Citrus Sinensis ID: 047542

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Protein Sequence
MGTQSSPKPCLSESSSISATSQQQEAPNKQVAEVTEPIQTKSKFNILFNQNIAIDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPSYPWVPLWDRFGGHGKTVMNAQLAYDKMRLESVMEAQNGGVRAEFRNLNGSGMAAKRPNNDGGDRLKGNSSSQSNQHDDDSGLDLSLKL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccEEcccccccccccccccccccHHccccccccccEEccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccHcEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccEEEcc
Coil and Loop (DISEMBL)
mgtqsspkpclsesssisatsqqqeapnkqvaevtepiqtkskFNILFNqniaidnvsvTESEVELRLfsmggtsnpqanessshesirkkqpkqkgflcNFCNKIFStsqalgghqnaHKQERALAKRRKEmdmgalghhhypyypysssvahqnpnfygslfnrssplgvsmqpmirkpsypwvplwdrfgghgktVMNAQLAYDKMRLESVMEAqnggvraefrnlngsgmaakrpnndggdrlkgnsssqsnqhdddsgldlslkl
Flexible Loop (DISEMBL)
mgtqsspkpclsessSISATSQQQEAPNKQVAEVTEPIQTKSKFNILFNQNIAIDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFStsqalgghqnaHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPSYPWVPLWDRFGGHGKTVMNAQLAYDKMRLESVMEAQNGGVRaefrnlngsgmaakrpnndgGDRLKgnsssqsnqhdddsgldlslkl
Low Complexity Region (SEG)
MGTQsspkpclsesssisatsqqqeaPNKQVAEVTEPIQTKSKFNILFNQNIAIDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGhhhypyypysssVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPSYPWVPLWDRFGGHGKTVMNAQLAYDKMRLESVMEAQNGGVRAEFRNLNGSGMAAKRPNNDGGDRLKGnsssqsnqhdddsgldlslkl
Disordered region (IsUnstruct)
*****************************************SKFNILFNQNIAIDNVSVTESEVELRLF***************************GFLCNFCNKIFSTS**************************ALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPSYPWVPLWDRFGGHGKTVMNAQLAYDKMRL***********************************************************
Disordered Region (DISOPRED)
*************************************************************************************************FLCNFCNKIFSTSQALGGH****************************YYPYSSSVA**************************************************************************************************************LDLSLKL
Disordered Region (DISEMBL)
********************************EVTEPIQTKSKFNILFNQNIAIDNVSVTESEVELRLFSMGG********************KQKGFLCNFCNKIFSTSQ*****************RRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPSYPWVPLWDRFGGHGKTVMNAQLAYDKMRLESVMEAQNGGVRAEFRNLNGSGMAAKRPNNDGG***********************LKL
Disordered Region (DISPRO)
**********************************************************************************************QKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPSYPWVPLWDRFGGHGKTVMNAQLAYDKMRLESVMEAQNGGVRAEFRNLNGSGMAAK**NNDG********************LD*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGTQSSPKPCLSESSSISATSQQQEAPNKQVAEVTEPIQTKSKFNILFNQNIAIDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPSYPWVPLWDRFGGHGKTVMNAQLAYDKMRLESVMEAQNGGVRAEFRNLNGSGMAAKRPNNDGGDRLKGNSSSQSNQHDDDSGLDLSLKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	270	2.2.26 [Sep-21-2011]
Q39262	235	Zinc finger protein 3 OS=	no	no	0.511	0.587	0.337	1e-12
Q39266	209	Zinc finger protein 7 OS=	no	no	0.237	0.306	0.537	2e-11
Q42485	228	Zinc finger protein 1 OS=	no	no	0.296	0.350	0.410	7e-10
Q39263	260	Zinc finger protein 4 OS=	no	no	0.214	0.223	0.5	3e-08
Q39261	150	Zinc finger protein 2 OS=	no	no	0.133	0.24	0.638	3e-07
Q9FFX4	161	Zinc finger protein KNUCK	no	no	0.140	0.236	0.571	2e-06
Q39265	197	Zinc finger protein 6 OS=	no	no	0.207	0.284	0.421	2e-06
Q9SR34	172	Transcriptional regulator	no	no	0.174	0.273	0.361	0.0003
Q6S591	253	Zinc finger protein JAGGE	no	no	0.2	0.213	0.444	0.0006
Q39092	267	Zinc finger protein ZAT1	no	no	0.588	0.595	0.269	0.0006

>sp|Q39262|ZFP3_ARATH Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 25/163 (15%)

Query: 48  FNQNIAIDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIF 107
            NQ+I  +   V  S  EL L      +    NES++         +QK F CN+C + F
Sbjct: 18  LNQSIEDEERDVHNSSHELNLIDCIDDTTSIVNESTT-------STEQKLFSCNYCQRTF 70

Query: 108 STSQALGGHQNAHKQERALAKRRKEM--DMGALGHHHYPYYPYSSSVAHQNPNFYGSLFN 165
            +SQALGGHQNAHK+ER LAKR + M     A GH      PY  S     P  +   +N
Sbjct: 71  YSSQALGGHQNAHKRERTLAKRGQRMAASASAFGH------PYGFS-----PLPFHGQYN 119

Query: 166 RSSPLGVSMQPMIRKPSYPWVPLWDRFGGHGKTVMNAQLAYDK 208
               LG+    +  K S      ++ FGGH   +  ++L +D+
Sbjct: 120 NHRSLGIQAHSISHKLSS-----YNGFGGHYGQINWSRLPFDQ 157

Arabidopsis thaliana (taxid: 3702)

>sp|Q39266|ZFP7_ARATH Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 3/67 (4%)

Query: 90  KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGAL-GHHHYPYYPY 148
           K +   + F CN+C + F +SQALGGHQNAHK+ER +AKR   M MG + GHHH PY   
Sbjct: 51  KCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR--AMHMGRMFGHHHRPYTYT 108

Query: 149 SSSVAHQ 155
           SSS+  Q
Sbjct: 109 SSSLGMQ 115

Arabidopsis thaliana (taxid: 3702)

>sp|Q42485|ZFP1_ARATH Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1

 Score = 64.7 bits (156), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 15/95 (15%)

Query: 98  FLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG---------ALGHHHYPYYPY 148
           F CN+C + F +SQALGGHQNAHK+ER LAKR +   M          A GH     +  
Sbjct: 68  FSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFAS 127

Query: 149 SSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPSY 183
            +S+       +GS+ NRS+ LG+     I KPS+
Sbjct: 128 MASLP-----LHGSVNNRST-LGIQAHSTIHKPSF 156

Arabidopsis thaliana (taxid: 3702)

>sp|Q39263|ZFP4_ARATH Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2

 Score = 59.3 bits (142), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)

Query: 81  ESSSHESIRKKQPK--QKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGAL 138
           ESS+ E  +++QP   ++ F CN+C + F +SQALGGHQNAHK+ER LAKR   M +  +
Sbjct: 66  ESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGV 125

Arabidopsis thaliana (taxid: 3702)

>sp|Q39261|ZFP2_ARATH Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1

 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 29/36 (80%)

Query: 98  FLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEM 133
           F CN+C + F +SQALGGHQNAHK ER LAK+ +E+
Sbjct: 52  FSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREL 87

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 4/42 (9%)

Query: 98  FLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALG 139
           F C +C + F TSQALGGHQNAHK+ERA A+R    ++G L 
Sbjct: 38  FPCQYCPRKFYTSQALGGHQNAHKRERAAARR----NLGVLA 75

May function as a transcriptional repressor of cellular proliferation that regulates floral determinacy and relative size of basal pattern elements along the proximo-distal axis of the developing gynoecium.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39265|ZFP6_ARATH Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1

 Score = 52.8 bits (125), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 96  KGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSV 152
           + + C +C + F+ SQALGGHQNAHK+ER L KR + +    L  HH  ++P+++ +
Sbjct: 39  RKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHN-FHPHTNPL 94

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SR34|TAC1_ARATH Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 32/47 (68%)

Query: 84  SHESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR 130
           SH+ +     + + ++C+FC + FS +QALGGH N H+++RA  +++
Sbjct: 21  SHQGVDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQK 67

Activation factor which mediates telomerase activity and potentiates responses to auxin through the regulation of BT2. Binds in vitro to the DNA sequence 5'-GACAGTGTTAC-3' of the BT2 promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6S591|JAG_ARATH Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2 SV=1

 Score = 45.1 bits (105), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 9/63 (14%)

Query: 69  FSMGGTSNPQANESSSHESIRKKQPKQKG-------FLCNFCNKIFSTSQALGGHQNAHK 121
           FS  G  N QA E  S    RKK+  ++G       + C FC+  F  SQALGGH N H+
Sbjct: 17  FSKDG--NKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKFCKSQALGGHMNRHR 74

Query: 122 QER 124
           QER
Sbjct: 75  QER 77

Controls the morphogenesis of lateral organs. Functions in lateral organ shape and is sufficient to induce proliferation and growth of lateral organ tissue. Is necessary and sufficient for bract formation, but its expression is excluded from the cryptic bract, which could be a cause of bractless flowers in Arabidopsis. Participates with FIL and YAB3 in regulating valve margin development. Functions with JGL to define stamen and carpel shape. Functions with AS1 and AS2 in the sepal and petal primordia to repress boundary-specifying genes for normal development of the organs.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39092|ZAT1_ARATH Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 19/178 (10%)

Query: 3   TQSSPKPCLSESS----SISATSQQQ-----EAPNKQVAEVTEPIQTKSKFNILFNQNIA 53
           T+SS KP    S     SIS+   QQ     ++   + A++   +Q  S+         +
Sbjct: 58  TESSKKPSRKRSRLNRRSISSLRHQQSNEEGKSETARAADIKIGVQELSESCTEQEPMSS 117

Query: 54  IDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQAL 113
           + + + TE +V L L  +      +  E S  E  +KK  + K F C  C K+F + QAL
Sbjct: 118 VSDAATTEEDVALSLMLLSRDKWEKEEEESDEERWKKK--RNKWFECETCEKVFKSYQAL 175

Query: 114 GGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLG 171
           GGH+ +HK++ A      E D   LG          S+ +H        +F     LG
Sbjct: 176 GGHRASHKKKIA------ETDQ--LGSDELKKKKKKSTSSHHECPICAKVFTSGQALG 225

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	270
255569173	289	conserved hypothetical protein [Ricinus	0.911	0.851	0.4	7e-31
224142551	294	predicted protein [Populus trichocarpa]	0.918	0.843	0.389	1e-30
224120338	258	predicted protein [Populus trichocarpa]	0.840	0.879	0.417	1e-30
224073047	298	predicted protein [Populus trichocarpa]	0.918	0.832	0.369	2e-26
224096924	298	predicted protein [Populus trichocarpa]	0.918	0.832	0.366	5e-26
147769444	295	hypothetical protein VITISV_037013 [Viti	0.637	0.583	0.433	6e-24
147838400	467	hypothetical protein VITISV_006325 [Viti	0.574	0.331	0.447	6e-24
224142553	303	predicted protein [Populus trichocarpa]	0.722	0.643	0.389	2e-20
357503013	272	Zinc finger protein [Medicago truncatula	0.648	0.643	0.330	3e-16
357503017	264	Zinc finger protein [Medicago truncatula	0.644	0.659	0.333	4e-15

>gi|255569173|ref|XP_002525555.1| conserved hypothetical protein [Ricinus communis] gi|223535134|gb|EEF36814.1| conserved hypothetical protein [Ricinus communis]

 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 120/300 (40%), Positives = 163/300 (54%), Gaps = 54/300 (18%)

Query: 8   KPCLSESSSISATSQQQEAP------NKQVAEV-----TEPIQTKSKFNILFNQNIAIDN 56
           +PCLS++SSISA S+   AP       K V ++     T P   +     L +  ++ + 
Sbjct: 7   EPCLSDASSISAASEGATAPKVGSDHGKSVIDLRMKRETAPTAYEPNSRTLLDLKLSSEG 66

Query: 57  VSVTESEVELRLFSMGGTSNPQANESSSHE--SIRKKQPKQ-KGFLCNFCNKIFSTSQAL 113
            SV  S ++L LF      NP A+  SSHE  ++ +KQP++ + F CNFC + FSTSQAL
Sbjct: 67  -SVRGSRLDLNLF------NP-ASGGSSHEDQTVAEKQPERTRVFSCNFCKREFSTSQAL 118

Query: 114 GGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVS 173
           GGHQNAHKQER LAKRR  MD+GA G  HYPYYPYSS   H    FYGS+   S  LGV 
Sbjct: 119 GGHQNAHKQERQLAKRRHGMDLGAFG--HYPYYPYSSLSPHP---FYGSI---SRSLGVR 170

Query: 174 MQPMIRKP-SYPWVPLWDRFGG-----HG-----KTVMNAQLAYDKMRLESVMEAQNGGV 222
           M+ +I+KP S+PW+      G      HG     + +MN+Q + D++R ES+     GG+
Sbjct: 171 MESLIQKPSSFPWMSSSAGAGAAFRYSHGGWSRQQAMMNSQSSIDRLRAESLNTINGGGL 230

Query: 223 RA-----EFRNLNGSGMAAKRPNND-------GGDRLKGNSSSQSNQHDDDSGLDLSLKL 270
                  E RN     + A   +N+        GD L+    +  +Q  D  G+DLSLKL
Sbjct: 231 GTSPRFDENRNNTLPNVGASSSSNNLGIIKSSAGDNLRPAGRATGDQ-VDALGIDLSLKL 289

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142551|ref|XP_002324619.1| predicted protein [Populus trichocarpa] gi|222866053|gb|EEF03184.1| predicted protein [Populus trichocarpa]

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/311 (38%), Positives = 155/311 (49%), Gaps = 63/311 (20%)

Query: 2   GTQSSPKPCLSESSSISATSQ----------------QQEAPNKQVAEVTEP-IQTKSKF 44
           GT+ SP    SE SSISATS+                  +   ++ A  +EP +  +S  
Sbjct: 5   GTEKSP----SEGSSISATSEGTPHGDGGDLDQTKMDSTKKMKEKAARGSEPALLPESSA 60

Query: 45  NILFNQNIAIDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCN 104
            +L    ++ D  S      +  LFS     +  A ES+   S   +Q + + F CNFC 
Sbjct: 61  RVLLGLKLSSD--SSIRGSKQFNLFSPMSAGSSHAKESTDETS---RQTESRVFSCNFCK 115

Query: 105 KIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLF 164
           + FSTSQALGGHQNAHKQERALAKRR+EMD  ALG  H PYYPYSS     NP +YGSL 
Sbjct: 116 REFSTSQALGGHQNAHKQERALAKRRREMDASALG--HLPYYPYSS--LSTNP-YYGSL- 169

Query: 165 NRSSPLGVSMQPMIRKPS-YPWV-PLWDRFGGHG----KTVMNAQLAYDKMRLESVME-- 216
           NR+  LGV M   I K S Y W  P   R+G H     +T+MN Q + D++R ES+    
Sbjct: 170 NRA--LGVRMDSFIHKTSPYSWTSPGGHRYGAHSGWPRQTLMNTQPSIDRLRTESLNAFC 227

Query: 217 --------------AQNGGVRAEFR---NLNGSGMAAKRPNNDGGDRLKGNSSSQSNQHD 259
                           NG VR+ F    + N      K P  D   ++    S Q+    
Sbjct: 228 GGFGISTSSSSPRFDDNGIVRSSFGASPSSNNITAIRKPPVTDHIQQINPPKSDQT---- 283

Query: 260 DDSGLDLSLKL 270
           D+SGLDLSLKL
Sbjct: 284 DESGLDLSLKL 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120338|ref|XP_002331023.1| predicted protein [Populus trichocarpa] gi|222872953|gb|EEF10084.1| predicted protein [Populus trichocarpa]

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/266 (41%), Positives = 146/266 (54%), Gaps = 39/266 (14%)

Query: 29  KQVAEVTEP-IQTKSKFNILFNQNIAIDNVSVTESEVELRLFSMGGTSNPQANESSSHES 87
           ++V + +EP +  KS   +L +  ++ DN S+  S++E  L S     +  A ES++ E+
Sbjct: 8   EKVVQGSEPALLPKSSARVLLDLKLSRDN-SIRGSKLEFNLLSPMNVGSSHAKESTA-ET 65

Query: 88  IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGHHHYPYYP 147
           +  KQ + + F CNFC + FSTSQALGGHQNAHKQER LAKRR+EMD+GAL   H PYYP
Sbjct: 66  L--KQTESRVFPCNFCKREFSTSQALGGHQNAHKQERTLAKRRQEMDVGALV--HLPYYP 121

Query: 148 YSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRK--PSYPWV-PLWDRFGGH----GKTVM 200
           YSS     NP +YGSL NRS  LGV +  +I K  P YPW  P+  R+  H    G+T M
Sbjct: 122 YSS--LSTNP-YYGSL-NRS--LGVRLDSLIHKTSPPYPWTSPIGLRYDAHGGWSGQTTM 175

Query: 201 NAQLAYDKMRLESVMEAQNGGVRAE------------FRNLNGS----GMAAKRPNNDGG 244
           N Q +  K      + A +GG                 RN   S     +A  +P   G 
Sbjct: 176 NTQPSNGKSLTTESLNAFSGGFGISSSSSSSRFEDNLLRNFGSSPSSNTVAINKP--PGT 233

Query: 245 DRLKGNSSSQSNQHDDDSGLDLSLKL 270
           D  +     +S Q  DDSGLDLSLKL
Sbjct: 234 DHFQQTDHPKSYQ-TDDSGLDLSLKL 258

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224073047|ref|XP_002303956.1| predicted protein [Populus trichocarpa] gi|222841388|gb|EEE78935.1| predicted protein [Populus trichocarpa]

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/303 (36%), Positives = 160/303 (52%), Gaps = 55/303 (18%)

Query: 10  CLSESSSISATSQQQEAPN---------------KQVAEVTEPIQT--KSKFNILFNQNI 52
           C S +S+ISA S++    +               ++V   TEP+     S   +L +  +
Sbjct: 9   CPSRTSNISAASEETLCRHSGDHDQKNMINLKMKEKVVSGTEPLTLPDSSSSPVLLDLKL 68

Query: 53  AIDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQA 112
           + D+ S+  S++E  LFS     +  ANES   E++  K    + F C++C + FSTSQA
Sbjct: 69  SNDD-SLGGSKLEFNLFSPINAGSFHANESID-ETL--KLADSRVFSCSYCKREFSTSQA 124

Query: 113 LGGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGV 172
           LGGHQNAHKQERA+AKRR+ MD+ A G  H+PYYP S+   H    +YGS FNRS  LG+
Sbjct: 125 LGGHQNAHKQERAIAKRRQGMDVDAFG--HFPYYPCSNPSTHP---YYGS-FNRS--LGM 176

Query: 173 SMQPMIRKPSYPWVPLWD---RFGGHG---KTVMNAQ-LAYDKMRLESV--MEAQNGGVR 223
            M  +IRKPS           RFG  G   + +MNAQ  + D++R+ES+  +  + G   
Sbjct: 177 EMDSLIRKPSSYPWSTSSSGYRFGLGGWSRQAMMNAQPTSIDRLRMESLNSLNGRYGNST 236

Query: 224 AE-------------FRNLNGSG---MAAKRPNNDGGDRLKGNSSSQSNQHDDDSGLDLS 267
           A              FRN  GS    +A  +P+N   D+L+     +S+Q  +  GLDLS
Sbjct: 237 ASSSSSSRFEDINDLFRNFGGSSSSNIATNKPSNIDIDQLQLIEPPKSDQA-NPLGLDLS 295

Query: 268 LKL 270
           LKL
Sbjct: 296 LKL 298

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096924|ref|XP_002334654.1| predicted protein [Populus trichocarpa] gi|222874066|gb|EEF11197.1| predicted protein [Populus trichocarpa]

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/303 (36%), Positives = 159/303 (52%), Gaps = 55/303 (18%)

Query: 10  CLSESSSISATSQQQEAPN---------------KQVAEVTEPIQT--KSKFNILFNQNI 52
           C S +S+ISA S++    +               ++V   TEP+     S   +L +  +
Sbjct: 9   CPSRTSNISAASEETLCRHSGDHDQKNMINLKMKEKVVSGTEPLTLPDSSSSPVLLDLKL 68

Query: 53  AIDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQA 112
           + D+ S+  S++E  LFS     +  ANES   E++  K    + F C++C + FSTSQA
Sbjct: 69  SNDD-SLGGSKLEFNLFSPINAGSFHANESID-ETL--KPADSRVFSCSYCKREFSTSQA 124

Query: 113 LGGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGV 172
           LGGHQNAHKQERA+AKR + MD+ A G  H+PYYP S+   H    +YGS FNRS  LG+
Sbjct: 125 LGGHQNAHKQERAIAKRHQGMDVDAFG--HFPYYPCSNPSTHP---YYGS-FNRS--LGM 176

Query: 173 SMQPMIRKPSYPWVPLWD---RFGGHG---KTVMNAQ-LAYDKMRLESV--MEAQNGGVR 223
            M  +IRKPS           RFG  G   + +MNAQ  + D++R+ES+  +  + G   
Sbjct: 177 EMDSLIRKPSSYPWSTSSSGYRFGLGGWSRQAMMNAQPTSIDRLRMESLNSLNGRYGNST 236

Query: 224 AE-------------FRNLNGSG---MAAKRPNNDGGDRLKGNSSSQSNQHDDDSGLDLS 267
           A              FRN  GS    +A  +P+N   D+L+     +S+Q  +  GLDLS
Sbjct: 237 ASSSSSSRFEDINDLFRNFGGSSSSNIATNKPSNIDTDQLQLIEPPKSDQA-NPLGLDLS 295

Query: 268 LKL 270
           LKL
Sbjct: 296 LKL 298

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769444|emb|CAN72493.1| hypothetical protein VITISV_037013 [Vitis vinifera]

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/212 (43%), Positives = 115/212 (54%), Gaps = 40/212 (18%)

Query: 89  RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPY 148
           R+KQ  ++ F CNFC + FSTSQALGGHQNAHKQERA+AKRR+ MDM   GH H+ YY Y
Sbjct: 94  REKQSDRRVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMDMPGFGHPHFHYYTY 153

Query: 149 SSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPSYPWV---PLWDRFGGHG----KTVMN 201
            SS+ H     YGS FNRS  LGV M+ MI KP Y W+   P   +F GHG     T+M+
Sbjct: 154 -SSIPHV--PLYGS-FNRS--LGVRMESMIHKPPYSWMAPPPSGCQF-GHGGWLRPTMMS 206

Query: 202 AQLAYD-KMRLESVMEAQNGGVRAEF-------RNLNGSGMAAKRPNNDGGDRLKGNSSS 253
            Q +++ +MR E      +GG  + F         + GSG  A   +  GG    GN SS
Sbjct: 207 PQSSFEHRMRREDFQ--MHGGGSSGFGAPAGPSSTIEGSGGXAIS-SLVGGSNSNGNDSS 263

Query: 254 -------------QSNQHDDD--SGLDLSLKL 270
                        Q    +DD   GL+L L L
Sbjct: 264 ILANKTSGGDNPWQGGHKEDDQPGGLNLDLSL 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838400|emb|CAN74318.1| hypothetical protein VITISV_006325 [Vitis vinifera]

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/181 (44%), Positives = 107/181 (59%), Gaps = 26/181 (14%)

Query: 10  CLSESSSISATSQQQEAPNKQVAEVT--------EPIQTKSKFNILFNQNIAIDNVSVTE 61
           C SE SSISATS+     + + A+          E  +T++  N+L +  ++ D     +
Sbjct: 185 CPSEGSSISATSEGTPTKDGERAKKVKMKGKVSEEERKTETGSNLLLDLRLSND-----D 239

Query: 62  SEVELRLF-SMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAH 120
           S+V+L L  S+   S+P+         +R+KQP+++ F CNFC + FSTSQALGGHQNAH
Sbjct: 240 SKVDLNLCNSLRTASSPERTVM-----VREKQPERRVFSCNFCKREFSTSQALGGHQNAH 294

Query: 121 KQERALAKRRKEMDMGALGHHHYPY-YPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIR 179
           KQERA+AKRR+ MDM   GH H+ Y YPYSS         YGS FNRS  LGV M  MI 
Sbjct: 295 KQERAIAKRRQGMDMPGFGHPHFHYNYPYSSIPP---VPLYGS-FNRS--LGVRMDSMIH 348

Query: 180 K 180
           K
Sbjct: 349 K 349

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142553|ref|XP_002324620.1| predicted protein [Populus trichocarpa] gi|222866054|gb|EEF03185.1| predicted protein [Populus trichocarpa]

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 127/244 (52%), Gaps = 49/244 (20%)

Query: 58  SVTESEVELRLFS---MGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQALG 114
           S+  S++E  LFS   +G +S+  A ES    S +  +P+   F C+FC + FSTSQALG
Sbjct: 78  SIRGSKLEFNLFSPINVGYSSH--AKESMDEASKQSTEPRV--FSCSFCRRKFSTSQALG 133

Query: 115 GHQNAHKQERALAKRRKEMDMGA-LGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVS 173
           GHQNAHKQERALAK+R+  D+GA LG   +PY PYSS   +Q   +YGS FNR   +GV 
Sbjct: 134 GHQNAHKQERALAKKREGSDVGATLG--QFPYNPYSSLPTNQ---YYGS-FNRL--VGVR 185

Query: 174 MQPMI-RKPSYPWVPLWDRFGGHG----KTVMNAQLAYDKMRLESV-------------- 214
           M  +I +K  YPW        GHG    + +++ Q + D++R ES               
Sbjct: 186 MDSLIHKKQPYPWNSFGGYRHGHGGWSRQVLVSTQPSVDRLRAESSKAFSGVPFGNFSSP 245

Query: 215 -----MEAQNGGVRAEFRNLNG---SGMAAKRPNNDGGDRLKGNSSSQSNQHDDDSGLDL 266
                 E  NG     FRN      S +A   P +   D L+  +    +   D SGLDL
Sbjct: 246 SSSSRFEDHNG----LFRNPCASPSSNIAFNMPPST--DHLQRPNRPPKSDQTDGSGLDL 299

Query: 267 SLKL 270
           SLKL
Sbjct: 300 SLKL 303

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357503013|ref|XP_003621795.1| Zinc finger protein [Medicago truncatula] gi|355496810|gb|AES78013.1| Zinc finger protein [Medicago truncatula]

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 49/224 (21%)

Query: 12  SESSSISATSQQQEAPNKQVAEVT------EPIQTKSKFNILFNQNIAIDNVSVTESEVE 65
           S+S SISATSQ +   +    EV       +P ++        N N ++ +V +++ +V 
Sbjct: 3   SKSFSISATSQDEGGSSHTKEEVNMKENGDQPSKS--------NSNKSVGSVKLSKDDV- 53

Query: 66  LRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERA 125
                     +P +N+          + ++K F C++C   FST Q LGGHQNAHK ERA
Sbjct: 54  ---------VSPNSNDG---------KDEKKYFTCSYCKGQFSTFQGLGGHQNAHKAERA 95

Query: 126 LAKRRKE-MDMGALG---HHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKP 181
           L K+RKE  D GALG    H  PY+ YSS++     N+ G        LGV M+  I+KP
Sbjct: 96  LEKQRKERYDAGALGLGQSHFKPYFNYSSTLFTPYNNYRG--------LGVRMETTIQKP 147

Query: 182 SYP---WVPLWDRFGGHGKTVMNAQLAYDKMRLESVMEAQNGGV 222
           +Y    ++P    + G+G   +N  L        + +EA N GV
Sbjct: 148 TYTNPRFIPNGSGY-GYGSLRLNQMLHPSLFNFRNNIEASNTGV 190

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357503017|ref|XP_003621797.1| Zinc finger protein [Medicago truncatula] gi|355496812|gb|AES78015.1| Zinc finger protein [Medicago truncatula]

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 109/225 (48%), Gaps = 51/225 (22%)

Query: 12  SESSSISATSQQQ-------EAPNKQVAEVTEPIQTKSKFNILFNQNIAIDNVSVTESEV 64
           S+S SISATSQ +       E  N +  E  +P ++        N N ++ +V +++ +V
Sbjct: 3   SKSFSISATSQDEGDSSHTKEGVNMKANE-DQPSKS--------NSNKSVGSVKLSKDDV 53

Query: 65  ELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQER 124
                      +P +N+          + K+K F C++C   FST Q LGGHQNAHK ER
Sbjct: 54  ----------VSPNSNDG---------KDKKKYFTCSYCKGQFSTFQGLGGHQNAHKAER 94

Query: 125 ALAKRRKE-MDMGALG---HHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRK 180
           AL K+ KE  D GALG    H  PY  YSS++     N+ G        LGV M+  I+K
Sbjct: 95  ALEKQLKERYDAGALGLGQSHFKPYLNYSSTLFTPYNNYRG--------LGVRMETTIQK 146

Query: 181 PSYP---WVPLWDRFGGHGKTVMNAQLAYDKMRLESVMEAQNGGV 222
           P+Y    ++P    + G+G   +N  L        + +EA N GV
Sbjct: 147 PTYTNPRFIPTGSGY-GYGNLRLNQMLHPSLFNFRNNIEASNTGV 190

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	270
TAIR|locus:2181007	215	AT5G01860 "AT5G01860" [Arabido	0.374	0.469	0.435	7.7e-17
TAIR|locus:2025777	228	ZFP1 "AT1G80730" [Arabidopsis	0.444	0.526	0.343	9.1e-13
TAIR|locus:2013820	260	ZFP4 "AT1G66140" [Arabidopsis	0.362	0.376	0.403	1.5e-12
TAIR|locus:2146960	235	ZFP3 "AT5G25160" [Arabidopsis	0.514	0.591	0.325	8.2e-12
TAIR|locus:2144168	191	GIS2 "AT5G06650" [Arabidopsis	0.277	0.392	0.430	1.5e-10
TAIR|locus:2174547	150	ZFP2 "AT5G57520" [Arabidopsis	0.303	0.546	0.388	1.5e-10
TAIR|locus:2143300	278	AT5G27880 "AT5G27880" [Arabido	0.325	0.316	0.416	9.8e-10
TAIR|locus:2183780	272	AT5G10970 "AT5G10970" [Arabido	0.333	0.330	0.405	3.3e-09
TAIR|locus:2159088	161	KNU "AT5G14010" [Arabidopsis t	0.4	0.670	0.327	5.7e-08
TAIR|locus:2194599	211	ZFP5 "AT1G10480" [Arabidopsis	0.288	0.369	0.369	1.2e-07

TAIR|locus:2181007 AT5G01860 "AT5G01860" [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
 Identities = 51/117 (43%), Positives = 63/117 (53%)

Query:    85 HESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGXXXXX 144
             +ES  + + K + F C FC K FSTSQALGGHQNAHKQER+LAKRRKE+++         
Sbjct:    54 NESSTRNEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEIEIN-------- 105

Query:   145 XXXXXXXVAHQNPNFYGSLFNRSSP---LGVSMQPMIRKPS--YPWVPLWDRFGGHG 196
                    +  Q P   G  F+ SS    LGV   P I K +  YP+     RFG  G
Sbjct:   106 --YPELSIYSQYPPS-GLSFSSSSSQYDLGVRYNPNIAKTTKPYPFNIFACRFGYRG 159

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2025777 ZFP1 "AT1G80730" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 44/128 (34%), Positives = 68/128 (53%)

Query:    60 TESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNA 119
             T +  EL L     TS+   + +S H+  +++    + F CN+C + F +SQALGGHQNA
Sbjct:    33 TATSSELNLIDSFKTSS---SSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNA 89

Query:   120 HKQERALAKRRK--EMDMGALGXXXXXXXXXXXX--VAHQNPNFYGSLFNRSSPLGVSMQ 175
             HK+ER LAKR +  +M + +L                +  +   +GS+ NRS+ LG+   
Sbjct:    90 HKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRST-LGIQAH 148

Query:   176 PMIRKPSY 183
               I KPS+
Sbjct:   149 STIHKPSF 156

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009640 "photomorphogenesis" evidence=IEP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2013820 ZFP4 "AT1G66140" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 44/109 (40%), Positives = 60/109 (55%)

Query:    31 VAEVTEPIQTKSKFNILFNQNIAIDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRK 90
             V E  +PI      ++ FN N   +N+ +  S + L L S   +SNP+  +     S+ K
Sbjct:    27 VGEDYKPISLN--LSLSFNNNNN-NNLDLESSSLTLPLSSTSESSNPE-QQQQQQPSVSK 82

