998887765433322111111110000                      00111233467788999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +||++||++||||+|+|+||||++.
T Consensus       275 ~mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         275 KCLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             HHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             HHCcCChhHCcCHHHHhcChhhcCc
Confidence            9999999999999999999999874

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-58  Score=436.34  Aligned_cols=263  Identities=26%  Similarity=0.464  Sum_probs=210.2

Q ss_pred             eecCceEEEe-eeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc---
Q 047395           92 NLTSRYKILR-KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY---  167 (432)
Q Consensus        92 ~~~~~y~i~~-~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~---  167 (432)
                      .+.++|++++ .||+|+||+||+|++..+++.||||+++..    ....+|+.++..+.+    ||||++++++|++   
T Consensus         8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~~----hpnIv~l~~~~~~~~~   79 (335)
T d2ozaa1           8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQ----CPHIVRIVDVYENLYA   79 (335)
T ss_dssp             CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTT----STTBCCEEEEEEEEET
T ss_pred             CcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhcC----CCCCCeEEEEEeeccc
Confidence            3457899885 599999999999999999999999999753    346678888766532    3999999999864   


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          168 -RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       168 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                       ...+|+||||| ||+|.++|.+.+...+++.+++.++.||+.||+|||++||+||||||+|||++.             
T Consensus        80 ~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~-------------  146 (335)
T d2ozaa1          80 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS-------------  146 (335)
T ss_dssp             TEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESC-------------
T ss_pred             CCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccc-------------
Confidence             46799999999 899999998765567999999999999999999999999999999999999865             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                 ....+.+||+|||+|+....  .....+||+.|+|||++.+..|+.++|||||||++|+|+||.+||.+
T Consensus       147 -----------~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~  215 (335)
T d2ozaa1         147 -----------KRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS  215 (335)
T ss_dssp             -----------SSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEE
T ss_pred             -----------ccccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCC
Confidence                       22456789999999876433  33456899999999999998999999999999999999999999987


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHH
Q 047395          324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQG  403 (432)
Q Consensus       324 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  403 (432)
                      .+.......+...                   +..+...+|.                      .....+++++.+||.+
T Consensus       216 ~~~~~~~~~~~~~-------------------i~~~~~~~~~----------------------~~~~~~s~~~~~li~~  254 (335)
T d2ozaa1         216 NHGLAISPGMKTR-------------------IRMGQYEFPN----------------------PEWSEVSEEVKMLIRN  254 (335)
T ss_dssp             TTCC--------C-------------------CCSCSSSCCT----------------------THHHHSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHH-------------------HhcCCCCCCC----------------------cccccCCHHHHHHHHH
Confidence            6554433222111                   0111111111                      1112467789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 047395          404 LLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       404 ~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ||+.||++|||+.|+|+||||++.
T Consensus       255 ~L~~dP~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         255 LLKTEPTQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             HSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred             HccCChhHCcCHHHHHcCHHhhCC
Confidence            999999999999999999999654

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-57  Score=416.70  Aligned_cols=251  Identities=26%  Similarity=0.412  Sum_probs=207.9

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhh-------hhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      +.++|++.+.||+|+||+||+|++..+|+.||||+++....       ....+.+|+.+++.+++   .||||+++++++
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~---~h~nIv~~~~~~   78 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---GFSGVIRLLDWF   78 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS---SSCSBCCEEEEE
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhcc---CCCCccEEEEEE
Confidence            46789999999999999999999999999999999975321       12346789999999873   459999999999


Q ss_pred             ccCCeEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          166 DYRNHICIVFEML-G-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                      .+.+.+|+||||+ + +++.+++....  .+++.+++.++.||+.||+|||++||+||||||+|||++.           
T Consensus        79 ~~~~~~~lv~e~~~~~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~-----------  145 (273)
T d1xwsa_          79 ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL-----------  145 (273)
T ss_dssp             ECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET-----------
T ss_pred             eeCCeEEEEEEeccCcchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEec-----------
Confidence            9999999999999 4 58888888765  6999999999999999999999999999999999999753           


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCC-ccccccCCCcchhHHHhCCCC-CccchHHHHHHHHHHHHhCCCCC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~-~~~sDiwSlGvil~elltg~~pf  321 (432)
                                     +.+.+||+|||+|...... ....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||
T Consensus       146 ---------------~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf  210 (273)
T d1xwsa_         146 ---------------NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF  210 (273)
T ss_dssp             ---------------TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ---------------CCCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCC
Confidence                           2356788888887754333 345689999999999987765 57799999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+.      +.+.                       ...                          ....+++++.+||
T Consensus       211 ~~~~~------i~~~-----------------------~~~--------------------------~~~~~s~~~~~li  235 (273)
T d1xwsa_         211 EHDEE------IIRG-----------------------QVF--------------------------FRQRVSSECQHLI  235 (273)
T ss_dssp             CSHHH------HHHC-----------------------CCC--------------------------CSSCCCHHHHHHH
T ss_pred             CCchH------Hhhc-----------------------ccC--------------------------CCCCCCHHHHHHH
Confidence            75221      1110                       001                          1124577799999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          402 QGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      .+||+.||++|||++|+|+||||++...
T Consensus       236 ~~~L~~dp~~R~s~~eil~hp~~~~~~~  263 (273)
T d1xwsa_         236 RWCLALRPSDRPTFEEIQNHPWMQDVLL  263 (273)
T ss_dssp             HHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             HHHccCCHhHCcCHHHHhcCHhhCCCCC
Confidence            9999999999999999999999987543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-56  Score=423.65  Aligned_cols=302  Identities=26%  Similarity=0.435  Sum_probs=229.5

Q ss_pred             CCceeecCce---ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCC
Q 047395           83 GHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGS  156 (432)
Q Consensus        83 ~~~~~~~~~~---~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~  156 (432)
                      .+|++.+|+.   +.++|+++++||+|+||+||+|++..+|+.||||+++..   ......+.+|+.+++.++|     |
T Consensus         2 ~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~h-----p   76 (355)
T d2b1pa1           2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-----K   76 (355)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCC-----T
T ss_pred             CCEEEEeCCcceeecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCC-----C
Confidence            3678999994   458999999999999999999999999999999999743   2334567899999998876     9


Q ss_pred             ceeEeecccc------cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEe
Q 047395          157 RCVQIRNWFD------YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF  230 (432)
Q Consensus       157 ~iv~~~~~~~------~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  230 (432)
                      ||++++++|.      ..+++|+|||||.++|.+.+..    .+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus        77 nIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~----~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~  152 (355)
T d2b1pa1          77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV  152 (355)
T ss_dssp             TBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             CeeEEEEEEecccccccCceeEEEEeccchHHHHhhhc----CCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc
Confidence            9999999985      3478999999997777776642    58999999999999999999999999999999999997


Q ss_pred             ecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCCCCccchHHHHH
Q 047395          231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVG  308 (432)
Q Consensus       231 ~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlG  308 (432)
                      +.+                           +.++++|||++.....  .....+||+.|+|||++.+..++.++||||+|
T Consensus       153 ~~~---------------------------~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG  205 (355)
T d2b1pa1         153 KSD---------------------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG  205 (355)
T ss_dssp             CTT---------------------------CCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHH
T ss_pred             ccc---------------------------cceeeechhhhhccccccccccccccccccChhhhcCCCCCCCccccccc
Confidence            654                           4456666665544332  23445789999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhh
Q 047395          309 CILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ  388 (432)
Q Consensus       309 vil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (432)
                      |++|+|++|++||.+.+.......+....+..+.+.+.........+........   .......   .. .........
T Consensus       206 ~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~-~~~~~~~~~  278 (355)
T d2b1pa1         206 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA---GLTFPKL---FP-DSLFPADSE  278 (355)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCC---CCCHHHH---SC-GGGSCCSSH
T ss_pred             chHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccc---ccccccc---cc-ccccccccc
Confidence            9999999999999999999999999998888888777766655544444321110   0111100   00 000011111


Q ss_pred             hcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       389 ~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      .....++++++||.+||++||++||||+|||+||||+..
T Consensus       279 ~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         279 HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             HHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             ccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            223457789999999999999999999999999999864

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.3e-56  Score=413.42  Aligned_cols=278  Identities=31%  Similarity=0.482  Sum_probs=218.1

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|+++++||+|+||+||+|+++ +|+.||||+++...   .....+.+|+.+++.++|     |||+++++++...+..
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h-----pnIv~~~~~~~~~~~~   75 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKH-----SNIVKLYDVIHTKKRL   75 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCC-----TTBCCEEEEEECSSCE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCC-----CcEEeeeeecccCCce
Confidence            68999999999999999999985 78999999996432   234678899999998876     9999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |++||++++++...+.... ..+++..++.++.||+.||+|||++|||||||||+|||++                    
T Consensus        76 ~i~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~--------------------  134 (286)
T d1ob3a_          76 VLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN--------------------  134 (286)
T ss_dssp             EEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC--------------------
T ss_pred             eEEEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEc--------------------
Confidence            9999999666655555443 4799999999999999999999999999999999999965                    


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC---ccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE---HNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                             .++.+||+|||.+......   .....||+.|+|||.+.+. .++.++|||||||++|||++|+.||.+.+..
T Consensus       135 -------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~  207 (286)
T d1ob3a_         135 -------REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA  207 (286)
T ss_dssp             -------TTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             -------CCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHH
Confidence                   4556777888877654332   2335789999999999865 4689999999999999999999999999988


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +.+..+....+.++...+...........     ......               ........+..++.+.|||.+||++
T Consensus       208 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---------------~~~~~~~~~~~s~~~~dli~~~L~~  267 (286)
T d1ob3a_         208 DQLMRIFRILGTPNSKNWPNVTELPKYDP-----NFTVYE---------------PLPWESFLKGLDESGIDLLSKMLKL  267 (286)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGSTTCCT-----TCCCCC---------------CCCGGGTCCSCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHHhhCCCChhhccchhhhhhccc-----cccccc---------------CcchhhhcccCCHHHHHHHHHHccC
Confidence            88888888888776544332221111000     000000               0001123356678899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCC
Q 047395          408 DPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       408 dP~~R~ta~elL~hp~f~~  426 (432)
                      ||++||||+|+|+||||++
T Consensus       268 dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         268 DPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             STTTSCCHHHHHTSGGGGC
T ss_pred             ChhHCcCHHHHhcCcccCc
Confidence            9999999999999999975

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-55  Score=419.02  Aligned_cols=278  Identities=28%  Similarity=0.503  Sum_probs=222.1

Q ss_pred             ceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc------cCC
Q 047395           96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD------YRN  169 (432)
Q Consensus        96 ~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~------~~~  169 (432)
                      +|+.+++||+|+||+||+|++..+|+.||||+++....   ...+|+.+++.++|     +||++++++|.      +..
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h-----~niv~~~~~~~~~~~~~~~~   92 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDH-----CNIVRLRYFFYSSGEKKDEV   92 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHCCC-----TTBCCEEEEEEEC--CCSCC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhcCC-----CCCCcEEEEEEecCccCCce
Confidence            69999999999999999999999999999999975432   34579999998876     99999999874      334


Q ss_pred             eEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          170 HICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       170 ~~~lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      ++|+|||||++++.+.+..  .....+++..++.++.||+.||+|||++||+||||||+|||++.+              
T Consensus        93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~--------------  158 (350)
T d1q5ka_          93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD--------------  158 (350)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTT--------------
T ss_pred             EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecC--------------
Confidence            6899999997766665542  223469999999999999999999999999999999999997542              


Q ss_pred             CCCccccccCCCCCCeEEeecCCccccc--CCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHHHhCCCCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTH  324 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~elltg~~pf~~~  324 (432)
                                  ...+||+|||++....  ......+||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus       159 ------------~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~  226 (350)
T d1q5ka_         159 ------------TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD  226 (350)
T ss_dssp             ------------TCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred             ------------CCceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCC
Confidence                        2467888888876543  233456899999999998764 6899999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHc
Q 047395          325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGL  404 (432)
Q Consensus       325 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  404 (432)
                      +..+.+..+.+.+|.++...+..........      .++....              ...........++.+.+||.+|
T Consensus       227 ~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~------~~~~~~~--------------~~~~~~~~~~~s~~~~dLl~~m  286 (350)
T d1q5ka_         227 SGVDQLVEIIKVLGTPTREQIREMNPNYTEF------KFPQIKA--------------HPWTKVFRPRTPPEAIALCSRL  286 (350)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHHHHCC---CC------CCCCCCC--------------CCGGGTSCTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCChHHhhhhhccchhhc------ccccccc--------------CchhhhcccCCCHHHHHHHHHH
Confidence            9999999999999998887776554322111      1111000              0011112345677899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 047395          405 LRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       405 L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      |++||++||||.|+|+||||++.
T Consensus       287 L~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         287 LEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             SCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             ccCChhHCcCHHHHhcCHhhccc
Confidence            99999999999999999999763

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-55  Score=408.50  Aligned_cols=255  Identities=20%  Similarity=0.313  Sum_probs=209.2

