Citrus Sinensis ID: 047635

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
Protein Sequence
MKVLVVARPLFPSLYINNAPFFSPHKHLLSSQASSRTSPIFSLSKHHREKTSTAVMATCIDTSQISQDPSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI
Secondary Structure (PSIPRED)
ccEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccEEEEEccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccEEEEEccccEEEEccEEEcccEEEEcccccccccccccccccccccccEEccccEEEccEEEccccEEccccEEccccccccEEEccccEEEccccccccccccccccccccccccHHccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccEEccEEEEEcccEEEEEEEEEEcccEEEEEEEEccccccccccccccEccccEEccccEEccccEEccccEEccccEEcccEcccEEEEEccEEEEccccccccccccccccccccccHHHcccccc
Coil and Loop (DISEMBL)
MKVLVvarplfpslyinnapffsphkhllssqassrtspifslskhhrektsTAVMATCidtsqisqdpsrsqnddhayryakhcrpsfsdrvscvpfnrnqeqaihtrsniddgddaDVDLWLKMQDEArsdveeepvlsSYYFASILSHKSLESALAKHLSIKlsslslqsgtLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSevfsvdihpgakigrgllfdhatgvvvgetavigdnVSILHNvtlggtgkmsgdrhpkigngvlvgagtcilgnikigdgakigagsvvlkdvpprttavgnparliggkenpfmldkipsftmdhtshihewsdyvi
Flexible Loop (DISEMBL)
MKVLVVARPLFPSLYINNAPFFSPHKHLLSSQASSRTSPIFSLSKHHREKTSTAVMATCIDTsqisqdpsrsqnDDHAYRYAKHcrpsfsdrvsCVPFNRNQeqaihtrsniddgddADVDLWLKMQDEArsdveeepvLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGEtavigdnvsILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGsvvlkdvpprttavgnparliggkenpFMLDKIPSFTMDHTSHIHEWSDYVI
Low Complexity Region (SEG)
MKVLVVARPLFPSLYINNAPFFSPHKHLLSSQASSRTSPIFSLSKHHREKTSTAVMATCIDTSQISQDPSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRSNIddgddadvdLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEsalakhlsiklsslslQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILgnikigdgakigagSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI
Disordered region (IsUnstruct)
**VLVVARPLFPSLYINNAPFFS********************************************************RYAKHCRPSFSDRVSCVPF********************DVDLWLK*************VLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEW*****
Disordered Region (DISOPRED)
*******RPLFPSLYINNAPFFSPHK*****************************MATC********************RYAKHCRPSFS*****************************VDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE***********TMDHTSHIHEWSDYVI
Disordered Region (DISEMBL)
MKVLVVARPLFPSLYINNAPFFSPHKH************IFSLSKHHREKTSTAVMATCIDTS*************HAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI
Disordered Region (DISPRO)
MKVLVVARPLFPSLYINNAPFFSPHKHLLSSQASSRTSPIFSLSKHHREKTSTAVMATCIDTSQISQDPSRSQNDDHAYRYAKHCRPSFSDRVSCVP******************DDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE***************TSHIHEWSDYVI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKVLVVARPLFPSLYINNAPFFSPHKHLLSSQASSRTSPIFSLSKHHREKTSTAVMATCIDTSQISQDPSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	388	2.2.26 [Sep-21-2011]
Q39218	391	Serine acetyltransferase	yes	no	0.938	0.930	0.611	1e-129
Q42588	314	Serine acetyltransferase	no	no	0.806	0.996	0.676	1e-124
Q42538	312	Serine acetyltransferase	no	no	0.688	0.855	0.638	4e-97
Q8W0E4	303	Probable serine acetyltra	yes	no	0.690	0.884	0.619	3e-91
Q0DGG8	340	Probable serine acetyltra	no	no	0.708	0.808	0.586	3e-88
Q10S58	354	Probable serine acetyltra	no	no	0.664	0.728	0.520	3e-76
Q8W2B8	355	Serine acetyltransferase	no	no	0.644	0.704	0.568	5e-76
Q8S895	323	Serine acetyltransferase	no	no	0.644	0.773	0.533	2e-71
Q10QH1	315	Probable serine acetyltra	no	no	0.667	0.822	0.554	2e-71
P0A9D7	273	Serine acetyltransferase	yes	no	0.667	0.948	0.522	3e-70