Query:    91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALG 139
             +      F CN+C + F +SQALGGHQNAHK+ER LAKR   M MG  G
Sbjct:    83 RV-----FSCNYCQRKFYSSQALGGHQNAHKRERTLAKRA--MRMGLAG 124

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2146960 ZFP3 "AT5G25160" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 52/160 (32%), Positives = 74/160 (46%)

Query:    49 NQNIAIDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFS 108
             NQ+I  +   V  S  EL L      +    NES++         +QK F CN+C + F 
Sbjct:    19 NQSIEDEERDVHNSSHELNLIDCIDDTTSIVNESTT-------STEQKLFSCNYCQRTFY 71

Query:   109 TSQALGGHQNAHKQERALAKRRKEMDMGALGXXXXXXXXXXXXVAHQNPNFYGSLFNRSS 168
             +SQALGGHQNAHK+ER LAKR + M   A                   P F+G  +N   
Sbjct:    72 SSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPL-------P-FHGQ-YNNHR 122

Query:   169 PLGVSMQPMIRKPSYPWVPLWDRFGGHGKTVMNAQLAYDK 208
              LG+    +  K S      ++ FGGH   +  ++L +D+
Sbjct:   123 SLGIQAHSISHKLSS-----YNGFGGHYGQINWSRLPFDQ 157

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2144168 GIS2 "AT5G06650" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 34/79 (43%), Positives = 48/79 (60%)

Query:    54 IDNVSVTESEVELRLFSMGGT---SNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTS 110
             +++ S  E  + L  F  G +   S  + N + ++ESI K   K+K F C++C + F TS
Sbjct:     9 VNSFSPKERPIRLFGFEFGASHEESESKDNYNENNESI-KDDNKEKRFKCHYCFRNFPTS 67

Query:   111 QALGGHQNAHKQERALAKR 129
             QALGGHQNAHK+ER   KR
Sbjct:    68 QALGGHQNAHKRERQQTKR 86

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009735 "response to cytokinin stimulus" evidence=IMP

GO:0009739 "response to gibberellin stimulus" evidence=IMP

GO:0010026 "trichome differentiation" evidence=IMP

TAIR|locus:2174547 ZFP2 "AT5G57520" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 33/85 (38%), Positives = 52/85 (61%)

Query:    49 NQNIAIDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFS 108
             N ++ +   S    ++ L L  +  +S   ++ SS++ S   +QP+   F CN+C + F 
Sbjct:     6 NTSLRLSLPSYKNHQLNLELV-LEPSSMSSSSSSSTNSSSCLEQPRV--FSCNYCQRKFY 62

Query:   109 TSQALGGHQNAHKQERALAKRRKEM 133
             +SQALGGHQNAHK ER LAK+ +E+
Sbjct:    63 SSQALGGHQNAHKLERTLAKKSREL 87

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2143300 AT5G27880 "AT5G27880" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 9.8e-10, P = 9.8e-10
 Identities = 40/96 (41%), Positives = 52/96 (54%)

Query:    41 KSKFNILFNQNIAIDNVSVTESEVELRLFSMGGTSNPQANESSSHESIRKKQPKQ--KGF 98
             KSK     N  + + +     SE  +   S G ++  +  E      I K  P +  K +
Sbjct:    27 KSKEKATRNTILKLGSPQEVTSERRIENSSFGSSAVRRGRE------IMKFYPSKSNKIY 80

Query:    99 LCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMD 134
              C+FC K FSTSQALGGHQNAHKQER   K+RKEM+
Sbjct:    81 TCHFCKKGFSTSQALGGHQNAHKQEREWDKKRKEME 116

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2183780 AT5G10970 "AT5G10970" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 3.3e-09, P = 3.3e-09
 Identities = 45/111 (40%), Positives = 54/111 (48%)

Query:    73 GTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKE 132
             G   P  N S+S E        QK F CN+C + F +SQALGGHQNAHK+ER LAKR + 
Sbjct:    87 GVVTPSFNGSTSTE--------QKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQR 138

Query:   133 M-DMGALGXXXXXXXXXXXXVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPS 182
             M    A G                 P F+G   NR+  LG+    M  KPS
Sbjct:   139 MASAAAFGHPYGFAPV---------P-FHGQYSNRT--LGIQAHSMSHKPS 177

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2159088 KNU "AT5G14010" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 5.7e-08, P = 5.7e-08
 Identities = 39/119 (32%), Positives = 55/119 (46%)

Query:    77 PQANESSS--HESIRKKQP-KQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEM 133
             P    SSS  H       P   + F C +C + F TSQALGGHQNAHK+ERA A+R    
Sbjct:    14 PAKTRSSSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR---- 69

Query:   134 DMGALGXXXXXXXXXXXXVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPSYPWVPLWDRF 192
             ++G L             +    P FY + F  S+      +P+  +P+   +  +D F
Sbjct:    70 NLGVLANSPPILDDNNTFL-RPYPCFYQNPFQGSTS---GNEPLQEQPTMMTMDGYDPF 124

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009909 "regulation of flower development" evidence=IMP

GO:0010582 "floral meristem determinacy" evidence=IMP

TAIR|locus:2194599 ZFP5 "AT1G10480" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
 Identities = 31/84 (36%), Positives = 47/84 (55%)

Query:    55 DNVSVTESEVELRLFS---MGGTSNPQAN--ESSSHESIRKKQPKQKGFLCNFCNKIFST 109
             ++ S + S+  ++LF    + G+  P+    ES S  +        K   C +C K F+ 
Sbjct:    12 ESSSGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFAN 71

Query:   110 SQALGGHQNAHKQERALAKRRKEM 133
             SQALGGHQNAHK+ER L K+R ++
Sbjct:    72 SQALGGHQNAHKKER-LKKKRLQL 94

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=IMP

GO:0010026 "trichome differentiation" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00181102 hypothetical protein (294 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	270
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	0.001

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 35.3 bits (82), Expect = 0.001
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 98  FLCNFCNKIFSTSQALGGHQNAHKQE 123
             C  C K FS+ QALGGH+ +H   
Sbjct: 2   HTCGVCGKTFSSLQALGGHKKSHCSL 27

Length = 27

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	270
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.08
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	98.99
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.98
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.59
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.59
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.46
PHA02768	55	hypothetical protein; Provisional	98.34
KOG3576	267	consensus Ovo and related transcription factors [T	98.13
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.0
KOG3576	267	consensus Ovo and related transcription factors [T	97.95
PHA00616	44	hypothetical protein	97.67
PHA00733	128	hypothetical protein	97.48
PHA00732	79	hypothetical protein	97.4
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	96.85
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.77
PHA00733	128	hypothetical protein	96.48
KOG3608	467	consensus Zn finger proteins [General function pre	96.3
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.14
PRK04860	160	hypothetical protein; Provisional	95.97
PLN03086	567	PRLI-interacting factor K; Provisional	95.95
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.78
PLN03086	567	PRLI-interacting factor K; Provisional	95.41
smart00355	26	ZnF_C2H2 zinc finger.	95.25
COG5189	423	SFP1 Putative transcriptional repressor regulating	95.02
KOG3993	500	consensus Transcription factor (contains Zn finger	94.66
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	93.7
KOG3608	467	consensus Zn finger proteins [General function pre	92.93
KOG3993	500	consensus Transcription factor (contains Zn finger	91.63
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	91.5
PHA02768	55	hypothetical protein; Provisional	91.05
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	91.01
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	89.88
PHA00732	79	hypothetical protein	84.35
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	84.02
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	83.92

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.08  E-value=8.8e-12  Score=114.23  Aligned_cols=39  Identities=26%  Similarity=0.429  Sum_probs=23.3

Q ss_pred             cccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      +++|.+|||.|.+..-|++|+|+|||||||.|..|+++|
T Consensus       187 ~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAF  225 (279)
T KOG2462|consen  187 PCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAF  225 (279)
T ss_pred             CcccccccccccchHHhhcccccccCCCCccCCcccchh
Confidence            555555666666555566666666666666666666555

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=98.99  E-value=9.7e-11  Score=107.43  Aligned_cols=55  Identities=18%  Similarity=0.304  Sum_probs=50.4

Q ss_pred             cccccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhccccC
Q 047542           86 ESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGH  140 (270)
Q Consensus        86 ~~~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~~~  140 (270)
                      .+.-|+|||||||.|..|+|+|..+++|+.|+++|.+.|.|+|.+|++.|+...-
T Consensus       204 QGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~Sy  258 (279)
T KOG2462|consen  204 QGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSY  258 (279)
T ss_pred             hcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHH
Confidence            4556789999999999999999999999999999999999999999999976543

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.98  E-value=9.7e-11  Score=118.45  Aligned_cols=49  Identities=20%  Similarity=0.415  Sum_probs=41.0

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcccc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALG  139 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~~  139 (270)
                      -|+|.|||+|.+|.|+|..+-.|+.|+|.|.|||||+|..|+++|++-|
T Consensus       916 EHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSG  964 (1007)
T KOG3623|consen  916 EHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSG  964 (1007)
T ss_pred             hhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhccccc
Confidence            5788888888888888888888888888888888888888888886644

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.59  E-value=2.5e-08  Score=102.55  Aligned_cols=88  Identities=20%  Similarity=0.243  Sum_probs=62.2

Q ss_pred             cccCCCCCcccCCchhhhhhhhhccCCcccccccccchhccccCCCCCc------cCCCCCCCCCCCCcccccccCCCCC
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGHHHYPY------YPYSSSVAHQNPNFYGSLFNRSSPL  170 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~~~~~~~~------~py~~~~~~~~p~~~G~~f~rs~~l  170 (270)
                      +++|.+|.|.|...++|..|.|.|||||||+|.+||.+|++.|++..||      ||+.-+++|+.+..-.. --++..+
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~~p~~~m~p~~~~e~l~~-~i~st~~  431 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREKYPHVQMNPHPVQEHLQY-VITSTGL  431 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeeccccCCccccCCCCchhhhcc-eeecccc
Confidence            4789999999999999999999999999999999999999888765554      56666666665543332 1122123


Q ss_pred             CccccCCcCCCCCCC
Q 047542          171 GVSMQPMIRKPSYPW  185 (270)
Q Consensus       171 gl~~hs~iHkp~~~~  185 (270)
                      +.-+--..||+..-|
T Consensus       432 p~g~~vpp~k~~~~~  446 (958)
T KOG1074|consen  432 PYGPSVPPEKAEEEA  446 (958)
T ss_pred             CCCCCCCCCCCcchh
Confidence            334444455544333

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.59  E-value=2.3e-08  Score=102.72  Aligned_cols=85  Identities=14%  Similarity=0.144  Sum_probs=66.4

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhccccCCCCCccCCCCCCCC------CCCCcccccccCCCC
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAH------QNPNFYGSLFNRSSP  169 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~~~~~~~~~py~~~~~~------~~p~~~G~~f~rs~~  169 (270)
                      .|-+|-+|.|...-.++|+-|.|+|+|||||+|+.||++|.+.|++..||--+...++.      |.-..|-+-|...  
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~--  681 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNA--  681 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccc--
Confidence            47889999999999999999999999999999999999999988876665222221211      1112566668777  


Q ss_pred             CCccccCCcCCCC
Q 047542          170 LGVSMQPMIRKPS  182 (270)
Q Consensus       170 lgl~~hs~iHkp~  182 (270)
                      +.+..|.+||.+.
T Consensus       682 V~lpQhIriH~~~  694 (958)
T KOG1074|consen  682 VTLPQHIRIHLGG  694 (958)
T ss_pred             ccccceEEeecCC
Confidence            9999999999854

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.46  E-value=5.4e-08  Score=98.95  Aligned_cols=46  Identities=22%  Similarity=0.372  Sum_probs=43.9

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhccccC
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGH  140 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~~~  140 (270)
                      .|.|+|.+|+|+|..+-.|+.|.|+|.|||||.|..|+++|++-|.
T Consensus       279 lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGS  324 (1007)
T KOG3623|consen  279 LRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGS  324 (1007)
T ss_pred             hccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCc
Confidence            4789999999999999999999999999999999999999988776

>PHA02768 hypothetical protein; Provisional

Probab=98.34  E-value=2e-07  Score=66.72  Aligned_cols=39  Identities=18%  Similarity=0.337  Sum_probs=35.8

Q ss_pred             cccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      -|+|+.||+.|...++|..|+++|+  ++|+|..|++.|..
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~   43 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLR   43 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecc
Confidence            4899999999999999999999999  79999999988764

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.13  E-value=1.9e-06  Score=76.83  Aligned_cols=78  Identities=18%  Similarity=0.322  Sum_probs=62.4

Q ss_pred             CCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc---ccCCCCCc---cCCCCCCCCCCCCcccccccC
Q 047542           93 PKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA---LGHHHYPY---YPYSSSVAHQNPNFYGSLFNR  166 (270)
Q Consensus        93 TgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~---~~~~~~~~---~py~~~~~~~~p~~~G~~f~r  166 (270)
                      .+...|.|.+|+|+|.....|.+|++.|..-|.|.|.-||+.|..   +..|.++|   .||.|       +.|+|+|.+
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc-------~~c~kaftq  185 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKC-------SLCEKAFTQ  185 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccch-------hhhhHHHHh
Confidence            345679999999999999999999999999999999999998842   33344444   57765       689999988


Q ss_pred             CCCCCccccC-CcC
Q 047542          167 SSPLGVSMQP-MIR  179 (270)
Q Consensus       167 s~~lgl~~hs-~iH  179 (270)
                      .  ..|..|. .||
T Consensus       186 r--csleshl~kvh  197 (267)
T KOG3576|consen  186 R--CSLESHLKKVH  197 (267)
T ss_pred             h--ccHHHHHHHHc
Confidence            8  8888886 355

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.00  E-value=2.2e-06  Score=52.11  Aligned_cols=25  Identities=16%  Similarity=0.147  Sum_probs=22.5

Q ss_pred             hhhhhhhhccCCcccccccccchhc
Q 047542          112 ALGGHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       112 aL~~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      +|..|+++|+++|||+|..|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4789999999999999999998874

...

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=97.95  E-value=1.6e-06  Score=77.32  Aligned_cols=90  Identities=21%  Similarity=0.235  Sum_probs=62.2

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc-------ccCCCC--CccCCCCC-CCCCCCCcc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA-------LGHHHY--PYYPYSSS-VAHQNPNFY  160 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~-------~~~~~~--~~~py~~~-~~~~~p~~~  160 (270)
                      -|...|.|.|.+|||.|..--.|.+|.|+|+|.|||+|..|+++|..       +...|-  +-|-|..- .....|+.|
T Consensus       139 ch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedc  218 (267)
T KOG3576|consen  139 CHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDC  218 (267)
T ss_pred             hccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeeccc
Confidence            36677889999999999999999999999999999999999999942       211110  11333221 122356789


Q ss_pred             cccccCCCCCCccccCCcCCCC
Q 047542          161 GSLFNRSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       161 G~~f~rs~~lgl~~hs~iHkp~  182 (270)
                      |-.-.  ++-..-.|...|.|.
T Consensus       219 g~t~~--~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  219 GYTSE--RPEVYYLHLKLHHPF  238 (267)
T ss_pred             CCCCC--ChhHHHHHHHhcCCC
Confidence            86332  235566677777654

>PHA00616 hypothetical protein

Probab=97.67  E-value=1.3e-05  Score=54.91  Aligned_cols=34  Identities=18%  Similarity=0.299  Sum_probs=32.3

Q ss_pred             cccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      ||.|..||+.|...+.|..|++.|++++++.|..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6899999999999999999999999999999874

>PHA00733 hypothetical protein

Probab=97.48  E-value=7.2e-05  Score=62.09  Aligned_cols=39  Identities=21%  Similarity=0.294  Sum_probs=22.1

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      .+||.|..|++.|.....|..|++.|  +++|.|..|++.|
T Consensus        71 ~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F  109 (128)
T PHA00733         71 VSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEF  109 (128)
T ss_pred             CCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCcc
Confidence            45556666666666666666565554  2345555555555

>PHA00732 hypothetical protein

Probab=97.40  E-value=8.4e-05  Score=56.91  Aligned_cols=43  Identities=23%  Similarity=0.233  Sum_probs=36.3

Q ss_pred             cccCCCCCcccCCchhhhhhhhh-ccCCcccccccccchhccccCCC
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNA-HKQERALAKRRKEMDMGALGHHH  142 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~-HtgEKPfkCr~c~~~~~~~~~~~  142 (270)
                      ||.|..|++.|.+...|..|++. |+   ++.|..|++.|..+..|.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~~l~~H~   44 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYRRLNQHF   44 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeCChhhhh
Confidence            68999999999999999999984 65   468999999997665543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=96.85  E-value=0.00029  Score=42.70  Aligned_cols=21  Identities=29%  Similarity=0.735  Sum_probs=18.4

Q ss_pred             ccccCCCCcccCCCCCcccCC
Q 047542           89 RKKQPKQKGFLCNFCNKIFST  109 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~s  109 (270)
                      .++|++++||.|++|++.|.+
T Consensus         6 ~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    6 MRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHSSSSSEEESSSSEEESS
T ss_pred             hhhcCCCCCCCCCCCcCeeCc
Confidence            357999999999999999963

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.77  E-value=0.00046  Score=39.95  Aligned_cols=23  Identities=35%  Similarity=0.742  Sum_probs=21.5

Q ss_pred             ccCCCCCcccCCchhhhhhhhhc
Q 047542           98 FLCNFCNKIFSTSQALGGHQNAH  120 (270)
Q Consensus        98 f~C~~CgKsF~sssaL~~Hqr~H  120 (270)
                      |.|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00733 hypothetical protein

Probab=96.48  E-value=0.00034  Score=58.06  Aligned_cols=79  Identities=11%  Similarity=0.017  Sum_probs=52.9

Q ss_pred             CCCcccCCCCCcccCCchhhhhh--hh---hccCCcccccccccchhccccCCCCCccCCCCCCCCCCCCcccccccCCC
Q 047542           94 KQKGFLCNFCNKIFSTSQALGGH--QN---AHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSS  168 (270)
Q Consensus        94 geKpf~C~~CgKsF~sssaL~~H--qr---~HtgEKPfkCr~c~~~~~~~~~~~~~~~py~~~~~~~~p~~~G~~f~rs~  168 (270)
                      ..+++.|.+|.+.|.....|..|  .+   .+.+++||.|..|++.|........+.. +.. . ...|..||++|.+. 
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r-~h~-~-~~~C~~CgK~F~~~-  112 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIR-YTE-H-SKVCPVCGKEFRNT-  112 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHh-cCC-c-CccCCCCCCccCCH-
Confidence            46789999999999888877766  21   2345899999999999865433211111 100 1 12456999999887 


Q ss_pred             CCCccccCC
Q 047542          169 PLGVSMQPM  177 (270)
Q Consensus       169 ~lgl~~hs~  177 (270)
                       ..++.|..
T Consensus       113 -~sL~~H~~  120 (128)
T PHA00733        113 -DSTLDHVC  120 (128)
T ss_pred             -HHHHHHHH
Confidence             66666654

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=96.30  E-value=0.00069  Score=64.91  Aligned_cols=96  Identities=17%  Similarity=0.300  Sum_probs=67.4

Q ss_pred             cccccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc--ccchhccccCCCCCc---------cCCCCCCCC
Q 047542           86 ESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR--KEMDMGALGHHHYPY---------YPYSSSVAH  154 (270)
Q Consensus        86 ~~~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~--c~~~~~~~~~~~~~~---------~py~~~~~~  154 (270)
                      ..++-.|...|||+|+.|.+.|...+.|.+|..+|. +-.|+|..  |-..|+.+.+..+||         .+|.|    
T Consensus       281 ~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~C----  355 (467)
T KOG3608|consen  281 THIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYAC----  355 (467)
T ss_pred             HHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceee----
Confidence            334446888999999999999999999999998888 67799987  888776655544443         23433    


Q ss_pred             CCCCcccccccCCCCCCccccCCcCCCCCCCCCCCCCC
Q 047542          155 QNPNFYGSLFNRSSPLGVSMQPMIRKPSYPWVPLWDRF  192 (270)
Q Consensus       155 ~~p~~~G~~f~rs~~lgl~~hs~iHkp~~~~~~~~~~~  192 (270)
                         -.|.+-|.+-  ..|.+|.|-.. -+-||+.-.||
T Consensus       356 ---H~Cdr~ft~G--~~L~~HL~kkH-~f~~PsGh~RF  387 (467)
T KOG3608|consen  356 ---HCCDRFFTSG--KSLSAHLMKKH-GFRLPSGHKRF  387 (467)
T ss_pred             ---ecchhhhccc--hhHHHHHHHhh-cccCCCCCCce
Confidence               3688867655  77888876433 24466543333

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.14  E-value=0.002  Score=38.65  Aligned_cols=25  Identities=40%  Similarity=0.699  Sum_probs=23.2

Q ss_pred             cccCCCCCcccCCchhhhhhhhhcc
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      ||.|..|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998874

>PRK04860 hypothetical protein; Provisional

Probab=95.97  E-value=0.0036  Score=54.00  Aligned_cols=37  Identities=16%  Similarity=0.292  Sum_probs=32.8

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      -+|.|. |++   ....+.+|.++|+++++|.|+.|+..|.
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            479998 987   6677899999999999999999998764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=95.95  E-value=0.0038  Score=63.45  Aligned_cols=84  Identities=15%  Similarity=0.198  Sum_probs=53.8

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhc--cccCCCCCccCCCCCCCCCCCCcccccccCC-----
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG--ALGHHHYPYYPYSSSVAHQNPNFYGSLFNRS-----  167 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~--~~~~~~~~~~py~~~~~~~~p~~~G~~f~rs-----  167 (270)
                      ++.+.|.+|++.|. ...|..|+++|+  +++.|. |++.+.  .+..|...+.|..    ...|.+|+..|.+.     
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~~R~~L~~H~~thCp~K----pi~C~fC~~~v~~g~~~~d  522 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVLEKEQMVQHQASTCPLR----LITCRFCGDMVQAGGSAMD  522 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCcchhHHHhhhhccCCCC----ceeCCCCCCccccCccccc
Confidence            34578999999996 577999999874  899999 986542  2333333333321    12456899877421     


Q ss_pred             ---CCCCccccCCcCCCCCCCCC
Q 047542          168 ---SPLGVSMQPMIRKPSYPWVP  187 (270)
Q Consensus       168 ---~~lgl~~hs~iHkp~~~~~~  187 (270)
                         ...+|..|..++ +..+..+
T Consensus       523 ~~d~~s~Lt~HE~~C-G~rt~~C  544 (567)
T PLN03086        523 VRDRLRGMSEHESIC-GSRTAPC  544 (567)
T ss_pred             hhhhhhhHHHHHHhc-CCcceEc
Confidence               114788888876 5555443

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.78  E-value=0.0042  Score=35.35  Aligned_cols=23  Identities=35%  Similarity=0.765  Sum_probs=19.4

Q ss_pred             ccCCCCCcccCCchhhhhhhhhc
Q 047542           98 FLCNFCNKIFSTSQALGGHQNAH  120 (270)
Q Consensus        98 f~C~~CgKsF~sssaL~~Hqr~H  120 (270)
                      |.|++|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999876

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=95.41  E-value=0.0071  Score=61.47  Aligned_cols=38  Identities=16%  Similarity=0.238  Sum_probs=34.5

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      +++.|. |++.+ .+..|..|++.|..+|++.|+.|++.+
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v  514 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMV  514 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCcc
Confidence            789999 99765 668999999999999999999999887

>smart00355 ZnF_C2H2 zinc finger

Probab=95.25  E-value=0.011  Score=33.74  Aligned_cols=24  Identities=33%  Similarity=0.728  Sum_probs=21.9

Q ss_pred             ccCCCCCcccCCchhhhhhhhhcc
Q 047542           98 FLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        98 f~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998775

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=95.02  E-value=0.034  Score=52.97  Aligned_cols=25  Identities=28%  Similarity=0.523  Sum_probs=21.4

Q ss_pred             CCCcccCCC--CCcccCCchhhhhhhh
Q 047542           94 KQKGFLCNF--CNKIFSTSQALGGHQN  118 (270)
Q Consensus        94 geKpf~C~~--CgKsF~sssaL~~Hqr  118 (270)
                      ++|||+|++  |.|++...-.|+-|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhh
Confidence            359999987  9999999999888854

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=94.66  E-value=0.0024  Score=62.39  Aligned_cols=83  Identities=13%  Similarity=0.213  Sum_probs=54.7

Q ss_pred             cccCCCCCcccCCchhhhhhhhhccCCcccccccccchhc---cccCCCCCccCCCCC----------------------
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG---ALGHHHYPYYPYSSS----------------------  151 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~---~~~~~~~~~~py~~~----------------------  151 (270)
                      -|.|..|...|...-.|.+|+-...-.--|+|.+|++.|.   .|..|.+-|+|-.-.                      
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            3778888888888888888854333333588888888873   355554444442111                      


Q ss_pred             -------CCCCCCCcccccccCCCCCCccccCCcCCC
Q 047542          152 -------VAHQNPNFYGSLFNRSSPLGVSMQPMIRKP  181 (270)
Q Consensus       152 -------~~~~~p~~~G~~f~rs~~lgl~~hs~iHkp  181 (270)
                             .....|-+|||.|.|.  .=||.|+..|.-
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRq--AYLrKHqlthq~  381 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQ--AYLRKHQLTHQR  381 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHH--HHHHHhHHhhhc
Confidence                   1123456999999998  779999888743

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.70  E-value=0.046  Score=38.75  Aligned_cols=35  Identities=17%  Similarity=0.392  Sum_probs=25.1

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCcc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERA  125 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKP  125 (270)
                      .+..+.|..|++|+..+.+..+|.+|+.++.+.||
T Consensus        18 ~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   18 KSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34567899999999999999999999988877765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=92.93  E-value=0.0082  Score=57.74  Aligned_cols=48  Identities=15%  Similarity=0.290  Sum_probs=36.5

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhcc--CCcccccccccchhcc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHK--QERALAKRRKEMDMGA  137 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~Ht--gEKPfkCr~c~~~~~~  137 (270)
                      +.|+++|...|..|++-|.+...|-.|.+..+  ...+|+|..|-++|++
T Consensus       200 r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaT  249 (467)
T KOG3608|consen  200 RTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFAT  249 (467)
T ss_pred             HhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhH
Confidence            46888888888888888888888888866544  3457888888887743

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=91.63  E-value=0.057  Score=53.06  Aligned_cols=25  Identities=36%  Similarity=0.743  Sum_probs=23.4

Q ss_pred             cccCCCCCcccCCchhhhhhhhhcc
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      -|+|.+|+|.|.-..+|..|+|-|+
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccC
Confidence            4899999999999999999999885

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=91.50  E-value=0.061  Score=31.43  Aligned_cols=23  Identities=39%  Similarity=0.862  Sum_probs=20.8

Q ss_pred             ccCCCCCcccCCchhhhhhhhhc
Q 047542           98 FLCNFCNKIFSTSQALGGHQNAH  120 (270)
Q Consensus        98 f~C~~CgKsF~sssaL~~Hqr~H  120 (270)
                      |.|..|.+.|.....|..|.+.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999998764

>PHA02768 hypothetical protein; Provisional

Probab=91.05  E-value=0.052  Score=38.94  Aligned_cols=35  Identities=6%  Similarity=-0.251  Sum_probs=18.8

Q ss_pred             cccccccchhc---cccCCCCCcc-CCCCCCCCCCCCcccccccCC
Q 047542          126 LAKRRKEMDMG---ALGHHHYPYY-PYSSSVAHQNPNFYGSLFNRS  167 (270)
Q Consensus       126 fkCr~c~~~~~---~~~~~~~~~~-py~~~~~~~~p~~~G~~f~rs  167 (270)
                      |+|.+||+.|.   ++..|++.|. ||.+       ..||++|.+.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~k~~kc-------~~C~k~f~~~   44 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHNTNLKL-------SNCKRISLRT   44 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcCCcccC-------Ccccceeccc
Confidence            67777777763   3444444332 4432       3666666554

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=91.01  E-value=0.19  Score=35.27  Aligned_cols=39  Identities=21%  Similarity=0.377  Sum_probs=29.7

Q ss_pred             cccCCCCCcccCCchhhhhhhh-hccCC-cccccccccchhc
Q 047542           97 GFLCNFCNKIFSTSQALGGHQN-AHKQE-RALAKRRKEMDMG  136 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr-~HtgE-KPfkCr~c~~~~~  136 (270)
                      .|.|++|++. .....|..|.. .|..+ +.+.|..|...+.
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~   42 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT   42 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh
Confidence            4899999995 55688999955 46654 5799999986543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=89.88  E-value=0.14  Score=30.75  Aligned_cols=22  Identities=36%  Similarity=0.830  Sum_probs=20.2

Q ss_pred             ccCCCCCcccCCchhhhhhhhh
Q 047542           98 FLCNFCNKIFSTSQALGGHQNA  119 (270)
Q Consensus        98 f~C~~CgKsF~sssaL~~Hqr~  119 (270)
                      |.|..|++.|.....+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999865

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PHA00732 hypothetical protein

Probab=84.35  E-value=0.45  Score=36.38  Aligned_cols=43  Identities=7%  Similarity=-0.065  Sum_probs=29.0

Q ss_pred             ccccccccchhcc---ccCCCC-CccCCCCCCCCCCCCcccccccCCCCCCccccCCcC
Q 047542          125 ALAKRRKEMDMGA---LGHHHY-PYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIR  179 (270)
Q Consensus       125 PfkCr~c~~~~~~---~~~~~~-~~~py~~~~~~~~p~~~G~~f~rs~~lgl~~hs~iH  179 (270)
                      ||+|..|++.|..   +..|.. ++.++       .|..||+.|.+     +.+|.+.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~~-------~C~~CgKsF~~-----l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTLT-------KCPVCNKSYRR-----LNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCCC-------ccCCCCCEeCC-----hhhhhccc
Confidence            6899999999854   333333 33444       35699998863     67788665

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=84.02  E-value=0.61  Score=27.94  Aligned_cols=21  Identities=24%  Similarity=0.634  Sum_probs=17.3

Q ss_pred             ccCCCCCcccCCchhhhhhhhh
Q 047542           98 FLCNFCNKIFSTSQALGGHQNA  119 (270)
Q Consensus        98 f~C~~CgKsF~sssaL~~Hqr~  119 (270)
                      ..|..|++.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4699999999 56778999764

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=83.92  E-value=0.48  Score=27.43  Aligned_cols=22  Identities=27%  Similarity=0.523  Sum_probs=17.2

Q ss_pred             ccCCCCCcccCCchhhhhhhhhc
Q 047542           98 FLCNFCNKIFSTSQALGGHQNAH  120 (270)
Q Consensus        98 f~C~~CgKsF~sssaL~~Hqr~H  120 (270)
                      |.|..|..... ...|..|++.|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            68999998887 88999998875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	270
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	2e-14
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	1e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 64.8 bits (158), Expect = 2e-14
 Identities = 14/33 (42%), Positives = 24/33 (72%)

Query: 96  KGFLCNFCNKIFSTSQALGGHQNAHKQERALAK 128
           + + C+FC + F ++QALGGH N H+++RA  +
Sbjct: 5   RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 37

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 42.5 bits (99), Expect = 1e-04
 Identities = 17/122 (13%), Positives = 36/122 (29%), Gaps = 5/122 (4%)

Query: 3   TQSSPKPCLSESSSISATSQQQEAPNKQVAEVTEPIQTKSKFNILFNQNIAIDNVSVTES 62
            + + +  L    S +   +  EA  KQ  +  +     +  +   N    +      ++
Sbjct: 83  KKGNTRGDLVNEHSEA-KDEADEATQKQAKDTDKSKAQVTYSDTGINNANELSRSGNVDN 141

Query: 63  EVELRLFSMGGTSNPQANESSSHESIR----KKQPKQKGFLCNFCNKIFSTSQALGGHQN 118
           E       M        +   S    R           G+ C+ C+ +  +   L  H  
Sbjct: 142 EGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVA 201

Query: 119 AH 120
           +H
Sbjct: 202 SH 203

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 10/48 (20%), Positives = 14/48 (29%)

Query: 73  GTSNPQANESSSHESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAH 120
           G+S           S +     Q       C++ FST   L  H    
Sbjct: 1   GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME 48