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      -.++|++.++||+|+||+||+|++..+++.||||+++......+.+.+|+.++..++|     ||||++++++.+++.++
T Consensus        15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~H-----pnIv~~~~~~~~~~~~~   89 (287)
T d1opja_          15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQLLGVCTREPPFY   89 (287)
T ss_dssp             CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCC-----TTBCCEEEEECSSSSCE
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCC-----CCEecCCccEeeCCeeE
Confidence            3578999999999999999999999999999999998766667789999999999987     99999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||| +|+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.                   
T Consensus        90 iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~-------------------  150 (287)
T d1opja_          90 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE-------------------  150 (287)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG-------------------
T ss_pred             EEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECC-------------------
Confidence            999999 899999998876667999999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCc----cccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCCCCcH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEH----NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL  327 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~~~~~  327 (432)
                              ++.+||+|||+|+......    ....||+.|+|||++.+..++.++|||||||++|||++|..||....+.
T Consensus       151 --------~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~  222 (287)
T d1opja_         151 --------NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL  222 (287)
T ss_dssp             --------GGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             --------CCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH
Confidence                    4566777777766543322    2235789999999999999999999999999999999976665444433


Q ss_pred             -HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          328 -EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       328 -~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                       .....+.....                                                ...++.+++.+.+||.+||+
T Consensus       223 ~~~~~~i~~~~~------------------------------------------------~~~~~~~~~~l~~li~~cl~  254 (287)
T d1opja_         223 SQVYELLEKDYR------------------------------------------------MERPEGCPEKVYELMRACWQ  254 (287)
T ss_dssp             HHHHHHHHTTCC------------------------------------------------CCCCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCC------------------------------------------------CCCCccchHHHHHHHHHHcC
Confidence             33222211100                                                01123466779999999999


Q ss_pred             cCCCCCCCHHHHhc--CCCCCCC
Q 047395          407 YDPSSRLTAHDALK--HPFFTRD  427 (432)
Q Consensus       407 ~dP~~R~ta~elL~--hp~f~~~  427 (432)
                      .||++|||++|+++  ..++++.
T Consensus       255 ~dP~~Rps~~ei~~~L~~~~~~~  277 (287)
T d1opja_         255 WNPSDRPSFAEIHQAFETMFQES  277 (287)
T ss_dssp             SSGGGSCCHHHHHHHHHHTTSSS
T ss_pred             CCHhHCcCHHHHHHHHHHHHHhC
Confidence            99999999999986  3455443

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-54  Score=413.47  Aligned_cols=283  Identities=28%  Similarity=0.510  Sum_probs=218.0

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC--
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR--  168 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~--  168 (432)
                      ++++|+++++||+|+||+||+|+++.+|+.||||+++..  ....+.+++|+.+|+.++|     +||+++++++...  
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~h-----p~iv~~~~~~~~~~~   80 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH-----ENIIGINDIIRAPTI   80 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCC-----TTBCCCCEEECCSST
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCC-----CCCCcEEEEEeeccc
Confidence            457899999999999999999999999999999999743  3345678899999999987     9999999987643  


Q ss_pred             ---CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          169 ---NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       169 ---~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                         ..+|+++++++++|.+++...   .+++..++.++.||+.||+|||++|||||||||+|||++.             
T Consensus        81 ~~~~~~~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~-------------  144 (345)
T d1pmea_          81 EQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-------------  144 (345)
T ss_dssp             TTCCCEEEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-------------
T ss_pred             cccceEEEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECC-------------
Confidence               357777777799999999875   4999999999999999999999999999999999999654             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC------CccccccCCCcchhHHHhC-CCCCccchHHHHHHHHHHHHhCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ------EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGE  318 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~sDiwSlGvil~elltg~  318 (432)
                                    .+.+||+|||++.....      .....+||+.|+|||++.. ..++.++||||+||++|+|++|+
T Consensus       145 --------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~  210 (345)
T d1pmea_         145 --------------TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR  210 (345)
T ss_dssp             --------------TCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSS
T ss_pred             --------------CCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCC
Confidence                          44566666666654322      1234579999999999855 45789999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||.+.+..+....+......+..............-..   ...+...               ...........++.++
T Consensus       211 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---------------~~~~~~~~~~~s~~~~  272 (345)
T d1pmea_         211 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL---LSLPHKN---------------KVPWNRLFPNADSKAL  272 (345)
T ss_dssp             CSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHH---HTSCCCC---------------CCCHHHHCTTSCHHHH
T ss_pred             CCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhccc---ccCCccC---------------CCCHHHhCCCCCHHHH
Confidence            999999888888888888877766543332211110000   0000000               0000112345677899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCc
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY  428 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~hp~f~~~~  428 (432)
                      +||.+||+.||++||||+|+|+||||++.+
T Consensus       273 ~li~~~L~~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         273 DLLDKMLTFNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHccCChhHCcCHHHHhcCHhhccCC
Confidence            999999999999999999999999998654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-55  Score=411.61  Aligned_cols=286  Identities=28%  Similarity=0.496  Sum_probs=215.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc---
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY---  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~---  167 (432)
                      .++|+++++||+|+||+||+|++..+|+.||||++....   .....+.+|+.+|+.++|     +||+++++++..   
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h-----~nii~~~~~~~~~~~   83 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH-----ENVVNLIEICRTKAS   83 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCC-----TTBCCEEEEEEC---
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcC-----CCccceEeeeecccc
Confidence            479999999999999999999999999999999986432   334567899999999987     999999988754   


Q ss_pred             -----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          168 -----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       168 -----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                           .+++|+||||+++.+...+.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++        
T Consensus        84 ~~~~~~~~~~iv~e~~~~~~~~~~~~~~-~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~--------  154 (318)
T d3blha1          84 PYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--------  154 (318)
T ss_dssp             -------CEEEEEECCCEEHHHHHTCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS--------
T ss_pred             cccccCceEEEEEeccCCCccchhhhcc-cccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCC--------
Confidence                 45789999999666666554433 4799999999999999999999999999999999999976554        


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCccccc-------CCccccccCCCcchhHHHhCC-CCCccchHHHHHHHHHHH
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH-------QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIEL  314 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDiwSlGvil~el  314 (432)
                                         .+||+|||++....       ......+||+.|+|||++.+. .++.++|||||||++|||
T Consensus       155 -------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el  215 (318)
T d3blha1         155 -------------------VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM  215 (318)
T ss_dssp             -------------------CEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             -------------------cEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeH
Confidence                               45555555554322       122335799999999999876 689999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccch
Q 047395          315 CSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA  394 (432)
Q Consensus       315 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (432)
                      ++|+.||.+.++.+....+.+..+.++................    ...  ......         .....  .....+
T Consensus       216 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~---------~~~~~--~~~~~~  278 (318)
T d3blha1         216 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKL----ELV--KGQKRK---------VKDRL--KAYVRD  278 (318)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-----------CC--SSCCBC---------HHHHH--HHHHCC
T ss_pred             hhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhh----ccc--cccccc---------chhhh--ccccCC
Confidence            9999999999999999999999888776543332221110000    000  000000         00000  011235


Q ss_pred             HHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCcc
Q 047395          395 GYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY  429 (432)
Q Consensus       395 ~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~~~  429 (432)
                      +.++|||.+||++||++||||+|+|+||||+.+..
T Consensus       279 ~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p~  313 (318)
T d3blha1         279 PYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM  313 (318)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSSC
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHHcChhhccCCC
Confidence            66889999999999999999999999999997644

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-55  Score=418.20  Aligned_cols=282  Identities=27%  Similarity=0.496  Sum_probs=225.5

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--  167 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--  167 (432)
                      +.+||+++++||+|+||+||+|++..+|+.||||+++..   ....+.+.+|+.+|+.++|     +|++++++++..  
T Consensus        16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h-----~~iv~~~~~~~~~~   90 (348)
T d2gfsa1          16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH-----ENVIGLLDVFTPAR   90 (348)
T ss_dssp             EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCC-----TTBCCCSEEECSCS
T ss_pred             CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCC-----CCeeeEEEEEeecc
Confidence            468999999999999999999999999999999999743   2334567899999999977     999999998753  


Q ss_pred             ----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccc
Q 047395          168 ----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV  243 (432)
Q Consensus       168 ----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~  243 (432)
                          ...++++++++|++|.+++..+   .+++..++.++.||+.||+|||++||+||||||+|||++            
T Consensus        91 ~~~~~~~~~i~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~------------  155 (348)
T d2gfsa1          91 SLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN------------  155 (348)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC------------
T ss_pred             ccccCceEEEEEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccc------------
Confidence                2345665555599999999654   599999999999999999999999999999999999964            


Q ss_pred             ccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCCCCC
Q 047395          244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQ  322 (432)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~pf~  322 (432)
                                     .++.+|++|||.+...........||+.|+|||++.+.. ++.++|||||||++|+|++|.+||.
T Consensus       156 ---------------~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~  220 (348)
T d2gfsa1         156 ---------------EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP  220 (348)
T ss_dssp             ---------------TTCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ---------------ccccccccccchhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCC
Confidence                           455678888888877766667778999999999988765 6889999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.+.......+....+..+......................+..                  .........++.++|||.
T Consensus       221 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~s~~~~dli~  282 (348)
T d2gfsa1         221 GTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM------------------NFANVFIGANPLAVDLLE  282 (348)
T ss_dssp             CSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCC------------------CHHHHSTTCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCc------------------chhhhcCCCCHHHHHHHH
Confidence            99999999999999988887766554433322221111111100                  001123456788999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCC
Q 047395          403 GLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      +||+.||++||||+|+|+||||++.
T Consensus       283 ~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         283 KMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHCcCChhhCcCHHHHhcCHhhCCC
Confidence            9999999999999999999999864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-55  Score=399.14  Aligned_cols=245  Identities=24%  Similarity=0.351  Sum_probs=198.0

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      ++|++++.||+|+||+||+|++. +++.||||+++......+.+.+|++++..++|     |||+++++++..++.+++|
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~H-----pnIv~~~g~~~~~~~~~lv   78 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKLVQLYGVCLEQAPICLV   78 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCC-----TTBCCEEEEECSSSSCEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCC-----CCcccccceeccCCceEEE
Confidence            57999999999999999999976 56789999998766667789999999999987     9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+ +|+|.+++.... ..+++..+..++.||+.||+|||+++|+||||||+|||++.                     
T Consensus        79 ~E~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~---------------------  136 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE---------------------  136 (263)
T ss_dssp             EECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECG---------------------
T ss_pred             EEecCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecC---------------------
Confidence            9999 999999988654 46899999999999999999999999999999999999655                     


Q ss_pred             cccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE  328 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~  328 (432)
                            ++.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||+| |.+||...+..+
T Consensus       137 ------~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~  210 (263)
T d1sm2a_         137 ------NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE  210 (263)
T ss_dssp             ------GGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH
T ss_pred             ------CCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH
Confidence                  445666666666543222    123568999999999999999999999999999999999 577777666655


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.......                                                .+..+++++.+||.+||+.|
T Consensus       211 ~~~~i~~~~~~~------------------------------------------------~p~~~~~~l~~li~~cl~~~  242 (263)
T d1sm2a_         211 VVEDISTGFRLY------------------------------------------------KPRLASTHVYQIMNHCWKER  242 (263)
T ss_dssp             HHHHHHHTCCCC------------------------------------------------CCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHhcCCCC------------------------------------------------CccccCHHHHHHHHHHccCC
Confidence            555443321110                                                11234567899999999999


Q ss_pred             CCCCCCHHHHhcC
Q 047395          409 PSSRLTAHDALKH  421 (432)
Q Consensus       409 P~~R~ta~elL~h  421 (432)
                      |++|||++|+++|
T Consensus       243 p~~Rps~~~il~~  255 (263)
T d1sm2a_         243 PEDRPAFSRLLRQ  255 (263)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999975

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-55  Score=404.97  Aligned_cols=252  Identities=24%  Similarity=0.343  Sum_probs=205.2

Q ss_pred             ecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ..++|++.++||+|+||+||+|+++ +++.||||+++......+.+.+|+.++..++|     ||||++++++.. +.+|
T Consensus        11 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~H-----pnIv~~~g~~~~-~~~~   83 (272)
T d1qpca_          11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----QRLVRLYAVVTQ-EPIY   83 (272)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCC-----TTBCCEEEEECS-SSCE
T ss_pred             CHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCC-----CCEeEEEeeecc-CCeE
Confidence            3578999999999999999999975 57889999998766667789999999999987     999999998765 5678


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +|+|.+++......++++..+..++.||+.||.|||++||+||||||+|||++.                   
T Consensus        84 iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~-------------------  144 (272)
T d1qpca_          84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD-------------------  144 (272)
T ss_dssp             EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-------------------
T ss_pred             EEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeec-------------------
Confidence            999999 999999886554346999999999999999999999999999999999999654                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhC-CCCCCCCCc
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG-EALFQTHEN  326 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg-~~pf~~~~~  326 (432)
                              ++.+||+|||+|+.....    .....||+.|+|||++.+..++.++|||||||++|||+|| .+||...+.
T Consensus       145 --------~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~  216 (272)
T d1qpca_         145 --------TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN  216 (272)
T ss_dssp             --------TSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH
T ss_pred             --------ccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH
Confidence                    456677777776654322    2335689999999999998999999999999999999995 555665555


Q ss_pred             HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccc
Q 047395          327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLR  406 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  406 (432)
                      .+....+.....+                                                ..++.+++.+.+||.+||+
T Consensus       217 ~~~~~~i~~~~~~------------------------------------------------~~p~~~~~~l~~li~~cl~  248 (272)
T d1qpca_         217 PEVIQNLERGYRM------------------------------------------------VRPDNCPEELYQLMRLCWK  248 (272)
T ss_dssp             HHHHHHHHTTCCC------------------------------------------------CCCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCC------------------------------------------------CCcccChHHHHHHHHHHcC
Confidence            5544443221110                                                0123456778999999999