>sp|Q39218|SAT3_ARATH Serine acetyltransferase 3, mitochondrial OS=Arabidopsis thaliana GN=SAT3 PE=1 SV=3

 Score =  460 bits (1184), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 239/391 (61%), Positives = 295/391 (75%), Gaps = 27/391 (6%)

Query: 13  SLYI--NNAPFFSPHKHLLSSQASSRTSPIFSLSKHHR-----EKTSTAVMATCIDTS-- 63
           SLY+  +++P  + H  LL S  SS+        KHH             MA CIDT   
Sbjct: 13  SLYMLRSSSPHINHHSFLLPSFVSSKF-------KHHTLSPPPSPPPPPPMAACIDTCRT 65

Query: 64  ---QIS-QDPSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRSNIDDGD-DA 118
              QIS +D S+  +D+  +RY  + R  + DR S   FN  Q + +HTR  ++D D DA
Sbjct: 66  GKPQISPRDSSKHHDDESGFRYMNYFR--YPDRSS---FNGTQTKTLHTRPLLEDLDRDA 120

Query: 119 DVD-LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLF 177
           +VD +W K+++EA+SD+ +EP++S+YY ASI+S +SLE+ALA  LS+KLS+L+L S TLF
Sbjct: 121 EVDDVWAKIREEAKSDIAKEPIVSAYYHASIVSQRSLEAALANTLSVKLSNLNLPSNTLF 180

Query: 178 ELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQG 237
           +LF GV+  + +I+++VK DL+A+KERDPACISY HC L+FKGFLACQAHRIAH LW Q 
Sbjct: 181 DLFSGVLQGNPDIVESVKLDLLAVKERDPACISYVHCFLHFKGFLACQAHRIAHELWTQD 240

Query: 238 RKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGG 297
           RK+LALLIQNRVSE F+VD HPGAKIG G+L DHAT +V+GETAV+G+NVSILHNVTLGG
Sbjct: 241 RKILALLIQNRVSEAFAVDFHPGAKIGTGILLDHATAIVIGETAVVGNNVSILHNVTLGG 300

Query: 298 TGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           TGK  GDRHPKIG+GVL+GAGTCILGNI IG+GAKIGAGSVVLKDVPPRTTAVGNPARL+
Sbjct: 301 TGKQCGDRHPKIGDGVLIGAGTCILGNITIGEGAKIGAGSVVLKDVPPRTTAVGNPARLL 360

Query: 358 GGKENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
           GGK+NP   DKIP  TMD TSHI EWSDYVI
Sbjct: 361 GGKDNPKTHDKIPGLTMDQTSHISEWSDYVI 391

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 0

>sp|Q42588|SAT1_ARATH Serine acetyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=SAT1 PE=1 SV=2

 Score =  446 bits (1146), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 226/334 (67%), Positives = 266/334 (79%), Gaps = 21/334 (6%)

Query: 56  MATCIDTSQISQDPSRSQNDDHAYRYAKHC-RPSFSDRVSCVPFNRNQEQAIHTRSNIDD 114
           MATCIDT +       +Q+DD  +   K+  RP FS        NR     IH  + I+D
Sbjct: 1   MATCIDTCRTGN----TQDDDSRFCCIKNFFRPGFS-------VNRK----IH-HTQIED 44

Query: 115 GDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSG 174
            DD    +W+KM +EA+SDV++EP+LS+YY+ASI SH+SLESALA  LS+KLS+L+L S 
Sbjct: 45  DDD----VWIKMLEEAKSDVKQEPILSNYYYASITSHRSLESALAHILSVKLSNLNLPSN 100

Query: 175 TLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLW 234
           TLFELF+ V+ E  EII++ K DLIA+KERDPACISY HC L FKGFLACQAHRIAH LW
Sbjct: 101 TLFELFISVLEESPEIIESTKQDLIAVKERDPACISYVHCFLGFKGFLACQAHRIAHTLW 160

Query: 235 LQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVT 294
            Q RK++ALLIQNRVSE F+VDIHPGAKIG+G+L DHATGVV+GETAV+GDNVSILH VT
Sbjct: 161 KQNRKIVALLIQNRVSESFAVDIHPGAKIGKGILLDHATGVVIGETAVVGDNVSILHGVT 220