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 7e-04
 Identities = 32/237 (13%), Positives = 66/237 (27%), Gaps = 66/237 (27%)

Query: 15  SSISATSQQQEAPNKQVAEVTEPIQTKSKFNILFNQNIAIDNVSVTESEVELR------- 67
           S I    +Q     +   E  + +          NQ  A  NVS  +  ++LR       
Sbjct: 96  SPIKTEQRQPSMMTRMYIEQRDRLYND-------NQVFAKYNVSRLQPYLKLRQALLELR 148

Query: 68  ------LFSMGGTSNPQANESS-SHESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAH 120
                 +  + G     + ++  + +             C    KIF  +  L    N +
Sbjct: 149 PAKNVLIDGVLG-----SGKTWVALDVCL-----SYKVQCKMDFKIFWLN--LK---NCN 193

Query: 121 KQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRK 180
             E  L     EM +  L +   P +           +   ++  R   +   ++ +++ 
Sbjct: 194 SPETVL-----EM-LQKLLYQIDPNW-------TSRSDHSSNIKLRIHSIQAELRRLLKS 240

Query: 181 PSYP---------WVP-LWDRFGGHGKTVMNAQLAYDKMRLESVMEAQNGGVRAEFR 227
             Y               W+ F    K ++         R + V +  +        
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNLSCKILLTT-------RFKQVTDFLSAATTTHIS 290

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	270
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.35
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.26
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.22
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.21
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.21
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.14
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.1
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.03
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.03
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.02
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.01
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.01
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.99
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.98
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.98
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.97
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.97
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.97
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.96
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.95
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.95
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.95
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.94
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.94
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.93
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.93
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.93
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	98.92
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.92
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.92
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.92
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.91
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.91
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.88
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.88
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.87
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.87
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.86
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.86
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.85
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.84
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.84
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.83
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.82
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.81
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.81
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.8
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.79
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.78
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.76
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.74
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.74
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.74
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.74
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.74
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.73
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.73
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.71
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.71
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.71
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.7
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.68
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.61
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.59
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.59
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.58
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	98.57
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.57
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.56
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.54
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.54
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.53
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.52
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.51
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.51
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.51
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.48
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.48
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.44
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.43
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	98.43
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.42
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.41
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.37
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.33
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.32
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.31
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.26
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.24
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.24
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.22
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.17
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.16
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.13
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.12
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.1
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.1
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.08
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.07
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.07
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.05
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.04
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.04
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.04
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.04
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.26
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.25
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.98
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	97.97
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.96
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	97.96
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	97.89
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.88
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.87
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.86
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	97.86
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	97.84
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.81
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.8
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	97.78
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	97.68
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.83
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.64
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	97.64
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	97.63
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	97.62
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.45
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	97.39
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	97.37
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	97.32
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	97.27
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	97.26
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	97.19
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	97.19
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.16
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.15
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	97.15
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.14
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.13
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.12
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.11
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.1
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.09
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	97.09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	97.07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	97.05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	97.04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	97.03
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.02
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.02
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	97.02
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.02
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.02
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.02
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.02
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.01
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.01
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.01
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.01
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.0
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.0
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.0
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.99
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.99
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	96.99
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.97
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	96.95
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.95
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	96.95
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.94
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.94
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.94
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.94
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.94
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.93
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.91
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.91
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.9
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	96.89
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.89
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.88
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	96.88
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.88
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.86
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.85
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.83
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.83
2epa_A	72	Krueppel-like factor 10; transforming growth facto	96.82
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.82
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.82
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.81
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.81
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.8
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.79
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	96.79
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.79
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	96.79
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.78
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	96.78
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.76
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.75
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.73
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.71
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.7
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.7
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.68
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.64
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.64
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.62
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.61
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.6
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	96.53
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.48
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	96.46
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.45
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	96.45
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.35
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.34
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	96.33
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	96.3
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	96.15
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	96.08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.05
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.93
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.78
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	95.75
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.75
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	95.74
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	95.69
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.57
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	95.46
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	95.45
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.44
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	95.3
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	95.22
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	95.19
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	94.71
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	94.58
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	94.39
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.19
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	93.92
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	93.91
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.85
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.52
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.12
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	92.27
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.85
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	89.32
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	88.94
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	88.16
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	87.37
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	86.43
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	85.74
1paa_A	30	Yeast transcription factor ADR1; transcription reg	85.63
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	83.22

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.35  E-value=1e-13  Score=98.93  Aligned_cols=41  Identities=27%  Similarity=0.514  Sum_probs=37.9

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      ||||.|.+|++.|.....|..|+++|+++|||+|.+|++.|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F   42 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCF   42 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEE
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCc
Confidence            79999999999999999999999999999999998766554

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.26  E-value=3.4e-14  Score=115.81  Aligned_cols=87  Identities=16%  Similarity=0.106  Sum_probs=72.3

Q ss_pred             ccccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc---ccCCCCCc---cCCCCCCCCCCCCcc
Q 047542           87 SIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA---LGHHHYPY---YPYSSSVAHQNPNFY  160 (270)
Q Consensus        87 ~~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~---~~~~~~~~---~py~~~~~~~~p~~~  160 (270)
                      ...++|.|+++|.|.+|++.|.....|..|+++|++++||+|..|++.|..   |..|...|   .||.       |..|
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~-------C~~C   84 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQ-------CLAC   84 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEE-------ESSS
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCcccc-------CCCC
Confidence            345678999999999999999999999999999999999999999999954   33333333   3554       4589


Q ss_pred             cccccCCCCCCccccCCcCCCC
Q 047542          161 GSLFNRSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       161 G~~f~rs~~lgl~~hs~iHkp~  182 (270)
                      |+.|.+.  ..|+.|.++|.+.
T Consensus        85 ~k~F~~~--~~L~~H~~~hh~~  104 (133)
T 2lt7_A           85 GKSFINY--QFMSSHIKSVHSQ  104 (133)
T ss_dssp             CCEESSH--HHHHHHHHHHTCC
T ss_pred             CCCcCCH--HHHHHHhHHhcCC
Confidence            9999998  9999999988654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.22  E-value=2.6e-12  Score=97.76  Aligned_cols=84  Identities=23%  Similarity=0.379  Sum_probs=68.6

Q ss_pred             cCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc---ccCCCCCc---cCCCCCCCCCCCCccccccc
Q 047542           92 QPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA---LGHHHYPY---YPYSSSVAHQNPNFYGSLFN  165 (270)
Q Consensus        92 HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~---~~~~~~~~---~py~~~~~~~~p~~~G~~f~  165 (270)
                      ...+++|.|.+|++.|.....|..|+++|.++++|+|..|++.|..   |..|...+   .+|.       |..|++.|.
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-------C~~C~~~f~   84 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK-------CQECGKGFC   84 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTS-------CSSSCCCCS
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeE-------CCCcCCccc
Confidence            4567899999999999999999999999999999999999999854   33332222   3444       458999999


Q ss_pred             CCCCCCccccCCcCCCCCC
Q 047542          166 RSSPLGVSMQPMIRKPSYP  184 (270)
Q Consensus       166 rs~~lgl~~hs~iHkp~~~  184 (270)
                      +.  ..|+.|.++|....+
T Consensus        85 ~~--~~L~~H~~~H~~~~~  101 (106)
T 2ee8_A           85 QS--RTLAVHKTLHMQTSS  101 (106)
T ss_dssp             SH--HHHHHHHHHTTSCCC
T ss_pred             CH--HHHHHHHHHhCCCCC
Confidence            88  899999999987643

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1.1e-11  Score=95.86  Aligned_cols=94  Identities=13%  Similarity=0.069  Sum_probs=70.7

Q ss_pred             cccccccCCCCcccCCCCCcccCCchhhhhhhhh--ccCCcccc-cccccchh--ccccCCCCCccCCCCCCCCCCCCcc
Q 047542           86 ESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNA--HKQERALA-KRRKEMDM--GALGHHHYPYYPYSSSVAHQNPNFY  160 (270)
Q Consensus        86 ~~~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~--HtgEKPfk-Cr~c~~~~--~~~~~~~~~~~py~~~~~~~~p~~~  160 (270)
                      ....++|+++++|.|.+|++.|.....|..|+++  |.+++++. |..|++.|  ........|...+....++ .|..|
T Consensus         8 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~-~C~~C   86 (115)
T 2dmi_A            8 KLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL-KCMYC   86 (115)
T ss_dssp             CCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC-BCSSS
T ss_pred             hhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce-ECCCC
Confidence            4455789999999999999999999999999999  88888765 99999888  4433332232222221221 34689


Q ss_pred             cccccCCCCCCccccCCcCCCC
Q 047542          161 GSLFNRSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       161 G~~f~rs~~lgl~~hs~iHkp~  182 (270)
                      |+.|.+.  ..|+.|.++|...
T Consensus        87 ~k~f~~~--~~L~~H~~~hh~~  106 (115)
T 2dmi_A           87 GHSFESL--QDLSVHMIKTKHY  106 (115)
T ss_dssp             CCBCSSH--HHHHHHHHHTTTT
T ss_pred             CCccCCH--HHHHHHHHHhCCc
Confidence            9999988  8999999988665

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.21  E-value=7.5e-13  Score=101.55  Aligned_cols=89  Identities=11%  Similarity=0.086  Sum_probs=70.9

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc---ccCCCCCc--cCCCCCCCCCCCCcccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA---LGHHHYPY--YPYSSSVAHQNPNFYGS  162 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~---~~~~~~~~--~py~~~~~~~~p~~~G~  162 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|  +++|+|..|++.|..   |..|..+.  .||.       |..|++
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~-------C~~C~~   77 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLT-------CLECMR   77 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHHHCSTGGGE-------EGGGTE
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHHcCCCCCcc-------Cccccc
Confidence            346789999999999999999999999999999  589999999999854   22222211  3444       458999


Q ss_pred             cccCCCCCCccccCC-cCCCCCCCCC
Q 047542          163 LFNRSSPLGVSMQPM-IRKPSYPWVP  187 (270)
Q Consensus       163 ~f~rs~~lgl~~hs~-iHkp~~~~~~  187 (270)
                      .|.+.  ..|+.|.+ +|....+++.
T Consensus        78 ~f~~~--~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           78 TFKSS--FSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             ECSSH--HHHHHHHHHTSCCCCCCCC
T ss_pred             hhCCH--HHHHHHHHHHcCCCCCCCC
Confidence            99988  89999996 9988766553

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.14  E-value=2.8e-12  Score=95.72  Aligned_cols=83  Identities=13%  Similarity=0.154  Sum_probs=67.3

Q ss_pred             cCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcccc---CCCCCc---cCCCCCCCCCCCCccccccc
Q 047542           92 QPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALG---HHHYPY---YPYSSSVAHQNPNFYGSLFN  165 (270)
Q Consensus        92 HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~~---~~~~~~---~py~~~~~~~~p~~~G~~f~  165 (270)
                      +.++++|.|.+|++.|.....|..|+++|.++++|.|..|++.|....   .|...+   .+|.       |..|++.|.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-------C~~C~~~f~   75 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK-------CQICPYASR   75 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEE-------CSSSSCEES
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCcc-------CCCCCCccC
Confidence            456889999999999999999999999999999999999999985432   222211   2444       458999999


Q ss_pred             CCCCCCccccCCcCCCCC
Q 047542          166 RSSPLGVSMQPMIRKPSY  183 (270)
Q Consensus       166 rs~~lgl~~hs~iHkp~~  183 (270)
                      +.  ..|+.|.++|++..
T Consensus        76 ~~--~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           76 NS--SQLTVHLRSHTGDS   91 (96)
T ss_dssp             SH--HHHHHHHTTCCSCC
T ss_pred             CH--HHHHHHHHHhcCCC
Confidence            88  89999999998753

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=4.3e-11  Score=86.56  Aligned_cols=48  Identities=23%  Similarity=0.394  Sum_probs=42.9

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      ....+.++++|.|.+|++.|.....|..|+++|+++++|+|..|++.|
T Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   56 (77)
T 2cot_A            9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF   56 (77)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEE
T ss_pred             CcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCcc
Confidence            344677899999999999999999999999999999999999877665

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.6e-11  Score=77.49  Aligned_cols=44  Identities=20%  Similarity=0.305  Sum_probs=41.3

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.09  E-value=7.1e-11  Score=77.35  Aligned_cols=44  Identities=27%  Similarity=0.357  Sum_probs=41.3

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7e-11  Score=77.38  Aligned_cols=44  Identities=23%  Similarity=0.305  Sum_probs=41.3

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.07  E-value=6.9e-11  Score=77.41  Aligned_cols=44  Identities=23%  Similarity=0.312  Sum_probs=41.3

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999876

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.07  E-value=4.4e-12  Score=97.30  Aligned_cols=82  Identities=17%  Similarity=0.119  Sum_probs=66.6

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcccc---CCCCCc---cCCCCCCCCCCCCcccccc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALG---HHHYPY---YPYSSSVAHQNPNFYGSLF  164 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~~---~~~~~~---~py~~~~~~~~p~~~G~~f  164 (270)
                      .|+++++|.| .|++.|.....|..|++.|.++++|+|..|++.|....   .|...+   .+|.       |..|++.|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-------C~~C~~~f   75 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYE-------CNICAKRF   75 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEE-------CSSSCCEE
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCee-------CCCCcchh
Confidence            5889999999 99999999999999999999999999999999985432   222222   2333       45899999


Q ss_pred             cCCCCCCccccCCcCCCC
Q 047542          165 NRSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       165 ~rs~~lgl~~hs~iHkp~  182 (270)
                      .+.  ..|+.|.++|...
T Consensus        76 ~~~--~~l~~H~~~~~~~   91 (110)
T 2csh_A           76 MWR--DSFHRHVTSCTKS   91 (110)
T ss_dssp             SCH--HHHHHHHHHHHHH
T ss_pred             cCH--HHHHHHHHHcccc
Confidence            888  8899999887554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=7.3e-11  Score=77.12  Aligned_cols=44  Identities=20%  Similarity=0.293  Sum_probs=41.2

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999886

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.5e-11  Score=77.07  Aligned_cols=44  Identities=25%  Similarity=0.351  Sum_probs=41.3

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=7.8e-11  Score=76.99  Aligned_cols=44  Identities=25%  Similarity=0.338  Sum_probs=41.3

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.3e-11  Score=76.77  Aligned_cols=44  Identities=25%  Similarity=0.377  Sum_probs=41.1

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.1e-10  Score=76.22  Aligned_cols=43  Identities=23%  Similarity=0.468  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            4 GSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.7e-11  Score=77.03  Aligned_cols=43  Identities=23%  Similarity=0.418  Sum_probs=40.8

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4689999999999999999999999999999999999999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.3e-11  Score=76.85  Aligned_cols=44  Identities=25%  Similarity=0.428  Sum_probs=41.2

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            34679999999999999999999999999999999999999987

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.7e-11  Score=77.79  Aligned_cols=44  Identities=25%  Similarity=0.342  Sum_probs=41.2

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34679999999999999999999999999999999999999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.1e-11  Score=77.33  Aligned_cols=44  Identities=20%  Similarity=0.270  Sum_probs=41.3

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1e-10  Score=76.29  Aligned_cols=43  Identities=28%  Similarity=0.461  Sum_probs=40.9

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            4 GSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4689999999999999999999999999999999999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.6e-11  Score=77.09  Aligned_cols=44  Identities=20%  Similarity=0.329  Sum_probs=41.2

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=76.11  Aligned_cols=43  Identities=23%  Similarity=0.352  Sum_probs=40.8

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            4 GSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=9.5e-11  Score=76.43  Aligned_cols=43  Identities=26%  Similarity=0.339  Sum_probs=40.8

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            4 GSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             cCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4679999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.04  E-value=1e-10  Score=76.26  Aligned_cols=43  Identities=23%  Similarity=0.299  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            4 GSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.04  E-value=1.3e-10  Score=76.14  Aligned_cols=43  Identities=26%  Similarity=0.397  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            4 GSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.04  E-value=1.3e-10  Score=75.87  Aligned_cols=43  Identities=26%  Similarity=0.374  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            4 GSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            4579999999999999999999999999999999999999876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=76.25  Aligned_cols=43  Identities=26%  Similarity=0.443  Sum_probs=40.8

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            4 GSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            4679999999999999999999999999999999999999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=76.14  Aligned_cols=43  Identities=23%  Similarity=0.383  Sum_probs=40.8

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            4 GSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.04  E-value=1.1e-10  Score=76.05  Aligned_cols=43  Identities=23%  Similarity=0.350  Sum_probs=40.8

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            4 GSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4679999999999999999999999999999999999999887

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=2.7e-11  Score=86.05  Aligned_cols=46  Identities=20%  Similarity=0.217  Sum_probs=42.0

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|+|..|++.|.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~   48 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTK   48 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEES
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccC
Confidence            4778999999999999999999999999999999999998876653

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=75.89  Aligned_cols=43  Identities=26%  Similarity=0.286  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            4 GSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1e-10  Score=76.39  Aligned_cols=44  Identities=20%  Similarity=0.340  Sum_probs=41.2

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            34679999999999999999999999999999999999999876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.1e-10  Score=76.35  Aligned_cols=44  Identities=20%  Similarity=0.289  Sum_probs=41.3

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999876

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=1.1e-10  Score=79.43  Aligned_cols=46  Identities=26%  Similarity=0.381  Sum_probs=43.1

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhh-hccCCcccccccccchhc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQN-AHKQERALAKRRKEMDMG  136 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr-~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++++|.|.+|++.|.....|..|++ +|++++||+|..|++.|.
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            5788999999999999999999999987 999999999999998874

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.03  E-value=1.2e-11  Score=91.98  Aligned_cols=81  Identities=20%  Similarity=0.297  Sum_probs=65.0

Q ss_pred             CCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc---ccCCCCCc-----cCCCCCCCCCCCCcccccc
Q 047542           93 PKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA---LGHHHYPY-----YPYSSSVAHQNPNFYGSLF  164 (270)
Q Consensus        93 TgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~---~~~~~~~~-----~py~~~~~~~~p~~~G~~f  164 (270)
                      +++++|.|.+|++.|.....|..|+++|.++++|.|..|++.|..   |..|...+     .+|.       |..|++.|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~-------C~~C~~~f   75 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI-------CQSCGKGF   75 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBC-------CSSSCCCB
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceE-------CCCccchh
Confidence            468899999999999999999999999999999999999999854   22222211     2344       45899999


Q ss_pred             cCCCCCCccccCC-cCCCC
Q 047542          165 NRSSPLGVSMQPM-IRKPS  182 (270)
Q Consensus       165 ~rs~~lgl~~hs~-iHkp~  182 (270)
                      .+.  ..|+.|.+ +|...
T Consensus        76 ~~~--~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           76 SRP--DHLNGHIKQVHSGP   92 (95)
T ss_dssp             SSH--HHHHHHHHHTSCCC
T ss_pred             CCH--HHHHHHHHHhcCCC
Confidence            988  88999975 88653

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8.6e-11  Score=76.78  Aligned_cols=44  Identities=27%  Similarity=0.431  Sum_probs=41.3

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.4e-10  Score=75.81  Aligned_cols=44  Identities=20%  Similarity=0.267  Sum_probs=41.2

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhh-hccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQN-AHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr-~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|++ +|++++||+|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3568999999999999999999999999999 9999999999876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.1e-10  Score=76.35  Aligned_cols=43  Identities=21%  Similarity=0.356  Sum_probs=40.8

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            4 GSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             cCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4679999999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.6e-10  Score=75.39  Aligned_cols=43  Identities=26%  Similarity=0.364  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            4 GSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.6e-10  Score=75.52  Aligned_cols=43  Identities=23%  Similarity=0.428  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            4 GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.4e-10  Score=75.66  Aligned_cols=43  Identities=26%  Similarity=0.503  Sum_probs=40.8

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            4 GSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4679999999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.03  E-value=1.3e-10  Score=75.93  Aligned_cols=43  Identities=28%  Similarity=0.495  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            4 GSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             ccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.3e-10  Score=75.90  Aligned_cols=43  Identities=21%  Similarity=0.414  Sum_probs=40.6

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            4 GSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             ccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4679999999999999999999999999999999999999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=9.4e-11  Score=76.61  Aligned_cols=44  Identities=23%  Similarity=0.352  Sum_probs=41.2

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.2e-10  Score=76.06  Aligned_cols=43  Identities=23%  Similarity=0.437  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            4 GSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             cccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-10  Score=76.13  Aligned_cols=43  Identities=23%  Similarity=0.418  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            4 GSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.1e-10  Score=75.62  Aligned_cols=42  Identities=29%  Similarity=0.446  Sum_probs=40.2

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            579999999999999999999999999999999999999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=75.89  Aligned_cols=43  Identities=23%  Similarity=0.420  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            4 GSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=75.77  Aligned_cols=43  Identities=23%  Similarity=0.447  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            4 GSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=1.1e-10  Score=76.05  Aligned_cols=43  Identities=14%  Similarity=0.278  Sum_probs=41.0

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccccc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKE  132 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~  132 (270)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|..||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4689999999999999999999999999999999999999986

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.1e-10  Score=76.33  Aligned_cols=43  Identities=21%  Similarity=0.448  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            4 GSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4679999999999999999999999999999999999999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=75.85  Aligned_cols=43  Identities=23%  Similarity=0.371  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            4 GSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.3e-10  Score=75.70  Aligned_cols=43  Identities=26%  Similarity=0.341  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=75.88  Aligned_cols=43  Identities=21%  Similarity=0.442  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=75.14  Aligned_cols=43  Identities=21%  Similarity=0.276  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            4 GSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=76.23  Aligned_cols=43  Identities=21%  Similarity=0.329  Sum_probs=40.8

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            4 GSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4679999999999999999999999999999999999999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=75.92  Aligned_cols=43  Identities=28%  Similarity=0.427  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            4 GSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=1.4e-10  Score=82.94  Aligned_cols=49  Identities=24%  Similarity=0.286  Sum_probs=44.5

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|.+++||+|..|++.|.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~   53 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFS   53 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEES
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccC
Confidence            3468999999999999999999999999999999999999998877653

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.9e-10  Score=75.16  Aligned_cols=43  Identities=23%  Similarity=0.370  Sum_probs=40.3

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            4 GSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4679999999999999999999999999999999999999864

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.99  E-value=6.7e-11  Score=84.87  Aligned_cols=45  Identities=18%  Similarity=0.333  Sum_probs=41.2

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      .++++++|.|..|++.|.....|..|+++|+++++|+|..|++.|
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f   55 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQF   55 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEE
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchh
Confidence            567889999999999999999999999999999999999777654

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.8e-10  Score=75.27  Aligned_cols=43  Identities=26%  Similarity=0.438  Sum_probs=40.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            4 GSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             ccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4579999999999999999999999999999999999999876

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.4e-10  Score=74.05  Aligned_cols=42  Identities=26%  Similarity=0.481  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            467999999999999999999999999999999999999964

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.2e-10  Score=74.91  Aligned_cols=44  Identities=23%  Similarity=0.368  Sum_probs=40.7

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34689999999999999999999999999999999999999864

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=1.9e-10  Score=76.20  Aligned_cols=43  Identities=23%  Similarity=0.416  Sum_probs=40.6

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEM  133 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~  133 (270)
                      .|+++++|.|.+|++.|.....|..|+++|++++||+|..|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4778999999999999999999999999999999999999974

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=5.4e-11  Score=90.63  Aligned_cols=50  Identities=18%  Similarity=0.269  Sum_probs=44.3

Q ss_pred             cccccccCCCCcccCCCCCcccC-CchhhhhhhhhccC-Ccccccccccchh
Q 047542           86 ESIRKKQPKQKGFLCNFCNKIFS-TSQALGGHQNAHKQ-ERALAKRRKEMDM  135 (270)
Q Consensus        86 ~~~~~~HTgeKpf~C~~CgKsF~-sssaL~~Hqr~Htg-EKPfkCr~c~~~~  135 (270)
                      +...++|+++++|.|.+|++.|. ....|..|+++|++ +++|+|..|++.|
T Consensus        13 ~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F   64 (98)
T 2gqj_A           13 EQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQF   64 (98)
T ss_dssp             SHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCC
T ss_pred             HHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCcc
Confidence            44556899999999999999999 99999999999999 9999998776654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.97  E-value=1.6e-10  Score=87.74  Aligned_cols=47  Identities=13%  Similarity=0.198  Sum_probs=42.4

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .++...++|.|++|++.|.....|..|+++|+++|||+|..|++.|.
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~   67 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFY   67 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEES
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeC
Confidence            46778899999999999999999999999999999999998777653

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.8e-10  Score=72.50  Aligned_cols=40  Identities=20%  Similarity=0.331  Sum_probs=38.0

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAK  128 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkC  128 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CSSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3579999999999999999999999999999999999998

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.5e-10  Score=74.12  Aligned_cols=42  Identities=26%  Similarity=0.457  Sum_probs=39.6

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            468999999999999999999999999999999999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.1e-10  Score=74.70  Aligned_cols=42  Identities=29%  Similarity=0.415  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            457999999999999999999999999999999999999963

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.6e-10  Score=73.88  Aligned_cols=43  Identities=23%  Similarity=0.379  Sum_probs=39.9

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3468999999999999999999999999999999999999963

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.96  E-value=3.9e-10  Score=72.97  Aligned_cols=41  Identities=20%  Similarity=0.361  Sum_probs=38.8

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      ++|+++++|.|.+|++.|.....|..|+++|++++||+|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            57999999999999999999999999999999999999963

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=4.1e-10  Score=73.75  Aligned_cols=41  Identities=20%  Similarity=0.387  Sum_probs=39.0

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            45799999999999999999999999999999999999996

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.95  E-value=9.2e-12  Score=91.63  Aligned_cols=80  Identities=20%  Similarity=0.303  Sum_probs=62.7

Q ss_pred             CCCcccCC--CCCcccCCchhhhhhhhhccCCcccccccccchhcccc---CCCCCc---cCCCCCCCCCCCCccccccc
Q 047542           94 KQKGFLCN--FCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALG---HHHYPY---YPYSSSVAHQNPNFYGSLFN  165 (270)
Q Consensus        94 geKpf~C~--~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~~---~~~~~~---~py~~~~~~~~p~~~G~~f~  165 (270)
                      ++++|.|.  .|++.|.....|..|+++|.++++|.|..|++.|....   .|...+   .||.       |..||+.|.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-------C~~C~~~f~   73 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA-------CDICGRKFA   73 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE-------CTTTCCEES
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCcc-------CCCCCchhC
Confidence            46899998  59999999999999999999999999999999885432   222212   3444       358999999


Q ss_pred             CCCCCCccccCCcCCCC
Q 047542          166 RSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       166 rs~~lgl~~hs~iHkp~  182 (270)
                      +.  ..|+.|.++|++.
T Consensus        74 ~~--~~l~~H~~~H~~~   88 (90)
T 1a1h_A           74 RS--DERKRHTKIHLRQ   88 (90)
T ss_dssp             SH--HHHHHHHGGGGC-
T ss_pred             CH--HHHHHHHHHhccc
Confidence            88  8999999999753

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=3.5e-10  Score=73.96  Aligned_cols=43  Identities=23%  Similarity=0.366  Sum_probs=39.9

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3468999999999999999999999999999999999999964

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.95  E-value=1.8e-10  Score=93.17  Aligned_cols=80  Identities=16%  Similarity=0.121  Sum_probs=64.8

Q ss_pred             ccCCCCCcccCCchhhhhhhhhccCCccccccc--ccchhcc---ccCCCCCc---cCCCCCCCCCCCCc--ccccccCC
Q 047542           98 FLCNFCNKIFSTSQALGGHQNAHKQERALAKRR--KEMDMGA---LGHHHYPY---YPYSSSVAHQNPNF--YGSLFNRS  167 (270)
Q Consensus        98 f~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~--c~~~~~~---~~~~~~~~---~py~~~~~~~~p~~--~G~~f~rs  167 (270)
                      |.|.+|++.|.....|..|+++|+++++|.|..  |++.|..   |..|...+   .||.|       .+  ||+.|.+.
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C-------~~~~C~k~f~~~  135 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC-------EFEGCDRRFANS  135 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCC-------SSTTCCCCBSSH
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccC-------CCCCCCCccCCH
Confidence            899999999999999999999999999999998  9999854   33332222   34544       34  99999988


Q ss_pred             CCCCccccCCcCCCCCCCC
Q 047542          168 SPLGVSMQPMIRKPSYPWV  186 (270)
Q Consensus       168 ~~lgl~~hs~iHkp~~~~~  186 (270)
                        ..|+.|.++|+...++.
T Consensus       136 --~~L~~H~~~H~~~k~~~  152 (155)
T 2rpc_A          136 --SDRKKHMHVHTSDKSGP  152 (155)
T ss_dssp             --HHHHHSSTTTTSCCCSC
T ss_pred             --HHHHHHHHHhcCCCCCC
Confidence              89999999998876554

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.95  E-value=6.2e-12  Score=90.80  Aligned_cols=75  Identities=20%  Similarity=0.297  Sum_probs=58.6

Q ss_pred             cccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcccc---CCCCCc---cCCCCCCCCCCCCcccccccCCCCC
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALG---HHHYPY---YPYSSSVAHQNPNFYGSLFNRSSPL  170 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~~---~~~~~~---~py~~~~~~~~p~~~G~~f~rs~~l  170 (270)
                      ||.|.+|++.|.....|..|+++|.++++|+|..|++.|....   .|...+   .+|.       |..||+.|.+.  .
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-------C~~C~~~f~~~--~   71 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK-------CQVCGKAFSQS--S   71 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEE-------CTTTSCEESSH--H
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCc-------CCCcchhhCCh--H
Confidence            5889999999999999999999999999999999999885422   222211   3444       35899999887  8


Q ss_pred             CccccCCcCC
Q 047542          171 GVSMQPMIRK  180 (270)
Q Consensus       171 gl~~hs~iHk  180 (270)
                      .|+.|.++|+
T Consensus        72 ~l~~H~~~H~   81 (82)
T 2kmk_A           72 NLITHSRKHT   81 (82)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHhhC
Confidence            8889988885

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=6.1e-10  Score=72.65  Aligned_cols=42  Identities=29%  Similarity=0.471  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            4 GSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            457999999999999999999999999999999999999964

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.94  E-value=3e-11  Score=93.53  Aligned_cols=91  Identities=14%  Similarity=0.122  Sum_probs=62.6

Q ss_pred             CCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhccccCCCCCcc---CCCCCCCCCCCCcccccccCCCC
Q 047542           93 PKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGALGHHHYPYY---PYSSSVAHQNPNFYGSLFNRSSP  169 (270)
Q Consensus        93 TgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~~~~~~~~~---py~~~~~~~~p~~~G~~f~rs~~  169 (270)
                      +++++|.|.+|++.|.....|..|+++|.++++|.|..|++.|........|..   ...... ...|..||+.|.+.  
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~-~~~C~~C~~~f~~~--   79 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ-VFTCSVCQETFRRR--   79 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCC-CEECSSSCCEESSH--
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCC-CeECCCCCCccCCH--
Confidence            467788999999999999999999999998899999999888743221111110   001001 11345888888887  


Q ss_pred             CCccccCCcCCCCCCCC
Q 047542          170 LGVSMQPMIRKPSYPWV  186 (270)
Q Consensus       170 lgl~~hs~iHkp~~~~~  186 (270)
                      ..|+.|.++|....++.
T Consensus        80 ~~l~~H~~~h~~~~~~~   96 (124)
T 2dlq_A           80 MELRLHMVSHTGEMPYK   96 (124)
T ss_dssp             HHHHHHHHHHSSSCSEE
T ss_pred             HHHHHHHHHcCCCCCcc
Confidence            88888888887765544

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.2e-10  Score=73.58  Aligned_cols=42  Identities=21%  Similarity=0.377  Sum_probs=39.5

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            4 GSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             ccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            468999999999999999999999999999999999999963

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.2e-10  Score=73.80  Aligned_cols=43  Identities=23%  Similarity=0.358  Sum_probs=40.6

Q ss_pred             ccccCCCCcccCC--CCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           89 RKKQPKQKGFLCN--FCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        89 ~~~HTgeKpf~C~--~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      .++|+++++|.|.  .|++.|.....|..|+++|++++||+|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4689999999998  899999999999999999999999999876

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5.3e-10  Score=72.95  Aligned_cols=42  Identities=24%  Similarity=0.460  Sum_probs=39.5