Q ss_pred             cCCCCCCCHHHHhc--CCCCCC
Q 047395          407 YDPSSRLTAHDALK--HPFFTR  426 (432)
Q Consensus       407 ~dP~~R~ta~elL~--hp~f~~  426 (432)
                      .||++|||++|+++  |+||+.
T Consensus       249 ~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         249 ERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHhhhhhhc
Confidence            99999999999998  788854

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.9e-54  Score=409.35  Aligned_cols=287  Identities=23%  Similarity=0.463  Sum_probs=215.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc--CCeE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY--RNHI  171 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~--~~~~  171 (432)
                      .++|+++++||+|+||+||+|++..+|+.||||+++...  ...+.+|+.+|..+.+    |+||+++++++..  ...+
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~Ei~il~~l~~----hpnIv~~~~~~~~~~~~~~  107 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRG----GPNIITLADIVKDPVSRTP  107 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC--HHHHHHHHHHHHHHTT----STTBCCEEEEEECTTTCSE
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH--HHHHHHHHHHHHhccC----CCCCcEEEEEEEecCCCce
Confidence            368999999999999999999999999999999997533  4567899999999963    3999999999874  4679


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      ++||||| +++|.++.     +.+++..++.++.||+.||+|||++||+||||||+||||+.+                 
T Consensus       108 ~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~-----------------  165 (328)
T d3bqca1         108 ALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-----------------  165 (328)
T ss_dssp             EEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT-----------------
T ss_pred             eEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCC-----------------
Confidence            9999999 78886653     359999999999999999999999999999999999998643                 


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC--CccccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCCCCCCCC-c
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ--EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHE-N  326 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~pf~~~~-~  326 (432)
                               +..+||+|||+|.....  .....+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.... .
T Consensus       166 ---------~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~  236 (328)
T d3bqca1         166 ---------HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  236 (328)
T ss_dssp             ---------TTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             ---------CCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchh
Confidence                     23577888887765433  344567899999999998764 7999999999999999999999997654 4


Q ss_pred             HHHHHHHHHHhCCCCHH-HHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          327 LEHLAMMERVLGPIPQH-MLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       327 ~~~~~~i~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      .++...+...++..... +...................+             ...............+++++.|||.+||
T Consensus       237 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~s~~~~dli~~mL  303 (328)
T d3bqca1         237 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHS-------------RKRWERFVHSENQHLVSPEALDFLDKLL  303 (328)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCC-------------CCCGGGGCCTTTGGGCCHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHCCchhhhhhhhcccccCcccchhccccc-------------ccchhhcccccccccCCHHHHHHHHHHc
Confidence            55666666666643222 111111110000000000000             0000000111223456788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCccC
Q 047395          406 RYDPSSRLTAHDALKHPFFTRDYYR  430 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~~~~~  430 (432)
                      ++||++||||+|+|+||||+...++
T Consensus       304 ~~dP~~R~ta~e~L~Hp~F~~v~~~  328 (328)
T d3bqca1         304 RYDHQSRLTAREAMEHPYFYTVVKD  328 (328)
T ss_dssp             CSSGGGSCCHHHHHTSGGGTTSCCC
T ss_pred             cCChhHCcCHHHHhcCcccCCCCCC
Confidence            9999999999999999999986553

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.6e-55  Score=402.48  Aligned_cols=253  Identities=23%  Similarity=0.322  Sum_probs=199.3

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||+++..    ......+.+|+.+++.++|     |||+++++++..
T Consensus         4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~h-----pniv~~~~~~~~   78 (277)
T d1o6ya_           4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH-----PAIVAVYDTGEA   78 (277)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEEEE
T ss_pred             CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCC-----CCCCcccceeee
Confidence            4678999999999999999999999999999999999643    2334568889999988877     999999999875


Q ss_pred             C----CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcc
Q 047395          168 R----NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYK  242 (432)
Q Consensus       168 ~----~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~  242 (432)
                      .    ..+|+||||| |++|.+++...+  .+++.+++.++.||+.||+|||++||+||||||+|||++.++.       
T Consensus        79 ~~~~~~~~~lvmE~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~-------  149 (277)
T d1o6ya_          79 ETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA-------  149 (277)
T ss_dssp             ECSSSEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSC-------
T ss_pred             ccCCCceEEEEEECCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCcccc-------
Confidence            4    3589999999 899999998775  6999999999999999999999999999999999999776554       


Q ss_pred             cccCCCCCccccccCCCCCCeEEeecCCccccc------CCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh
Q 047395          243 VTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH------QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS  316 (432)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt  316 (432)
                                          ++|+|||.+....      ......+||+.|+|||++.+..++.++|||||||++|||+|
T Consensus       150 --------------------~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyellt  209 (277)
T d1o6ya_         150 --------------------VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT  209 (277)
T ss_dssp             --------------------EEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             --------------------ceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHh
Confidence                                4555555443321      12234579999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHH
Q 047395          317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY  396 (432)
Q Consensus       317 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (432)
                      |.+||.+.+..+....+......++.                                             ...+.+++.
T Consensus       210 G~~Pf~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~s~~  244 (277)
T d1o6ya_         210 GEPPFTGDSPVSVAYQHVREDPIPPS---------------------------------------------ARHEGLSAD  244 (277)
T ss_dssp             SSCSCCCSSHHHHHHHHHHCCCCCGG---------------------------------------------GTSSSCCHH
T ss_pred             CCCCCCCcCHHHHHHHHHhcCCCCCc---------------------------------------------hhccCCCHH
Confidence            99999988776665544332221111                                             112456778


Q ss_pred             HHHHHHHccccCCCCCC-CHHHHhcCCCC
Q 047395          397 LIDLLQGLLRYDPSSRL-TAHDALKHPFF  424 (432)
Q Consensus       397 l~~li~~~L~~dP~~R~-ta~elL~hp~f  424 (432)
                      +.+||.+||+.||++|| |++++ .|+|.
T Consensus       245 l~~li~~~L~~dp~~R~~sa~~l-~~~l~  272 (277)
T d1o6ya_         245 LDAVVLKALAKNPENRYQTAAEM-RADLV  272 (277)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHH-HHHHH
T ss_pred             HHHHHHHHccCCHhHCHhHHHHH-HHHHH
Confidence            99999999999999999 56655 45554

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-54  Score=401.42  Aligned_cols=278  Identities=30%  Similarity=0.459  Sum_probs=218.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      ++|+++++||+|+||+||+|++..+++.||||+++...   .....+.+|+.+++.++|     +||+++++++......
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h-----~niv~~~~~~~~~~~~   76 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-----KNIVRLHDVLHSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCC-----TTBCCEEEEEECSSEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCc-----CCEEeeccccccccce
Confidence            58999999999999999999999999999999996432   345678899999988876     9999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      ++|+|++ +++|..++...  ..+++..++.++.|++.||+|||++||+||||||+|||++.                  
T Consensus        77 ~iv~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~------------------  136 (292)
T d1unla_          77 TLVFEFCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR------------------  136 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT------------------
T ss_pred             eEEeeeccccccccccccc--cccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccccc------------------
Confidence            9999999 77777776654  37999999999999999999999999999999999999654                  


Q ss_pred             ccccccCCCCCCeEEeecCCcccccCCc---cccccCCCcchhHHHhCCC-CCccchHHHHHHHHHHHHhCCCCC-CCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQEH---NYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALF-QTHE  325 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~sDiwSlGvil~elltg~~pf-~~~~  325 (432)
                               ...+||+|||.+.......   ....+++.|+|||++.+.. ++.++|||||||++|||++|..|| .+.+
T Consensus       137 ---------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~  207 (292)
T d1unla_         137 ---------NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND  207 (292)
T ss_dssp             ---------TCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS
T ss_pred             ---------CCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCC
Confidence                     4567788888776544322   2346788999999998765 689999999999999999999885 5556


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcc
Q 047395          326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLL  405 (432)
Q Consensus       326 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  405 (432)
                      ..+....+....+.++...+.........    ......                .............++.+.+||.+||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----------------~~~~~~~~~~~~~s~~~~dll~~mL  267 (292)
T d1unla_         208 VDDQLKRIFRLLGTPTEEQWPSMTKLPDY----KPYPMY----------------PATTSLVNVVPKLNATGRDLLQNLL  267 (292)
T ss_dssp             HHHHHHHHHHHHCCCCTTTCTTGGGSTTC----CCCCCC----------------CTTCCCTTTSTTCCHHHHHHHHHHS
T ss_pred             HHHHHHHHHhhcCCCChhhhhhhhhcccc----cccccc----------------cccchhhhccccCCHHHHHHHHHHc
Confidence            66777777777777664332222111110    000000                0001111223456778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCC
Q 047395          406 RYDPSSRLTAHDALKHPFFTR  426 (432)
Q Consensus       406 ~~dP~~R~ta~elL~hp~f~~  426 (432)
                      ++||.+||||+|+|+||||++
T Consensus       268 ~~dP~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         268 KCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             CSSGGGSCCHHHHTTSGGGSS
T ss_pred             cCChhHCcCHHHHhcChhhcC
Confidence            999999999999999999975

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-54  Score=394.38  Aligned_cols=245  Identities=21%  Similarity=0.325  Sum_probs=206.8

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEE
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIV  174 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv  174 (432)
                      ++|+++++||+|+||+||+|+++ +++.||||+++......+.+.+|+.++..++|     |||+++++++.+++.+++|
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~H-----pnIv~~~g~~~~~~~~~iv   77 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH-----EKLVQLYGVCTKQRPIFII   77 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCC-----TTBCCEEEEECCSSSEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCC-----CceeeEEEEEeeCCceEEE
Confidence            57899999999999999999975 67899999998776677889999999999977     9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCccc
Q 047395          175 FEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY  253 (432)
Q Consensus       175 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~  253 (432)
                      |||+ +|+|.+++.... ..+++..+..++.||++||+|||++||+||||||+|||++.                     
T Consensus        78 ~Ey~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~---------------------  135 (258)
T d1k2pa_          78 TEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVND---------------------  135 (258)
T ss_dssp             EECCTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECT---------------------
T ss_pred             EEccCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcC---------------------
Confidence            9999 899999977654 46899999999999999999999999999999999999654                     


Q ss_pred             cccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHH
Q 047395          254 YKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE  328 (432)
Q Consensus       254 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~  328 (432)
                            ++.+||+|||++......    .....||+.|+|||++.+..++.++|||||||++|||+| |+.||.+.+..+
T Consensus       136 ------~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~  209 (258)
T d1k2pa_         136 ------QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE  209 (258)
T ss_dssp             ------TCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH
T ss_pred             ------CCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH
Confidence                  455667777766543322    123468999999999999999999999999999999998 899999888777


Q ss_pred             HHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccC
Q 047395          329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYD  408 (432)
Q Consensus       329 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  408 (432)
                      ....+.+.....                                                .+...++.+.+||.+||+.|
T Consensus       210 ~~~~i~~~~~~~------------------------------------------------~p~~~~~~l~~li~~cl~~d  241 (258)
T d1k2pa_         210 TAEHIAQGLRLY------------------------------------------------RPHLASEKVYTIMYSCWHEK  241 (258)
T ss_dssp             HHHHHHTTCCCC------------------------------------------------CCTTCCHHHHHHHHHTTCSS
T ss_pred             HHHHHHhCCCCC------------------------------------------------CcccccHHHHHHHHHHccCC
Confidence            665554321111                                                11234566899999999999


Q ss_pred             CCCCCCHHHHhcC
Q 047395          409 PSSRLTAHDALKH  421 (432)
Q Consensus       409 P~~R~ta~elL~h  421 (432)
                      |++|||++++++|
T Consensus       242 P~~RPt~~eil~~  254 (258)
T d1k2pa_         242 ADERPTFKILLSN  254 (258)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999986

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-54  Score=406.94  Aligned_cols=249  Identities=18%  Similarity=0.274  Sum_probs=199.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCc-----EEEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeeccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~-----~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~  165 (432)
                      .++|++.++||+|+||+||+|++..+++     .||+|++...  ......+.+|+.++..+ +|     ||||++++++
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~H-----pnIv~l~~~~  110 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH-----ENIVNLLGAC  110 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCC-----TTBCCEEEEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCC-----CcEeEEEEEE
Confidence            4689999999999999999999876554     6999998643  33455788999999988 55     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeccC
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNNY---------------------RPFPVDLVREIGRQLLECVAFMHDLRLIHTDL  223 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  223 (432)
                      ...+.+|+||||| +|+|.++|.....                     ..+++..++.++.||+.||+|||++|||||||
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDl  190 (325)
T d1rjba_         111 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  190 (325)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             eeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence            9999999999999 9999999986531                     24899999999999999999999999999999


Q ss_pred             CCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCc-----cccccCCCcchhHHHhCCCC
Q 047395          224 KPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH-----NYIVSTRHYRAPEVILGLGW  298 (432)
Q Consensus       224 kp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~  298 (432)
                      ||+|||++.++                           .+||+|||+|+......     ....||+.|||||++.+..+
T Consensus       191 Kp~Nill~~~~---------------------------~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~  243 (325)
T d1rjba_         191 AARNVLVTHGK---------------------------VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY  243 (325)
T ss_dssp             SGGGEEEETTT---------------------------EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred             chhccccccCC---------------------------eEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCC
Confidence            99999976554                           45556666554432221     23467999999999999999