Query: 295 LGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPA 354
           LGGTGK SGDRHPKIG+GVL+GAG+CILGNI IG+GAKIG+GSVV+KDVP RTTAVGNPA
Sbjct: 221 LGGTGKQSGDRHPKIGDGVLIGAGSCILGNITIGEGAKIGSGSVVVKDVPARTTAVGNPA 280

Query: 355 RLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
           RLIGGKENP   DKIP  TMD TS++ EWSDYVI
Sbjct: 281 RLIGGKENPRKHDKIPCLTMDQTSYLTEWSDYVI 314

May be involved in detoxification process by mediating the production of glutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q42538|SAT5_ARATH Serine acetyltransferase 5 OS=Arabidopsis thaliana GN=SAT5 PE=1 SV=1

 Score =  355 bits (910), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 171/268 (63%), Positives = 211/268 (78%), Gaps = 1/268 (0%)

Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFM 181
           LW +++ EAR D E EP L+SY +++ILSH SLE +++ HL  KL S +L S  L++LF+
Sbjct: 45  LWTQIKAEARRDAEAEPALASYLYSTILSHSSLERSISFHLGNKLCSSTLLSTLLYDLFL 104

Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                D  +  A  ADL A + RDPACIS++HCLLN+KGFLA QAHR++H+LW Q RK L
Sbjct: 105 NTFSSDPSLRNATVADLRAARVRDPACISFSHCLLNYKGFLAIQAHRVSHKLWTQSRKPL 164

Query: 242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
           AL + +R+S+VF+VDIHP AKIG+G+L DHATGVVVGETAVIG+NVSILH+VTLGGTGK 
Sbjct: 165 ALALHSRISDVFAVDIHPAAKIGKGILLDHATGVVVGETAVIGNNVSILHHVTLGGTGKA 224

Query: 302 SGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE 361
            GDRHPKIG+G L+GAG  ILGN+KIG GAK+GAGSVVL DVP R TAVGNPARL+GGKE
Sbjct: 225 CGDRHPKIGDGCLIGAGATILGNVKIGAGAKVGAGSVVLIDVPCRGTAVGNPARLVGGKE 284

Query: 362 NPFMLD-KIPSFTMDHTSHIHEWSDYVI 388
            P + D + P  +MDHTS I EWSDY+I
Sbjct: 285 KPTIHDEECPGESMDHTSFISEWSDYII 312

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q8W0E4|SAT1_ORYSJ Probable serine acetyltransferase 1 OS=Oryza sativa subsp. japonica GN=SAT1 PE=2 SV=1

 Score =  335 bits (860), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 169/273 (61%), Positives = 214/273 (78%), Gaps = 5/273 (1%)

Query: 117 DADVD-LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGT 175
           DAD   +W +++ EAR D + EP L+S+ +A++LSH SL+ +LA HL+ KL S +L S  
Sbjct: 35  DADESWVWSQIKAEARRDADAEPALASFLYATVLSHPSLDRSLAFHLANKLCSSTLLSTL 94

Query: 176 LFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWL 235
           L++LF+  +     +  AV ADL+A + RDPAC+ ++HCLLN+KGFLA QA R+AH LW 
Sbjct: 95  LYDLFVASLAAHPTLRAAVVADLLAARSRDPACVGFSHCLLNYKGFLAIQAQRVAHVLWA 154

Query: 236 QGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTL 295
           Q R+ LAL +Q+RV+EVF+VDIHP A IG+G+L DHATGVV+GETAVIGDNVSILH+VTL
Sbjct: 155 QDRRALALALQSRVAEVFAVDIHPAAAIGKGVLLDHATGVVIGETAVIGDNVSILHHVTL 214

Query: 296 GGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAR 355
           GGTGK  GDRHPKIG+GVL+GAG  ILGN++IG GAKIGAGS+VL DVPPRTTAVGNPAR
Sbjct: 215 GGTGKAVGDRHPKIGDGVLIGAGATILGNVRIGAGAKIGAGSLVLIDVPPRTTAVGNPAR 274