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            457999999999999999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.7e-10  Score=73.18  Aligned_cols=42  Identities=21%  Similarity=0.403  Sum_probs=39.5

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            346899999999999999999999999999999999999996

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5.2e-10  Score=73.13  Aligned_cols=42  Identities=31%  Similarity=0.460  Sum_probs=39.5

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            467999999999999999999999999999999999999964

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=5.4e-10  Score=72.89  Aligned_cols=42  Identities=26%  Similarity=0.457  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            4 GSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            467999999999999999999999999999999999999973

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.93  E-value=5.2e-11  Score=92.74  Aligned_cols=84  Identities=19%  Similarity=0.242  Sum_probs=63.6

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc--ccchhccc---cCCCCCc---cCCCCCCCCCCC-Ccc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR--KEMDMGAL---GHHHYPY---YPYSSSVAHQNP-NFY  160 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~--c~~~~~~~---~~~~~~~---~py~~~~~~~~p-~~~  160 (270)
                      ++| +.++|.|.+|++.|.....|..|+++|.++++|.|..  |++.|...   ..|...+   .||.|      + ..|
T Consensus        28 ~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C------~~~~C  100 (124)
T 1ubd_C           28 HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC------PFDGC  100 (124)
T ss_dssp             GGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCC------CSTTC
T ss_pred             HHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceEC------CCCCC
Confidence            456 7889999999999999999999999999999999975  99988542   2222222   34554      1 259


Q ss_pred             cccccCCCCCCccccCCcCCCC
Q 047542          161 GSLFNRSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       161 G~~f~rs~~lgl~~hs~iHkp~  182 (270)
                      |+.|.+.  ..|+.|.++|+..
T Consensus       101 ~~~f~~~--~~L~~H~~~H~~~  120 (124)
T 1ubd_C          101 NKKFAQS--TNLKSHILTHAKA  120 (124)
T ss_dssp             CCCCSST--TTTHHHHHHHC--
T ss_pred             CCccCCH--HHHHHHHHHHccc
Confidence            9999888  8899999998764

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=5.3e-10  Score=71.59  Aligned_cols=40  Identities=20%  Similarity=0.358  Sum_probs=38.1

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAK  128 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkC  128 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            4579999999999999999999999999999999999998

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=6.8e-10  Score=72.55  Aligned_cols=42  Identities=26%  Similarity=0.457  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            4 GSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             ccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            457999999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.8e-10  Score=73.14  Aligned_cols=42  Identities=24%  Similarity=0.479  Sum_probs=39.5

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            467999999999999999999999999999999999999974

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.93  E-value=1.3e-11  Score=103.34  Aligned_cols=45  Identities=24%  Similarity=0.385  Sum_probs=24.8

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      +|.++++|.|.+|++.|.....|..|+++|+++++|+|..|++.|
T Consensus        99 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  143 (190)
T 2i13_A           99 THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSF  143 (190)
T ss_dssp             HHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             hcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCccc
Confidence            344555555555555555555555555555555555555555555

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=5.8e-10  Score=72.23  Aligned_cols=42  Identities=26%  Similarity=0.308  Sum_probs=39.1

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            346799999999999999999999999999999999999994

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=6e-10  Score=72.70  Aligned_cols=42  Identities=24%  Similarity=0.490  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            457999999999999999999999999999999999999974

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.92  E-value=1.2e-10  Score=89.40  Aligned_cols=49  Identities=12%  Similarity=0.170  Sum_probs=42.5

Q ss_pred             cccccccCCCCcccCCCCCccc-CCchhhhhhhhhccCCcccccccccchh
Q 047542           86 ESIRKKQPKQKGFLCNFCNKIF-STSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        86 ~~~~~~HTgeKpf~C~~CgKsF-~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      ....++|+++++|.|.+|++.| .....|..|+++| +++||.|..|++.|
T Consensus        23 ~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F   72 (96)
T 2ctd_A           23 EQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQL   72 (96)
T ss_dssp             HHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCC
T ss_pred             HHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCee
Confidence            3444567889999999999999 9999999999999 99999998776654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=98.92  E-value=7.5e-11  Score=95.91  Aligned_cols=80  Identities=19%  Similarity=0.186  Sum_probs=59.3

Q ss_pred             ccccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc---ccCCCCCc---cCCCCCCCCCCCCcc
Q 047542           87 SIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA---LGHHHYPY---YPYSSSVAHQNPNFY  160 (270)
Q Consensus        87 ~~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~---~~~~~~~~---~py~~~~~~~~p~~~  160 (270)
                      ...++|+++++|.|.+|++.|.....|..|+++|++++||.|..|++.|..   |..|...+   .|+.+... ..|..|
T Consensus        40 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~-~~C~~C  118 (133)
T 2lt7_A           40 RHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKL-YRLHPC  118 (133)
T ss_dssp             HHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCC-EEECCC
T ss_pred             HHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCC-eecCCC
Confidence            334579999999999999999999999999999999999999999999954   33322211   24433222 235688


Q ss_pred             cccccCC
Q 047542          161 GSLFNRS  167 (270)
Q Consensus       161 G~~f~rs  167 (270)
                      ++.|.+.
T Consensus       119 ~k~~~~~  125 (133)
T 2lt7_A          119 RSLQIRQ  125 (133)
T ss_dssp             CSSCCCC
T ss_pred             Cchhhhc
Confidence            8866543

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.7e-10  Score=72.16  Aligned_cols=40  Identities=18%  Similarity=0.273  Sum_probs=38.1

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAK  128 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkC  128 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            4579999999999999999999999999999999999998

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=6.4e-10  Score=70.88  Aligned_cols=40  Identities=23%  Similarity=0.339  Sum_probs=38.0

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAK  128 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkC  128 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3579999999999999999999999999999999999998

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=6.1e-10  Score=70.99  Aligned_cols=40  Identities=23%  Similarity=0.399  Sum_probs=38.1

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      ++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5799999999999999999999999999999999999984

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=7.5e-10  Score=72.07  Aligned_cols=42  Identities=24%  Similarity=0.347  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            457999999999999999999999999999999999999963

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=6.2e-10  Score=72.48  Aligned_cols=42  Identities=24%  Similarity=0.456  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            457999999999999999999999999999999999999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.92  E-value=5.6e-10  Score=71.16  Aligned_cols=40  Identities=23%  Similarity=0.391  Sum_probs=38.1

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAK  128 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkC  128 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3579999999999999999999999999999999999998

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.91  E-value=5.7e-10  Score=71.28  Aligned_cols=40  Identities=23%  Similarity=0.409  Sum_probs=38.1

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      ++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            5799999999999999999999999999999999999994

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.1e-10  Score=72.46  Aligned_cols=42  Identities=29%  Similarity=0.459  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            4 GSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            457999999999999999999999999999999999999964

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.91  E-value=2.9e-10  Score=82.82  Aligned_cols=53  Identities=19%  Similarity=0.298  Sum_probs=45.3

Q ss_pred             ccccccccCCCCcccCCCCCcccCCchhhhhhhhhccCC----cccccccccchhcc
Q 047542           85 HESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQE----RALAKRRKEMDMGA  137 (270)
Q Consensus        85 ~~~~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgE----KPfkCr~c~~~~~~  137 (270)
                      .....++|+++++|.|.+|++.|.....|..|++.|..+    ++|+|..|++.|..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~   59 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTR   59 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCC
Confidence            345567899999999999999999999999999877654    79999998887743

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.91  E-value=5.7e-10  Score=72.91  Aligned_cols=42  Identities=31%  Similarity=0.452  Sum_probs=39.5

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            4 GSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            457999999999999999999999999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.4e-10  Score=71.29  Aligned_cols=41  Identities=24%  Similarity=0.372  Sum_probs=38.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            4 GSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            45799999999999999999999999999999999999994

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.3e-10  Score=72.42  Aligned_cols=42  Identities=29%  Similarity=0.423  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            457999999999999999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.5e-10  Score=72.20  Aligned_cols=42  Identities=26%  Similarity=0.421  Sum_probs=39.3

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            4 GSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             ccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            457999999999999999999999999999999999999963

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.4e-10  Score=72.38  Aligned_cols=42  Identities=26%  Similarity=0.444  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            457999999999999999999999999999999999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.5e-10  Score=72.07  Aligned_cols=42  Identities=21%  Similarity=0.387  Sum_probs=39.2

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            346899999999999999999999999999999999999994

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=8.1e-10  Score=71.40  Aligned_cols=42  Identities=19%  Similarity=0.336  Sum_probs=39.2

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            346799999999999999999999999999999999999994

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.6e-10  Score=72.68  Aligned_cols=42  Identities=24%  Similarity=0.400  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            4 GSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            467999999999999999999999999999999999999964

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=7.2e-10  Score=72.43  Aligned_cols=42  Identities=26%  Similarity=0.425  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            4 GSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             ccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            457999999999999999999999999999999999999963

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=8.8e-10  Score=72.00  Aligned_cols=41  Identities=32%  Similarity=0.494  Sum_probs=39.0

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccC-Ccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQ-ERALAKR  129 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~Htg-EKPfkCr  129 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++ ++||+|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4679999999999999999999999999999999 9999996

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1e-09  Score=70.91  Aligned_cols=41  Identities=17%  Similarity=0.435  Sum_probs=38.6

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      .++|++++||.|.+|++.|.....|..|+++|++++||+|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             SCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            45799999999999999999999999999999999999994

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=8.8e-10  Score=71.73  Aligned_cols=42  Identities=24%  Similarity=0.419  Sum_probs=39.3

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            457999999999999999999999999999999999999963

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.3e-10  Score=71.59  Aligned_cols=41  Identities=24%  Similarity=0.417  Sum_probs=38.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            4 GSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            46799999999999999999999999999999999999994

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=9.6e-10  Score=70.75  Aligned_cols=41  Identities=29%  Similarity=0.431  Sum_probs=38.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            4 GSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             SSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             ccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            45799999999999999999999999999999999999994

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.6e-10  Score=72.32  Aligned_cols=42  Identities=29%  Similarity=0.443  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            4 GSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             cccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            457999999999999999999999999999999999999963

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.87  E-value=9.2e-11  Score=87.82  Aligned_cols=79  Identities=18%  Similarity=0.346  Sum_probs=63.2

Q ss_pred             CCCCcccCCC--CCcccCCchhhhhhhhhccCCcccccc--cccchhccc---cCCCCCc---cCCCCCCCCCCCCcccc
Q 047542           93 PKQKGFLCNF--CNKIFSTSQALGGHQNAHKQERALAKR--RKEMDMGAL---GHHHYPY---YPYSSSVAHQNPNFYGS  162 (270)
Q Consensus        93 TgeKpf~C~~--CgKsF~sssaL~~Hqr~HtgEKPfkCr--~c~~~~~~~---~~~~~~~---~py~~~~~~~~p~~~G~  162 (270)
                      ...++|.|.+  |++.|.....|..|+++|.++++|.|.  .|++.|...   ..|...+   .||.|       ..||+
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C-------~~C~~   83 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC-------GVCNR   83 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBC-------SSSCC
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeEC-------CCCcC
Confidence            3567899997  999999999999999999999999996  699988543   2222222   34543       58999


Q ss_pred             cccCCCCCCccccCCcCC
Q 047542          163 LFNRSSPLGVSMQPMIRK  180 (270)
Q Consensus       163 ~f~rs~~lgl~~hs~iHk  180 (270)
                      .|.+.  ..|+.|.++|+
T Consensus        84 ~f~~~--~~l~~H~~~H~   99 (100)
T 2ebt_A           84 SFSRS--DHLALHMKRHQ   99 (100)
T ss_dssp             BCSSH--HHHHHHHHHHC
T ss_pred             ccCCH--HHHHHHHHHhC
Confidence            99988  88999999885

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.4e-10  Score=72.39  Aligned_cols=41  Identities=27%  Similarity=0.495  Sum_probs=39.0

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45799999999999999999999999999999999999996

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.87  E-value=4.5e-10  Score=78.46  Aligned_cols=49  Identities=8%  Similarity=0.247  Sum_probs=43.6

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhh-c-cCCcccccccccchhcc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNA-H-KQERALAKRRKEMDMGA  137 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~-H-tgEKPfkCr~c~~~~~~  137 (270)
                      .++|+++++|.|..|++.|.....|..|++. | +++++|+|..|++.|..
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~   52 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTR   52 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCC
Confidence            3578999999999999999999999999998 8 69999999998887743

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.86  E-value=2.2e-11  Score=93.80  Aligned_cols=45  Identities=24%  Similarity=0.455  Sum_probs=25.2

Q ss_pred             ccCCCCcccCC--CCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           91 KQPKQKGFLCN--FCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        91 ~HTgeKpf~C~--~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      +|+++++|.|.  .|++.|.....|..|+++|.++++|+|..|++.|
T Consensus        30 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   76 (119)
T 2jp9_A           30 KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKF   76 (119)
T ss_dssp             HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             hhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchh
Confidence            44555555555  3555555555555555555555555555555555

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.86  E-value=1.1e-09  Score=79.06  Aligned_cols=51  Identities=16%  Similarity=0.282  Sum_probs=44.2

Q ss_pred             cccccccCCCCcccCCCCCcccCCchhhhhhhh-hccCC-cccccccccchhc
Q 047542           86 ESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQN-AHKQE-RALAKRRKEMDMG  136 (270)
Q Consensus        86 ~~~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr-~HtgE-KPfkCr~c~~~~~  136 (270)
                      ....++|+++++|.|.+|++.|.....|..|++ .|.++ ++|+|..|++.|.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~   56 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIA   56 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEES
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccC
Confidence            345678999999999999999999999999997 78875 8999998877653

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.1e-09  Score=71.18  Aligned_cols=42  Identities=26%  Similarity=0.447  Sum_probs=39.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            4 GSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             ccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            457999999999999999999999999999999999999963

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.5e-09  Score=70.35  Aligned_cols=41  Identities=22%  Similarity=0.282  Sum_probs=38.5

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAK  128 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkC  128 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            34689999999999999999999999999999999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=9.5e-10  Score=71.72  Aligned_cols=41  Identities=24%  Similarity=0.313  Sum_probs=38.9

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45799999999999999999999999999999999999996

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.84  E-value=8.5e-10  Score=74.68  Aligned_cols=43  Identities=21%  Similarity=0.339  Sum_probs=37.1

Q ss_pred             CCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhc
Q 047542           94 KQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus        94 geKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      ++++|.|.+|++.|.....|..|+++|++++||.|..|++.|.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   43 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAA   43 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEES
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhC
Confidence            4689999999999999999999999999999999999888764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=6.8e-10  Score=80.16  Aligned_cols=46  Identities=15%  Similarity=0.239  Sum_probs=42.2

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccC---Ccccccccccchhc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQ---ERALAKRRKEMDMG  136 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~Htg---EKPfkCr~c~~~~~  136 (270)
                      .|+++++|.|.+|++.|.....|..|+++|.+   +++|.|..|++.|.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~   49 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFE   49 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEES
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhC
Confidence            47899999999999999999999999999996   89999998887764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.82  E-value=7e-10  Score=78.97  Aligned_cols=50  Identities=22%  Similarity=0.393  Sum_probs=44.4

Q ss_pred             ccccccCCCCcccCC--CCCcccCCchhhhhhhhhccCCcccccccccchhc
Q 047542           87 SIRKKQPKQKGFLCN--FCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus        87 ~~~~~HTgeKpf~C~--~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      ....+|+++++|.|.  .|++.|.....|..|+++|.++++|+|..|++.|.
T Consensus         9 ~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   60 (73)
T 1f2i_G            9 LLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS   60 (73)
T ss_dssp             TTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             hhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhC
Confidence            345578899999997  59999999999999999999999999998887764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.81  E-value=1.6e-09  Score=68.27  Aligned_cols=38  Identities=37%  Similarity=0.794  Sum_probs=35.5

Q ss_pred             cCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc
Q 047542           92 QPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        92 HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      |+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            67899999999999999999999999999999999985

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.81  E-value=2.1e-10  Score=92.41  Aligned_cols=88  Identities=13%  Similarity=0.168  Sum_probs=46.4

Q ss_pred             cccCCCCcccCCC--CCcccCCchhhhhhhhhccCCccccccc--ccchhccccCCCCCc-cCCCCCCCCCCCCc--ccc
Q 047542           90 KKQPKQKGFLCNF--CNKIFSTSQALGGHQNAHKQERALAKRR--KEMDMGALGHHHYPY-YPYSSSVAHQNPNF--YGS  162 (270)
Q Consensus        90 ~~HTgeKpf~C~~--CgKsF~sssaL~~Hqr~HtgEKPfkCr~--c~~~~~~~~~~~~~~-~py~~~~~~~~p~~--~G~  162 (270)
                      ++|+++++|.|.+  |++.|.....|..|+++|+++++|+|..  |++.|........|. .-+....++ .|..  ||+
T Consensus        60 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~-~C~~~~C~~  138 (155)
T 2gli_A           60 RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPY-VCKLPGCTK  138 (155)
T ss_dssp             HHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCE-ECCSTTTCC
T ss_pred             HhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCe-eCCCCCCcc
Confidence            3456666666664  6666666666666666666666666665  666664333222221 111111111 1224  666


Q ss_pred             cccCCCCCCccccCCcCC
Q 047542          163 LFNRSSPLGVSMQPMIRK  180 (270)
Q Consensus       163 ~f~rs~~lgl~~hs~iHk  180 (270)
                      .|.+.  ..|+.|.++|.
T Consensus       139 ~f~~~--~~L~~H~~~hh  154 (155)
T 2gli_A          139 RYTDP--SSLRKHVKTVH  154 (155)
T ss_dssp             EESSH--HHHHHHHHHSC
T ss_pred             ccCCH--HHHHHHHHhhc
Confidence            66665  56666665553

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.80  E-value=1.4e-09  Score=78.24  Aligned_cols=45  Identities=24%  Similarity=0.530  Sum_probs=34.9

Q ss_pred             CCCCcccCCC--CCcccCCchhhhhhhh-hccCCccccccc--ccchhcc
Q 047542           93 PKQKGFLCNF--CNKIFSTSQALGGHQN-AHKQERALAKRR--KEMDMGA  137 (270)
Q Consensus        93 TgeKpf~C~~--CgKsF~sssaL~~Hqr-~HtgEKPfkCr~--c~~~~~~  137 (270)
                      +++++|.|..  |++.|.....|..|++ .|+++++|+|..  |++.|..
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~   52 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNF   52 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCC
Confidence            4567788776  8888888888888887 688888888887  8887743

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.79  E-value=7.1e-11  Score=90.94  Aligned_cols=84  Identities=19%  Similarity=0.320  Sum_probs=67.5

Q ss_pred             CCCCcccCCC--CCcccCCchhhhhhhhhccCCcccccc--cccchhccc---cCCCCCc---cCCCCCCCCCCCCcccc
Q 047542           93 PKQKGFLCNF--CNKIFSTSQALGGHQNAHKQERALAKR--RKEMDMGAL---GHHHYPY---YPYSSSVAHQNPNFYGS  162 (270)
Q Consensus        93 TgeKpf~C~~--CgKsF~sssaL~~Hqr~HtgEKPfkCr--~c~~~~~~~---~~~~~~~---~py~~~~~~~~p~~~G~  162 (270)
                      +++++|.|.+  |++.|.....|..|+++|.++++|.|.  .|++.|...   ..|...+   .+|.       |..||+
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~-------C~~C~~   74 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQ-------CKTCQR   74 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEE-------CTTTCC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCcc-------CCccCc
Confidence            5788999997  999999999999999999999999999  799998543   2222222   3444       358999


Q ss_pred             cccCCCCCCccccCCcCCCCCCC
Q 047542          163 LFNRSSPLGVSMQPMIRKPSYPW  185 (270)
Q Consensus       163 ~f~rs~~lgl~~hs~iHkp~~~~  185 (270)
                      .|.+.  ..|+.|.++|....++
T Consensus        75 ~f~~~--~~l~~H~~~h~~~~~~   95 (119)
T 2jp9_A           75 KFSRS--DHLKTHTRTHTGEKPF   95 (119)
T ss_dssp             EESCH--HHHHHHHHHHHTCCCE
T ss_pred             hhCCH--HHHHHHHHHhcCCCCe
Confidence            99988  8999999999776443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.78  E-value=2.1e-09  Score=76.39  Aligned_cols=47  Identities=19%  Similarity=0.411  Sum_probs=40.8

Q ss_pred             cccCCCCcccCCC--CCcccCCchhhhhhhhhccCCccccccc--ccchhc
Q 047542           90 KKQPKQKGFLCNF--CNKIFSTSQALGGHQNAHKQERALAKRR--KEMDMG  136 (270)
Q Consensus        90 ~~HTgeKpf~C~~--CgKsF~sssaL~~Hqr~HtgEKPfkCr~--c~~~~~  136 (270)
                      ..+...++|.|.+  |++.|.....|..|+++|++++||+|..  |++.|.
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~   60 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFA   60 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEES
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccC
Confidence            3456788999999  9999999999999999999999999964  776653

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.76  E-value=9.9e-10  Score=91.84  Aligned_cols=83  Identities=16%  Similarity=0.245  Sum_probs=51.8

Q ss_pred             cccCCCCcccCC--CCCcccCCchhhhhhh-hhc-cCCccccc--ccccchhcc---ccCCCCCc---cCCCCCCCCCCC
Q 047542           90 KKQPKQKGFLCN--FCNKIFSTSQALGGHQ-NAH-KQERALAK--RRKEMDMGA---LGHHHYPY---YPYSSSVAHQNP  157 (270)
Q Consensus        90 ~~HTgeKpf~C~--~CgKsF~sssaL~~Hq-r~H-tgEKPfkC--r~c~~~~~~---~~~~~~~~---~py~~~~~~~~p  157 (270)
                      ++|+++++|.|.  .|++.|.....|..|+ +.| .++++|.|  ..|++.|..   |..|...+   .||.|       
T Consensus        65 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C-------  137 (190)
T 1tf6_A           65 LTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC-------  137 (190)
T ss_dssp             TTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBC-------
T ss_pred             HHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccC-------
Confidence            456677777777  6777777777777776 566 45677777  667777643   22222222   23433       


Q ss_pred             Cc--ccccccCCCCCCccccCCcCCC
Q 047542          158 NF--YGSLFNRSSPLGVSMQPMIRKP  181 (270)
Q Consensus       158 ~~--~G~~f~rs~~lgl~~hs~iHkp  181 (270)
                      ..  ||+.|.+.  ..|+.|.++|.+
T Consensus       138 ~~~~C~k~F~~~--~~L~~H~~~H~~  161 (190)
T 1tf6_A          138 PHEGCDKRFSLP--SRLKRHEKVHAG  161 (190)
T ss_dssp             CSSSCCCBCSSH--HHHHHHHTSSCS
T ss_pred             CCCCCCchhcCH--HHHHHHHHHhCC
Confidence            24  77777666  667777777765

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.74  E-value=1.5e-09  Score=73.41  Aligned_cols=40  Identities=15%  Similarity=0.294  Sum_probs=37.1

Q ss_pred             cccCCCCCcccCCchhhhhhhhhccCCcccccccccchhc
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      ||.|..|++.|.....|..|+++|+++++|.|..|++.|.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   40 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFK   40 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEES
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhc
Confidence            6899999999999999999999999999999998887664

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.74  E-value=2.4e-10  Score=88.36  Aligned_cols=84  Identities=17%  Similarity=0.284  Sum_probs=66.7

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhh---ccCCcccccccccchhcc---ccCCCCCc---cCCCCCCCCCCCCc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNA---HKQERALAKRRKEMDMGA---LGHHHYPY---YPYSSSVAHQNPNF  159 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~---HtgEKPfkCr~c~~~~~~---~~~~~~~~---~py~~~~~~~~p~~  159 (270)
                      .++|.++++|.|.+|++.|.....|..|++.   |.++++|.|..|++.|..   |..|...+   .||.|       ..
T Consensus        27 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C-------~~   99 (124)
T 2dlq_A           27 NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKC-------SS   99 (124)
T ss_dssp             HHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEEC-------SS
T ss_pred             HHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccC-------CC
Confidence            3578899999999999999999999999985   688999999999999854   32222222   34543       58


Q ss_pred             ccccccCCCCCCccccCC-cCCC
Q 047542          160 YGSLFNRSSPLGVSMQPM-IRKP  181 (270)
Q Consensus       160 ~G~~f~rs~~lgl~~hs~-iHkp  181 (270)
                      ||+.|.+.  ..|+.|.+ +|..
T Consensus       100 C~~~f~~~--~~l~~H~~~~H~~  120 (124)
T 2dlq_A          100 CSQQFMQK--KDLQSHMIKLHSG  120 (124)
T ss_dssp             SCCEESSH--HHHHHHHHHTSSC
T ss_pred             ccchhCCH--HHHHHHHHHHCCC
Confidence            99999988  88999986 6754

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=3.3e-09  Score=80.58  Aligned_cols=47  Identities=19%  Similarity=0.404  Sum_probs=42.8

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|++++||+|.+|....
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~~   63 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRK   63 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhHH
Confidence            35789999999999999999999999999999999999999876543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.74  E-value=1.8e-09  Score=84.61  Aligned_cols=46  Identities=11%  Similarity=0.193  Sum_probs=40.5

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhh-hc---cCCcccccccccchhc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQN-AH---KQERALAKRRKEMDMG  136 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr-~H---tgEKPfkCr~c~~~~~  136 (270)
                      .-++++||.|.+|++.|.....|..|++ +|   ++++||+|..|++.|.
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~   61 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTK   61 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEES
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccC
Confidence            3478999999999999999999999997 59   6799999998887764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.74  E-value=2e-10  Score=84.17  Aligned_cols=76  Identities=17%  Similarity=0.295  Sum_probs=58.9

Q ss_pred             CCcccCCC--CCcccCCchhhhhhhhhccCCcccccc--cccchhcccc---CCCCCc---cCCCCCCCCCCCCcccccc
Q 047542           95 QKGFLCNF--CNKIFSTSQALGGHQNAHKQERALAKR--RKEMDMGALG---HHHYPY---YPYSSSVAHQNPNFYGSLF  164 (270)
Q Consensus        95 eKpf~C~~--CgKsF~sssaL~~Hqr~HtgEKPfkCr--~c~~~~~~~~---~~~~~~---~py~~~~~~~~p~~~G~~f  164 (270)
                      .++|.|.+  |++.|.....|..|+++|.++++|.|.  .|++.|....   .|...+   .||.|       ..||+.|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C-------~~C~~~f   75 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC-------QKCDRAF   75 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEEC-------SSSSCEE
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccC-------CCCCccc
Confidence            46789999  999999999999999999999999997  6999885432   222212   34443       4899999


Q ss_pred             cCCCCCCccccCCcC
Q 047542          165 NRSSPLGVSMQPMIR  179 (270)
Q Consensus       165 ~rs~~lgl~~hs~iH  179 (270)
                      .+.  ..|+.|.++|
T Consensus        76 ~~~--~~l~~H~~~H   88 (89)
T 2wbs_A           76 SRS--DHLALHMKRH   88 (89)
T ss_dssp             SSH--HHHHHHGGGG
T ss_pred             CCH--HHHHHHHHhh
Confidence            887  8888998888

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.73  E-value=6.5e-10  Score=92.99  Aligned_cols=91  Identities=18%  Similarity=0.270  Sum_probs=70.7

Q ss_pred             ccccCCCCcccC--CCCCcccCCchhhhhhhhhccCCcccccc--cccchhcccc---CCC-CCc----cCCCCCCCCCC
Q 047542           89 RKKQPKQKGFLC--NFCNKIFSTSQALGGHQNAHKQERALAKR--RKEMDMGALG---HHH-YPY----YPYSSSVAHQN  156 (270)
Q Consensus        89 ~~~HTgeKpf~C--~~CgKsF~sssaL~~Hqr~HtgEKPfkCr--~c~~~~~~~~---~~~-~~~----~py~~~~~~~~  156 (270)
                      .++|+++++|.|  ..|++.|.....|..|+++|.++++|.|.  .|++.|....   .|. ..+    .+|.|.     
T Consensus        34 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~-----  108 (190)
T 1tf6_A           34 LCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCH-----  108 (190)
T ss_dssp             HHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEEC-----
T ss_pred             HHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCC-----
Confidence            356889999999  88999999999999999999999999999  8999985432   222 111    133220     


Q ss_pred             CCcccccccCCCCCCccccCCcCCCCCCCC
Q 047542          157 PNFYGSLFNRSSPLGVSMQPMIRKPSYPWV  186 (270)
Q Consensus       157 p~~~G~~f~rs~~lgl~~hs~iHkp~~~~~  186 (270)
                      ...||+.|.+.  ..|+.|.++|+...++.
T Consensus       109 ~~~C~k~f~~~--~~L~~H~~~H~~~~~~~  136 (190)
T 1tf6_A          109 FENCGKAFKKH--NQLKVHQFSHTQQLPYE  136 (190)
T ss_dssp             SSSSCEECSSH--HHHHHHHGGGSSSCSSB
T ss_pred             CCCCccccCCH--HHHHHHHHHhCCCCCcc
Confidence            04799999988  89999999998876554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.73  E-value=2.7e-09  Score=74.88  Aligned_cols=48  Identities=10%  Similarity=0.149  Sum_probs=42.4

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGAL  138 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~  138 (270)
                      ..++|++++||.|.+|++.|.....|.   ++|++++||+|..|++.|...
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~   52 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEED   52 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEEC
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccC
Confidence            446899999999999999999888776   889999999999999988543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.71  E-value=4.6e-09  Score=71.86  Aligned_cols=41  Identities=20%  Similarity=0.482  Sum_probs=37.8

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      +||.|.+|++.|.....|..|+++|+++++|.|..|++.|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   41 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFT   41 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEES
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccC
Confidence            58999999999999999999999999999999998877653

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.71  E-value=1.3e-09  Score=78.42  Aligned_cols=46  Identities=26%  Similarity=0.382  Sum_probs=43.9

Q ss_pred             ccCCCCcccCCC--CCcccCCchhhhhhhhhccCCcccccccccchhc
Q 047542           91 KQPKQKGFLCNF--CNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus        91 ~HTgeKpf~C~~--CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      +|+++++|.|.+  |++.|.....|..|+++|++++||+|..|++.|+
T Consensus        32 ~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           32 QHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             GGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             HhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            699999999999  9999999999999999999999999999998874

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.71  E-value=1e-10  Score=97.95  Aligned_cols=44  Identities=27%  Similarity=0.425  Sum_probs=21.5

Q ss_pred             cCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           92 QPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        92 HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      |.++++|.|..|++.|.....|..|+++|.++++|.|..|++.|
T Consensus        72 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  115 (190)
T 2i13_A           72 HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSF  115 (190)
T ss_dssp             HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEE
T ss_pred             cCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCcc
Confidence            44444444545555454444455554444444455555554444

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.70  E-value=7.8e-10  Score=86.00  Aligned_cols=86  Identities=19%  Similarity=0.291  Sum_probs=64.6

Q ss_pred             CCCcccCC--CCCcccCCchhhhhhhhhccCCcccccccccchhcc---ccCCCCCc---cCCCCCCCCCCCCccccccc
Q 047542           94 KQKGFLCN--FCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA---LGHHHYPY---YPYSSSVAHQNPNFYGSLFN  165 (270)
Q Consensus        94 geKpf~C~--~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~---~~~~~~~~---~py~~~~~~~~p~~~G~~f~  165 (270)
                      .+++|.|.  .|++.|.....|..|+++| ++++|.|..|++.|..   |..|...+   .+|.|    . ...||+.|.
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C----~-~~~C~~~f~   75 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC----T-FEGCGKRFS   75 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEEC----C-STTCCCEES
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeC----C-CCCCcCccC
Confidence            35789999  8999999999999999999 8999999999999854   33332222   24443    0 014999999


Q ss_pred             CCCCCCccccCCcCCCCCCCCC
Q 047542          166 RSSPLGVSMQPMIRKPSYPWVP  187 (270)
Q Consensus       166 rs~~lgl~~hs~iHkp~~~~~~  187 (270)
                      +.  ..|+.|.++|.+..++..
T Consensus        76 ~~--~~l~~H~~~h~~~~~~~C   95 (124)
T 1ubd_C           76 LD--FNLRTHVRIHTGDRPYVC   95 (124)
T ss_dssp             CH--HHHHHHHHHHHCCCCCCC
T ss_pred             CH--HHHHHHHHHhCCCCceEC
Confidence            88  899999999987765543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.68  E-value=1.7e-10  Score=83.50  Aligned_cols=78  Identities=14%  Similarity=0.109  Sum_probs=58.5