Q ss_pred             CccchHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhh
Q 047395          299 SYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL  377 (432)
Q Consensus       299 ~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (432)
                      +.++|||||||++|||+| |..||.+.+....+..+......+                                     
T Consensus       244 ~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~-------------------------------------  286 (325)
T d1rjba_         244 TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKM-------------------------------------  286 (325)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCC-------------------------------------
T ss_pred             CcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC-------------------------------------
Confidence            999999999999999998 899998876655444432211111                                     


Q ss_pred             cCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          378 KLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                                ..+..+++++.+||.+||+.||++|||++||++|
T Consensus       287 ----------~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         287 ----------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                      0123456779999999999999999999999975

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-54  Score=398.02  Aligned_cols=248  Identities=22%  Similarity=0.332  Sum_probs=196.2

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeech---hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCe
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH  170 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~  170 (432)
                      .++|++.+.||+|+||+||+|+..   ..||||+++..   ....+.+.+|+.++..++|     |||+++++++.. +.
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~H-----pnIv~~~~~~~~-~~   77 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH-----VNILLFMGYSTA-PQ   77 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCC-----TTBCCEEEEECS-SS
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC-----CCEeeeeEEEec-cE
Confidence            578999999999999999999754   35999998632   3345678899999998877     999999998754 56


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCC
Q 047395          171 ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT  249 (432)
Q Consensus       171 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~  249 (432)
                      +++||||| +|+|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.+                
T Consensus        78 ~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~----------------  140 (276)
T d1uwha_          78 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED----------------  140 (276)
T ss_dssp             CEEEEECCCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT----------------
T ss_pred             EEEEEecCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCC----------------
Confidence            89999999 899999998654 469999999999999999999999999999999999997654                


Q ss_pred             CccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCC---CCCccchHHHHHHHHHHHHhCCCCC
Q 047395          250 DVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       250 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~---~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                                 +.+||+|||+|+....     ......||+.|||||++.+.   .|+.++|||||||++|||+||+.||
T Consensus       141 -----------~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf  209 (276)
T d1uwha_         141 -----------LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY  209 (276)
T ss_dssp             -----------SSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -----------CCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCC
Confidence                       4566666666654322     12345799999999999753   4889999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+....+..+.......|.                                           .......+++.+.+||
T Consensus       210 ~~~~~~~~~~~~~~~~~~~p~-------------------------------------------~~~~~~~~~~~l~~li  246 (276)
T d1uwha_         210 SNINNRDQIIFMVGRGYLSPD-------------------------------------------LSKVRSNCPKAMKRLM  246 (276)
T ss_dssp             TTCCCHHHHHHHHHHTSCCCC-------------------------------------------GGGSCTTCCHHHHHHH
T ss_pred             CCCChHHHHHHHHhcCCCCCc-------------------------------------------chhccccchHHHHHHH
Confidence            987766554443332211110                                           0111235677899999


Q ss_pred             HHccccCCCCCCCHHHHhcC
Q 047395          402 QGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~h  421 (432)
                      .+||+.||++|||++|++++
T Consensus       247 ~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         247 AECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999975

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.6e-54  Score=400.18  Aligned_cols=247  Identities=24%  Similarity=0.331  Sum_probs=194.9

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCc---EEEEEEeec--hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~---~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|++.+.||+|+||+||+|+++.+++   .||||.+..  .....+.+.+|++++..++|     ||||++++++...
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H-----pnIv~l~g~~~~~   99 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH-----PNVIHLEGVVTKS   99 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC-----TTBCCEEEEECSS
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC-----CCCccEEEEEeeC
Confidence            4679999999999999999999987765   588998764  23445678999999999877     9999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||| +|+|.+++.... ..+++.++..++.||+.||.|||++||+||||||+|||++.+              
T Consensus       100 ~~~~iv~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~--------------  164 (299)
T d1jpaa_         100 TPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSN--------------  164 (299)
T ss_dssp             SSCEEEEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--------------
T ss_pred             CEEEEEEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCC--------------
Confidence            9999999999 999999988754 469999999999999999999999999999999999996654              


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC--------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GE  318 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~  318 (432)
                                   +.+||+|||+++.....        .....||+.|+|||++.+..++.++|||||||++|||+| |.
T Consensus       165 -------------~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~  231 (299)
T d1jpaa_         165 -------------LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE  231 (299)
T ss_dssp             -------------CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             -------------CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCC
Confidence                         45666666665543221        112357899999999999999999999999999999998 89


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       319 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .||.+.+..+....+.......                                                .+..+++.+.
T Consensus       232 ~Pf~~~~~~~~~~~i~~~~~~~------------------------------------------------~~~~~~~~l~  263 (299)
T d1jpaa_         232 RPYWDMTNQDVINAIEQDYRLP------------------------------------------------PPMDCPSALH  263 (299)
T ss_dssp             CTTTTCCHHHHHHHHHTTCCCC------------------------------------------------CCTTCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHcCCCCC------------------------------------------------CCccchHHHH
Confidence            9999887766655543321110                                                1124566789


Q ss_pred             HHHHHccccCCCCCCCHHHHhcC
Q 047395          399 DLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      +||.+||+.||++|||+.|++++
T Consensus       264 ~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         264 QLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999988753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-54  Score=396.34  Aligned_cols=248  Identities=24%  Similarity=0.329  Sum_probs=199.7

Q ss_pred             CceEEEe-eeecccceEEEEEEecCC--CcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCC
Q 047395           95 SRYKILR-KIGEGTFGQVLDCLDRET--GETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        95 ~~y~i~~-~lg~G~~g~V~~a~~~~~--~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ++|.+.+ +||+|+||+||+|.++.+  +..||||+++..  ....+.+.+|++++..++|     ||||++++++.. +
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~l~g~~~~-~   81 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN-----PYIVRLIGVCQA-E   81 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCC-----TTBCCEEEEEES-S
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCC-----CCEeeEeeeecc-C
Confidence            5688888 499999999999987643  457999999643  3445678999999999977     999999999875 4


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP  248 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~  248 (432)
                      .+|+||||| +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.             
T Consensus        82 ~~~lvmE~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~-------------  147 (285)
T d1u59a_          82 ALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY-------------  147 (285)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTE-------------
T ss_pred             eEEEEEEeCCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCc-------------
Confidence            589999999 899999986653 46999999999999999999999999999999999999776554             


Q ss_pred             CCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 047395          249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALF  321 (432)
Q Consensus       249 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf  321 (432)
                                    +||+|||+++.....      .....||+.|+|||++.+..++.++|||||||++|||+| |..||
T Consensus       148 --------------~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf  213 (285)
T d1u59a_         148 --------------AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY  213 (285)
T ss_dssp             --------------EEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             --------------eeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCC
Confidence                          555555555433221      223468999999999999999999999999999999998 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+..+....+.+...+                                                ..++.+++++.+||
T Consensus       214 ~~~~~~~~~~~i~~~~~~------------------------------------------------~~p~~~~~~l~~li  245 (285)
T d1u59a_         214 KKMKGPEVMAFIEQGKRM------------------------------------------------ECPPECPPELYALM  245 (285)
T ss_dssp             TTCCTHHHHHHHHTTCCC------------------------------------------------CCCTTCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCCC------------------------------------------------CCCCcCCHHHHHHH
Confidence            988776665554332110                                                01235667799999


Q ss_pred             HHccccCCCCCCCHHHH---hcCCCC
Q 047395          402 QGLLRYDPSSRLTAHDA---LKHPFF  424 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~el---L~hp~f  424 (432)
                      .+||+.||++|||+.++   |+|+|+
T Consensus       246 ~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         246 SDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             HHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            99999999999999888   567776

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.9e-52  Score=401.32  Aligned_cols=314  Identities=30%  Similarity=0.500  Sum_probs=241.4

Q ss_pred             CceeecCceec-CceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCC------CCC
Q 047395           84 HYLFALGENLT-SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR------SGS  156 (432)
Q Consensus        84 ~~~~~~~~~~~-~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~------~~~  156 (432)
                      +|++.+|+.+. +||+++++||+|+||+||+|++..+|+.||||+++......+...+|+.+++.+.|...      .|+
T Consensus         1 ~~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~   80 (362)
T d1q8ya_           1 YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN   80 (362)
T ss_dssp             CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred             CCCCCCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcC
Confidence            46788899987 47999999999999999999999999999999998776667788899999999987432      257


Q ss_pred             ceeEeeccccc--CCeEEEEEccC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeccCCCCcEEee
Q 047395          157 RCVQIRNWFDY--RNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILFV  231 (432)
Q Consensus       157 ~iv~~~~~~~~--~~~~~lv~e~~--~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~  231 (432)
                      ||+++++++..  ....+++|+++  +++............+++..++.++.||+.||+|||+ +||+||||||+|||++
T Consensus        81 ~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~  160 (362)
T d1q8ya_          81 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME  160 (362)
T ss_dssp             TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred             ceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeee
Confidence            89999988754  35566666655  5566666666655679999999999999999999997 8999999999999987


Q ss_pred             cCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHH
Q 047395          232 SPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL  311 (432)
Q Consensus       232 ~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil  311 (432)
                      .++.                     ......++++|||.+..........+||+.|+|||++.+..++.++||||+||++
T Consensus       161 ~~~~---------------------~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  219 (362)
T d1q8ya_         161 IVDS---------------------PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLI  219 (362)
T ss_dssp             EEET---------------------TTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHH
T ss_pred             ccCc---------------------ccccceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHH
Confidence            5432                     1122358999999998877777778999999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCC------cHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCC-CCCC-CCHHHHHHhhcCchhh
Q 047395          312 IELCSGEALFQTHE------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW-PEGA-TSRESIKAVLKLPRLQ  383 (432)
Q Consensus       312 ~elltg~~pf~~~~------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~  383 (432)
                      ++|++|+.||...+      ..+.+..+...+|.+|..+..........+........ .... ......         .
T Consensus       220 ~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~  290 (362)
T d1q8ya_         220 FELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDV---------L  290 (362)
T ss_dssp             HHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHH---------H
T ss_pred             HHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhh---------c
Confidence            99999999997543      34567777888999998877665544333322221111 1110 000000         1


Q ss_pred             hhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 047395          384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD  427 (432)
Q Consensus       384 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~hp~f~~~  427 (432)
                      ..........++.+.|||.+||++||.+||||+|+|+||||++.
T Consensus       291 ~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         291 TEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             HHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             ccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence            11112234567789999999999999999999999999999854

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-54  Score=394.37  Aligned_cols=241  Identities=22%  Similarity=0.352  Sum_probs=191.8

Q ss_pred             eeeecccceEEEEEEec--CCCcEEEEEEeechh---hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEE
Q 047395          101 RKIGEGTFGQVLDCLDR--ETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVF  175 (432)
Q Consensus       101 ~~lg~G~~g~V~~a~~~--~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~  175 (432)
                      ++||+|+||+||+|.+.  .+++.||||+++...   ...+.+.+|++++..++|     ||||+++++++.+ ..+|||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~~~g~~~~~-~~~lvm   86 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN-----PYIVRMIGICEAE-SWMLVM   86 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCC-----TTBCCEEEEEESS-SEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCC-----CCCceEEEEeccC-CEEEEE
Confidence            47999999999999864  456789999996432   334678899999999877     9999999998754 578999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcccc
Q 047395          176 EML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY  254 (432)
Q Consensus       176 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~~~  254 (432)
                      ||| +|+|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++.                   
T Consensus        87 E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~-------------------  145 (277)
T d1xbba_          87 EMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY-------------------  145 (277)
T ss_dssp             ECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE-------------------
T ss_pred             EcCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCc-------------------
Confidence            999 999999998764  6999999999999999999999999999999999999876554                   


Q ss_pred             ccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcH
Q 047395          255 KRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENL  327 (432)
Q Consensus       255 ~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~  327 (432)
                              +||+|||+++.....      .....||+.|+|||++.+..++.++|||||||++|||+| |..||.+.+..
T Consensus       146 --------~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~  217 (277)
T d1xbba_         146 --------AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS  217 (277)
T ss_dssp             --------EEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             --------ccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH
Confidence                    455555555432211      123468999999999999999999999999999999998 89999987766


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +....+.+...  +                    .                          .+..+++++.+||.+||+.
T Consensus       218 ~~~~~i~~~~~--~--------------------~--------------------------~p~~~~~~~~~li~~cl~~  249 (277)
T d1xbba_         218 EVTAMLEKGER--M--------------------G--------------------------CPAGCPREMYDLMNLCWTY  249 (277)
T ss_dssp             HHHHHHHTTCC--C--------------------C--------------------------CCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHcCCC--C--------------------C--------------------------CCcccCHHHHHHHHHHcCC
Confidence            65554432110  0                    0                          1134567789999999999


Q ss_pred             CCCCCCCHHHH---hcCCCC
Q 047395          408 DPSSRLTAHDA---LKHPFF  424 (432)
Q Consensus       408 dP~~R~ta~el---L~hp~f  424 (432)
                      ||++|||++++   |+|+|+
T Consensus       250 dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         250 DVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             STTTSCCHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHhhCHHh
Confidence            99999999998   456654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-53  Score=400.63  Aligned_cols=257  Identities=26%  Similarity=0.417  Sum_probs=208.1

Q ss_pred             CceEEEeeeecccceEEEEEEec---CCCcEEEEEEeech-----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDR---ETGETVAIKVVRSI-----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~---~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      ++|+++++||+|+||+||+|++.   .+|+.||||+++..     ....+.+.+|+++++.++|    ++||++++++++
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h----~pnIv~~~~~~~   99 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ----SPFLVTLHYAFQ   99 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHT----CTTBCCEEEEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccC----CCeEEEeeeeec
Confidence            67999999999999999999874   46899999998642     2335678899999999987    379999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCccccc
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA  245 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~  245 (432)
                      +...+++||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.             
T Consensus       100 ~~~~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~-------------  164 (322)
T d1vzoa_         100 TETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS-------------  164 (322)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-------------
T ss_pred             cCCceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecC-------------
Confidence            999999999999 999999998875  6899999999999999999999999999999999999654             


Q ss_pred             CCCCCccccccCCCCCCeEEeecCCcccccC----CccccccCCCcchhHHHhCC--CCCccchHHHHHHHHHHHHhCCC
Q 047395          246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ----EHNYIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILIELCSGEA  319 (432)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~--~~~~~sDiwSlGvil~elltg~~  319 (432)
                                    ++.+||+|||++.....    ......||+.|+|||.+.+.  .++.++|||||||+||+|++|+.
T Consensus       165 --------------~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~  230 (322)
T d1vzoa_         165 --------------NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS  230 (322)
T ss_dssp             --------------TSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCC
Confidence                          45677777777654322    22345789999999999765  36789999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.+..+....+.+.....                                             ....+..+++.+.+
T Consensus       231 PF~~~~~~~~~~~i~~~~~~~---------------------------------------------~~~~~~~~s~~~~~  265 (322)
T d1vzoa_         231 PFTVDGEKNSQAEISRRILKS---------------------------------------------EPPYPQEMSALAKD  265 (322)
T ss_dssp             TTSCTTSCCCHHHHHHHHHHC---------------------------------------------CCCCCTTSCHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhcccC---------------------------------------------CCCCcccCCHHHHH
Confidence            998765544333332211000                                             00112356778999


Q ss_pred             HHHHccccCCCCCC-----CHHHHhcCCCCCCCcc
Q 047395          400 LLQGLLRYDPSSRL-----TAHDALKHPFFTRDYY  429 (432)
Q Consensus       400 li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~  429 (432)
                      ||.+||++||++||     ||+|+|+||||++..+
T Consensus       266 li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~  300 (322)
T d1vzoa_         266 LIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW  300 (322)
T ss_dssp             HHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             HHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCH
Confidence            99999999999999     5899999999988554

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-53  Score=392.03  Aligned_cols=252  Identities=26%  Similarity=0.327  Sum_probs=202.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI  173 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~l  173 (432)
                      .++|++.+.||+|+||+||+|+++.+ +.||||+++......+.+.+|+.++..++|     +|||++++++.. +.+++
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h-----~nIv~~~g~~~~-~~~~l   88 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQLYAVVSE-EPIYI   88 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHCCC-----TTBCCEEEEECS-SSCEE
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhccc-----CCEeEEEEEEec-CCeEE
Confidence            46899999999999999999998755 579999998766667789999999999987     999999999865 55789


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCcc
Q 047395          174 VFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN  252 (432)
Q Consensus       174 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~~  252 (432)
                      ||||+ +|+|..++.......+++.+++.++.||+.||+|||++||+||||||+||||+.+                   
T Consensus        89 v~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~-------------------  149 (285)
T d1fmka3          89 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN-------------------  149 (285)
T ss_dssp             EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG-------------------
T ss_pred             EEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCC-------------------
Confidence            99999 9999999876544569999999999999999999999999999999999996554                   


Q ss_pred             ccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCC-CCCCCCCcH
Q 047395          253 YYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE-ALFQTHENL  327 (432)
Q Consensus       253 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~-~pf~~~~~~  327 (432)
                              +.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||++|. +||......
T Consensus       150 --------~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~  221 (285)
T d1fmka3         150 --------LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  221 (285)
T ss_dssp             --------GCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             --------CcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHH
Confidence                    45666666666543221    22356899999999999999999999999999999999954 555555555


Q ss_pred             HHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHcccc
Q 047395          328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRY  407 (432)
Q Consensus       328 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  407 (432)
                      +.+..+.+....                                                .....+++++.+||.+||+.
T Consensus       222 ~~~~~i~~~~~~------------------------------------------------~~~~~~~~~l~~li~~cl~~  253 (285)
T d1fmka3         222 EVLDQVERGYRM------------------------------------------------PCPPECPESLHDLMCQCWRK  253 (285)
T ss_dssp             HHHHHHHTTCCC------------------------------------------------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHhcCCC------------------------------------------------CCCcccCHHHHHHHHHHccc
Confidence            555444322110                                                01234567789999999999


Q ss_pred             CCCCCCCHHHHhc--CCCCCCC
Q 047395          408 DPSSRLTAHDALK--HPFFTRD  427 (432)
Q Consensus       408 dP~~R~ta~elL~--hp~f~~~  427 (432)
                      ||++|||+++|++  ++||+..
T Consensus       254 dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         254 EPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             SGGGSCCHHHHHHHHHTTTSCS
T ss_pred             CHhHCcCHHHHHHHHhhhhcCC
Confidence            9999999999998  8999764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-52  Score=382.34  Aligned_cols=246  Identities=20%  Similarity=0.284  Sum_probs=192.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCC----cEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETG----ETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~----~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      .+.|++.+.||+|+||+||+|.++.++    ..||||+++..  ......+.+|+.++..++|     ||||++++++..
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H-----~nIv~~~g~~~~   80 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH-----HNIIRLEGVISK   80 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEECS
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCC-----CCEeeeeEEEec
Confidence            467999999999999999999987654    47999998642  3344568899999999877     999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                      .+..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||+++|+||||||+||||+.              
T Consensus        81 ~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~--------------  145 (283)
T d1mqba_          81 YKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS--------------  145 (283)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--------------
T ss_pred             CCceEEEEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECC--------------
Confidence            99999999999 889999887654 46999999999999999999999999999999999999655              


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCC-
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA-  319 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~-  319 (432)
                                   ++.+||+|||+++.....      .....||+.|+|||++.+..++.++|||||||++|||++|.. 
T Consensus       146 -------------~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~  212 (283)
T d1mqba_         146 -------------NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER  212 (283)
T ss_dssp             -------------TCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             -------------CCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCC
Confidence                         445666666666543221      122457999999999999999999999999999999999554 


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||...+..+....+.....+                                                ..+..++..+.+
T Consensus       213 ~~~~~~~~~~~~~i~~~~~~------------------------------------------------~~~~~~~~~l~~  244 (283)
T d1mqba_         213 PYWELSNHEVMKAINDGFRL------------------------------------------------PTPMDCPSAIYQ  244 (283)
T ss_dssp             TTTTCCHHHHHHHHHTTCCC------------------------------------------------CCCTTCBHHHHH
T ss_pred             ccccCCHHHHHHHHhccCCC------------------------------------------------CCchhhHHHHHH
Confidence            45544444444333221110                                                112245667899


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 047395          400 LLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~  420 (432)
                      ||.+||+.||++|||+.||++
T Consensus       245 li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         245 LMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHCcCCHhHCcCHHHHHH
Confidence            999999999999999999875

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-52  Score=385.73  Aligned_cols=246  Identities=23%  Similarity=0.316  Sum_probs=194.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCC---cEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETG---ETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~---~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      .++|++.+.||+|+||+||+|++..++   ..||||.++..  ....+.+.+|+.++..++|     |||+++++++. .
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~H-----pnIv~l~~~~~-~   79 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-----PHIVKLIGVIT-E   79 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEEC-S
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEe-c
Confidence            578999999999999999999987553   46889988642  3445678899999998876     99999999986 4


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      +.+|+||||+ +|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++             
T Consensus        80 ~~~~iv~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~-------------  145 (273)
T d1mp8a_          80 NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND-------------  145 (273)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-------------
T ss_pred             CeEEEEEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCC-------------
Confidence            6789999999 999999887654 4699999999999999999999999999999999999977654             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQ  322 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~  322 (432)
                                    .+||+|||+|+.....    .....||+.|+|||++.+..++.++|||||||++|||+| |.+||.
T Consensus       146 --------------~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~  211 (273)
T d1mp8a_         146 --------------CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ  211 (273)
T ss_dssp             --------------EEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             --------------cEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCC
Confidence                          4566666665543221    223467999999999999999999999999999999998 899999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       323 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      +.+..+....+......                                                ..++.+++.+.+||.
T Consensus       212 ~~~~~~~~~~i~~~~~~------------------------------------------------~~~~~~~~~~~~li~  243 (273)
T d1mp8a_         212 GVKNNDVIGRIENGERL------------------------------------------------PMPPNCPPTLYSLMT  243 (273)
T ss_dssp             TCCGGGHHHHHHTTCCC------------------------------------------------CCCTTCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCC------------------------------------------------CCCCCCCHHHHHHHH
Confidence            88776665554322110                                                012356677999999


Q ss_pred             HccccCCCCCCCHHHHhcC
Q 047395          403 GLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~h  421 (432)
                      +||+.||++|||+.||++|
T Consensus       244 ~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         244 KCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHH
Confidence            9999999999999999875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-52  Score=382.75  Aligned_cols=245  Identities=24%  Similarity=0.352  Sum_probs=194.0

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc-cCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD-YRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~-~~~~~~  172 (432)
                      .++|++++.||+|+||.||+|++.  |..||||+++.. ...+.+.+|++++..++|     |||+++++++. ..+.+|
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~-~~~~~~~~E~~~l~~l~H-----pnIv~~~g~~~~~~~~~~   77 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQLRH-----SNLVQLLGVIVEEKGGLY   77 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-C--HHHHHTHHHHTTCCC-----TTBCCEEEEECCC--CCE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH-HHHHHHHHHHHHHHhCCC-----CCEeeEEEEEEecCCcEE
Confidence            467999999999999999999874  789999999754 345678899999998876     99999999874 456789


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          173 IVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       173 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      +||||+ +|+|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++                    
T Consensus        78 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~--------------------  137 (262)
T d1byga_          78 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS--------------------  137 (262)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC--------------------
T ss_pred             EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheec--------------------
Confidence            999999 99999999765434589999999999999999999999999999999999954                    


Q ss_pred             cccccCCCCCCeEEeecCCcccccCCccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHL  330 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf~~~~~~~~~  330 (432)
                             .++.+||+|||+++..........+|..|+|||++.+..++.++|||||||++|||+| |.+||...+..+..
T Consensus       138 -------~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~  210 (262)
T d1byga_         138 -------EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV  210 (262)
T ss_dssp             -------TTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH
T ss_pred             -------CCCCEeecccccceecCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence                   4566788888888776666666778999999999999999999999999999999998 78999877665554


Q ss_pred             HHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHHHccccCCC
Q 047395          331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPS  410 (432)
Q Consensus       331 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  410 (432)
                      ..+....                      .                          ...+..+++.+.+||.+||+.||+
T Consensus       211 ~~i~~~~----------------------~--------------------------~~~~~~~~~~~~~li~~cl~~dP~  242 (262)
T d1byga_         211 PRVEKGY----------------------K--------------------------MDAPDGCPPAVYEVMKNCWHLDAA  242 (262)
T ss_dssp             HHHTTTC----------------------C--------------------------CCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHHcCC----------------------C--------------------------CCCCccCCHHHHHHHHHHcccCHh
Confidence            4432110                      0                          011234566789999999999999


Q ss_pred             CCCCHHHHhcC
Q 047395          411 SRLTAHDALKH  421 (432)
Q Consensus       411 ~R~ta~elL~h  421 (432)
                      +|||+.+++++
T Consensus       243 ~Rps~~~l~~~  253 (262)
T d1byga_         243 MRPSFLQLREQ  253 (262)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999863

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-51  Score=383.96  Aligned_cols=250  Identities=21%  Similarity=0.288  Sum_probs=190.7

Q ss_pred             cCceEEEeeeecccceEEEEEEecC-----CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRE-----TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~-----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .++|++.++||+|+||+||+|++..     +++.||||+++..  ......+.+|..++..+.|    |+||+.+++++.
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~----h~~iv~~~~~~~   87 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH----HLNVVNLLGACT   87 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCC----CTTBCCEEEEEC
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcC----CCeEEEeeeeec
Confidence            4789999999999999999999754     4568999998643  2334567778888877765    489999988865


Q ss_pred             c-CCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEe
Q 047395          167 Y-RNHICIVFEML-GPSLYDFLRKNN--------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF  230 (432)
Q Consensus       167 ~-~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  230 (432)
                      . ++.+++||||| +|+|.+++....              ...+++..++.++.||+.||+|||++|||||||||+|||+
T Consensus        88 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl  167 (299)
T d1ywna1          88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  167 (299)
T ss_dssp             STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE
Confidence            4 56799999999 999999997642              1248899999999999999999999999999999999997


Q ss_pred             ecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCCCCccchHH
Q 047395          231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCDMW  305 (432)
Q Consensus       231 ~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~sDiw  305 (432)
                      +.+                           +.+||+|||+|+....     .....+||+.|+|||++.+..++.++|||
T Consensus       168 ~~~---------------------------~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiw  220 (299)
T d1ywna1         168 SEK---------------------------NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW  220 (299)
T ss_dssp             CGG---------------------------GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHH
T ss_pred             CCC---------------------------CcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCccccee
Confidence            554                           4566666666654222     12335799999999999999999999999


Q ss_pred             HHHHHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhh
Q 047395          306 SVGCILIELCSG-EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN  384 (432)
Q Consensus       306 SlGvil~elltg-~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (432)
                      ||||++|||+|| .+||.+.+..+.+..+......+                                            
T Consensus       221 S~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~--------------------------------------------  256 (299)
T d1ywna1         221 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--------------------------------------------  256 (299)
T ss_dssp             HHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCC--------------------------------------------
T ss_pred             ehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC--------------------------------------------
Confidence            999999999986 56887765544333322211100                                            