Q ss_pred             cccC--CCCCcccCCchhhhhhhhhccCCccccccc--ccchhcccc---CCCCCccCCCCCCCCCCCCcccccccCCCC
Q 047542           97 GFLC--NFCNKIFSTSQALGGHQNAHKQERALAKRR--KEMDMGALG---HHHYPYYPYSSSVAHQNPNFYGSLFNRSSP  169 (270)
Q Consensus        97 pf~C--~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~--c~~~~~~~~---~~~~~~~py~~~~~~~~p~~~G~~f~rs~~  169 (270)
                      ||.|  ..|++.|.....|..|+++|.++++|+|..  |++.|....   .|...+..|.|    ..|..||+.|.+.  
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~C----~~~~~C~~~f~~~--   74 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC----KKDDSCSFVGKTW--   74 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHSEEC----CSCSSCCCEESSH--
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCC----CCCCCCCCccCCH--
Confidence            6899  889999999999999999999999999988  999985432   22222222333    2111299999887  


Q ss_pred             CCccccCCcCC
Q 047542          170 LGVSMQPMIRK  180 (270)
Q Consensus       170 lgl~~hs~iHk  180 (270)
                      ..|+.|.++|+
T Consensus        75 ~~l~~H~~~hh   85 (85)
T 2j7j_A           75 TLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhcC
Confidence            88888887763

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=8.3e-09  Score=72.58  Aligned_cols=43  Identities=16%  Similarity=0.258  Sum_probs=38.9

Q ss_pred             cCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccc-cccchhc
Q 047542           92 QPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKR-RKEMDMG  136 (270)
Q Consensus        92 HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr-~c~~~~~  136 (270)
                      ..+++||.|.+|++.|. ...|..|+++ ++++||+|. .|++.|.
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~   48 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTV   48 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEE
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccc
Confidence            46789999999999999 9999999999 999999999 8887653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=1.4e-08  Score=62.83  Aligned_cols=36  Identities=19%  Similarity=0.474  Sum_probs=33.9

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCCcc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERA  125 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKP  125 (270)
                      ++|+++++|.|.+|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999999886

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.60  E-value=1.9e-08  Score=61.15  Aligned_cols=35  Identities=23%  Similarity=0.447  Sum_probs=32.9

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCcc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERA  125 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKP  125 (270)
                      +|+++++|.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.59  E-value=2.2e-08  Score=61.12  Aligned_cols=35  Identities=20%  Similarity=0.478  Sum_probs=32.9

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCcc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERA  125 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKP  125 (270)
                      +|+++++|.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47899999999999999999999999999999876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.59  E-value=3.6e-09  Score=83.25  Aligned_cols=43  Identities=21%  Similarity=0.285  Sum_probs=32.1

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      .|++++||.|.+|++.|.....|..|+++|  ++||+|..|++.|
T Consensus        68 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f  110 (129)
T 2wbt_A           68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEF  110 (129)
T ss_dssp             HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBC
T ss_pred             HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCccc
Confidence            467777888888888888888888888777  7777777665554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.58  E-value=5e-09  Score=84.23  Aligned_cols=87  Identities=17%  Similarity=0.238  Sum_probs=66.9

Q ss_pred             ccCCCCcccCCCC-----CcccCCchhhhhhhhhccCCccccccc--ccchhcccc---CCCCCc---cCCCCCCCCCCC
Q 047542           91 KQPKQKGFLCNFC-----NKIFSTSQALGGHQNAHKQERALAKRR--KEMDMGALG---HHHYPY---YPYSSSVAHQNP  157 (270)
Q Consensus        91 ~HTgeKpf~C~~C-----gKsF~sssaL~~Hqr~HtgEKPfkCr~--c~~~~~~~~---~~~~~~---~py~~~~~~~~p  157 (270)
                      +|+++++|.|.+|     ++.|.....|..|+++|.++++|.|..  |++.|....   .|...+   .||.|       
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C-------  100 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMC-------  100 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEEC-------
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeC-------
Confidence            5788899998753     499999999999999999999999984  999985432   222222   34443       


Q ss_pred             Cc--ccccccCCCCCCccccC-CcCCCCCCCC
Q 047542          158 NF--YGSLFNRSSPLGVSMQP-MIRKPSYPWV  186 (270)
Q Consensus       158 ~~--~G~~f~rs~~lgl~~hs-~iHkp~~~~~  186 (270)
                      ..  ||+.|.+.  ..|+.|. ++|....++.
T Consensus       101 ~~~~C~~~f~~~--~~L~~H~~~~H~~~~~~~  130 (155)
T 2gli_A          101 EHEGCSKAFSNA--SDRAKHQNRTHSNEKPYV  130 (155)
T ss_dssp             CSTTCCCEESSS--STTHHHHHHTTCSCCCEE
T ss_pred             CCCCCCCccCCH--HHHHHHHHHhcCCCCCee
Confidence            35  99999988  8999998 8998765543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=98.57  E-value=2.1e-08  Score=75.85  Aligned_cols=49  Identities=16%  Similarity=0.451  Sum_probs=45.6

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|.++++|+|..|++.|..
T Consensus        37 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   85 (106)
T 2ee8_A           37 ERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQ   85 (106)
T ss_dssp             HHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSS
T ss_pred             HHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccC
Confidence            3468889999999999999999999999999999999999999999854

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.57  E-value=2.1e-08  Score=67.90  Aligned_cols=42  Identities=17%  Similarity=0.309  Sum_probs=38.1

Q ss_pred             cccccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccc
Q 047542           86 ESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALA  127 (270)
Q Consensus        86 ~~~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfk  127 (270)
                      ....++|+++++|.|.+|++.|.....|..|+++|++++||+
T Consensus        13 ~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A           13 EKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             hhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            344568999999999999999999999999999999999984

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.56  E-value=3.1e-08  Score=73.52  Aligned_cols=41  Identities=20%  Similarity=0.279  Sum_probs=37.2

Q ss_pred             ccCCCCcccCCC--CCcccCCchhhhhhh-hhccCCcccccccc
Q 047542           91 KQPKQKGFLCNF--CNKIFSTSQALGGHQ-NAHKQERALAKRRK  131 (270)
Q Consensus        91 ~HTgeKpf~C~~--CgKsF~sssaL~~Hq-r~HtgEKPfkCr~c  131 (270)
                      .++++|||+|.+  |+++|.....|..|+ ++|+++|||.|-+.
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            468999999976  999999999999997 78999999999763

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.54  E-value=3.2e-08  Score=60.44  Aligned_cols=33  Identities=27%  Similarity=0.367  Sum_probs=31.2

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCccccc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQERALAK  128 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkC  128 (270)
                      +||.|.+|++.|.....|..|+++|++++||.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            589999999999999999999999999999964

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.54  E-value=2.8e-08  Score=73.66  Aligned_cols=50  Identities=18%  Similarity=0.246  Sum_probs=46.2

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      ..++|.++++|.|.+|++.|.....|..|+++|.++++|+|..|++.|..
T Consensus        27 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   76 (96)
T 2dmd_A           27 HMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRN   76 (96)
T ss_dssp             HGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESS
T ss_pred             HHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCC
Confidence            34578899999999999999999999999999999999999999999864

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.53  E-value=1e-08  Score=82.80  Aligned_cols=87  Identities=22%  Similarity=0.265  Sum_probs=68.0

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhh-ccCCcc--------cccccccchhcc---ccCCCCCc---cCCCCCCCCC
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNA-HKQERA--------LAKRRKEMDMGA---LGHHHYPY---YPYSSSVAHQ  155 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~-HtgEKP--------fkCr~c~~~~~~---~~~~~~~~---~py~~~~~~~  155 (270)
                      ++...++|.|..|++.|.....|..|++. |.++++        |.|..|++.|..   |..|...+   .+|.|     
T Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C-----   93 (155)
T 2rpc_A           19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPC-----   93 (155)
T ss_dssp             CCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEEC-----
T ss_pred             echhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccC-----
Confidence            34567889999999999999999999997 888765        899999999854   33333322   35554     


Q ss_pred             CCCc--ccccccCCCCCCccccCCcCCCCCCCC
Q 047542          156 NPNF--YGSLFNRSSPLGVSMQPMIRKPSYPWV  186 (270)
Q Consensus       156 ~p~~--~G~~f~rs~~lgl~~hs~iHkp~~~~~  186 (270)
                        ..  ||+.|.+.  ..|+.|.++|....++.
T Consensus        94 --~~~~C~~~f~~~--~~L~~H~~~h~~~~~~~  122 (155)
T 2rpc_A           94 --PFPGCGKIFARS--ENLKIHKRTHTGEKPFK  122 (155)
T ss_dssp             --SCTTTCCEESCH--HHHHHHHTTTCSSCSBC
T ss_pred             --CcCCCCCccCCH--HHHHHHHHhhCCCCCcc
Confidence              34  99999988  88999999998775544

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.52  E-value=1.5e-08  Score=72.70  Aligned_cols=48  Identities=15%  Similarity=0.306  Sum_probs=44.9

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      ++|.++++|.|..|++.|.....|..|++.|.++++|+|..|++.|..
T Consensus        22 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   69 (82)
T 2kmk_A           22 LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQ   69 (82)
T ss_dssp             HHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESS
T ss_pred             HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCC
Confidence            467889999999999999999999999999999999999999998854

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.51  E-value=2.6e-08  Score=73.47  Aligned_cols=74  Identities=20%  Similarity=0.271  Sum_probs=57.2

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhccc---cCCCCCc--cCCCCCCCCCCCCcccccccCCCC
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGAL---GHHHYPY--YPYSSSVAHQNPNFYGSLFNRSSP  169 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~---~~~~~~~--~py~~~~~~~~p~~~G~~f~rs~~  169 (270)
                      ++||.|.+|++.|.....|..|+++|++++||.|..|++.|...   ..|...+  .+|.       |..|++.|...  
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~-------c~~C~~~f~~~--   71 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPIL-------EDKVEELLSKN--   71 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHH-------HHHHHHHHHHH--
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcch-------HHHHHHHHHHH--
Confidence            57999999999999999999999999999999999999998543   2222211  2332       34788888877  


Q ss_pred             CCccccCC
Q 047542          170 LGVSMQPM  177 (270)
Q Consensus       170 lgl~~hs~  177 (270)
                      ..|+.|..
T Consensus        72 ~~L~~H~~   79 (88)
T 1llm_C           72 YHLENEVA   79 (88)
T ss_dssp             HHHHHHHH
T ss_pred             hhhHHHHH
Confidence            77777754

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.51  E-value=4.5e-08  Score=70.39  Aligned_cols=41  Identities=24%  Similarity=0.460  Sum_probs=38.3

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAK  128 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkC  128 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|++++||+|
T Consensus        37 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           37 HRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             HHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             HHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34578999999999999999999999999999999999998

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.51  E-value=1.8e-08  Score=73.75  Aligned_cols=49  Identities=27%  Similarity=0.379  Sum_probs=45.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|.++++|.|..|++.|..
T Consensus        26 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   74 (90)
T 1a1h_A           26 IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFAR   74 (90)
T ss_dssp             HHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESS
T ss_pred             HHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCC
Confidence            3468889999999999999999999999999999999999999999854

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.48  E-value=3.7e-08  Score=75.11  Aligned_cols=49  Identities=16%  Similarity=0.205  Sum_probs=45.5

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .++|.++++|.|.+|++.|.....|..|+++|.++++|+|..|++.|..
T Consensus        29 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   77 (110)
T 2csh_A           29 MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMW   77 (110)
T ss_dssp             HHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESC
T ss_pred             HHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcC
Confidence            3468889999999999999999999999999999999999999999854

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.48  E-value=4.8e-08  Score=72.27  Aligned_cols=49  Identities=12%  Similarity=0.280  Sum_probs=45.3

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCC--cccccccccchhcc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQE--RALAKRRKEMDMGA  137 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgE--KPfkCr~c~~~~~~  137 (270)
                      .++|+++++|.|.+|++.|.....|..|++.|.++  ++|+|..|++.|..
T Consensus        27 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~   77 (95)
T 2yt9_A           27 KLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSR   77 (95)
T ss_dssp             HHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSS
T ss_pred             HHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCC
Confidence            35788999999999999999999999999999987  99999999999854

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=6.5e-08  Score=59.78  Aligned_cols=35  Identities=20%  Similarity=0.432  Sum_probs=32.6

Q ss_pred             cccCCCCcccCCCCCcccCCc-hhhhhhhhhccCCc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTS-QALGGHQNAHKQER  124 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~ss-saL~~Hqr~HtgEK  124 (270)
                      ++|+++++|.|.+|++.|... ..|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            478999999999999999999 99999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=8e-08  Score=59.02  Aligned_cols=35  Identities=14%  Similarity=0.290  Sum_probs=32.3

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      +.|+++++|.|.+|++.|.....|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            35889999999999999999999999999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.44  E-value=6.5e-08  Score=60.13  Aligned_cols=36  Identities=25%  Similarity=0.519  Sum_probs=33.4

Q ss_pred             cCCCCcccCC--CCCcccCCchhhhhhhhhccCCcccc
Q 047542           92 QPKQKGFLCN--FCNKIFSTSQALGGHQNAHKQERALA  127 (270)
Q Consensus        92 HTgeKpf~C~--~CgKsF~sssaL~~Hqr~HtgEKPfk  127 (270)
                      |+++++|.|.  .|++.|.....|..|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            6789999999  59999999999999999999999874

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=9.9e-08  Score=58.59  Aligned_cols=35  Identities=26%  Similarity=0.498  Sum_probs=32.4

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      +.|+++++|.|.+|++.|.....|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            36889999999999999999999999999999875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.43  E-value=1.3e-07  Score=58.20  Aligned_cols=35  Identities=29%  Similarity=0.445  Sum_probs=32.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCC
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      .++|++++||.|.+|++.|.....|..|+++|+++
T Consensus         3 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            46799999999999999999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=9.4e-08  Score=58.43  Aligned_cols=34  Identities=21%  Similarity=0.343  Sum_probs=32.0

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      +|+++++|.|.+|++.|.....|..|+++|+++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5889999999999999999999999999999875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=98.43  E-value=4.4e-08  Score=69.46  Aligned_cols=38  Identities=18%  Similarity=0.347  Sum_probs=34.3

Q ss_pred             ccccccCCCCcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           87 SIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        87 ~~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      ...++|++++||.|.+|++.|.....|..|+++|++|+
T Consensus        22 ~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C           22 RHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             HHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             HHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            34568999999999999999999999999999999985

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.42  E-value=7.7e-08  Score=70.14  Aligned_cols=49  Identities=18%  Similarity=0.356  Sum_probs=45.0

Q ss_pred             ccccCCCCcccCC--CCCcccCCchhhhhhhhhccCCcccccccccchhcc
Q 047542           89 RKKQPKQKGFLCN--FCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus        89 ~~~HTgeKpf~C~--~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .++|+++++|.|.  .|++.|.....|..|+++|+++++|+|..|++.|..
T Consensus        27 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   77 (89)
T 2wbs_A           27 LRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSR   77 (89)
T ss_dssp             HTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESS
T ss_pred             HHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCC
Confidence            3578899999997  599999999999999999999999999999999854

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=8.6e-08  Score=67.17  Aligned_cols=39  Identities=18%  Similarity=0.263  Sum_probs=22.8

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      ++|+++++|.|.+|++.|.....|..       +++|+|..|++.|
T Consensus        11 ~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f   49 (73)
T 2ctu_A           11 KIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDS   49 (73)
T ss_dssp             CCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTC
T ss_pred             HHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhh
Confidence            45666666666666666666655554       4556665555443

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.3e-07  Score=57.75  Aligned_cols=34  Identities=26%  Similarity=0.544  Sum_probs=31.9

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      .|+++++|.|.+|++.|.....|..|+++|++|+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5788999999999999999999999999999875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.37  E-value=9.7e-08  Score=71.09  Aligned_cols=49  Identities=16%  Similarity=0.282  Sum_probs=44.8

Q ss_pred             ccccCCCCcccCC--CCCcccCCchhhhhhhhhccCCcccccccccchhcc
Q 047542           89 RKKQPKQKGFLCN--FCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus        89 ~~~HTgeKpf~C~--~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .++|+++++|.|.  .|++.|.....|..|+++|+++++|+|..|++.|..
T Consensus        37 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   87 (100)
T 2ebt_A           37 LRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSR   87 (100)
T ss_dssp             HHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSS
T ss_pred             HHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCC
Confidence            3468899999996  599999999999999999999999999999999854

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=1.9e-07  Score=57.25  Aligned_cols=34  Identities=32%  Similarity=0.685  Sum_probs=31.4

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      .|+++++|.|.+|++.|.....|..|+++|+++|
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999999875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.33  E-value=5.8e-08  Score=58.70  Aligned_cols=32  Identities=34%  Similarity=0.424  Sum_probs=30.0

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCcccc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQERALA  127 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfk  127 (270)
                      +||.|.+|++.|.....|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCCC
Confidence            58999999999999999999999999999873

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.32  E-value=1.4e-07  Score=73.73  Aligned_cols=42  Identities=19%  Similarity=0.301  Sum_probs=38.5

Q ss_pred             cc---CCCCcccCCCCCcccCCchhhhhh-hhhccCCccccccccc
Q 047542           91 KQ---PKQKGFLCNFCNKIFSTSQALGGH-QNAHKQERALAKRRKE  132 (270)
Q Consensus        91 ~H---TgeKpf~C~~CgKsF~sssaL~~H-qr~HtgEKPfkCr~c~  132 (270)
                      +|   ++++||.|.+|++.|.....|..| +++|+++|||+|..+.
T Consensus        41 ~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           41 EHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             HCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             hCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            57   568999999999999999999999 8999999999998744

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.31  E-value=1.9e-07  Score=62.00  Aligned_cols=35  Identities=23%  Similarity=0.528  Sum_probs=30.2

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhh-hccCCcc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQN-AHKQERA  125 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr-~HtgEKP  125 (270)
                      +|+++++|.|.+|++.|.....|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            5899999999999999999999999999 9998754

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=2.2e-07  Score=57.76  Aligned_cols=34  Identities=18%  Similarity=0.278  Sum_probs=31.7

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhh-hhhccCC
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGH-QNAHKQE  123 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~H-qr~HtgE  123 (270)
                      ++|++++||.|..|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            479999999999999999999999999 9999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=2.6e-07  Score=59.77  Aligned_cols=34  Identities=15%  Similarity=0.178  Sum_probs=30.8

Q ss_pred             ccCCCCcccCCC--CCcccCCchhhhhhhhhccCCc
Q 047542           91 KQPKQKGFLCNF--CNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        91 ~HTgeKpf~C~~--CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      .++++|||.|.+  |+++|.....|..|+++|+++.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367899999986  9999999999999999999863

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.26  E-value=3.7e-07  Score=67.52  Aligned_cols=40  Identities=20%  Similarity=0.178  Sum_probs=25.9

Q ss_pred             cccCCCCCcccCCchhhhhhhhh-ccCCcc--------cccccccchhc
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNA-HKQERA--------LAKRRKEMDMG  136 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~-HtgEKP--------fkCr~c~~~~~  136 (270)
                      .|.|..|++.|.....|..|+++ |+++++        |.|..|++.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~   73 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFK   73 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCS
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccC
Confidence            35666666666666666666665 666665        66666666663

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.24  E-value=2.5e-07  Score=65.93  Aligned_cols=40  Identities=25%  Similarity=0.501  Sum_probs=36.6

Q ss_pred             ccccccCCCCcccCCCCCcccCCchhhhhhhhhccCCccc
Q 047542           87 SIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERAL  126 (270)
Q Consensus        87 ~~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPf  126 (270)
                      ...++|+++++|.|.+|++.|.....|..|+++|+++|||
T Consensus        35 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           35 SHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             HHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             HHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3445789999999999999999999999999999999987

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=8.2e-07  Score=62.07  Aligned_cols=67  Identities=7%  Similarity=-0.139  Sum_probs=52.7

Q ss_pred             CchhhhhhhhhccCCcccccccccchhccccCCCCCccCCCCCCCCCCCCcccccccCCCCCCccccCCcCCCCCCC
Q 047542          109 TSQALGGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPSYPW  185 (270)
Q Consensus       109 sssaL~~Hqr~HtgEKPfkCr~c~~~~~~~~~~~~~~~py~~~~~~~~p~~~G~~f~rs~~lgl~~hs~iHkp~~~~  185 (270)
                      ....|..|+++|.+++||.|..|++.|........ -.+|.       |..||+.|.+.  ..|+.|.++|....++
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-~~~~~-------C~~C~~~f~~~--~~l~~H~~~H~~~~~~   68 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-RKTPM-------CEKCRKDSCQE--AALNKDEGNESGKKTS   68 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-SSSCC-------CHHHHHTCSCC--CSSCCCSSCCCCCCCS
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-CCCCC-------CCCCChhhcCH--HHHHHHHHhhcCCCCC
Confidence            35678899999999999999999999876554333 23444       45899999988  8999999999876554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.22  E-value=4.2e-07  Score=56.50  Aligned_cols=34  Identities=29%  Similarity=0.635  Sum_probs=31.2

Q ss_pred             ccCCCCcccCCC--CCcccCCchhhhhhhhhccCCc
Q 047542           91 KQPKQKGFLCNF--CNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        91 ~HTgeKpf~C~~--CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      .|+++++|.|.+  |++.|.....|..|+++|+++|
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            378899999995  9999999999999999999875

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.17  E-value=4.7e-07  Score=58.09  Aligned_cols=33  Identities=30%  Similarity=0.466  Sum_probs=29.8

Q ss_pred             cCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccc
Q 047542           92 QPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRK  131 (270)
Q Consensus        92 HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c  131 (270)
                      +.++|||.|.+|+|+|.+.+.|..|+       ||.|.++
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~r   35 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSHR   35 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTTC
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcCC
Confidence            57899999999999999999999998       8888753

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=5.5e-07  Score=69.02  Aligned_cols=46  Identities=9%  Similarity=0.010  Sum_probs=41.0

Q ss_pred             cCCCCccc-CCCCCccc--CCchhhhhhhhhccCCcccccccccchhcc
Q 047542           92 QPKQKGFL-CNFCNKIF--STSQALGGHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus        92 HTgeKpf~-C~~CgKsF--~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      |.+.+++. |.+|++.|  .....|..|+++|++++||+|..|++.|..
T Consensus        44 h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~   92 (115)
T 2dmi_A           44 HYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFES   92 (115)
T ss_dssp             CCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSS
T ss_pred             ccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCC
Confidence            56666655 99999999  899999999999999999999999999964

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.13  E-value=6.7e-07  Score=67.94  Aligned_cols=42  Identities=12%  Similarity=0.251  Sum_probs=39.1

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .++|.|.+|++.|.....|..|++ |+++++|+|..|++.|..
T Consensus        40 ~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~   81 (107)
T 1wjp_A           40 RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKS   81 (107)
T ss_dssp             HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSS
T ss_pred             CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCC
Confidence            478999999999999999999996 999999999999999854

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.12  E-value=1e-06  Score=50.87  Aligned_cols=30  Identities=23%  Similarity=0.640  Sum_probs=27.8

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      ++||.|..|++.|.....|..|+++|+++|
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999999875

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.10  E-value=1.3e-06  Score=50.38  Aligned_cols=29  Identities=31%  Similarity=0.445  Sum_probs=27.1

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      +||.|..|++.|.....|..|+++|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.10  E-value=5.1e-07  Score=66.78  Aligned_cols=39  Identities=18%  Similarity=0.122  Sum_probs=36.7

Q ss_pred             cCCCCc--------ccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           92 QPKQKG--------FLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        92 HTgeKp--------f~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      |+++++        |.|.+|++.|.....|..|+++|++++||+|.+
T Consensus        49 H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           49 HVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             TTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             ccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            888887        999999999999999999999999999999963

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.08  E-value=1.3e-06  Score=63.17  Aligned_cols=40  Identities=15%  Similarity=0.387  Sum_probs=37.8

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      ++|.|.+|++.|.....|..|+++|.+++++.|..|+.++
T Consensus        46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           46 AAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             cceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            7999999999999999999999999999999999998754

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.07  E-value=1.6e-06  Score=49.81  Aligned_cols=29  Identities=28%  Similarity=0.781  Sum_probs=27.0

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.07  E-value=1.6e-06  Score=49.59  Aligned_cols=29  Identities=28%  Similarity=0.510  Sum_probs=27.1

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.05  E-value=2.3e-06  Score=49.33  Aligned_cols=30  Identities=20%  Similarity=0.444  Sum_probs=27.6

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCcc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQERA  125 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEKP  125 (270)
                      ++|.|.+|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            579999999999999999999999998764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.04  E-value=1.3e-06  Score=57.45  Aligned_cols=35  Identities=29%  Similarity=0.483  Sum_probs=32.1

Q ss_pred             cccCCCCcccCC--CCCcccCCchhhhhhhhhccCCc
Q 047542           90 KKQPKQKGFLCN--FCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        90 ~~HTgeKpf~C~--~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      .+|++++||.|.  .|++.|.....|..|+++|+++|
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            468999999996  69999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.04  E-value=2.3e-06  Score=61.98  Aligned_cols=41  Identities=20%  Similarity=0.368  Sum_probs=34.6

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCCccccccccc
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKE  132 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~  132 (270)
                      .|+++|||.|.+|++.|.....|..|+++|++++ ..|..+.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            4788999999999999999999999999999874 3444433

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.04  E-value=2.9e-06  Score=50.35  Aligned_cols=30  Identities=23%  Similarity=0.610  Sum_probs=27.8

Q ss_pred             CCcccCC--CCCcccCCchhhhhhhhhccCCc
Q 047542           95 QKGFLCN--FCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        95 eKpf~C~--~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789999  89999999999999999999875

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.04  E-value=1.3e-06  Score=50.07  Aligned_cols=29  Identities=34%  Similarity=0.545  Sum_probs=27.1

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      +||.|.+|++.|.....|..|+++|+++|
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999999875

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.26  E-value=7.8e-07  Score=51.64  Aligned_cols=30  Identities=30%  Similarity=0.627  Sum_probs=27.5

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      ++||.|.+|++.|.....|..|+++|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            468999999999999999999999998874

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.25  E-value=8.3e-07  Score=51.48  Aligned_cols=29  Identities=31%  Similarity=0.590  Sum_probs=27.0

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      +||.|.+|++.|.....|..|+++|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            58999999999999999999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.98  E-value=3e-06  Score=49.98  Aligned_cols=29  Identities=34%  Similarity=0.849  Sum_probs=27.0

Q ss_pred             CcccCC--CCCcccCCchhhhhhhhhccCCc
Q 047542           96 KGFLCN--FCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        96 Kpf~C~--~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      +||.|.  .|++.|.....|..|+++|+++|
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  89999999999999999999875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.97  E-value=9.2e-08  Score=68.72  Aligned_cols=62  Identities=8%  Similarity=0.070  Sum_probs=46.4

Q ss_pred             hhhhhhhhccCCcccccccccchhcc---ccCCCC-Cc----cCCCCCCCCCCCCcccccccCCCCCCccccCCcCCCC
Q 047542          112 ALGGHQNAHKQERALAKRRKEMDMGA---LGHHHY-PY----YPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       112 aL~~Hqr~HtgEKPfkCr~c~~~~~~---~~~~~~-~~----~py~~~~~~~~p~~~G~~f~rs~~lgl~~hs~iHkp~  182 (270)
                      +|..|+++|++++||+|..|++.|..   |..|.. ++    .+|.       |..||+.|.+.  ..|+.|.++|.+.
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~-------C~~C~~~f~~~--~~L~~H~~~~H~~   71 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFH-------CPHCDTVIARK--SDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEE-------CSSSSCEESSH--HHHHHHHHHTSCC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccC-------CCCCCCccCCH--HHHHHHHHHhCCC
Confidence            46789999999999999999999954   322221 11    2444       45899999988  8899999876543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.96  E-value=3.8e-06  Score=48.69  Aligned_cols=29  Identities=31%  Similarity=0.661  Sum_probs=26.8

Q ss_pred             CcccCCCCCcccCCchhhhhh-hhhccCCc
Q 047542           96 KGFLCNFCNKIFSTSQALGGH-QNAHKQER  124 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~H-qr~HtgEK  124 (270)
                      +||.|..|++.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            589999999999999999999 89999875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=97.96  E-value=4.9e-07  Score=66.46  Aligned_cols=48  Identities=17%  Similarity=0.379  Sum_probs=43.6

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhcc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|.+ ++|.|..|++.|..
T Consensus        23 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~   70 (88)
T 1llm_C           23 IRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSK   70 (88)
T ss_dssp             HHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHH
Confidence            3578999999999999999999999999999985 89999999998854

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.89  E-value=4.2e-06  Score=58.76  Aligned_cols=40  Identities=15%  Similarity=0.285  Sum_probs=35.9

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALA  127 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfk  127 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|.+++|..
T Consensus        28 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A           28 HERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             HHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             HHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            3457999999999999999999999999999999998753

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.88  E-value=4.3e-06  Score=47.91  Aligned_cols=28  Identities=25%  Similarity=0.572  Sum_probs=25.8

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccC
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQ  122 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~Htg  122 (270)
                      +++|.|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999999874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.87  E-value=6.1e-06  Score=46.72  Aligned_cols=27  Identities=33%  Similarity=0.752  Sum_probs=24.0

Q ss_pred             cccCCCCCcccCCchhhhhhhhhccCC
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      ||.|.+|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999999864

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.86  E-value=4.9e-06  Score=47.47  Aligned_cols=27  Identities=26%  Similarity=0.493  Sum_probs=25.1

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhcc
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999999885

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=97.86  E-value=2.4e-06  Score=61.23  Aligned_cols=47  Identities=19%  Similarity=0.318  Sum_probs=42.3

Q ss_pred             ccccCCCCcccCCC--CCcccCCchhhhhhhhhccCCccccccc---ccchhccc
Q 047542           89 RKKQPKQKGFLCNF--CNKIFSTSQALGGHQNAHKQERALAKRR---KEMDMGAL  138 (270)
Q Consensus        89 ~~~HTgeKpf~C~~--CgKsF~sssaL~~Hqr~HtgEKPfkCr~---c~~~~~~~  138 (270)
                      .++|+++++|.|.+  |++.|.....|..|+++|++   |.|..   |++.|...
T Consensus        23 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~   74 (85)
T 2j7j_A           23 QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTW   74 (85)
T ss_dssp             HHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSH
T ss_pred             HHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCH
Confidence            35788999999998  99999999999999999998   99999   99988543

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=97.84  E-value=5.1e-06  Score=55.61  Aligned_cols=37  Identities=19%  Similarity=0.465  Sum_probs=33.6

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      ..++|+++++|.|.+|++.|.....|..|+++|.++|
T Consensus        20 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A           20 HIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             HHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             HHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            3457899999999999999999999999999999876

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.81  E-value=3.9e-06  Score=61.25  Aligned_cols=46  Identities=13%  Similarity=0.110  Sum_probs=40.8

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchh
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      ..++|.+++++.|.+|++.|. ...|..|+ .|.+++||.|..|++.|
T Consensus         8 H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~   53 (75)
T 2d9k_A            8 HEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNV   53 (75)
T ss_dssp             CCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEE
T ss_pred             hCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcC
Confidence            345789999999999999995 88999999 89999999999888764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.80  E-value=4.9e-06  Score=47.79  Aligned_cols=27  Identities=15%  Similarity=0.424  Sum_probs=25.0

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhcc
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            478999999999999999999999884

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=97.78  E-value=1.9e-06  Score=57.97  Aligned_cols=32  Identities=6%  Similarity=-0.103  Sum_probs=28.1

Q ss_pred             CcccCCchhhhhhhhhccCCcccccccccchh
Q 047542          104 NKIFSTSQALGGHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus       104 gKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      ++.|.....|..|+++|++++||.|..|++.|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f   34 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVI   34 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEE
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCccc
Confidence            46788999999999999999999999877665

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=97.68  E-value=1.4e-05  Score=60.30  Aligned_cols=39  Identities=26%  Similarity=0.446  Sum_probs=33.7