Q ss_pred             hhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       385 ~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                         ..++.+++++.+||.+||+.||++|||++|+++|
T Consensus       257 ---~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         257 ---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence               1123456778999999999999999999999986

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.3e-51  Score=382.05  Aligned_cols=263  Identities=23%  Similarity=0.320  Sum_probs=205.7

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||++.... ....+..|+++++.+.|    +++|+.+..++...+..
T Consensus         4 ~vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~----~~~i~~~~~~~~~~~~~   78 (299)
T d1ckia_           4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQG----GVGIPTIRWCGAEGDYN   78 (299)
T ss_dssp             EETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTT----STTCCCEEEEEEETTEE
T ss_pred             eECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccC----CCcccEEEEEEecCCEE
Confidence            35678999999999999999999999999999999987533 34567889999999876    25566677777888999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      ++||||++++|.+.+.... ..+++..+..++.||+.||+|||++||+||||||+|||+..                   
T Consensus        79 ~ivme~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~-------------------  138 (299)
T d1ckia_          79 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL-------------------  138 (299)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECC-------------------
T ss_pred             EEEEEEcCCchhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccc-------------------
Confidence            9999999999988877654 47999999999999999999999999999999999999764                   


Q ss_pred             cccccCCCCCCeEEeecCCcccccCC----------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQE----------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                           .+.+..++|+|||+|+.....          ....+||+.|+|||++.+..++.++|||||||++|||+||..||
T Consensus       139 -----~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~  213 (299)
T d1ckia_         139 -----GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW  213 (299)
T ss_dssp             -----GGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -----cCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcc
Confidence                 234567888888888764322          23457999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      ......+....+......                                         ..........+.+++++.+||
T Consensus       214 ~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~p~~~~~li  252 (299)
T d1ckia_         214 QGLKAATKRQKYERISEK-----------------------------------------KMSTPIEVLCKGYPSEFATYL  252 (299)
T ss_dssp             CCCC-------HHHHHHH-----------------------------------------HHHSCHHHHTTTSCHHHHHHH
T ss_pred             cccchHHHHHHHHHhhcc-----------------------------------------cCCCChhHhccCCCHHHHHHH
Confidence            876554433222111000                                         000001112346778899999


Q ss_pred             HHccccCCCCCCCHH---HHhcCCCCC
Q 047395          402 QGLLRYDPSSRLTAH---DALKHPFFT  425 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~---elL~hp~f~  425 (432)
                      .+||+.||++||+++   ++|+|+|.+
T Consensus       253 ~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         253 NFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             HHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHccCChhHCcCHHHHHHHHHHHHHH
Confidence            999999999999986   556777653

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-51  Score=387.50  Aligned_cols=245  Identities=21%  Similarity=0.295  Sum_probs=194.0

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCc----EEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGE----TVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR  168 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~----~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~  168 (432)
                      ++|++++.||+|+||+||+|++..+|+    .||+|.++..  ....+.+.+|+.++..++|     ||||++++++.++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H-----pnIv~l~g~~~~~   83 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN-----PHVCRLLGICLTS   83 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCC-----TTBCCEEEEEESS
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCC-----CCEeeEEEEEecC
Confidence            469999999999999999999988876    5888887642  2345678999999999977     9999999999875


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCC
Q 047395          169 NHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS  247 (432)
Q Consensus       169 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~  247 (432)
                      + .++++|++ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++             
T Consensus        84 ~-~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~-------------  148 (317)
T d1xkka_          84 T-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-------------  148 (317)
T ss_dssp             S-EEEEEECCTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT-------------
T ss_pred             C-eeEEEEeccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCC-------------
Confidence            5 55667766 999999988764 5799999999999999999999999999999999999977655             


Q ss_pred             CCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCCCC
Q 047395          248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALF  321 (432)
Q Consensus       248 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~pf  321 (432)
                                    .+||+|||+|+.....     .....||+.|+|||++.+..++.++|||||||++|||+| |.+||
T Consensus       149 --------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~  214 (317)
T d1xkka_         149 --------------HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY  214 (317)
T ss_dssp             --------------EEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             --------------CeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCC
Confidence                          4555555555443221     122468999999999999999999999999999999998 89999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHH
Q 047395          322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLL  401 (432)
Q Consensus       322 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  401 (432)
                      .+.+..+....+......                                                ..++.+++.+.+||
T Consensus       215 ~~~~~~~~~~~i~~~~~~------------------------------------------------~~p~~~~~~~~~li  246 (317)
T d1xkka_         215 DGIPASEISSILEKGERL------------------------------------------------PQPPICTIDVYMIM  246 (317)
T ss_dssp             TTSCGGGHHHHHHHTCCC------------------------------------------------CCCTTBCHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCCC------------------------------------------------CCCcccCHHHHHHH
Confidence            887766555444332110                                                01234567789999


Q ss_pred             HHccccCCCCCCCHHHHhcC
Q 047395          402 QGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       402 ~~~L~~dP~~R~ta~elL~h  421 (432)
                      .+||+.||++|||+.|+++|
T Consensus       247 ~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         247 VKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             HHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCChhhCcCHHHHHHH
Confidence            99999999999999999976

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.7e-50  Score=374.05  Aligned_cols=256  Identities=22%  Similarity=0.287  Sum_probs=206.0

Q ss_pred             eecCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395           92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus        92 ~~~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+.++|+++++||+|+||+||+|++..+|+.||||+++... ....+.+|++++..+.+    +++++.+++++..+...
T Consensus         2 vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~----~~~i~~~~~~~~~~~~~   76 (293)
T d1csna_           2 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAG----CTGIPNVYYFGQEGLHN   76 (293)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTT----CTTCCCEEEEEEETTEE
T ss_pred             CCCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcC----CCCCCEEEEEeecCCcc
Confidence            45789999999999999999999999999999999986532 34567789999998876    37888999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCCc
Q 047395          172 CIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV  251 (432)
Q Consensus       172 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~~  251 (432)
                      |+||||++++|.+++.... ..+++..+..++.|++.||+|||++||+||||||+|||+..+.                 
T Consensus        77 ~~vme~~~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~-----------------  138 (293)
T d1csna_          77 VLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPN-----------------  138 (293)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSS-----------------
T ss_pred             EEEEEecCCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcc-----------------
Confidence            9999999999999998754 4699999999999999999999999999999999999986532                 


Q ss_pred             cccccCCCCCCeEEeecCCcccccC----------CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCC
Q 047395          252 NYYKRLPKSSAIKVIDFGSTAYEHQ----------EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF  321 (432)
Q Consensus       252 ~~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf  321 (432)
                           ....+.+||+|||+|+....          .....+||+.|||||++.+..++.++|||||||++|||+||..||
T Consensus       139 -----~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf  213 (293)
T d1csna_         139 -----SKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW  213 (293)
T ss_dssp             -----STTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -----cccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcC
Confidence                 12356788899998875332          123457999999999999999999999999999999999999999


Q ss_pred             CCCCcHHH---HHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHH
Q 047395          322 QTHENLEH---LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI  398 (432)
Q Consensus       322 ~~~~~~~~---~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  398 (432)
                      .+......   ...+.......+                                            .......+++++.
T Consensus       214 ~~~~~~~~~~~~~~i~~~~~~~~--------------------------------------------~~~l~~~~p~~l~  249 (293)
T d1csna_         214 QGLKAATNKQKYERIGEKKQSTP--------------------------------------------LRELCAGFPEEFY  249 (293)
T ss_dssp             SSCCSCCHHHHHHHHHHHHHHSC--------------------------------------------HHHHTTTSCHHHH
T ss_pred             CCccchhHHHHHHHHHhccCCCC--------------------------------------------hHHhcCCCCHHHH
Confidence            86543322   222211110000                                            0111234667799


Q ss_pred             HHHHHccccCCCCCCCHHHHh
Q 047395          399 DLLQGLLRYDPSSRLTAHDAL  419 (432)
Q Consensus       399 ~li~~~L~~dP~~R~ta~elL  419 (432)
                      +++..|+..+|++||+.+.+.
T Consensus       250 ~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         250 KYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHHHHHHCCTTCCCCHHHHH
T ss_pred             HHHHHHhcCCcccCcCHHHHH
Confidence            999999999999999876654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-51  Score=376.71  Aligned_cols=245  Identities=21%  Similarity=0.303  Sum_probs=190.2

Q ss_pred             CceEEEeeeecccceEEEEEEecCC-C--cEEEEEEeech----hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccccc
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRET-G--ETVAIKVVRSI----KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDY  167 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~-~--~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~  167 (432)
                      ++|++++.||+|+||+||+|+...+ +  ..||||+++..    ....+.+.+|+.++..++|     |||+++++++.+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H-----~nIv~~~g~~~~   82 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH-----RNLIRLYGVVLT   82 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCC-----TTBCCEEEEECS
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCC-----CCEEEEEEEEee
Confidence            5799999999999999999986533 3  36899998643    2334578899999999977     999999999976


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccC
Q 047395          168 RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR  246 (432)
Q Consensus       168 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~  246 (432)
                       +..++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++            
T Consensus        83 -~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~------------  148 (273)
T d1u46a_          83 -PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD------------  148 (273)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT------------
T ss_pred             -cchheeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcccccc------------
Confidence             4678999999 999999887654 3699999999999999999999999999999999999976544            


Q ss_pred             CCCCccccccCCCCCCeEEeecCCcccccCC------ccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHh-CCC
Q 047395          247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE------HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEA  319 (432)
Q Consensus       247 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~ellt-g~~  319 (432)
                                     .+||+|||+++.....      .....||..|+|||++.+..++.++|||||||++|||+| |..
T Consensus       149 ---------------~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~  213 (273)
T d1u46a_         149 ---------------LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE  213 (273)
T ss_dssp             ---------------EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ---------------ceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCC
Confidence                           4666666666543222      123457889999999999999999999999999999998 899


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHH
Q 047395          320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLID  399 (432)
Q Consensus       320 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  399 (432)
                      ||.+.+..+....+.+....++                                               .+..+++.+.+
T Consensus       214 Pf~~~~~~~~~~~i~~~~~~~~-----------------------------------------------~~~~~~~~l~~  246 (273)
T d1u46a_         214 PWIGLNGSQILHKIDKEGERLP-----------------------------------------------RPEDCPQDIYN  246 (273)
T ss_dssp             TTTTCCHHHHHHHHHTSCCCCC-----------------------------------------------CCTTCCHHHHH
T ss_pred             CCCCcCHHHHHHHHHhCCCCCC-----------------------------------------------CcccccHHHHH
Confidence            9998887776655533211111                                               12345677999


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 047395          400 LLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       400 li~~~L~~dP~~R~ta~elL~  420 (432)
                      ||.+||+.||++|||+.||++
T Consensus       247 li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         247 VMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999873

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-50  Score=378.25  Aligned_cols=248  Identities=20%  Similarity=0.281  Sum_probs=202.1

Q ss_pred             ecCceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeeccc
Q 047395           93 LTSRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWF  165 (432)
Q Consensus        93 ~~~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~  165 (432)
                      ..++|++++.||+|+||+||+|+++     .+++.||||+++..  ....+.+.+|+.+++.++|     +||+++++++
T Consensus        11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h-----~niv~~~~~~   85 (301)
T d1lufa_          11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN-----PNIVKLLGVC   85 (301)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCC-----TTBCCEEEEE
T ss_pred             CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCC-----CCcccceeee
Confidence            4578999999999999999999875     35678999998643  3345678999999999877     9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEecc
Q 047395          166 DYRNHICIVFEML-GPSLYDFLRKNN----------------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTD  222 (432)
Q Consensus       166 ~~~~~~~lv~e~~-~~~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD  222 (432)
                      ...+..++||||+ +++|.+++....                      ...+++..+..++.||+.||+|||++||||||
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD  165 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  165 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence            9999999999999 999999997532                      12488999999999999999999999999999


Q ss_pred             CCCCcEEeecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccC-----CccccccCCCcchhHHHhCCC
Q 047395          223 LKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-----EHNYIVSTRHYRAPEVILGLG  297 (432)
Q Consensus       223 lkp~NIli~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~  297 (432)
                      |||+|||++.                           ++.+||+|||+|+....     ......||+.|+|||++.+..
T Consensus       166 lKp~NILld~---------------------------~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  218 (301)
T d1lufa_         166 LATRNCLVGE---------------------------NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR  218 (301)
T ss_dssp             CSGGGEEECG---------------------------GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCC
T ss_pred             EcccceEECC---------------------------CCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCC
Confidence            9999999654                           45677777777654322     123356889999999999999


Q ss_pred             CCccchHHHHHHHHHHHHhCC-CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHh
Q 047395          298 WSYPCDMWSVGCILIELCSGE-ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV  376 (432)
Q Consensus       298 ~~~~sDiwSlGvil~elltg~-~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (432)
                      ++.++|||||||++|||++|. +||.+.+..+....+.+...  +                                   
T Consensus       219 ~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~--~-----------------------------------  261 (301)
T d1lufa_         219 YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI--L-----------------------------------  261 (301)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--C-----------------------------------
T ss_pred             CChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCC--C-----------------------------------
Confidence            999999999999999999985 68888777766554432211  0                                   