Q ss_pred             cccccccCCCCcccCCCCCcccCCchhhhhhh-hhccCCc
Q 047542           86 ESIRKKQPKQKGFLCNFCNKIFSTSQALGGHQ-NAHKQER  124 (270)
Q Consensus        86 ~~~~~~HTgeKpf~C~~CgKsF~sssaL~~Hq-r~HtgEK  124 (270)
                      ....++|++++||.|.+|++.|.....|..|+ ++|++|.
T Consensus        45 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           45 ERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             HHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             hhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            33445899999999999999999999999995 6898875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.83  E-value=6.3e-06  Score=46.58  Aligned_cols=26  Identities=35%  Similarity=0.687  Sum_probs=24.1

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhcc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      |||.|.+|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999884

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.64  E-value=3.2e-06  Score=58.89  Aligned_cols=48  Identities=4%  Similarity=0.017  Sum_probs=35.7

Q ss_pred             hhhhhhhccCCcccccccccchhccccCCCCCc---cCCCCCCCCCCCCcccccccCC
Q 047542          113 LGGHQNAHKQERALAKRRKEMDMGALGHHHYPY---YPYSSSVAHQNPNFYGSLFNRS  167 (270)
Q Consensus       113 L~~Hqr~HtgEKPfkCr~c~~~~~~~~~~~~~~---~py~~~~~~~~p~~~G~~f~rs  167 (270)
                      |..|+++|++++||+|..|++.|.....+...|   .||.|       ..||+.|.+.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C-------~~C~k~f~~~   52 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQLFDPMTGTFRC-------TFCHTEVEED   52 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHHHEETTTTEEBC-------SSSCCBCEEC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhHhhcCCCCCEEC-------CCCCCccccC
Confidence            567999999999999999999986533322222   35544       5899999876

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.64  E-value=6.3e-06  Score=62.20  Aligned_cols=43  Identities=21%  Similarity=0.326  Sum_probs=37.7

Q ss_pred             cccccCC-CCcccCCCCCcccCCchhhhhhhhhccCCccccccc
Q 047542           88 IRKKQPK-QKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRR  130 (270)
Q Consensus        88 ~~~~HTg-eKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~  130 (270)
                      ..++|++ +++|.|.+|++.|.....|..|+++|++++|+....
T Consensus        44 H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~~   87 (98)
T 2gqj_A           44 HMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAEA   87 (98)
T ss_dssp             HHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCCC
T ss_pred             HHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            3457888 899999999999999999999999999999976543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.63  E-value=1.5e-05  Score=56.28  Aligned_cols=36  Identities=28%  Similarity=0.477  Sum_probs=33.0

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|+++.
T Consensus        34 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           34 QRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             HHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             HHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            357899999999999999999999999999998764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.62  E-value=2.1e-05  Score=59.86  Aligned_cols=40  Identities=20%  Similarity=0.292  Sum_probs=34.3

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhh-hhhccCCccccc
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGH-QNAHKQERALAK  128 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~H-qr~HtgEKPfkC  128 (270)
                      ..++| ++++|.|.+|++.|.....|..| +++|+++..|.+
T Consensus        54 H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           54 HMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             HHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             HHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            44578 99999999999999999999999 999987655544

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.45  E-value=3.6e-05  Score=43.89  Aligned_cols=27  Identities=22%  Similarity=0.610  Sum_probs=24.9

Q ss_pred             CcccCC--CCCcccCCchhhhhhhhhccC
Q 047542           96 KGFLCN--FCNKIFSTSQALGGHQNAHKQ  122 (270)
Q Consensus        96 Kpf~C~--~CgKsF~sssaL~~Hqr~Htg  122 (270)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            579999  999999999999999999974

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=97.39  E-value=5.6e-05  Score=51.02  Aligned_cols=36  Identities=22%  Similarity=0.521  Sum_probs=31.8

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhh-hhccCC
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQ-NAHKQE  123 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hq-r~HtgE  123 (270)
                      ..++|+++++|.|.+|++.|.....|..|+ ++|+++
T Consensus        21 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A           21 HYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             HHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             HHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            345789999999999999999999999995 789875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=97.37  E-value=3.4e-05  Score=51.48  Aligned_cols=34  Identities=21%  Similarity=0.470  Sum_probs=30.3

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhccC
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQ  122 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~Htg  122 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|.+
T Consensus        24 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C           24 LRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             HHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             HHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            4578999999999999999999999999998863

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=97.32  E-value=4.1e-05  Score=53.77  Aligned_cols=33  Identities=33%  Similarity=0.549  Sum_probs=30.4

Q ss_pred             ccccCCCCcccCCCCCcccCCchhhhhhhhhcc
Q 047542           89 RKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        89 ~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      .++|+++++|.|.+|++.|.....|..|+++|+
T Consensus        41 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           41 IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             HHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             HHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            457899999999999999999999999999885

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.27  E-value=4.8e-05  Score=47.65  Aligned_cols=22  Identities=9%  Similarity=0.107  Sum_probs=18.3

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      +|+++|++++||+|..|++.|.
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~   22 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFS   22 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBS
T ss_pred             CCccccCCCCCeeCCCccchhC
Confidence            4889999999999998777653

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.26  E-value=2.9e-05  Score=49.64  Aligned_cols=21  Identities=5%  Similarity=-0.002  Sum_probs=18.1

Q ss_pred             hhhhhccCCcccccccccchh
Q 047542          115 GHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      .|+++|++++||+|..|++.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F   22 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAF   22 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEE
T ss_pred             CCCcccCCCcCeECCCCCccc
Confidence            589999999999999877665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.19  E-value=0.00012  Score=50.80  Aligned_cols=33  Identities=15%  Similarity=0.154  Sum_probs=30.7

Q ss_pred             CCCCcccCC-CCCcccCCchhhhhhhhhccCCcc
Q 047542           93 PKQKGFLCN-FCNKIFSTSQALGGHQNAHKQERA  125 (270)
Q Consensus        93 TgeKpf~C~-~CgKsF~sssaL~~Hqr~HtgEKP  125 (270)
                      ++++||.|. .|++.|.....|..|+++|..+++
T Consensus        32 ~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           32 CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            789999999 999999999999999999987765

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.19  E-value=4e-05  Score=48.73  Aligned_cols=22  Identities=5%  Similarity=-0.002  Sum_probs=18.6

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFT   23 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEES
T ss_pred             CCccccCCCCCeECCCCCchhC
Confidence            6889999999999998776653

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.16  E-value=6.4e-05  Score=48.19  Aligned_cols=22  Identities=5%  Similarity=-0.064  Sum_probs=18.5

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|+++++|+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~   23 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFT   23 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCS
T ss_pred             CCCcCCCCCcCeECCCCCcccC
Confidence            5889999999999998777653

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.15  E-value=8.1e-05  Score=47.92  Aligned_cols=22  Identities=5%  Similarity=-0.041  Sum_probs=18.3

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFR   23 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCS
T ss_pred             CCCCCCCCCcccCCCCCCcccC
Confidence            4789999999999998776653

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=97.15  E-value=4.6e-05  Score=46.40  Aligned_cols=22  Identities=5%  Similarity=0.077  Sum_probs=18.3

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~   22 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFS   22 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBS
T ss_pred             CCCCcCCCCCCccCCCCCcccC
Confidence            3788999999999998877653

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.14  E-value=7.4e-05  Score=46.96  Aligned_cols=22  Identities=9%  Similarity=0.063  Sum_probs=18.0

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~   22 (42)
T 2eos_A            1 GSSGSSGGEKPYPCEICGTRFR   22 (42)
T ss_dssp             CCCSCCSSSCCBCCSSSCCCBS
T ss_pred             CCCcccCCCCCEECCCCCCccC
Confidence            3788999999999998776653

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.13  E-value=6.1e-05  Score=48.32  Aligned_cols=22  Identities=0%  Similarity=-0.065  Sum_probs=18.4

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFS   23 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCS
T ss_pred             CcccccCCCCCeECCCCCcccC
Confidence            5889999999999998776653

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.12  E-value=5.2e-05  Score=48.74  Aligned_cols=22  Identities=9%  Similarity=0.012  Sum_probs=18.8

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~   23 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFA   23 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEES
T ss_pred             CcccCcCCCCCeECCcCCcccC
Confidence            5889999999999998877663

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.12  E-value=5e-05  Score=48.82  Aligned_cols=22  Identities=0%  Similarity=-0.047  Sum_probs=18.3

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFI   23 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCS
T ss_pred             CCCCCcCCCCCcCCCCcCchhC
Confidence            5889999999999998776653

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=97.12  E-value=5.7e-05  Score=48.43  Aligned_cols=22  Identities=14%  Similarity=0.131  Sum_probs=18.8

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~   23 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFS   23 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCS
T ss_pred             CCcCccCCCcCeECCCCCcccC
Confidence            5889999999999998877663

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.12  E-value=7e-05  Score=48.01  Aligned_cols=22  Identities=0%  Similarity=-0.100  Sum_probs=18.5

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~   23 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFT   23 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCS
T ss_pred             CCCcCCCCCcCeECCCCCCeeC
Confidence            5889999999999998877653

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.11  E-value=6.8e-05  Score=48.18  Aligned_cols=22  Identities=5%  Similarity=0.010  Sum_probs=18.6

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFT   23 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBS
T ss_pred             CcccCCCCCcCCCCCCCCcccC
Confidence            5889999999999998877653

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.11  E-value=6.7e-05  Score=47.99  Aligned_cols=22  Identities=9%  Similarity=0.054  Sum_probs=18.8

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~   23 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFS   23 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCS
T ss_pred             CCccccCCCCCeeCCCCCchhC
Confidence            5889999999999998877663

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.11  E-value=6.5e-05  Score=48.19  Aligned_cols=22  Identities=5%  Similarity=-0.064  Sum_probs=18.4

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~   23 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFT   23 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccC
Confidence            5889999999999998776653

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.10  E-value=8.4e-05  Score=47.63  Aligned_cols=22  Identities=5%  Similarity=-0.007  Sum_probs=18.8

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~   23 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYN   23 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEES
T ss_pred             CCCCCCCCCCCeECCCCCcccC
Confidence            5889999999999998877664

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.09  E-value=7e-05  Score=47.91  Aligned_cols=22  Identities=5%  Similarity=-0.002  Sum_probs=18.8

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFS   23 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCS
T ss_pred             CCCcCCCCCcCcCCCCCCCccC
Confidence            5889999999999998877663

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.09  E-value=7.4e-05  Score=48.01  Aligned_cols=21  Identities=10%  Similarity=0.199  Sum_probs=17.9

Q ss_pred             hhhhhccCCcccccccccchh
Q 047542          115 GHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      .|+++|++++||+|..|++.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f   22 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTF   22 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEE
T ss_pred             CCccccCCCCCEECcCCCCcC
Confidence            588999999999999777655

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.09  E-value=7.7e-05  Score=47.81  Aligned_cols=22  Identities=5%  Similarity=-0.022  Sum_probs=18.7

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFS   23 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBS
T ss_pred             CCCCCcCCCCCeECCCCCceeC
Confidence            5889999999999998877663

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.07  E-value=0.00012  Score=52.09  Aligned_cols=41  Identities=22%  Similarity=0.519  Sum_probs=34.6

Q ss_pred             cccCC---CCcccCCCCCcccCCchhhhhhh-hhccCCccccccc
Q 047542           90 KKQPK---QKGFLCNFCNKIFSTSQALGGHQ-NAHKQERALAKRR  130 (270)
Q Consensus        90 ~~HTg---eKpf~C~~CgKsF~sssaL~~Hq-r~HtgEKPfkCr~  130 (270)
                      ++|++   +++|.|.+|++.|.....|..|+ +.|.++++.....
T Consensus        28 ~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~   72 (78)
T 2d9h_A           28 RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQES   72 (78)
T ss_dssp             HHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSSS
T ss_pred             HHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcccc
Confidence            46765   89999999999999999999998 6788888766543

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.07  E-value=6.8e-05  Score=47.41  Aligned_cols=22  Identities=0%  Similarity=-0.100  Sum_probs=18.5

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFR   23 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCCccC
Confidence            5889999999999998777653

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.07  E-value=7.5e-05  Score=47.87  Aligned_cols=22  Identities=5%  Similarity=-0.084  Sum_probs=18.5

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFT   23 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCS
T ss_pred             CCCCCCCCCCCEECCccCcccC
Confidence            5889999999999998877653

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.07  E-value=7.3e-05  Score=47.94  Aligned_cols=22  Identities=5%  Similarity=-0.023  Sum_probs=18.4

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFR   23 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCS
T ss_pred             CcccccCCCCCeECCcCChhhC
Confidence            5889999999999998776653

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=97.05  E-value=7.3e-05  Score=46.89  Aligned_cols=21  Identities=5%  Similarity=-0.039  Sum_probs=17.7

Q ss_pred             hhhhccCCcccccccccchhc
Q 047542          116 HQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       116 Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      |+++|++++||+|..|++.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~   21 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFN   21 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEES
T ss_pred             CCCCCCCCCCccCCCcChhhC
Confidence            678999999999998877653

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.05  E-value=5.8e-05  Score=47.84  Aligned_cols=22  Identities=5%  Similarity=-0.109  Sum_probs=18.9

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFS   23 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECS
T ss_pred             CCccccCCCcCeeCCCCCCccC
Confidence            5899999999999998887663

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.05  E-value=6.8e-05  Score=48.09  Aligned_cols=22  Identities=5%  Similarity=-0.041  Sum_probs=19.0

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      +|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFT   23 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEES
T ss_pred             CCCCCCCCCCCeECCCCCchhC
Confidence            5889999999999998887664

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=97.04  E-value=0.00023  Score=48.81  Aligned_cols=31  Identities=23%  Similarity=0.478  Sum_probs=28.6

Q ss_pred             c-CCCCcccCCCCCcccCCchhhhhhhhhccC
Q 047542           92 Q-PKQKGFLCNFCNKIFSTSQALGGHQNAHKQ  122 (270)
Q Consensus        92 H-TgeKpf~C~~CgKsF~sssaL~~Hqr~Htg  122 (270)
                      | +++++|.|.+|++.|.....|..|++.|.+
T Consensus        34 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           34 HKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             SSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            6 689999999999999999999999998865

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.04  E-value=7.3e-05  Score=47.92  Aligned_cols=22  Identities=5%  Similarity=-0.062  Sum_probs=19.0

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFR   23 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEES
T ss_pred             CcccCCCCCCCeECCCCCchhC
Confidence            5889999999999998887764

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.03  E-value=7e-05  Score=46.86  Aligned_cols=21  Identities=5%  Similarity=0.037  Sum_probs=17.8

Q ss_pred             hhhhccCCcccccccccchhc
Q 047542          116 HQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       116 Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      |+++|++++||+|..|++.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~   21 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFS   21 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCS
T ss_pred             CCcCcCCCCCeECCCCCCccC
Confidence            678899999999998877664

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=7.4e-05  Score=47.78  Aligned_cols=22  Identities=5%  Similarity=-0.076  Sum_probs=18.5

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|+++++|+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFI   23 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCS
T ss_pred             ccccCCCCCCCcCCCCCCchhC
Confidence            5889999999999998777653

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=8.2e-05  Score=47.57  Aligned_cols=22  Identities=5%  Similarity=-0.070  Sum_probs=18.8

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFI   23 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEES
T ss_pred             CCCCCCCCCcCEECCCCChhhC
Confidence            5889999999999998877663

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=97.02  E-value=7.8e-05  Score=47.66  Aligned_cols=22  Identities=0%  Similarity=-0.046  Sum_probs=18.8

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFS   23 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEES
T ss_pred             ccccCCCCCCceECCCCCchhC
Confidence            5889999999999998877663

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=9.6e-05  Score=47.45  Aligned_cols=22  Identities=5%  Similarity=-0.022  Sum_probs=18.6

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFS   23 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCS
T ss_pred             CCccccCCCCCeECCCCCcccC
Confidence            5889999999999998877653

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=9.3e-05  Score=47.52  Aligned_cols=22  Identities=5%  Similarity=-0.003  Sum_probs=18.7

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFS   23 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCS
T ss_pred             CCCcCcCCCCCcCCCccChhhC
Confidence            5889999999999998877663

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=0.00015  Score=46.58  Aligned_cols=21  Identities=5%  Similarity=-0.031  Sum_probs=17.5

Q ss_pred             hhhhhccCCcccccccccchh
Q 047542          115 GHQNAHKQERALAKRRKEMDM  135 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~  135 (270)
                      .|+++|++++||+|..|++.|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F   22 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAF   22 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBC
T ss_pred             CCCCCcCCCCCcCCCCcCchh
Confidence            478899999999998777665

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=8.3e-05  Score=47.75  Aligned_cols=22  Identities=5%  Similarity=-0.040  Sum_probs=18.7

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~   23 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYN   23 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCS
T ss_pred             CCCCCCCCCCCeeCcccCchhC
Confidence            5889999999999998877663

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.01  E-value=7.7e-05  Score=47.34  Aligned_cols=22  Identities=0%  Similarity=0.045  Sum_probs=18.6

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFN   23 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEES
T ss_pred             CcccccCCCCCeECCCCCCccC
Confidence            5889999999999998877653

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.01  E-value=7.4e-05  Score=48.01  Aligned_cols=22  Identities=0%  Similarity=-0.079  Sum_probs=18.9

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~   23 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFT   23 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEES
T ss_pred             ccccccCCCCCeECCCCCchhC
Confidence            5889999999999998887764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.01  E-value=6.5e-05  Score=48.16  Aligned_cols=22  Identities=9%  Similarity=-0.064  Sum_probs=18.8

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|+++++|+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~   23 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFI   23 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEES
T ss_pred             CCCcccCCCCCCCCCCCCcccC
Confidence            5889999999999998877663

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.01  E-value=5.2e-05  Score=48.63  Aligned_cols=22  Identities=5%  Similarity=-0.044  Sum_probs=19.2

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      +|+++|+++++|+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFT   23 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEES
T ss_pred             CcccCCCCCcCeECCCCChhhC
Confidence            5899999999999998887764

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=97.00  E-value=8e-05  Score=47.62  Aligned_cols=22  Identities=5%  Similarity=0.027  Sum_probs=19.1

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFR   23 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEES
T ss_pred             CCCCCCCCCcCeECCccccccC
Confidence            5889999999999998887764

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=97.00  E-value=6.4e-05  Score=48.19  Aligned_cols=22  Identities=5%  Similarity=-0.055  Sum_probs=19.0

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFS   23 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEES
T ss_pred             CCccCCCCCcCcCCCCCcchhC
Confidence            5889999999999998887763

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.00  E-value=7.4e-05  Score=47.79  Aligned_cols=22  Identities=5%  Similarity=-0.011  Sum_probs=19.0

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~   23 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFC   23 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEES
T ss_pred             CccccCCCCCCeECCCcCcccC
Confidence            5889999999999998887764

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.99  E-value=7.9e-05  Score=47.75  Aligned_cols=22  Identities=5%  Similarity=-0.068  Sum_probs=18.8

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|+++++|+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFI   23 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEES
T ss_pred             CCCCCCCCCcCccCCCccchhC
Confidence            5889999999999998887663

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.99  E-value=8.1e-05  Score=47.70  Aligned_cols=22  Identities=5%  Similarity=-0.058  Sum_probs=18.9

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~   23 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFR   23 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEES
T ss_pred             CCCcCCCCCCCeECCCCCchhC
Confidence            5889999999999998887764

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=96.99  E-value=8.5e-05  Score=47.71  Aligned_cols=22  Identities=5%  Similarity=-0.000  Sum_probs=18.6

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFS   23 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBS
T ss_pred             CCCCCCCCCCCcccCccCcccC
Confidence            5889999999999998877653

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.97  E-value=7e-05  Score=48.01  Aligned_cols=22  Identities=5%  Similarity=-0.040  Sum_probs=19.1

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFS   23 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEES
T ss_pred             CccCCcCCCCCeeCCCcCCccC
Confidence            5889999999999998887764

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.95  E-value=8.5e-05  Score=47.48  Aligned_cols=22  Identities=5%  Similarity=-0.023  Sum_probs=18.8

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|+++++|+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~   23 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFA   23 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEES
T ss_pred             CCccCCCCCCCeECCCCCCccC
Confidence            5889999999999998877663

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.95  E-value=8.4e-05  Score=47.51  Aligned_cols=22  Identities=9%  Similarity=0.057  Sum_probs=19.1

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFG   23 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEES
T ss_pred             CCCCCCCCCCCeECCCCChhhC
Confidence            5899999999999998887764

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.95  E-value=6.8e-05  Score=47.98  Aligned_cols=22  Identities=5%  Similarity=0.025  Sum_probs=19.1

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFS   23 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCS
T ss_pred             CCcccCCCCCCeECCCCCCccC
Confidence            5889999999999998887764

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.94  E-value=7.5e-05  Score=47.76  Aligned_cols=22  Identities=5%  Similarity=-0.064  Sum_probs=19.1

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~   23 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFT   23 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECS
T ss_pred             CCCCCCCCCCCeECCCcChhhC
Confidence            5889999999999998887764

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.94  E-value=6.8e-05  Score=47.98  Aligned_cols=22  Identities=5%  Similarity=0.065  Sum_probs=18.9

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFN   23 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEES
T ss_pred             CCCCCCCCCCCcCCCCCCcccC
Confidence            5889999999999998887764

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.94  E-value=9.4e-05  Score=47.28  Aligned_cols=22  Identities=5%  Similarity=0.021  Sum_probs=19.0

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFS   23 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECS
T ss_pred             CcccCCCCCCCeECCCCChhhC
Confidence            5889999999999998887764

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.94  E-value=7e-05  Score=47.56  Aligned_cols=23  Identities=0%  Similarity=-0.041  Sum_probs=19.3

Q ss_pred             hhhhhccCCcccccccccchhcc
Q 047542          115 GHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .|+++|++++||+|..|++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~   24 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTR   24 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESS
T ss_pred             CCCcCCCCCCCeECcccCcccCC
Confidence            58899999999999988877643

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.94  E-value=9.3e-05  Score=47.42  Aligned_cols=22  Identities=5%  Similarity=0.007  Sum_probs=19.2

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|+++++|+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~   23 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFT   23 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEES
T ss_pred             CcccCCCCCCCeeCCCCCcccC
Confidence            5899999999999998887764

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.93  E-value=5.2e-05  Score=48.66  Aligned_cols=22  Identities=5%  Similarity=-0.003  Sum_probs=18.9

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~   23 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFT   23 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEES
T ss_pred             CCCCCCCCCcCeECCCCCcccC
Confidence            5889999999999998887663

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.91  E-value=8.1e-05  Score=47.70  Aligned_cols=22  Identities=5%  Similarity=-0.056  Sum_probs=19.1

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFT   23 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEES
T ss_pred             CCCCCCCCCcCcCCCCCCcccC
Confidence            5889999999999998887764

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=96.91  E-value=5.2e-05  Score=48.77  Aligned_cols=22  Identities=5%  Similarity=0.033  Sum_probs=19.1

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~   23 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFS   23 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEES
T ss_pred             CCCCCCCCCCCEECCCCCcccC
Confidence            5889999999999998887764

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.90  E-value=0.0001  Score=47.32  Aligned_cols=22  Identities=0%  Similarity=-0.070  Sum_probs=19.2

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      +|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~   23 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFT   23 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEES
T ss_pred             CCcCCCCCCCCeECCcCCCccC
Confidence            5889999999999998887764

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.89  E-value=9.4e-05  Score=47.28  Aligned_cols=22  Identities=5%  Similarity=-0.068  Sum_probs=18.9

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~   23 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFC   23 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEES
T ss_pred             cCcccCCCCCCeeCCCCCCccC
Confidence            5889999999999998877664

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.89  E-value=8.1e-05  Score=47.70  Aligned_cols=22  Identities=5%  Similarity=-0.047  Sum_probs=18.9

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~   23 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFC   23 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCS
T ss_pred             CCCCCCCCCCCcCCCcCCchhC
Confidence            5889999999999998887764

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.88  E-value=8.8e-05  Score=47.53  Aligned_cols=22  Identities=5%  Similarity=0.013  Sum_probs=19.1

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~   23 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYN   23 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEES
T ss_pred             CCCcCCCCCCCeECCCCCCccC
Confidence            5889999999999998887764

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=96.88  E-value=9.9e-05  Score=47.39  Aligned_cols=22  Identities=5%  Similarity=-0.041  Sum_probs=18.9

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|+++++|+|..|++.|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~   23 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFS   23 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEES
T ss_pred             CCCCCCCCCCCeECCCCCcccC
Confidence            5889999999999998887764

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.88  E-value=6.9e-05  Score=48.04  Aligned_cols=22  Identities=5%  Similarity=-0.064  Sum_probs=19.0

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFT   23 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEES
T ss_pred             CcCcCCCCCCCeECCcCCchhC
Confidence            5889999999999998887764

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=96.86  E-value=7.6e-05  Score=47.94  Aligned_cols=22  Identities=5%  Similarity=0.040  Sum_probs=19.0

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      +|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~   23 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFS   23 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCS
T ss_pred             CCCCccCCCCceECCCCCchhC
Confidence            5889999999999998887764

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.85  E-value=6.7e-05  Score=48.20  Aligned_cols=22  Identities=5%  Similarity=-0.058  Sum_probs=18.9

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFK   23 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEES
T ss_pred             CCccccCCCcCcCCCCCCCccC
Confidence            5889999999999998887764

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.83  E-value=5.3e-05  Score=48.71  Aligned_cols=22  Identities=5%  Similarity=-0.071  Sum_probs=19.3

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      +|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFV   23 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEES
T ss_pred             CccccCCCCCCeECcccChhhC
Confidence            5899999999999998887764

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.83  E-value=7e-05  Score=47.92  Aligned_cols=23  Identities=9%  Similarity=-0.062  Sum_probs=19.6

Q ss_pred             hhhhhccCCcccccccccchhcc
Q 047542          115 GHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .|+++|++++||+|..|++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~   24 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQ   24 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESS
T ss_pred             CCcCCcCCCCCeeCCCCChhhCC
Confidence            58999999999999988877643

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=96.82  E-value=0.00027  Score=49.43  Aligned_cols=33  Identities=27%  Similarity=0.670  Sum_probs=29.2

Q ss_pred             cccccCCCCcccCCC--CCcccCCchhhhhhhhhc
Q 047542           88 IRKKQPKQKGFLCNF--CNKIFSTSQALGGHQNAH  120 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~--CgKsF~sssaL~~Hqr~H  120 (270)
                      ..++|+++++|.|.+  |++.|.....|..|+++|
T Consensus        38 H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           38 HTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             HHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             HHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            335799999999975  999999999999999876

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.82  E-value=8.2e-05  Score=47.01  Aligned_cols=22  Identities=5%  Similarity=0.042  Sum_probs=18.9

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFN   23 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEES
T ss_pred             CCccCCCCCCCeECCCCCcccC
Confidence            5889999999999998887664

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.82  E-value=6.8e-05  Score=47.96  Aligned_cols=22  Identities=5%  Similarity=-0.023  Sum_probs=19.0

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFR   23 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEES
T ss_pred             CccCCCCCCCCeeccccCChhc
Confidence            5889999999999998887764

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.81  E-value=6.9e-05  Score=48.06  Aligned_cols=22  Identities=5%  Similarity=-0.028  Sum_probs=19.1

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~   23 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFS   23 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEES
T ss_pred             CCCCCCCCCcCcCCCCCCcccC
Confidence            5889999999999998887764

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.81  E-value=8.8e-05  Score=47.43  Aligned_cols=22  Identities=5%  Similarity=-0.031  Sum_probs=19.1

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      +|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~   23 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFT   23 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCS
T ss_pred             CCCCCCCCCCCccCCccChhhC
Confidence            5889999999999998887764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.80  E-value=7.4e-05  Score=48.00  Aligned_cols=22  Identities=5%  Similarity=0.043  Sum_probs=18.9

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|+++++|+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFR   23 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEES
T ss_pred             CCCCCCCCCCCEECCcCCchhC
Confidence            5889999999999998887764

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.79  E-value=9.8e-05  Score=47.31  Aligned_cols=22  Identities=5%  Similarity=-0.031  Sum_probs=19.0

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFY   23 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEES
T ss_pred             CCCCCCCCCCCcCCCCCCCcCC
Confidence            5889999999999998887764

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=96.79  E-value=0.0001  Score=46.07  Aligned_cols=21  Identities=5%  Similarity=-0.070  Sum_probs=17.8

Q ss_pred             hhhhccCCcccccccccchhc
Q 047542          116 HQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       116 Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      |+++|++++||+|..|++.|.
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~   22 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFT   22 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEES
T ss_pred             CCccCCCCCCeECCCCCcccC
Confidence            788999999999998877653

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.79  E-value=7.4e-05  Score=47.89  Aligned_cols=22  Identities=5%  Similarity=-0.037  Sum_probs=19.0

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFH   23 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEES
T ss_pred             CCccccCCCcCeECCCCCCeeC
Confidence            5889999999999998887764

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.79  E-value=6.6e-05  Score=47.10  Aligned_cols=22  Identities=9%  Similarity=0.049  Sum_probs=18.5

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~   22 (42)
T 2en2_A            1 GSSGSSGGEKPYKCETCGARFV   22 (42)
T ss_dssp             CCCCCCCSSCSEECTTTCCEES
T ss_pred             CCCcccCCCCCEeCCCcChhhC
Confidence            3788999999999998887664

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.78  E-value=5.2e-05  Score=48.75  Aligned_cols=23  Identities=13%  Similarity=0.157  Sum_probs=19.8

Q ss_pred             hhhhhccCCcccccccccchhcc
Q 047542          115 GHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .|+++|++++||+|..|++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~   24 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGR   24 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESS
T ss_pred             CCCCCCCCCCCEEccccCcccCC
Confidence            58999999999999988887743

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.78  E-value=0.00018  Score=46.00  Aligned_cols=22  Identities=0%  Similarity=-0.147  Sum_probs=18.9

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~   23 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFI   23 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBS
T ss_pred             ccccccCCCCCEECCccCchhC
Confidence            5889999999999998887764

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.76  E-value=9.9e-05  Score=47.38  Aligned_cols=22  Identities=0%  Similarity=-0.026  Sum_probs=18.8

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~   23 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFT   23 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCS
T ss_pred             CCCCCCCCCCCEECCccCcccC
Confidence            5889999999999998887664

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.75  E-value=7.8e-05  Score=47.89  Aligned_cols=22  Identities=5%  Similarity=-0.043  Sum_probs=19.1

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~   23 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFT   23 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEES
T ss_pred             CcccccCCCCCEECcccCCccC
Confidence            5889999999999998887764

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.73  E-value=6.2e-05  Score=48.28  Aligned_cols=23  Identities=9%  Similarity=-0.047  Sum_probs=19.7

Q ss_pred             hhhhhccCCcccccccccchhcc
Q 047542          115 GHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .|+++|++++||+|..|++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~   24 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTD   24 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESS
T ss_pred             CCCCCCCCCCCcCCCCCCchhCC
Confidence            58899999999999988887743

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.71  E-value=9.8e-05  Score=46.86  Aligned_cols=22  Identities=9%  Similarity=0.081  Sum_probs=18.6

Q ss_pred             hhhhccCCcccccccccchhcc
Q 047542          116 HQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       116 Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      |+++|++++||+|..|++.|..
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~   22 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSS   22 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESS
T ss_pred             CCCCcCCCcCccCCCCCcccCC
Confidence            6789999999999988877643

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.70  E-value=8.5e-05  Score=47.59  Aligned_cols=22  Identities=5%  Similarity=-0.064  Sum_probs=19.2

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|+++++|+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~   23 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFT   23 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEES
T ss_pred             CCcccCCCCCCEeCCcCCCccC
Confidence            5889999999999998887764

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.70  E-value=7.6e-05  Score=47.85  Aligned_cols=22  Identities=5%  Similarity=0.016  Sum_probs=19.3

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|+++++|+|..|++.|.
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~   23 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFS   23 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEES
T ss_pred             CCCCccCCCcCeECCCCCcccC
Confidence            5889999999999998888764

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.68  E-value=0.0001  Score=47.22  Aligned_cols=22  Identities=9%  Similarity=-0.058  Sum_probs=19.1

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~   23 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFF   23 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEES
T ss_pred             CcccccCCCCCEEccccChhhC
Confidence            5889999999999998887764

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.64  E-value=0.00011  Score=47.03  Aligned_cols=23  Identities=9%  Similarity=0.131  Sum_probs=19.8