Q ss_pred             hcCchhhhhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                                 ..++.+++++.+||.+||+.||++|||+.||++
T Consensus       262 -----------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         262 -----------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                       012345667899999999999999999999964

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-50  Score=375.42  Aligned_cols=248  Identities=19%  Similarity=0.299  Sum_probs=195.4

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCC-------cEEEEEEeechh--hhhHhHHHHHHHHHHHHhcCCCCCceeEeecc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETG-------ETVAIKVVRSIK--KYREAAMTEIDVLELLKRYDRSGSRCVQIRNW  164 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~-------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~  164 (432)
                      .++|++++.||+|+||.||+|++..++       ..||||+++...  .....+.+|...+..+.+    |||||+++++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~----HpnIv~~~~~   87 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK----HKNIINLLGA   87 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCC----CTTBCCEEEE
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcC----CCeEEecccc
Confidence            578999999999999999999976554       379999996433  344677788888888732    3999999999


Q ss_pred             cccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEE
Q 047395          165 FDYRNHICIVFEML-GPSLYDFLRKNN--------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL  229 (432)
Q Consensus       165 ~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  229 (432)
                      +.+++.+++||||| +|+|.++|....              ...+++.+++.++.||+.||+|||++|||||||||+|||
T Consensus        88 ~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiL  167 (299)
T d1fgka_          88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL  167 (299)
T ss_dssp             ECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             cccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeeccccee
Confidence            99999999999999 999999997653              135899999999999999999999999999999999999


Q ss_pred             eecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchH
Q 047395          230 FVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDM  304 (432)
Q Consensus       230 i~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDi  304 (432)
                      ++.+                           +.+||+|||++......     .....||+.|+|||++.+..|+.++||
T Consensus       168 l~~~---------------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~Di  220 (299)
T d1fgka_         168 VTED---------------------------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV  220 (299)
T ss_dssp             ECTT---------------------------CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHH
T ss_pred             ecCC---------------------------CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhh
Confidence            6554                           45666666666543322     233568999999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhh
Q 047395          305 WSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ  383 (432)
Q Consensus       305 wSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (432)
                      |||||++|||++ |.+||.+.+..+....+.....  +                    .                     
T Consensus       221 wS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~--~--------------------~---------------------  257 (299)
T d1fgka_         221 WSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR--M--------------------D---------------------  257 (299)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC--C--------------------C---------------------
T ss_pred             HHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCC--C--------------------C---------------------
Confidence            999999999998 7999987776655444322110  0                    0                     


Q ss_pred             hhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       384 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                           .+..+++.+.+||.+||+.||++|||+.||++
T Consensus       258 -----~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         258 -----KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             -----CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----CCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence                 11245667899999999999999999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-51  Score=380.49  Aligned_cols=247  Identities=23%  Similarity=0.286  Sum_probs=197.7

Q ss_pred             CceEEEeeeecccceEEEEEEecCCCcE--EEEEEeech--hhhhHhHHHHHHHHHHH-HhcCCCCCceeEeecccccCC
Q 047395           95 SRYKILRKIGEGTFGQVLDCLDRETGET--VAIKVVRSI--KKYREAAMTEIDVLELL-KRYDRSGSRCVQIRNWFDYRN  169 (432)
Q Consensus        95 ~~y~i~~~lg~G~~g~V~~a~~~~~~~~--vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~~~~~~iv~~~~~~~~~~  169 (432)
                      ++|++.++||+|+||+||+|+++.++..  ||||.++..  ....+.+.+|++++..+ +|     |||+++++++..++
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~H-----pnIv~~~~~~~~~~   84 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH-----PNIINLLGACEHRG   84 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCC-----TTBCCEEEEEEETT
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCC-----CCEeeEEEEEecCC
Confidence            6899999999999999999999888864  677777532  23455788999999887 45     99999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCC
Q 047395          170 HICIVFEML-GPSLYDFLRKN--------------NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE  234 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  234 (432)
                      .+++||||+ +|+|.++|...              ....+++..+..++.||+.||.|||++||+||||||+|||++.  
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~--  162 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--  162 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG--
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcC--
Confidence            999999999 99999999754              1246999999999999999999999999999999999999654  


Q ss_pred             ccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCc--cccccCCCcchhHHHhCCCCCccchHHHHHHHHH
Q 047395          235 YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI  312 (432)
Q Consensus       235 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~  312 (432)
                                               ++.+||+|||+++......  ....||..|+|||.+.+..++.++|||||||++|
T Consensus       163 -------------------------~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~  217 (309)
T d1fvra_         163 -------------------------NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW  217 (309)
T ss_dssp             -------------------------GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             -------------------------CCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHH
Confidence                                     4567777777776533322  2346899999999999999999999999999999


Q ss_pred             HHHhCC-CCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcc
Q 047395          313 ELCSGE-ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD  391 (432)
Q Consensus       313 elltg~-~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (432)
                      ||++|. +||.+.+..+....+.+..                      ..                          ..+.
T Consensus       218 ell~~~~~p~~~~~~~~~~~~i~~~~----------------------~~--------------------------~~~~  249 (309)
T d1fvra_         218 EIVSLGGTPYCGMTCAELYEKLPQGY----------------------RL--------------------------EKPL  249 (309)
T ss_dssp             HHHTTSCCTTTTCCHHHHHHHGGGTC----------------------CC--------------------------CCCT
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHhcC----------------------CC--------------------------CCCc
Confidence            999965 6787766655544332110                      00                          1123


Q ss_pred             cchHHHHHHHHHccccCCCCCCCHHHHhcC
Q 047395          392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKH  421 (432)
Q Consensus       392 ~~~~~l~~li~~~L~~dP~~R~ta~elL~h  421 (432)
                      .+++++.+||.+||+.||++|||++||++|
T Consensus       250 ~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         250 NCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             TBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            466779999999999999999999999975

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-49  Score=371.90  Aligned_cols=249  Identities=23%  Similarity=0.330  Sum_probs=199.1

Q ss_pred             cCceEEEeeeecccceEEEEEEec-----CCCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDR-----ETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD  166 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~  166 (432)
                      .++|++.++||+|+||.||+|++.     .+++.||||+++..  ......+.+|+.++..+.+    |||||++++++.
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~----HpnIv~~~g~~~   97 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN----HMNIVNLLGACT   97 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC----CTTBCCEEEEEC
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccC----CCCEEEEEEEEe
Confidence            578999999999999999999863     45679999999743  3345578899999999842    399999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEE
Q 047395          167 YRNHICIVFEML-GPSLYDFLRKNN----------------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL  229 (432)
Q Consensus       167 ~~~~~~lv~e~~-~~~L~~~l~~~~----------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  229 (432)
                      ....+++||||| +|+|.+++....                ...+++..+..++.||+.||+|||++|||||||||+|||
T Consensus        98 ~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl  177 (311)
T d1t46a_          98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL  177 (311)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccc
Confidence            999999999999 999999998643                125899999999999999999999999999999999999


Q ss_pred             eecCCccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchH
Q 047395          230 FVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDM  304 (432)
Q Consensus       230 i~~~~~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDi  304 (432)
                      ++.++.+|++|||+                           ++.....     ....+||+.|+|||++.+..++.++||
T Consensus       178 ~~~~~~~ki~DfG~---------------------------~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DI  230 (311)
T d1t46a_         178 LTHGRITKICDFGL---------------------------ARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV  230 (311)
T ss_dssp             EETTTEEEECCCGG---------------------------GSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             ccccCcccccccch---------------------------heeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccc
Confidence            87665555555554                           4432211     123478999999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhh
Q 047395          305 WSVGCILIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ  383 (432)
Q Consensus       305 wSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (432)
                      |||||++|||+| |.+||.+.+..+.+..+......+                                           
T Consensus       231 wS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~-------------------------------------------  267 (311)
T d1t46a_         231 WSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM-------------------------------------------  267 (311)
T ss_dssp             HHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCC-------------------------------------------
T ss_pred             cchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC-------------------------------------------
Confidence            999999999998 677777766655544433221111                                           


Q ss_pred             hhhhhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       384 ~~~~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                          ..+..+++.+.+||.+||+.||++|||++||++
T Consensus       268 ----~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         268 ----LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             ----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----CCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                011245667899999999999999999999985

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-50  Score=375.50  Aligned_cols=256  Identities=20%  Similarity=0.326  Sum_probs=207.7

Q ss_pred             ceecCceEEEeeeecccceEEEEEEecC-----CCcEEEEEEeech--hhhhHhHHHHHHHHHHHHhcCCCCCceeEeec
Q 047395           91 ENLTSRYKILRKIGEGTFGQVLDCLDRE-----TGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDRSGSRCVQIRN  163 (432)
Q Consensus        91 ~~~~~~y~i~~~lg~G~~g~V~~a~~~~-----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~  163 (432)
                      +...++|++.++||+|+||+||+|.+..     ++..||||+++..  ......+.+|+.++..+.|     +||+++++
T Consensus        16 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h-----~nIv~~~~   90 (308)
T d1p4oa_          16 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC-----HHVVRLLG   90 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCC-----TTBCCEEE
T ss_pred             eecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCC-----CCEeeeee
Confidence            3445899999999999999999998753     3578999999743  2334567899999988876     99999999


Q ss_pred             ccccCCeEEEEEccC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCC
Q 047395          164 WFDYRNHICIVFEML-GPSLYDFLRKNN--------YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE  234 (432)
Q Consensus       164 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  234 (432)
                      ++...+..++||||+ +|+|.+++....        ...+++..+..++.||+.||.|||+++|+||||||+|||++   
T Consensus        91 ~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld---  167 (308)
T d1p4oa_          91 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---  167 (308)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC---
T ss_pred             EEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeec---
Confidence            999999999999999 999999987531        12478899999999999999999999999999999999965   


Q ss_pred             ccccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCC-----ccccccCCCcchhHHHhCCCCCccchHHHHHH
Q 047395          235 YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE-----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC  309 (432)
Q Consensus       235 ~~k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGv  309 (432)
                                              .+..+||+|||+|+.....     .....||+.|+|||.+.+..++.++|||||||
T Consensus       168 ------------------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~  223 (308)
T d1p4oa_         168 ------------------------EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV  223 (308)
T ss_dssp             ------------------------TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             ------------------------CCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHH
Confidence                                    4556777777777643322     12246899999999999999999999999999


Q ss_pred             HHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhh
Q 047395          310 ILIELCSG-EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ  388 (432)
Q Consensus       310 il~elltg-~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (432)
                      ++|||+|| .+||.+.+..+.+..+.+...  +                                              .
T Consensus       224 il~El~t~~~~p~~~~~~~~~~~~i~~~~~--~----------------------------------------------~  255 (308)
T d1p4oa_         224 VLWEIATLAEQPYQGLSNEQVLRFVMEGGL--L----------------------------------------------D  255 (308)
T ss_dssp             HHHHHHHTSCCTTTTSCHHHHHHHHHTTCC--C----------------------------------------------C
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHhCCC--C----------------------------------------------C
Confidence            99999998 588888777666655433111  0                                              0


Q ss_pred             hcccchHHHHHHHHHccccCCCCCCCHHHHhc------CCCCCC
Q 047395          389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK------HPFFTR  426 (432)
Q Consensus       389 ~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~------hp~f~~  426 (432)
                      .++.+++.+.+||.+||+.||++|||+.|+++      +|+|++
T Consensus       256 ~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         256 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence            11245667999999999999999999999997      788865

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-48  Score=364.28  Aligned_cols=250  Identities=17%  Similarity=0.197  Sum_probs=192.2

Q ss_pred             EEEeeeecccceEEEEEEecCCC---cEEEEEEeec--hhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccc-cCCeE
Q 047395           98 KILRKIGEGTFGQVLDCLDRETG---ETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD-YRNHI  171 (432)
Q Consensus        98 ~i~~~lg~G~~g~V~~a~~~~~~---~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~-~~~~~  171 (432)
                      .+.++||+|+||+||+|++..++   ..||||.++.  .....+.+.+|++++..++|     |||+++++++. .++..
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~H-----pnIv~~~g~~~~~~~~~  104 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH-----PNVLSLLGICLRSEGSP  104 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCC-----TTBCCCCEEEEETTTEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC-----CCEeEEeEEEEecCCce
Confidence            34688999999999999987653   3699999863  33445779999999999877     99999999865 45789


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCccccCCcccccCCCCC
Q 047395          172 CIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD  250 (432)
Q Consensus       172 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k~~df~~~~~~~~~  250 (432)
                      ++||||| +++|.+++.... ..+++..+..++.|++.||.|||+.+|+||||||+|||+++++.               
T Consensus       105 ~lv~E~~~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~---------------  168 (311)
T d1r0pa_         105 LVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT---------------  168 (311)
T ss_dssp             EEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC---------------
T ss_pred             EEEEEEeecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCC---------------
Confidence            9999999 999999988654 46788899999999999999999999999999999999765544               


Q ss_pred             ccccccCCCCCCeEEeecCCcccccC-------CccccccCCCcchhHHHhCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 047395          251 VNYYKRLPKSSAIKVIDFGSTAYEHQ-------EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT  323 (432)
Q Consensus       251 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDiwSlGvil~elltg~~pf~~  323 (432)
                                  +||+|||+++....       ......||+.|+|||++.+..++.++|||||||++|||+||..||..
T Consensus       169 ------------~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~  236 (311)
T d1r0pa_         169 ------------VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP  236 (311)
T ss_dssp             ------------EEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred             ------------EEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCC
Confidence                        55555555543221       12234689999999999999999999999999999999997777754


Q ss_pred             CCc-HHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhhhhhcccchHHHHHHHH
Q 047395          324 HEN-LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQ  402 (432)
Q Consensus       324 ~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  402 (432)
                      ... .+....+....  .                                              ...++.+++.+.+||.
T Consensus       237 ~~~~~~~~~~i~~g~--~----------------------------------------------~~~p~~~~~~l~~li~  268 (311)
T d1r0pa_         237 DVNTFDITVYLLQGR--R----------------------------------------------LLQPEYCPDPLYEVML  268 (311)
T ss_dssp             ------CHHHHHTTC--C----------------------------------------------CCCCTTCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHcCC--C----------------------------------------------CCCcccCcHHHHHHHH
Confidence            332 22222211110  0                                              0012345667899999


Q ss_pred             HccccCCCCCCCHHHHhcC------CCCCCCc
Q 047395          403 GLLRYDPSSRLTAHDALKH------PFFTRDY  428 (432)
Q Consensus       403 ~~L~~dP~~R~ta~elL~h------p~f~~~~  428 (432)
                      +||+.||++|||+.|+++|      .|..+++
T Consensus       269 ~cl~~dP~~RPs~~ei~~~L~~i~~~~~~~~~  300 (311)
T d1r0pa_         269 KCWHPKAEMRPSFSELVSRISAIFSTFIGEHY  300 (311)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCB
T ss_pred             HHcCCCHhHCcCHHHHHHHHHHHHHhhhhhhc
Confidence            9999999999999999988      7776654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-48  Score=364.17  Aligned_cols=261  Identities=21%  Similarity=0.246  Sum_probs=182.1

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccC----C
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYR----N  169 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~----~  169 (432)
                      ..+|.+.+.||+|+||+||+|+.  +|+.||||+++...........|+..+..++     ||||+++++++...    .
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~-----HpnIv~~~~~~~~~~~~~~   74 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLR-----HENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCC-----CTTBCCEEEEEEEECSSSE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhHHHHHHHHHHHhhCC-----CCcCcceEEEEEeCCCcce
Confidence            45799999999999999999986  5899999999754433222223333333333     59999999998653    3


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh--------CCcEeccCCCCcEEeecCCccccCC
Q 047395          170 HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD--------LRLIHTDLKPENILFVSPEYLKIPD  240 (432)
Q Consensus       170 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--------~~ivHrDlkp~NIli~~~~~~k~~d  240 (432)
                      .+|+||||+ +|+|.+++++.   .+++..+..++.|++.||.|||+        +|||||||||+||||+.        
T Consensus        75 ~~~lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~--------  143 (303)
T d1vjya_          75 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK--------  143 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECT--------
T ss_pred             EEEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcC--------
Confidence            689999999 99999999875   49999999999999999999996        59999999999999654        


Q ss_pred             cccccCCCCCccccccCCCCCCeEEeecCCcccccC-------CccccccCCCcchhHHHhCCC------CCccchHHHH
Q 047395          241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ-------EHNYIVSTRHYRAPEVILGLG------WSYPCDMWSV  307 (432)
Q Consensus       241 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~------~~~~sDiwSl  307 (432)
                                         ++.+||+|||++.....       .....+||+.|+|||++.+..      ++.++|||||
T Consensus       144 -------------------~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~  204 (303)
T d1vjya_         144 -------------------NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM  204 (303)
T ss_dssp             -------------------TSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHH
T ss_pred             -------------------CCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhh
Confidence                               45667777776654322       123457999999999997653      5678999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHhcCCcchhhhccCCcCCCCCCCCHHHHHHhhcCchhhhhh-
Q 047395          308 GCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV-  386 (432)
Q Consensus       308 Gvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  386 (432)
                      ||+||||+||..||..........                             ............+............. 
T Consensus       205 Gvvl~el~tg~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~p~~~  255 (303)
T d1vjya_         205 GLVFWEIARRCSIGGIHEDYQLPY-----------------------------YDLVPSDPSVEEMRKVVCEQKLRPNIP  255 (303)
T ss_dssp             HHHHHHHHHTBCBTTBCCCCCCTT-----------------------------TTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred             HHHHHHHhhCCCCCCcccccccch-----------------------------hhcccccchHHHHHHHHhccccCCCCC
Confidence            999999999998885432210000                             00000011111111111110000000 


Q ss_pred             -hhhcccchHHHHHHHHHccccCCCCCCCHHHHhc
Q 047395          387 -MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK  420 (432)
Q Consensus       387 -~~~~~~~~~~l~~li~~~L~~dP~~R~ta~elL~  420 (432)
                       ..........+.+||.+||+.||++|||+.||++
T Consensus       256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         256 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             GGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             cccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence             0011223455889999999999999999999975

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=1.5e-26  Score=199.65  Aligned_cols=163  Identities=20%  Similarity=0.224  Sum_probs=113.4

Q ss_pred             eEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-------------------hhhHhHHHHHHHHHHHHhcCCCCCc
Q 047395           97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-------------------KYREAAMTEIDVLELLKRYDRSGSR  157 (432)
Q Consensus        97 y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-------------------~~~~~~~~E~~~l~~l~~~~~~~~~  157 (432)
                      +.+.++||+|+||+||+|++. +|+.||||+++...                   .......+|...+..+.+     .+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~   75 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG-----LA   75 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT-----SS
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccC-----CC
Confidence            468899999999999999974 68999999875311                   111233456666666655     66


Q ss_pred             eeEeecccccCCeEEEEEccCCC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeccCCCCcEEeecCCcc
Q 047395          158 CVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYL  236 (432)
Q Consensus       158 iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  236 (432)
                      ++..+++..    .+++|||+++ .+.         .++...+..++.||+.||.|||++||+||||||+|||++.    
T Consensus        76 v~~~~~~~~----~~lvme~~~~~~~~---------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~----  138 (191)
T d1zara2          76 VPKVYAWEG----NAVLMELIDAKELY---------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE----  138 (191)
T ss_dssp             SCCEEEEET----TEEEEECCCCEEGG---------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET----
T ss_pred             cceEEEecC----CEEEEEeecccccc---------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC----
Confidence            766655432    2799999944 331         2566667889999999999999999999999999999753    


Q ss_pred             ccCCcccccCCCCCccccccCCCCCCeEEeecCCcccccCCccccccCCCcchh--HH---HhCCCCCccchHHHHHHHH
Q 047395          237 KIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP--EV---ILGLGWSYPCDMWSVGCIL  311 (432)
Q Consensus       237 k~~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aP--E~---~~~~~~~~~sDiwSlGvil  311 (432)
                                              ..++|+|||.|.....+...     .|...  +.   +....|+.++|+||+.--+
T Consensus       139 ------------------------~~~~liDFG~a~~~~~~~~~-----~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         139 ------------------------EGIWIIDFPQSVEVGEEGWR-----EILERDVRNIITYFSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             ------------------------TEEEECCCTTCEETTSTTHH-----HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred             ------------------------CCEEEEECCCcccCCCCCcH-----HHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence                                    23788899988654332211     12111  10   1234678899999986443

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.33  E-value=1.2e-06  Score=77.03  Aligned_cols=86  Identities=10%  Similarity=0.072  Sum_probs=59.3

Q ss_pred             cCceEEEeeeecccceEEEEEEecCCCcEEEEEEeechh-hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395           94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus        94 ~~~y~i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ...|++.+..+-++.+.||+..  ..++.+++|+..... .....+.+|...+..+..    +-.+.+++.+...++..+
T Consensus        13 ~~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~----~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_          13 IEKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG----KLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HTTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT----TSCCCCEEEEEEETTEEE
T ss_pred             hhceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhc----cCCCCcEEEEEecCCceE
Confidence            3567777765555567899885  456778899875432 234457788888888753    123556667777778899


Q ss_pred             EEEccC-CCCHHHH
Q 047395          173 IVFEML-GPSLYDF  185 (432)
Q Consensus       173 lv~e~~-~~~L~~~  185 (432)
                      +||+++ |.++.+.
T Consensus        87 lv~~~l~G~~~~~~  100 (263)
T d1j7la_          87 LLMSEADGVLCSEE  100 (263)
T ss_dssp             EEEECCSSEEHHHH
T ss_pred             EEEEeccccccccc
Confidence            999999 7676554

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.92  E-value=4.3e-05  Score=71.05  Aligned_cols=76  Identities=18%  Similarity=0.116  Sum_probs=47.1

Q ss_pred             EeeeecccceEEEEEEecCCCcEEEEEEeechh--------hhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeE
Q 047395          100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHI  171 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~--------~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~  171 (432)
                      .+.||.|....||++.+..+++.|+||.-....        ...+....|.+.|..+....  ...+.+++.+.  ....
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~--p~~vP~v~~~d--~~~~  106 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHV--PHLVPRVFYSD--TEMA  106 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTC--GGGSCCEEEEE--TTTT
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhC--CCCcceEEEEc--CCCC
Confidence            457899999999999988888899999753211        11234567888888776431  12344555443  3345


Q ss_pred             EEEEccCC
Q 047395          172 CIVFEMLG  179 (432)
Q Consensus       172 ~lv~e~~~  179 (432)
                      ++|||+++
T Consensus       107 ~lvmE~L~  114 (392)
T d2pula1         107 VTVMEDLS  114 (392)
T ss_dssp             EEEECCCT
T ss_pred             EEEEeccC
Confidence            78999993

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.67  E-value=7.6e-05  Score=64.66  Aligned_cols=75  Identities=13%  Similarity=0.084  Sum_probs=51.5

Q ss_pred             eeecccc-eEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEEEEEccC-C
Q 047395          102 KIGEGTF-GQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-G  179 (432)
Q Consensus       102 ~lg~G~~-g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~  179 (432)
                      .+..|.. +.||+... ..+..+++|......  ...+..|...++.|.....   .+.+++.+...++..++||+++ |
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gv---pvP~v~~~~~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGV---PCAAVLDVVTEAGRDWLLLGEVPG   90 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTC---CBCCEEEEEECSSCEEEEEECCSS
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCC---CCCceeeecccccceEEEEEeeec
Confidence            3444543 67898874 456678999865432  3457789999998876432   3556666667778899999999 6


Q ss_pred             CCH
Q 047395          180 PSL  182 (432)
Q Consensus       180 ~~L  182 (432)
                      .++
T Consensus        91 ~~~   93 (255)
T d1nd4a_          91 QDL   93 (255)
T ss_dssp             EET
T ss_pred             ccc
Confidence            444

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.31  E-value=0.00055  Score=61.53  Aligned_cols=70  Identities=16%  Similarity=0.168  Sum_probs=47.5

Q ss_pred             eEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEee--cccccCCeEEEEEccCC
Q 047395          109 GQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIR--NWFDYRNHICIVFEMLG  179 (432)
Q Consensus       109 g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~--~~~~~~~~~~lv~e~~~  179 (432)
                      -.||++.. .+|+.|++|+.+......+.+..|...+..|.......+..+..-  ..+...+..+.++++++
T Consensus        36 N~vy~v~~-~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~  107 (325)
T d1zyla1          36 NRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG  107 (325)
T ss_dssp             SEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred             ceeEEEEc-CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecC
Confidence            58999874 568889999987665556778889999999987443222222211  12234567888999883

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.13  E-value=0.0012  Score=60.89  Aligned_cols=70  Identities=16%  Similarity=0.156  Sum_probs=47.6

Q ss_pred             EeeeecccceEEEEEEecC-------CCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCceeEeecccccCCeEE
Q 047395          100 LRKIGEGTFGQVLDCLDRE-------TGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHIC  172 (432)
Q Consensus       100 ~~~lg~G~~g~V~~a~~~~-------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~iv~~~~~~~~~~~~~  172 (432)
                      ++.|+-|-.-.+|++....       ..+.|.+++.-.. .......+|..+++.+.....    ..+++.++..    .
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~-~~~idr~~E~~i~~~ls~~gl----~Pkll~~~~~----g  117 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHL----GPKLYGIFSG----G  117 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTS----SSCEEEEETT----E
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc-chhhHHHHHHHHHHHHHhCCC----CCeEEEEcCC----c
Confidence            4678889999999997643       3467888887532 223346689999999887422    2355666543    5


Q ss_pred             EEEccC
Q 047395          173 IVFEML  178 (432)
Q Consensus       173 lv~e~~  178 (432)
                      +|+||+
T Consensus       118 ~I~efi  123 (395)
T d1nw1a_         118 RLEEYI  123 (395)
T ss_dssp             EEECCC
T ss_pred             eEEEEe
Confidence            788988

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.50  E-value=0.006  Score=54.07  Aligned_cols=56  Identities=9%  Similarity=0.003  Sum_probs=34.2

Q ss_pred             EEeeeecccceEEEEEEecCCCcEEEEEEeechhhhhHhHHHHHHHHHHHHhcCCCCCc
Q 047395           99 ILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR  157 (432)
Q Consensus        99 i~~~lg~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~  157 (432)
                      -.+.|..|---+.|+.... .| .+++|++... ...+.+..|++++..|.......|.
T Consensus        22 ~~~~i~~G~~N~ny~v~t~-~g-~yVLri~~~~-~~~~~l~~~~~~l~~L~~~g~pvp~   77 (316)
T d2ppqa1          22 SYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPL   77 (316)
T ss_dssp             EEEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EeecCCCCcccCeEEEEEC-CC-cEEEEEcCCC-CCHHHHHHHHHHHHhhhhccccccc
Confidence            3456667777889998643 34 5899998643 2345567788888888875444333