Q ss_pred             hhhhhccCCcccccccccchhcc
Q 047542          115 GHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .|+++|++++||+|..|++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~   24 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSW   24 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESS
T ss_pred             ccccccCCCCCeeCcccChhhCC
Confidence            58899999999999988887743

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.64  E-value=8.4e-05  Score=47.52  Aligned_cols=22  Identities=5%  Similarity=-0.073  Sum_probs=19.2

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|++++||+|..|++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~   23 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFI   23 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEES
T ss_pred             CCCcCcCCCcCccCCCCCCCcC
Confidence            5889999999999998887764

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.62  E-value=0.0001  Score=47.38  Aligned_cols=23  Identities=9%  Similarity=0.055  Sum_probs=19.4

Q ss_pred             hhhhhccCCcccccccccchhcc
Q 047542          115 GHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .|+++|++++||+|..|++.|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~   24 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGD   24 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSS
T ss_pred             CCCcCCCCCCCcCCCCCCchhCC
Confidence            58899999999999988877643

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.61  E-value=0.00014  Score=46.18  Aligned_cols=22  Identities=0%  Similarity=-0.154  Sum_probs=18.3

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .|+++|+++++|.|..|++.|.
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~   23 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFR   23 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCS
T ss_pred             CCCCCCCCCcCeECCCCCcccC
Confidence            5788999999999998877653

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.60  E-value=9.6e-05  Score=47.36  Aligned_cols=23  Identities=0%  Similarity=-0.084  Sum_probs=19.8

Q ss_pred             hhhhhccCCcccccccccchhcc
Q 047542          115 GHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .|+++|++++||+|..|++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~   24 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSV   24 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESC
T ss_pred             CcccccCCCcCeECCCCCchhCC
Confidence            58899999999999998887743

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.53  E-value=0.00026  Score=45.13  Aligned_cols=22  Identities=0%  Similarity=-0.008  Sum_probs=17.6

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .+.++|+++++|+|..|++.|.
T Consensus         2 s~~~~h~~~k~~~C~~C~k~F~   23 (45)
T 2epu_A            2 SSGSSGTGQKPFECTHCGKSFR   23 (45)
T ss_dssp             CCCCCCCSCCSEEETTTTEEES
T ss_pred             CCCCCCCCCcCccCCCCCCccC
Confidence            3567899999999998877653

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.48  E-value=0.00021  Score=45.80  Aligned_cols=23  Identities=13%  Similarity=0.143  Sum_probs=19.7

Q ss_pred             hhhhhccCCcccccccccchhcc
Q 047542          115 GHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .|+++|++++||+|..|++.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~   24 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGR   24 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSS
T ss_pred             CCCcCCCCCCCeECCCCCcccCC
Confidence            58899999999999988887743

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.46  E-value=0.00013  Score=52.97  Aligned_cols=62  Identities=15%  Similarity=0.174  Sum_probs=45.6

Q ss_pred             chhhhhhhhhccCCcccccccccchhcc--ccCCCCCc---cCCCCCCCCCCCCcccccccCCCCCCccccCCcCCCC
Q 047542          110 SQALGGHQNAHKQERALAKRRKEMDMGA--LGHHHYPY---YPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       110 ssaL~~Hqr~HtgEKPfkCr~c~~~~~~--~~~~~~~~---~py~~~~~~~~p~~~G~~f~rs~~lgl~~hs~iHkp~  182 (270)
                      ...|..|+++|.++||+.|..|++.|..  +..|. .+   +||.|       .+||+.|.+   -.|..|..+|...
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~~~~~L~~H~-~~c~~~~~~C-------~~C~~~~~~---~~l~~H~~~c~~~   68 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLELSILKLKEHE-DYCGARTELC-------GNCGRNVLV---KDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEECHHHHHHHH-HHHHHCEEEC-------SSSCCEEET---TGGGTHHHHBTTB
T ss_pred             chHHHhhCcccCCCcccCCcccChHhhHHHHHHHH-hHcCCCceEc-------ccCCCcCcH---HHHHHHHHHccCC
Confidence            3568899999999999999999998842  33332 22   45554       379997765   5788899888654

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.45  E-value=0.00013  Score=46.85  Aligned_cols=23  Identities=4%  Similarity=-0.086  Sum_probs=19.5

Q ss_pred             hhhhhccCCcccccccccchhcc
Q 047542          115 GHQNAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~~  137 (270)
                      .|+++|+++++|+|..|++.|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~   24 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKR   24 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESS
T ss_pred             CCCCCCCCCCCeECcccCchhCC
Confidence            57899999999999988877643

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=96.45  E-value=0.0011  Score=51.49  Aligned_cols=32  Identities=16%  Similarity=0.348  Sum_probs=29.3

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCC
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      ++|  ++||.|.+|++.|.....|..|+++|++.
T Consensus        95 ~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           95 RYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            456  88999999999999999999999999875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.35  E-value=0.00021  Score=43.31  Aligned_cols=20  Identities=10%  Similarity=0.039  Sum_probs=15.9

Q ss_pred             hhhccCCcccccccccchhc
Q 047542          117 QNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       117 qr~HtgEKPfkCr~c~~~~~  136 (270)
                      +++|++++||+|..|++.|.
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~   20 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFS   20 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECS
T ss_pred             CCCCCCCCCcCCCCCCCccC
Confidence            35789999999998877653

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.34  E-value=0.00042  Score=44.22  Aligned_cols=21  Identities=5%  Similarity=-0.046  Sum_probs=17.6

Q ss_pred             hhhhccCCcccccccccchhc
Q 047542          116 HQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       116 Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      ++++|+++++|+|..|++.|.
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~   23 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFR   23 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEES
T ss_pred             CCCCCCCCCCeeCcccCcccC
Confidence            578899999999998887764

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.33  E-value=0.00059  Score=45.51  Aligned_cols=42  Identities=10%  Similarity=-0.051  Sum_probs=28.6

Q ss_pred             hhccCCcccccccccchhcc---ccCCCC-Cc---cCCCCCCCCCCCCcccccccC
Q 047542          118 NAHKQERALAKRRKEMDMGA---LGHHHY-PY---YPYSSSVAHQNPNFYGSLFNR  166 (270)
Q Consensus       118 r~HtgEKPfkCr~c~~~~~~---~~~~~~-~~---~py~~~~~~~~p~~~G~~f~r  166 (270)
                      ..|.+++||+|..|++.|..   |..|.. .|   .||.       |..||+.|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~-------C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK-------CQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCC-------SSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCcc-------CCCCCCCCCC
Confidence            35788999999999999854   333322 22   3454       4589998865

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.30  E-value=0.00051  Score=44.59  Aligned_cols=23  Identities=0%  Similarity=-0.188  Sum_probs=16.4

Q ss_pred             hhhhhhhhccCCcccccc--cccch
Q 047542          112 ALGGHQNAHKQERALAKR--RKEMD  134 (270)
Q Consensus       112 aL~~Hqr~HtgEKPfkCr--~c~~~  134 (270)
                      .+..|...|++++||+|.  .|++.
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~   29 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKT   29 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCE
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCc
Confidence            345566779999999996  45443

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.15  E-value=0.00087  Score=41.62  Aligned_cols=18  Identities=6%  Similarity=0.058  Sum_probs=14.6

Q ss_pred             hhccCCcccccccccchh
Q 047542          118 NAHKQERALAKRRKEMDM  135 (270)
Q Consensus       118 r~HtgEKPfkCr~c~~~~  135 (270)
                      ++|++++||+|..|++.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f   20 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSF   20 (41)
T ss_dssp             SSCCCCCCEECSSSCCEE
T ss_pred             CccCCCCCeECCCCCCCc
Confidence            578899999998777665

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=96.08  E-value=0.00079  Score=40.15  Aligned_cols=17  Identities=12%  Similarity=0.032  Sum_probs=13.5

Q ss_pred             hccCCcccccccccchh
Q 047542          119 AHKQERALAKRRKEMDM  135 (270)
Q Consensus       119 ~HtgEKPfkCr~c~~~~  135 (270)
                      +|++++||+|..|++.|
T Consensus         1 ~H~~~k~~~C~~C~k~f   17 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAF   17 (35)
T ss_dssp             CCSCCSCEECSSSCCEE
T ss_pred             CCCCCcCeeCCCCCccc
Confidence            47889999998777665

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.05  E-value=0.00052  Score=43.98  Aligned_cols=21  Identities=10%  Similarity=-0.160  Sum_probs=16.9

Q ss_pred             hhhhccCCcccccccccchhc
Q 047542          116 HQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       116 Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      ++++|+++++|+|..|++.|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~   23 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFL   23 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCS
T ss_pred             CCCCCCCCCCcCCCCCCCeeC
Confidence            467899999999998877653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.93  E-value=0.00055  Score=43.83  Aligned_cols=20  Identities=0%  Similarity=-0.096  Sum_probs=12.4

Q ss_pred             ccccccCCCCCCccccCCcCCC
Q 047542          160 YGSLFNRSSPLGVSMQPMIRKP  181 (270)
Q Consensus       160 ~G~~f~rs~~lgl~~hs~iHkp  181 (270)
                      ||++|.+.  ..|+.|.++|+.
T Consensus        17 C~k~F~~~--~~L~~H~r~Htg   36 (38)
T 2eln_A           17 CDYSTPDK--YKLQAHLKVHTA   36 (38)
T ss_dssp             CCCEESCH--HHHHHHHHHHSC
T ss_pred             CCCccCCH--HHHHHHHHhcCC
Confidence            44555555  567777777764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=95.78  E-value=0.00092  Score=39.63  Aligned_cols=18  Identities=0%  Similarity=-0.252  Sum_probs=13.6

Q ss_pred             hccCCcccccccccchhc
Q 047542          119 AHKQERALAKRRKEMDMG  136 (270)
Q Consensus       119 ~HtgEKPfkCr~c~~~~~  136 (270)
                      +|++++||.|..|++.|.
T Consensus         1 ~h~~~k~~~C~~C~k~f~   18 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFV   18 (35)
T ss_dssp             CCCCCCSEECSSSCCEES
T ss_pred             CCCCCCCeECCCCcchhC
Confidence            478889999987776653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.75  E-value=0.0016  Score=48.22  Aligned_cols=26  Identities=12%  Similarity=0.069  Sum_probs=17.2

Q ss_pred             cccccccCCCCCCccccC-CcCCCCCCCC
Q 047542          159 FYGSLFNRSSPLGVSMQP-MIRKPSYPWV  186 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs-~iHkp~~~~~  186 (270)
                      .||++|.++  ..|+.|. +||+...|.+
T Consensus        34 ~CgKaFsr~--s~L~~H~rriHTgEKP~~   60 (73)
T 1x3c_A           34 GCFAAFTIQ--QNLILHYQAVHKSDLPAF   60 (73)
T ss_dssp             TCCCBCSSH--HHHHHHHHHHSSSCCCCC
T ss_pred             CcChhHcCH--HHHHHHhhhhCCCCCCcc
Confidence            466667776  6777785 5787665544

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.75  E-value=0.0018  Score=39.50  Aligned_cols=20  Identities=0%  Similarity=-0.217  Sum_probs=16.4

Q ss_pred             hhhccCCcccccccccchhc
Q 047542          117 QNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       117 qr~HtgEKPfkCr~c~~~~~  136 (270)
                      +++|++++||+|..|++.|.
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~   20 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSI   20 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEE
T ss_pred             CCccCCCcCeECCCCCcccC
Confidence            35789999999998887764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=95.74  E-value=0.001  Score=43.45  Aligned_cols=17  Identities=6%  Similarity=0.003  Sum_probs=13.0

Q ss_pred             hccCCcccccccccchh
Q 047542          119 AHKQERALAKRRKEMDM  135 (270)
Q Consensus       119 ~HtgEKPfkCr~c~~~~  135 (270)
                      +|+++|||+|..|++.|
T Consensus         1 ~Ht~~kp~~C~~C~k~F   17 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRY   17 (48)
T ss_dssp             -CTTTSCEECTTTCCEE
T ss_pred             CCCCCcCEECCCcCccc
Confidence            58899999998776654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=95.69  E-value=0.00043  Score=44.01  Aligned_cols=30  Identities=3%  Similarity=-0.103  Sum_probs=20.9

Q ss_pred             ccCCcccccccccchhccccCCCCCccCCCC
Q 047542          120 HKQERALAKRRKEMDMGALGHHHYPYYPYSS  150 (270)
Q Consensus       120 HtgEKPfkCr~c~~~~~~~~~~~~~~~py~~  150 (270)
                      +.+||||+|.+|+++|........|. ||.|
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-py~C   32 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-AYYC   32 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-HHTS
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-CeEC
Confidence            57899999999999997544432222 5544

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.57  E-value=0.0032  Score=51.05  Aligned_cols=32  Identities=22%  Similarity=0.312  Sum_probs=28.8

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhh
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNA  119 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~  119 (270)
                      ....|+|+++|.|..|++.|.+...|..|++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            34578999999999999999999999999875

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.46  E-value=0.00099  Score=42.51  Aligned_cols=21  Identities=5%  Similarity=0.017  Sum_probs=17.4

Q ss_pred             hhhhccCCcccccccccchhc
Q 047542          116 HQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       116 Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      .+++|+++++|+|..|++.|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~   23 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFS   23 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCS
T ss_pred             CCCCCCCCCCeeCCCCCcccC
Confidence            467899999999998887764

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.45  E-value=0.0014  Score=41.28  Aligned_cols=19  Identities=5%  Similarity=0.018  Sum_probs=14.9

Q ss_pred             hhccCCcccccccccchhc
Q 047542          118 NAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       118 r~HtgEKPfkCr~c~~~~~  136 (270)
                      ++|+++++|+|..|++.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~   21 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFS   21 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBS
T ss_pred             cCcCCCCCEECCCCCCeeC
Confidence            4688899999988777653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.44  E-value=0.0019  Score=38.78  Aligned_cols=17  Identities=6%  Similarity=-0.152  Sum_probs=13.1

Q ss_pred             hccCCcccccccccchh
Q 047542          119 AHKQERALAKRRKEMDM  135 (270)
Q Consensus       119 ~HtgEKPfkCr~c~~~~  135 (270)
                      .|++++||+|..|++.|
T Consensus         3 ~h~~~k~~~C~~C~k~f   19 (36)
T 2elv_A            3 SGSSGLLYDCHICERKF   19 (36)
T ss_dssp             CSCCCCCEECSSSCCEE
T ss_pred             CCCCCCCeECCCCCCcc
Confidence            57888999998776654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=95.30  E-value=0.0022  Score=39.33  Aligned_cols=16  Identities=6%  Similarity=-0.076  Sum_probs=11.5

Q ss_pred             ccCCcccccccccchh
Q 047542          120 HKQERALAKRRKEMDM  135 (270)
Q Consensus       120 HtgEKPfkCr~c~~~~  135 (270)
                      |++++||.|..|++.|
T Consensus         1 h~~~k~~~C~~C~k~f   16 (39)
T 1njq_A            1 XWPPRSYTCSFCKREF   16 (39)
T ss_dssp             -CCSSSEECTTTCCEE
T ss_pred             CCCCCceECCCCCccc
Confidence            5678888888776655

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.22  E-value=0.00057  Score=51.33  Aligned_cols=57  Identities=7%  Similarity=0.005  Sum_probs=38.7

Q ss_pred             hhhhhhccCCcccccccccchhcc---ccCCCCCc---cCCCCCCCCCCCCcccccccCCCCCCccccCCcCCCCC
Q 047542          114 GGHQNAHKQERALAKRRKEMDMGA---LGHHHYPY---YPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPSY  183 (270)
Q Consensus       114 ~~Hqr~HtgEKPfkCr~c~~~~~~---~~~~~~~~---~py~~~~~~~~p~~~G~~f~rs~~lgl~~hs~iHkp~~  183 (270)
                      ..|.++|++++||+|..|++.|..   |..|...|   .||.|          .. +.+.  -.+..|.++|...+
T Consensus        14 ~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C----------~~-~~~~--~~~~~~~~~~~~~~   76 (88)
T 1x6f_A           14 ILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRA----------KR-QERR--KQLLSKQKYADGAF   76 (88)
T ss_dssp             CCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHC----------CC-CSCC--CCCCCCCCCCCCSS
T ss_pred             eccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCccc----------ch-hhhH--HHHHhhhccccccc
Confidence            445678999999999999999854   33333323   35554          22 4455  66888999997753

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.19  E-value=0.0023  Score=40.83  Aligned_cols=21  Identities=10%  Similarity=0.044  Sum_probs=16.9

Q ss_pred             hhhhhccCCcccccc--cccchh
Q 047542          115 GHQNAHKQERALAKR--RKEMDM  135 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr--~c~~~~  135 (270)
                      .|.++|++++||+|.  .|++.|
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f   24 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRF   24 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEE
T ss_pred             CCCCCcCCCCCeECCCCCCCCcc
Confidence            467889999999998  676655

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=94.71  E-value=0.0047  Score=39.78  Aligned_cols=19  Identities=5%  Similarity=-0.064  Sum_probs=15.4

Q ss_pred             hccCCcccccccccchhcc
Q 047542          119 AHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       119 ~HtgEKPfkCr~c~~~~~~  137 (270)
                      .|.++++|.|..|++.|..
T Consensus         6 ~~~~~k~~~C~~C~k~f~~   24 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRD   24 (48)
T ss_dssp             CCCCCCSEEETTTTEEESS
T ss_pred             CCCCCcCeeCCCCCcccCC
Confidence            4778999999999888743

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=94.58  E-value=0.0023  Score=38.82  Aligned_cols=16  Identities=0%  Similarity=-0.020  Sum_probs=11.2

Q ss_pred             ccCCcccccc--cccchh
Q 047542          120 HKQERALAKR--RKEMDM  135 (270)
Q Consensus       120 HtgEKPfkCr--~c~~~~  135 (270)
                      |++++||+|.  .|++.|
T Consensus         1 H~~~k~~~C~~~~C~k~f   18 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRF   18 (38)
T ss_dssp             CTTCCCEECCCTTTCCEE
T ss_pred             CCCCcceECCCCCCCccc
Confidence            5778888887  365544

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=94.39  E-value=0.0026  Score=40.27  Aligned_cols=19  Identities=5%  Similarity=0.032  Sum_probs=15.7

Q ss_pred             hhccCCcccccccccchhc
Q 047542          118 NAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       118 r~HtgEKPfkCr~c~~~~~  136 (270)
                      ..|++++||+|..|++.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~   21 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFK   21 (45)
T ss_dssp             CCCSSCCSSEETTTTEECS
T ss_pred             CCcCCCCCCcCCCCCcccC
Confidence            3688999999998888764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.19  E-value=0.011  Score=35.44  Aligned_cols=20  Identities=10%  Similarity=0.011  Sum_probs=16.4

Q ss_pred             hhccCCcccccccccchhcc
Q 047542          118 NAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       118 r~HtgEKPfkCr~c~~~~~~  137 (270)
                      ++|++++||+|..|++.|..
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~   21 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMK   21 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECS
T ss_pred             CCCCCCCCeECCCCChhhcc
Confidence            57899999999988877643

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=93.92  E-value=0.0053  Score=43.99  Aligned_cols=18  Identities=6%  Similarity=-0.106  Sum_probs=12.9

Q ss_pred             hhccCCcccccccccchh
Q 047542          118 NAHKQERALAKRRKEMDM  135 (270)
Q Consensus       118 r~HtgEKPfkCr~c~~~~  135 (270)
                      ..|+++|||+|.+|++.|
T Consensus         6 ~~~~~ekpy~C~~CgK~F   23 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVF   23 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCC
T ss_pred             CCCCCccCcCCCCCCCcc
Confidence            347788888888766654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=93.91  E-value=0.003  Score=38.46  Aligned_cols=16  Identities=0%  Similarity=-0.255  Sum_probs=11.3

Q ss_pred             ccCCccccccc--ccchh
Q 047542          120 HKQERALAKRR--KEMDM  135 (270)
Q Consensus       120 HtgEKPfkCr~--c~~~~  135 (270)
                      |++++||.|..  |++.|
T Consensus         3 ~~~~k~~~C~~~~C~k~f   20 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVY   20 (37)
T ss_dssp             SSSCCCEECCSTTCCCEE
T ss_pred             CCCCCCCCCCCCCCCCcc
Confidence            67888888873  55544

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.85  E-value=0.0047  Score=36.91  Aligned_cols=17  Identities=0%  Similarity=-0.097  Sum_probs=12.8

Q ss_pred             hccCCcccccccccchh
Q 047542          119 AHKQERALAKRRKEMDM  135 (270)
Q Consensus       119 ~HtgEKPfkCr~c~~~~  135 (270)
                      .|.+++||+|..|++.|
T Consensus         3 ~~~~~k~~~C~~C~k~f   19 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVF   19 (36)
T ss_dssp             TTSCCCCEECTTTCCEE
T ss_pred             CCCCCCCEECCCCCcee
Confidence            46778888888777665

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.52  E-value=0.017  Score=34.30  Aligned_cols=19  Identities=5%  Similarity=-0.029  Sum_probs=15.2

Q ss_pred             hhccCCcccccccccchhc
Q 047542          118 NAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       118 r~HtgEKPfkCr~c~~~~~  136 (270)
                      +.|++++||+|..|++.|.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~   20 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATR   20 (36)
T ss_dssp             CSSCCCCSEECSSSSCEES
T ss_pred             CCCCCCCCccCCCCCchhC
Confidence            4688999999998887664

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.12  E-value=0.02  Score=33.82  Aligned_cols=19  Identities=0%  Similarity=-0.059  Sum_probs=14.7

Q ss_pred             hhccCCcccccccccchhc
Q 047542          118 NAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       118 r~HtgEKPfkCr~c~~~~~  136 (270)
                      ..|++++||+|..|++.|.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~   20 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASA   20 (36)
T ss_dssp             CCSCCCCSEECSSSSCEES
T ss_pred             CCCCCCCCCCCCCCCcccC
Confidence            3588899999988776653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=92.27  E-value=0.034  Score=32.46  Aligned_cols=23  Identities=17%  Similarity=-0.109  Sum_probs=15.1

Q ss_pred             cccccccCCCCCCccccCCcCCCCC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIRKPSY  183 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iHkp~~  183 (270)
                      .||+.|.+.  ..|+.|.++|+...
T Consensus         7 ~C~k~f~~~--~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            7 ACPKRFMRS--DALSKHIKTAFIVV   29 (32)
T ss_dssp             SSCTTHHHH--HTTSSSTTSSSSSS
T ss_pred             CCCcccCCH--HHHHHHHHHHccCC
Confidence            566666666  66777777776553

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.85  E-value=0.05  Score=31.98  Aligned_cols=17  Identities=0%  Similarity=-0.160  Sum_probs=13.1

Q ss_pred             hccCCcccccccccchh
Q 047542          119 AHKQERALAKRRKEMDM  135 (270)
Q Consensus       119 ~HtgEKPfkCr~c~~~~  135 (270)
                      .|+++++|.|..|++.|
T Consensus         3 ~h~~~~~~~C~~C~k~f   19 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKF   19 (36)
T ss_dssp             CCCCCSSCBCTTTCCBC
T ss_pred             CCCCCCCeecCcCCCCc
Confidence            47788899998777665

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=89.32  E-value=0.061  Score=29.29  Aligned_cols=19  Identities=16%  Similarity=0.041  Sum_probs=11.0

Q ss_pred             cccccccCCCCCCccccCCcC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIR  179 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iH  179 (270)
                      .||+.|.+.  ..|+.|.++|
T Consensus         7 ~C~k~f~~~--~~l~~H~~~H   25 (26)
T 2lvu_A            7 RCGKRFVQS--SQLANHIRHH   25 (26)
Confidence            455555555  5566666665

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=88.94  E-value=0.07  Score=29.70  Aligned_cols=21  Identities=10%  Similarity=0.148  Sum_probs=13.8

Q ss_pred             cccccccCCCCCCccccCCcCCC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIRKP  181 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iHkp  181 (270)
                      .||+.|.+.  ..|+.|.++|..
T Consensus         7 ~C~k~f~~~--~~l~~H~~~H~~   27 (29)
T 2lvt_A            7 MCGKAFTQA--SSLIAHVRQHTG   27 (29)
Confidence            566666666  667777777753

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=88.16  E-value=0.088  Score=29.24  Aligned_cols=20  Identities=10%  Similarity=0.039  Sum_probs=11.7

Q ss_pred             cccccccCCCCCCccccCCcCC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIRK  180 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iHk  180 (270)
                      .||+.|.+.  ..|+.|.++|+
T Consensus         8 ~C~k~f~~~--~~l~~H~~~h~   27 (30)
T 2lvr_A            8 HCQRQFADP--GALQRHVRIHT   27 (30)
Confidence            455555555  55666666664

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=87.37  E-value=0.052  Score=31.90  Aligned_cols=25  Identities=16%  Similarity=-0.083  Sum_probs=18.7

Q ss_pred             CcccccccCCCCCCccccCCcCCCCCC
Q 047542          158 NFYGSLFNRSSPLGVSMQPMIRKPSYP  184 (270)
Q Consensus       158 ~~~G~~f~rs~~lgl~~hs~iHkp~~~  184 (270)
                      ..||+.|.+.  ..|+.|.++|+...+
T Consensus         6 ~~C~k~F~~~--~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            6 PECPKRFMRS--DHLSKHITLHELLGE   30 (33)
T ss_dssp             SSSCCCCSSH--HHHHHHHHHHTTTCC
T ss_pred             CCCCchhCCH--HHHHHHHHHhCCCCC
Confidence            3677778777  778888888876644

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=86.43  E-value=0.29  Score=33.23  Aligned_cols=23  Identities=35%  Similarity=0.624  Sum_probs=21.3

Q ss_pred             CcccCCCCCcccCCchhhhhhhh
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQN  118 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr  118 (270)
                      -+|.|+.|++.|.....|+.|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            46889999999999999999997

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=85.74  E-value=0.42  Score=33.50  Aligned_cols=38  Identities=21%  Similarity=0.290  Sum_probs=29.6

Q ss_pred             ccCCC--CCcccCCchhhhhhh-hhccCCc------ccccc--cccchh
Q 047542           98 FLCNF--CNKIFSTSQALGGHQ-NAHKQER------ALAKR--RKEMDM  135 (270)
Q Consensus        98 f~C~~--CgKsF~sssaL~~Hq-r~HtgEK------PfkCr--~c~~~~  135 (270)
                      +.|..  |++.|.+...|..|+ +.|.+.+      +|.|.  .|++.+
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~   50 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLG   50 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEE
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCC
Confidence            34655  999999999999997 5798766      79997  566543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=85.63  E-value=0.21  Score=27.65  Aligned_cols=22  Identities=14%  Similarity=0.086  Sum_probs=15.6

Q ss_pred             CcccccccCCCCCCcccc-CCcCCC
Q 047542          158 NFYGSLFNRSSPLGVSMQ-PMIRKP  181 (270)
Q Consensus       158 ~~~G~~f~rs~~lgl~~h-s~iHkp  181 (270)
                      ..||+.|.+.  ..|+.| ..+|+.
T Consensus         6 ~~C~k~f~~~--~~l~~H~~~~H~~   28 (30)
T 1paa_A            6 GLCNRAFTRR--DLLIRHAQKIHSG   28 (30)
T ss_dssp             TTTCCBCSSS--HHHHHHHTTTSCC
T ss_pred             cccCcccCCh--HHHHHHHHHHccC
Confidence            3677777776  777888 778764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=83.22  E-value=0.2  Score=28.44  Aligned_cols=21  Identities=10%  Similarity=-0.010  Sum_probs=15.6

Q ss_pred             cccccccCCCCCCccccCCcCCC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIRKP  181 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iHkp  181 (270)
                      .||++|.+.  ..|+.|.++|+.
T Consensus        10 ~C~k~f~~~--~~L~~H~~~H~~   30 (32)
T 1zfd_A           10 GCDKAFVRN--HDLIRHKKSHQE   30 (32)
T ss_dssp             TCCCCBSSS--HHHHHHHGGGTC
T ss_pred             CCCCccCCH--HHHHHHHHHccC
Confidence            577777776  778888888864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	270
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	2e-12

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 58.2 bits (141), Expect = 2e-12
 Identities = 14/34 (41%), Positives = 24/34 (70%)

Query: 95  QKGFLCNFCNKIFSTSQALGGHQNAHKQERALAK 128
            + + C+FC + F ++QALGGH N H+++RA  +
Sbjct: 3   PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	270
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.22
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.05
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.03
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.95
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.9
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.8
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.78
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.77
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.76
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.64
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.63
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.61
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.56
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.54
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.43
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.42
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.38
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.28
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.08
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.08
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.08
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.06
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.02
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.9
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.79
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.74
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.58
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	97.57
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.57
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.5
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.42
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.39
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.34
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.12
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.08
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.91
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.87
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	96.82
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.71
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.53
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.34
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.24
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.15
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.02
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	95.99
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	95.73
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.45
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.24
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.24
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.15
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	95.06
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	94.77
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.67
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.52
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.36
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.15
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.06
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.96
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.8
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.52
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	92.45
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.79
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	91.34
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	90.84
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	89.77
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	89.67
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	87.74
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	87.33
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.12
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	84.18
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	84.15
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	83.43
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	82.86
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	80.53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=8.1e-13  Score=90.26  Aligned_cols=41  Identities=20%  Similarity=0.280  Sum_probs=37.8

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCCcccccccccchhc
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      +|||.|+ |+++|.....|..|+++|+++|||+|..|+++|.
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~   41 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFK   41 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEES
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEec
Confidence            6899995 9999999999999999999999999998887764

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=2.8e-11  Score=75.53  Aligned_cols=33  Identities=36%  Similarity=0.508  Sum_probs=32.0

Q ss_pred             ccCCCCcccCCCCCcccCCchhhhhhhhhccCC
Q 047542           91 KQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        91 ~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      +||++|||+|.+|+++|.+.+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            699999999999999999999999999999987

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=4e-11  Score=77.51  Aligned_cols=36  Identities=33%  Similarity=0.589  Sum_probs=33.7

Q ss_pred             CCCcccCCCCCcccCCchhhhhhhh-hccCCcccccc
Q 047542           94 KQKGFLCNFCNKIFSTSQALGGHQN-AHKQERALAKR  129 (270)
Q Consensus        94 geKpf~C~~CgKsF~sssaL~~Hqr-~HtgEKPfkCr  129 (270)
                      .+|||.|.+|++.|....+|..|++ +|++||||+|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4799999999999999999999965 89999999996

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.5e-10  Score=74.23  Aligned_cols=36  Identities=31%  Similarity=0.559  Sum_probs=33.8

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccCC
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      ..++|+++|||.|.+|+|+|...+.|..|+++|+||
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            346899999999999999999999999999999997

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=2.6e-10  Score=72.33  Aligned_cols=34  Identities=24%  Similarity=0.493  Sum_probs=32.4

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhhhccCC
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      |+|||+|||+|.+|+++|.....|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5899999999999999999999999999999876

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=8.6e-10  Score=69.52  Aligned_cols=33  Identities=21%  Similarity=0.507  Sum_probs=31.1

Q ss_pred             cCCCCcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           92 QPKQKGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        92 HTgeKpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      |||+|||+|.+|++.|.+...|..|+++|+.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            789999999999999999999999999999753

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=1.6e-09  Score=68.95  Aligned_cols=35  Identities=29%  Similarity=0.446  Sum_probs=32.4

Q ss_pred             cccccCCCCcccCCCCCcccCCchhhhhhhhhccC
Q 047542           88 IRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAHKQ  122 (270)
Q Consensus        88 ~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~Htg  122 (270)
                      ..|+||++|||+|.+|+++|.+.+.|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            35789999999999999999999999999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.77  E-value=1.1e-09  Score=66.15  Aligned_cols=29  Identities=28%  Similarity=0.781  Sum_probs=28.1

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      |||.|.+|+++|.+...|..|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999997

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.7e-09  Score=65.45  Aligned_cols=29  Identities=34%  Similarity=0.628  Sum_probs=28.0

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      |||.|.+|+++|.+++.|..|+++|++||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            69999999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=4.5e-09  Score=66.45  Aligned_cols=33  Identities=21%  Similarity=0.475  Sum_probs=29.5

Q ss_pred             cccCCCCcccCCCCCcccCCchhhhhhhh-hccC
Q 047542           90 KKQPKQKGFLCNFCNKIFSTSQALGGHQN-AHKQ  122 (270)
Q Consensus        90 ~~HTgeKpf~C~~CgKsF~sssaL~~Hqr-~Htg  122 (270)
                      ++|||+|||.|.+|++.|.+..+|..|++ .|+.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            58999999999999999999999999975 4554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.63  E-value=3.5e-09  Score=63.51  Aligned_cols=28  Identities=39%  Similarity=0.654  Sum_probs=26.9

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccC
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQ  122 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~Htg  122 (270)
                      ||||+|.+|+|+|.++..|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=4.4e-09  Score=66.57  Aligned_cols=32  Identities=28%  Similarity=0.482  Sum_probs=30.6

Q ss_pred             ccCCC--CCcccCCchhhhhhhhhccCCcccccc
Q 047542           98 FLCNF--CNKIFSTSQALGGHQNAHKQERALAKR  129 (270)
Q Consensus        98 f~C~~--CgKsF~sssaL~~Hqr~HtgEKPfkCr  129 (270)
                      |.|.+  |+++|.....|.+|+++|++||||+|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            78987  999999999999999999999999996

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=6.3e-09  Score=61.26  Aligned_cols=26  Identities=38%  Similarity=0.622  Sum_probs=25.0

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhcc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      |||+|.+|||+|...+.|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999995

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.54  E-value=8.6e-09  Score=68.85  Aligned_cols=34  Identities=32%  Similarity=0.633  Sum_probs=32.5

Q ss_pred             ccCCCCcccCCC--CCcccCCchhhhhhhhhccCCc
Q 047542           91 KQPKQKGFLCNF--CNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        91 ~HTgeKpf~C~~--CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      .|++++||.|.+  |++.|...++|..|+++|+|||
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            589999999988  9999999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=4e-08  Score=59.64  Aligned_cols=28  Identities=36%  Similarity=0.647  Sum_probs=27.0

Q ss_pred             CcccCCC--CCcccCCchhhhhhhhhccCC
Q 047542           96 KGFLCNF--CNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        96 Kpf~C~~--CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      |||.|.+  |+++|.+...|..|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6999999  999999999999999999997

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=4.5e-08  Score=59.83  Aligned_cols=29  Identities=34%  Similarity=0.832  Sum_probs=27.2

Q ss_pred             CcccCCC--CCcccCCchhhhhhhhhccCCc
Q 047542           96 KGFLCNF--CNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        96 Kpf~C~~--CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      |||.|++  |++.|....+|..|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6899975  9999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=3.9e-08  Score=59.69  Aligned_cols=28  Identities=39%  Similarity=0.689  Sum_probs=26.8

Q ss_pred             CcccCCC--CCcccCCchhhhhhhhhccCC
Q 047542           96 KGFLCNF--CNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        96 Kpf~C~~--CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      |||.|.+  |+|+|.....|..|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999988  999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=3.4e-08  Score=62.95  Aligned_cols=36  Identities=11%  Similarity=0.049  Sum_probs=28.8

Q ss_pred             hhhhhccCCcccccccccchhccccCCCCCccCCCCCCCCCCCCcccccccCCCCCCccccCCcCCC
Q 047542          115 GHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKP  181 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~~~~~~~~~~~py~~~~~~~~p~~~G~~f~rs~~lgl~~hs~iHkp  181 (270)
                      +|+++|++||||+|.+|++                             +|.+.  ..|..|.+||++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK-----------------------------~F~~~--s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGK-----------------------------SFSHS--SDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCC-----------------------------BCSCH--HHHHHHHTTTCC
T ss_pred             ccCcccCCCCCEecCCCCc-----------------------------eeeCH--HHHHHhCccCCC
Confidence            6999999999999986554                             46665  667888888875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=1.6e-07  Score=59.45  Aligned_cols=22  Identities=5%  Similarity=0.077  Sum_probs=18.7

Q ss_pred             hhhhhccCCcccccccccchhc
Q 047542          115 GHQNAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       115 ~Hqr~HtgEKPfkCr~c~~~~~  136 (270)
                      +|.|+|++||||+|.+|+++|.
T Consensus         1 gh~R~HTgeKPy~C~~C~k~F~   22 (37)
T d1p7aa_           1 GSTRGSTGIKPFQCPDCDRSFS   22 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBS
T ss_pred             CCCCccCCccCeEeCCCCCEec
Confidence            4899999999999998776653

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=3.8e-07  Score=54.76  Aligned_cols=27  Identities=30%  Similarity=0.630  Sum_probs=25.7

Q ss_pred             CcccCCC--CCcccCCchhhhhhhhhccC
Q 047542           96 KGFLCNF--CNKIFSTSQALGGHQNAHKQ  122 (270)
Q Consensus        96 Kpf~C~~--CgKsF~sssaL~~Hqr~Htg  122 (270)
                      |||.|.+  |+|+|.+...|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999988  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.08  E-value=9.6e-07  Score=54.12  Aligned_cols=29  Identities=24%  Similarity=0.697  Sum_probs=27.0

Q ss_pred             CCcccCCC--CCcccCCchhhhhhhhhccCC
Q 047542           95 QKGFLCNF--CNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        95 eKpf~C~~--CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      +|||.|.+  |+|+|....+|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999998  999999999999999999864

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=4.2e-07  Score=61.05  Aligned_cols=34  Identities=24%  Similarity=0.422  Sum_probs=31.2

Q ss_pred             ccccccCCCCcccCCCCCcccCCchhhhhhhhhc
Q 047542           87 SIRKKQPKQKGFLCNFCNKIFSTSQALGGHQNAH  120 (270)
Q Consensus        87 ~~~~~HTgeKpf~C~~CgKsF~sssaL~~Hqr~H  120 (270)
                      ...++|++++||.|.+|+++|.....|..|+++|
T Consensus        20 ~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1          20 RHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             HHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             HHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            3456899999999999999999999999999987

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=9.5e-07  Score=52.58  Aligned_cols=26  Identities=38%  Similarity=0.802  Sum_probs=24.8

Q ss_pred             CcccCCC--CCcccCCchhhhhhhhhcc
Q 047542           96 KGFLCNF--CNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        96 Kpf~C~~--CgKsF~sssaL~~Hqr~Ht  121 (270)
                      |||.|++  |+|+|....+|.+|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999998  9999999999999999996

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=3.7e-07  Score=56.38  Aligned_cols=17  Identities=12%  Similarity=0.067  Sum_probs=13.9

Q ss_pred             hccCCcccccccccchh
Q 047542          119 AHKQERALAKRRKEMDM  135 (270)
Q Consensus       119 ~HtgEKPfkCr~c~~~~  135 (270)
                      +|++||||+|.+|+++|
T Consensus         1 IHTgekpy~C~~Cgk~F   17 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAF   17 (33)
T ss_dssp             TTTTCCCEECSSSCCEE
T ss_pred             CcCCCCCeeCCCCCCEe
Confidence            69999999999766554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.79  E-value=4e-06  Score=52.77  Aligned_cols=31  Identities=45%  Similarity=1.063  Sum_probs=27.8

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCCcc
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQERA  125 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgEKP  125 (270)
                      .+.|+|.+|++.|.+.++|.+|++.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            4679999999999999999999999987653

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1e-06  Score=55.20  Aligned_cols=19  Identities=16%  Similarity=0.207  Sum_probs=15.9

Q ss_pred             hhccCCcccccccccchhc
Q 047542          118 NAHKQERALAKRRKEMDMG  136 (270)
Q Consensus       118 r~HtgEKPfkCr~c~~~~~  136 (270)
                      |+|+|||||+|.+|+++|.
T Consensus         1 R~HTgekPy~C~~C~k~F~   19 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFR   19 (36)
T ss_dssp             TTCCCCCCEECSSSSCEES
T ss_pred             CCCCCCCCEECCCCCCCcC
Confidence            6899999999997776653

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.58  E-value=1.1e-05  Score=47.02  Aligned_cols=27  Identities=30%  Similarity=0.653  Sum_probs=25.4

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhcc
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      +|||.|++||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999985

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.57  E-value=3e-06  Score=52.83  Aligned_cols=16  Identities=13%  Similarity=0.023  Sum_probs=13.2

Q ss_pred             ccCCcccccccccchh
Q 047542          120 HKQERALAKRRKEMDM  135 (270)
Q Consensus       120 HtgEKPfkCr~c~~~~  135 (270)
                      |+|||||+|..|+++|
T Consensus         2 ~TGekPy~C~~C~k~F   17 (35)
T d1srka_           2 SSGKRPFVCRICLSAF   17 (35)
T ss_dssp             CSCCSCEECSSSCCEE
T ss_pred             CCCCccccCCCCCCcc
Confidence            7899999999776654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=1.2e-05  Score=48.77  Aligned_cols=32  Identities=31%  Similarity=0.612  Sum_probs=29.4

Q ss_pred             CcccCCCCCcccCCchhhhhhhhhccCCcccc
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNAHKQERALA  127 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~HtgEKPfk  127 (270)
                      |-..|+.|||.|.....|.+|.-.|++||||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45679999999999999999999999999984

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=2.1e-05  Score=44.61  Aligned_cols=26  Identities=31%  Similarity=0.577  Sum_probs=24.4

Q ss_pred             cccCCCCCcccCCchhhhhhhhhccC
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHKQ  122 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~Htg  122 (270)
                      |++|+.|++.|..+..|.-|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.42  E-value=7e-06  Score=54.30  Aligned_cols=42  Identities=5%  Similarity=-0.008  Sum_probs=32.3

Q ss_pred             hhhhhhhhhccCCcccccccccchhccccCCCCCccCCCCCCCCCCCCcccccccCCCCCCccccCCcCCCC
Q 047542          111 QALGGHQNAHKQERALAKRRKEMDMGALGHHHYPYYPYSSSVAHQNPNFYGSLFNRSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       111 saL~~Hqr~HtgEKPfkCr~c~~~~~~~~~~~~~~~py~~~~~~~~p~~~G~~f~rs~~lgl~~hs~iHkp~  182 (270)
                      ..|..|+. |++||||+|...                           -||++|.++  ..|+.|.++|++.
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~---------------------------~C~k~F~~~--~~L~~H~r~Htge   46 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFP---------------------------GCTKTFKRR--YNIRSHIQTHLED   46 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCT---------------------------TCCCEECSS--SSHHHHHHHHTTT
T ss_pred             chhcchhh-ccCCCCeECCcC---------------------------CCCccccCc--hHHHhhcccccCC
Confidence            45677774 999999999740                           366778887  7888899998764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=3.2e-05  Score=44.68  Aligned_cols=27  Identities=37%  Similarity=0.548  Sum_probs=25.1

Q ss_pred             cccCCCCCcccCCchhhhhhhhhccCC
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      .+.|.+|||+|..++.|.+|+-+|++|
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            467999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=1.8e-05  Score=49.40  Aligned_cols=20  Identities=10%  Similarity=0.044  Sum_probs=17.1

Q ss_pred             hhccCCcccccccccchhcc
Q 047542          118 NAHKQERALAKRRKEMDMGA  137 (270)
Q Consensus       118 r~HtgEKPfkCr~c~~~~~~  137 (270)
                      |+|+|||||+|..|+++|..
T Consensus         1 R~HTgekP~~C~~C~k~F~~   20 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQ   20 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESC
T ss_pred             CccCCCCCEeCCCCcccccc
Confidence            58999999999988887754

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=9e-05  Score=42.98  Aligned_cols=29  Identities=24%  Similarity=0.478  Sum_probs=26.8

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCC
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      +|||+|..|...-..++.|..|.|.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999974

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.08  E-value=0.00013  Score=41.04  Aligned_cols=24  Identities=38%  Similarity=0.840  Sum_probs=22.9

Q ss_pred             ccCCCCCcccCCchhhhhhhhhcc
Q 047542           98 FLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        98 f~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      |+|..|.++|..+++|.+|||+|+
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999996

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.91  E-value=1.5e-05  Score=47.19  Aligned_cols=20  Identities=15%  Similarity=0.051  Sum_probs=12.1

Q ss_pred             cccccccCCCCCCccccCCcCC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIRK  180 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iHk  180 (270)
                      .||++|.++  ..|+.|.+||+
T Consensus         8 ~C~k~F~~~--~~L~~H~r~HT   27 (28)
T d1a1ia2           8 ICMRNFSRS--DHLTTHIRTHT   27 (28)
T ss_dssp             TTCCEESCH--HHHHHHHHHHH
T ss_pred             CCcCEeccc--ccccccCCCcc
Confidence            344455665  56667777775

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00024  Score=41.21  Aligned_cols=27  Identities=22%  Similarity=0.472  Sum_probs=25.6

Q ss_pred             ccCCCCCcccCCchhhhhhhhhccCCc
Q 047542           98 FLCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        98 f~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      |.|.+|+..-...+-|..|.|.|+++|
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999985

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=1.7e-05  Score=46.21  Aligned_cols=21  Identities=19%  Similarity=0.235  Sum_probs=15.2

Q ss_pred             CcccccccCCCCCCccccCCcCC
Q 047542          158 NFYGSLFNRSSPLGVSMQPMIRK  180 (270)
Q Consensus       158 ~~~G~~f~rs~~lgl~~hs~iHk  180 (270)
                      ++|||+|+++  ..|..|++||+
T Consensus         6 ~eCgK~F~~~--s~L~~HqriHT   26 (26)
T d1x6ea2           6 LECGKAFSQN--SGLINHQRIHT   26 (26)
T ss_dssp             SSSCCEESSH--HHHHHHHHHHH
T ss_pred             CCCcCeeccC--cccccCccCCC
Confidence            3666777777  77788888874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.71  E-value=0.00034  Score=39.75  Aligned_cols=26  Identities=31%  Similarity=0.508  Sum_probs=24.8

Q ss_pred             cCCCCCcccCCchhhhhhhhhccCCc
Q 047542           99 LCNFCNKIFSTSQALGGHQNAHKQER  124 (270)
Q Consensus        99 ~C~~CgKsF~sssaL~~Hqr~HtgEK  124 (270)
                      +|+.|.+.|.++..|..|-|.|+|||
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999986

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.0004  Score=41.05  Aligned_cols=29  Identities=21%  Similarity=0.489  Sum_probs=26.7

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCC
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      +|||.|+.|...|..+..+.-|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999764

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.00075  Score=38.70  Aligned_cols=27  Identities=26%  Similarity=0.490  Sum_probs=25.1

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhcc
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      .|||+|..|..+-...+.|..|+|+|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            379999999999999999999999995

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.00095  Score=39.56  Aligned_cols=28  Identities=36%  Similarity=0.768  Sum_probs=25.0

Q ss_pred             CcccCCC--CCcccCCchhhhhhh-hhccCC
Q 047542           96 KGFLCNF--CNKIFSTSQALGGHQ-NAHKQE  123 (270)
Q Consensus        96 Kpf~C~~--CgKsF~sssaL~~Hq-r~HtgE  123 (270)
                      |||.|.+  |.|+|...+.-..|| |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6899998  999999999999998 888654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.15  E-value=0.00025  Score=41.97  Aligned_cols=23  Identities=9%  Similarity=0.005  Sum_probs=19.1

Q ss_pred             CcccccccCCCCCCccccCCcCCCC
Q 047542          158 NFYGSLFNRSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       158 ~~~G~~f~rs~~lgl~~hs~iHkp~  182 (270)
                      .+||++|.+.  ..|+.|.+||++.
T Consensus         6 ~~C~k~F~~~--~~L~~H~r~HTgE   28 (29)
T d2adra1           6 EVCTRAFARQ--EHLKRHYRSHTNE   28 (29)
T ss_dssp             TTTCCCBSCH--HHHHHHHHTTTSS
T ss_pred             CCCCCCCCCc--hHcccccCcccCC
Confidence            4788888888  8899999999864

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.0012  Score=41.86  Aligned_cols=26  Identities=27%  Similarity=0.486  Sum_probs=23.6

Q ss_pred             CCCCcccCCCCCcccCCchhhhhhhh
Q 047542           93 PKQKGFLCNFCNKIFSTSQALGGHQN  118 (270)
Q Consensus        93 TgeKpf~C~~CgKsF~sssaL~~Hqr  118 (270)
                      ||-|||+|..|+|.|-+...+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            57899999999999999999999864

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.99  E-value=0.00056  Score=41.37  Aligned_cols=21  Identities=10%  Similarity=-0.010  Sum_probs=18.5

Q ss_pred             cccccccCCCCCCccccCCcCCC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIRKP  181 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iHkp  181 (270)
                      -||++|.|+  ..|++|.++|+.
T Consensus        10 gC~k~F~r~--~~L~~H~r~Ht~   30 (32)
T d1zfda_          10 GCDKAFVRN--HDLIRHKKSHQE   30 (32)
T ss_dssp             TCCCCBSSS--HHHHHHHGGGTC
T ss_pred             CCCCeeCCH--HHHHHHhhhccC
Confidence            588999998  899999999975

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.73  E-value=0.00061  Score=40.25  Aligned_cols=23  Identities=17%  Similarity=-0.029  Sum_probs=19.7

Q ss_pred             CcccccccCCCCCCccccCCcCCCC
Q 047542          158 NFYGSLFNRSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       158 ~~~G~~f~rs~~lgl~~hs~iHkp~  182 (270)
                      .+||++|.++  ..|..|.+||++.
T Consensus         6 ~~C~k~F~~~--s~L~~H~r~Htge   28 (29)
T d1sp1a_           6 PECPKRFMRS--DHLSKHIKTHQNK   28 (29)
T ss_dssp             TTTTCCCSCS--HHHHHHHHGGGCC
T ss_pred             CcCCCeecch--HHhhhhcCccCCc
Confidence            4788889998  8899999999864

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.45  E-value=0.0028  Score=36.78  Aligned_cols=28  Identities=36%  Similarity=0.578  Sum_probs=25.6

Q ss_pred             CcccCCC--CCcccCCchhhhhhhhhccCC
Q 047542           96 KGFLCNF--CNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        96 Kpf~C~~--CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      |||.|.+  |.|.|.+--.|.+|.-+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5889987  999999999999999999986

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0036  Score=36.61  Aligned_cols=27  Identities=22%  Similarity=0.609  Sum_probs=23.8

Q ss_pred             CcccCCC--CCcccCCchhhhhhhhhccC
Q 047542           96 KGFLCNF--CNKIFSTSQALGGHQNAHKQ  122 (270)
Q Consensus        96 Kpf~C~~--CgKsF~sssaL~~Hqr~Htg  122 (270)
                      |||.|.+  |.|.+...+.|+.|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899988  99999999999999986543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0066  Score=35.23  Aligned_cols=28  Identities=29%  Similarity=0.578  Sum_probs=23.9

Q ss_pred             CcccCCCCCcccCCchhhhhhhhh-ccCC
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNA-HKQE  123 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~-HtgE  123 (270)
                      +||.|.+|...-..+++|..|..+ |..|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            689999999999999999999775 5444

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.15  E-value=0.0033  Score=37.13  Aligned_cols=26  Identities=27%  Similarity=0.635  Sum_probs=22.5

Q ss_pred             cccCCCCCcccCCchhhhhhh-hhccC
Q 047542           97 GFLCNFCNKIFSTSQALGGHQ-NAHKQ  122 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hq-r~Htg  122 (270)
                      ||.|.+|++.|....-|.+|+ +.|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999995 45654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.06  E-value=0.0005  Score=40.69  Aligned_cols=21  Identities=19%  Similarity=0.156  Sum_probs=17.6

Q ss_pred             cccccccCCCCCCccccCCcCCC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIRKP  181 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iHkp  181 (270)
                      -||++|.++  .-|++|.++|++
T Consensus         9 gC~k~F~~~--~~L~~H~r~HtG   29 (29)
T d1a1ia1           9 SCDRRFSRS--ADLTRHIRIHTG   29 (29)
T ss_dssp             TCCCEESSH--HHHHHHTHHHHT
T ss_pred             CCCcEECch--hHhhhhcCccCC
Confidence            488889988  889999999864

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.77  E-value=0.0024  Score=38.13  Aligned_cols=22  Identities=18%  Similarity=0.253  Sum_probs=19.8

Q ss_pred             cccccccCCCCCCccccCCcCCCC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iHkp~  182 (270)
                      .||++|.++  ..|+.|.+||++.
T Consensus         9 ~C~k~F~~~--~~L~~H~r~Htge   30 (31)
T d1sp2a_           9 YCGKRFTRS--DELQRHKRTHTGE   30 (31)
T ss_dssp             TCCCBCSSH--HHHHHHHTTTSCC
T ss_pred             CCCcCcCCh--hHhhhhcCccccc
Confidence            799999999  8999999999864

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.67  E-value=0.0021  Score=40.36  Aligned_cols=15  Identities=0%  Similarity=-0.097  Sum_probs=10.3

Q ss_pred             CCcccccccccchhc
Q 047542          122 QERALAKRRKEMDMG  136 (270)
Q Consensus       122 gEKPfkCr~c~~~~~  136 (270)
                      .+|||+|.+|+++|.
T Consensus         2 ~~Kpy~C~~Cgk~F~   16 (39)
T d2epsa1           2 VGKPYICQSCGKGFS   16 (39)
T ss_dssp             SSCCEECSSSCCEES
T ss_pred             CCCCccCCCCCCCcC
Confidence            467888877666653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.52  E-value=0.0079  Score=34.74  Aligned_cols=29  Identities=28%  Similarity=0.547  Sum_probs=26.8

Q ss_pred             CCcccCCCCCcccCCchhhhhhhhhccCC
Q 047542           95 QKGFLCNFCNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        95 eKpf~C~~CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      +..|.|..|...|...-.|..|+-.|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            46799999999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.36  E-value=0.0042  Score=36.28  Aligned_cols=20  Identities=10%  Similarity=0.064  Sum_probs=17.9

Q ss_pred             cccccccCCCCCCccccCCcCC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIRK  180 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iHk  180 (270)
                      -||++|.++  ..|+.|.++|+
T Consensus         9 gC~K~F~~~--~~L~~H~r~HT   28 (28)
T d1ubdc4           9 GCNKKFAQS--TNLKSHILTHA   28 (28)
T ss_dssp             TCCCCCSST--TTTHHHHHHHC
T ss_pred             CcCCcCCCH--HHHHHHHhhcc
Confidence            599999999  89999999885

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.15  E-value=0.0026  Score=36.48  Aligned_cols=23  Identities=13%  Similarity=0.119  Sum_probs=20.2

Q ss_pred             CCcccccccCCCCCCccccCCcCCC
Q 047542          157 PNFYGSLFNRSSPLGVSMQPMIRKP  181 (270)
Q Consensus       157 p~~~G~~f~rs~~lgl~~hs~iHkp  181 (270)
                      |..|||+|..+  .-|++|.++|++
T Consensus         5 c~ecgkaf~es--sklkrh~lvhtg   27 (28)
T d1ubdc2           5 CAECGKAFVES--SKLKRHQLVHTG   27 (28)
T ss_dssp             CTTTCCEESSH--HHHHHHGGGTSC
T ss_pred             HHHHhHHHHHH--HHHHHHhhcccC
Confidence            56899999988  889999999986

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.06  E-value=0.0094  Score=34.31  Aligned_cols=26  Identities=31%  Similarity=0.611  Sum_probs=23.1

Q ss_pred             CcccCCC--CCcccCCchhhhhhhhhcc
Q 047542           96 KGFLCNF--CNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        96 Kpf~C~~--CgKsF~sssaL~~Hqr~Ht  121 (270)
                      .||+|..  |++.|...+.|.+|..+|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            5899976  9999999999999998873

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.96  E-value=0.0032  Score=37.32  Aligned_cols=22  Identities=5%  Similarity=-0.096  Sum_probs=19.0

Q ss_pred             cccccccCCCCCCccccCCcCCCC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIRKPS  182 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iHkp~  182 (270)
                      -||++|.++  ..|+.|.++|++.
T Consensus         9 gCgk~F~~~--~~L~~H~r~HtGE   30 (30)
T d2glia3           9 GCRKSYSRL--ENLKTHLRSHTGE   30 (30)
T ss_dssp             TCCCCCSSH--HHHHHHHHHTTTC
T ss_pred             CCCceECCh--hHhhhhcCcCcCC
Confidence            489999998  8899999999863

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.80  E-value=0.022  Score=34.34  Aligned_cols=26  Identities=31%  Similarity=0.691  Sum_probs=20.7

Q ss_pred             ccCCC--CC---cccCCchhhhhhhhhccCC
Q 047542           98 FLCNF--CN---KIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        98 f~C~~--Cg---KsF~sssaL~~Hqr~HtgE  123 (270)
                      |.|..  |.   +.|.....|..|+|.|+||
T Consensus         3 y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             eEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            45543  54   5699999999999999987

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.52  E-value=0.022  Score=32.89  Aligned_cols=24  Identities=25%  Similarity=0.537  Sum_probs=21.4

Q ss_pred             CcccCCCCCcccCCchhhhhhhhh
Q 047542           96 KGFLCNFCNKIFSTSQALGGHQNA  119 (270)
Q Consensus        96 Kpf~C~~CgKsF~sssaL~~Hqr~  119 (270)
                      |||+|.+|.---.+.++|..|.+.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            699999999888899999999764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.45  E-value=0.028  Score=32.35  Aligned_cols=23  Identities=30%  Similarity=0.667  Sum_probs=21.4

Q ss_pred             cccCCCCCcccCCchhhhhhhhh
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNA  119 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~  119 (270)
                      ||.|..|..+|..+.+|..|+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            78999999999999999999864

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.79  E-value=0.0028  Score=37.55  Aligned_cols=21  Identities=14%  Similarity=0.148  Sum_probs=18.0

Q ss_pred             cccccccCCCCCCccccCCcCCC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIRKP  181 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iHkp  181 (270)
                      -||++|.++  ..|+.|.++|++
T Consensus         9 gCgk~F~~~--~~L~~H~r~HTG   29 (30)
T d1ubdc3           9 GCGKRFSLD--FNLRTHVRIHTG   29 (30)
T ss_dssp             TCCCEESCH--HHHHHHHHHHHC
T ss_pred             CCCceECcH--HHcCccccccCC
Confidence            588889888  889999999975

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.34  E-value=0.039  Score=34.00  Aligned_cols=28  Identities=32%  Similarity=0.688  Sum_probs=24.4

Q ss_pred             CCCcccCC--CCCcccCCchhhhhhhhhcc
Q 047542           94 KQKGFLCN--FCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        94 geKpf~C~--~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      .+|||.|.  -|+..|.....|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            47999995  49999999999999988774

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.84  E-value=0.027  Score=32.41  Aligned_cols=14  Identities=14%  Similarity=0.069  Sum_probs=11.5

Q ss_pred             Ccccccccccchhc
Q 047542          123 ERALAKRRKEMDMG  136 (270)
Q Consensus       123 EKPfkCr~c~~~~~  136 (270)
                      ||||.|..||+.|+
T Consensus         1 EkPf~C~~CgrkFA   14 (28)
T d1a1ia3           1 EKPFACDICGRKFA   14 (28)
T ss_dssp             CCCEECTTTCCEES
T ss_pred             CCCcccchhhhhhh
Confidence            68999998888774

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.77  E-value=0.068  Score=30.36  Aligned_cols=25  Identities=28%  Similarity=0.315  Sum_probs=22.6

Q ss_pred             cccCCCCCcccCCchhhhhhhhhcc
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      |-+|..|..+-.++.+|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5579999999999999999999984

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.67  E-value=0.069  Score=30.19  Aligned_cols=22  Identities=27%  Similarity=0.511  Sum_probs=19.9

Q ss_pred             cccCCCCCcccCCchhhhhhhh
Q 047542           97 GFLCNFCNKIFSTSQALGGHQN  118 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr  118 (270)
                      ||+|..||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999999999864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.74  E-value=0.014  Score=35.81  Aligned_cols=26  Identities=12%  Similarity=0.160  Sum_probs=22.8

Q ss_pred             cccccccCCCCCCccccCCcCCCCCCCC
Q 047542          159 FYGSLFNRSSPLGVSMQPMIRKPSYPWV  186 (270)
Q Consensus       159 ~~G~~f~rs~~lgl~~hs~iHkp~~~~~  186 (270)
                      -||++|.+.  .-|+.|.+||++..|..
T Consensus         8 ~C~k~F~~~--~~L~~H~r~Htgekpy~   33 (36)
T d2dlka2           8 ACGKSFNFK--KHLKEHMKLHSDTRDYI   33 (36)
T ss_dssp             TTCCEESSH--HHHHHHHHHHHTSCCCS
T ss_pred             CCCCeeCCh--hHhccccCeeCCCCCEe
Confidence            599999999  99999999999887653

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.33  E-value=0.1  Score=28.82  Aligned_cols=22  Identities=23%  Similarity=0.538  Sum_probs=20.2

Q ss_pred             cccCCCCCcccCCchhhhhhhh
Q 047542           97 GFLCNFCNKIFSTSQALGGHQN  118 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr  118 (270)
                      ||+|.-|...|-++..|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999964

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.12  E-value=0.16  Score=29.57  Aligned_cols=28  Identities=29%  Similarity=0.729  Sum_probs=25.0

Q ss_pred             CcccCCC--CCcccCCchhhhhhhhhccCC
Q 047542           96 KGFLCNF--CNKIFSTSQALGGHQNAHKQE  123 (270)
Q Consensus        96 Kpf~C~~--CgKsF~sssaL~~Hqr~HtgE  123 (270)
                      |.|.|.+  |+..|.....|..|.-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            5688877  999999999999999999986

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=84.18  E-value=0.16  Score=28.54  Aligned_cols=24  Identities=38%  Similarity=0.844  Sum_probs=20.6

Q ss_pred             ccCCC--CCcccCCchhhhhhhhhcc
Q 047542           98 FLCNF--CNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        98 f~C~~--CgKsF~sssaL~~Hqr~Ht  121 (270)
                      |.|.+  |+++|.....|..||-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            55654  9999999999999998886

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.15  E-value=0.2  Score=32.33  Aligned_cols=25  Identities=28%  Similarity=0.681  Sum_probs=22.6

Q ss_pred             cccCCCCCcccCCchhhhhhhhhcc
Q 047542           97 GFLCNFCNKIFSTSQALGGHQNAHK  121 (270)
Q Consensus        97 pf~C~~CgKsF~sssaL~~Hqr~Ht  121 (270)
                      .|.|-.|+|.|.....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5789999999999999999988774

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.43  E-value=0.13  Score=29.90  Aligned_cols=14  Identities=7%  Similarity=0.036  Sum_probs=12.2

Q ss_pred             Ccccccccccchhc
Q 047542          123 ERALAKRRKEMDMG  136 (270)
Q Consensus       123 EKPfkCr~c~~~~~  136 (270)
                      ||||.|..|.++|.
T Consensus         1 ekp~~cpic~qrfk   14 (32)
T d2epqa1           1 EKPYSCPVCGLRFK   14 (32)
T ss_dssp             CCSSEETTTTEECS
T ss_pred             CCCcccchHHHHhh
Confidence            68999999998873

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.86  E-value=0.079  Score=29.53  Aligned_cols=23  Identities=13%  Similarity=0.098  Sum_probs=18.6

Q ss_pred             CCcccccccCCCCCCccccCCcCCC
Q 047542          157 PNFYGSLFNRSSPLGVSMQPMIRKP  181 (270)
Q Consensus       157 p~~~G~~f~rs~~lgl~~hs~iHkp  181 (270)
                      |..||+.|+|+  =-|++|.+-|++
T Consensus         4 c~~c~kcfsrk--dklk~hmr~htg   26 (26)
T d2dmda2           4 CEVCGKCFSRK--DKLKTHMRCHTG   26 (26)
T ss_dssp             BTTTTBCCCCH--HHHHHHGGGCCC
T ss_pred             cchhhhHhcch--hHHHHHhhccCC
Confidence            45888889988  778889888864

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.53  E-value=0.22  Score=31.05  Aligned_cols=17  Identities=0%  Similarity=-0.300  Sum_probs=14.3

Q ss_pred             cCCcccccccccchhcc
Q 047542          121 KQERALAKRRKEMDMGA  137 (270)
Q Consensus       121 tgEKPfkCr~c~~~~~~  137 (270)
                      +|-|||.|..|+++|-.
T Consensus         1 TGiKPYeC~~C~KrFMW   17 (44)
T d2csha2           1 TGIKPYECNICAKRFMW   17 (44)
T ss_dssp             CCCCCEECSSSCCEESC
T ss_pred             CCCCceeccchhhhhhh
Confidence            47799999999998843