Query: 356 LIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
           L+GGK+     D +P  +MDHTS I +WSDY I
Sbjct: 275 LLGGKKG----DDMPGESMDHTSFIQQWSDYSI 303

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q0DGG8|SAT5_ORYSJ Probable serine acetyltransferase 5 OS=Oryza sativa subsp. japonica GN=SAT5 PE=2 SV=2

 Score =  325 bits (834), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 162/276 (58%), Positives = 210/276 (76%), Gaps = 1/276 (0%)

Query: 114 DGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQS 173
           + +D +  +W +++ EAR D + EP L+S+ +A++LSH SL  +++ HL+ KL S +L S
Sbjct: 65  ESEDEESWVWSQIKAEARRDADAEPALASFLYATVLSHPSLPRSISFHLANKLCSSTLLS 124

Query: 174 GTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRL 233
             L++LF+        +  AV ADL+A + RDPAC+ ++ CLLNFKGFLA QAHR++H L
Sbjct: 125 TLLYDLFLASFTAHPSLRAAVVADLLAARSRDPACVGFSQCLLNFKGFLAIQAHRVSHVL 184

Query: 234 WLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNV 293
           W Q R+ LAL +Q+RV++VF+VDIHP A +G+G+L DHATGVV+GETAV+GDNVSILH+V
Sbjct: 185 WAQQRRPLALALQSRVADVFAVDIHPAAVVGKGILLDHATGVVIGETAVVGDNVSILHHV 244

Query: 294 TLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNP 353
           TLGGTGK  GDRHPKIG+GVL+GAG  ILGN+KIG GAKIGAGSVVL DVP R TAVGNP
Sbjct: 245 TLGGTGKAVGDRHPKIGDGVLIGAGATILGNVKIGAGAKIGAGSVVLIDVPARNTAVGNP 304

Query: 354 ARLIGGKENPFMLDK-IPSFTMDHTSHIHEWSDYVI 388
           ARLIG K      D+ +P  +MDHTS I +WSDY I
Sbjct: 305 ARLIGRKNGEVEKDEDMPGESMDHTSFIRQWSDYTI 340

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q10S58|SAT2_ORYSJ Probable serine acetyltransferase 2 OS=Oryza sativa subsp. japonica GN=SAT2 PE=2 SV=1

 Score =  285 bits (730), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 137/263 (52%), Positives = 194/263 (73%), Gaps = 5/263 (1%)

Query: 116 DDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGT 175
           D A   +W  ++ EA+S+ E+EP+LSS+ +AS+LSH  LE AL+  L+ +L   +L +  
Sbjct: 74  DAAGDPIWEAVKSEAKSEAEKEPILSSFLYASVLSHDCLERALSFVLANRLEDPTLLATQ 133

Query: 176 LFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWL 235
           L ++F  V++ +++I ++++ D  A K+RDPAC  Y+  LL  KG+ + Q++RIAH LW 
Sbjct: 134 LIDIFNDVMMNNKDIRRSIRLDAQAFKDRDPACAQYSWALLYLKGYHSVQSYRIAHVLWN 193

Query: 236 QGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTL 295
           QGRKVLAL +Q+R+SEVF+VDIHP A+IG G+L DH TG+V+GETA++G+ VS++  VTL
Sbjct: 194 QGRKVLALALQSRISEVFAVDIHPAARIGEGILLDHGTGLVIGETAIVGNWVSLMQGVTL 253

Query: 296 GGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAR 355
           GGTGK +GDRHPKIG G L+GAG  ILGNI +G+GA I AGS+VLKDVPP + AVGNPA+
Sbjct: 254 GGTGKENGDRHPKIGQGALLGAGATILGNINVGEGAMIAAGSLVLKDVPPHSMAVGNPAK 313

Query: 356 LIGGKENPFMLDKIPSFTMDHTS 378
           ++G K+      + PS TM H +
Sbjct: 314 VVGYKDK-----EDPSLTMKHDA 331

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q8W2B8|SAT4_ARATH Serine acetyltransferase 4 OS=Arabidopsis thaliana GN=SAT4 PE=1 SV=1

 Score =  285 bits (729), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 145/255 (56%), Positives = 195/255 (76%), Gaps = 5/255 (1%)

Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFM 181
           +W  +++EA+ + EEEPVLSS+ +ASILSH  LE AL+  L+ +L + +L +  L ++F 
Sbjct: 73  IWDSIREEAKLEAEEEPVLSSFLYASILSHDCLEQALSFVLANRLQNPTLLATQLMDIFC 132

Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
            V+V D+ I  +++ D+ A K+RDPAC+SY+  +L+ KG+LA QA+R+AH+LW QGRK+L
Sbjct: 133 NVMVHDRGIQSSIRLDVQAFKDRDPACLSYSSAILHLKGYLALQAYRVAHKLWKQGRKLL 192

Query: 242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
           AL +Q+RVSEVF +DIHP A+IG+G+L DH TGVV+GETAVIGD VSILH VTLGGTGK 
Sbjct: 193 ALALQSRVSEVFGIDIHPAARIGKGILLDHGTGVVIGETAVIGDRVSILHGVTLGGTGKE 252

Query: 302 SGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE 361
           +GDRHP IG+G L+GA   ILGNIKIG GA + AGS+VLKDVP  +   GNPA+LIG   
Sbjct: 253 TGDRHPNIGDGALLGACVTILGNIKIGAGAMVAAGSLVLKDVPSHSMVAGNPAKLIG--- 309

Query: 362 NPFMLDKIPSFTMDH 376
             F+ ++ PS TM+H
Sbjct: 310 --FVDEQDPSMTMEH 322

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q8S895|SAT2_ARATH Serine acetyltransferase 2 OS=Arabidopsis thaliana GN=SAT2 PE=1 SV=2

 Score =  270 bits (689), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 136/255 (53%), Positives = 187/255 (73%), Gaps = 5/255 (1%)

Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFM 181
           +W  +++EA+ + E+EP+LSS+ +A IL+H  LE AL   L+ +L + +L +  L ++F 
Sbjct: 36  IWDAIREEAKLEAEKEPILSSFLYAGILAHDCLEQALGFVLANRLQNPTLLATQLLDIFY 95

Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
           GV++ D+ I  +++ DL A K+RDPAC+SY+  +L+ KG+ A QA+R+AH+LW +GRK+L
Sbjct: 96  GVMMHDKGIQSSIRHDLQAFKDRDPACLSYSSAILHLKGYHALQAYRVAHKLWNEGRKLL 155

Query: 242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
           AL +Q+R+SEVF +DIHP A+IG G+L DH TGVV+GETAVIG+ VSILH VTLGGTGK 
Sbjct: 156 ALALQSRISEVFGIDIHPAARIGEGILLDHGTGVVIGETAVIGNGVSILHGVTLGGTGKE 215

Query: 302 SGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE 361
           +GDRHPKIG G L+GA   ILGNI IG GA + AGS+VLKDVP  +   GNPA+LI    
Sbjct: 216 TGDRHPKIGEGALLGACVTILGNISIGAGAMVAAGSLVLKDVPSHSVVAGNPAKLI---- 271

Query: 362 NPFMLDKIPSFTMDH 376
              M ++ PS  M H
Sbjct: 272 -RVMEEQDPSLAMKH 285

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|Q10QH1|SAT4_ORYSJ Probable serine acetyltransferase 4 OS=Oryza sativa subsp. japonica GN=SAT4 PE=2 SV=1

 Score =  269 bits (688), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 148/267 (55%), Positives = 188/267 (70%), Gaps = 8/267 (2%)

Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLS-SLSLQSGTLFELF 180
           +W  ++ EA+ D ++EP+L  +Y   +LS  SLESALA  L+ KL    +L    L +L 
Sbjct: 54  VWDVLRAEAQDDADDEPLLRKFYHDLVLSRPSLESALASLLAAKLCIPGALPQDQLRDLL 113

Query: 181 MGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKV 240
            G +    E  +A +ADL+A ++RDPAC    HC L +KGFLA QAHR AH LW   R+ 
Sbjct: 114 AGALAAHPEAGRAARADLVAARDRDPACAKMVHCFLYYKGFLALQAHRAAHALWSDNRRA 173

Query: 241 LALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGK 300
            ALL+Q+R SEVF VDIHPGA+IG G+L DHATGVV+GETAV+G +VSILH VTLGGTGK
Sbjct: 174 PALLLQSRASEVFGVDIHPGARIGCGILLDHATGVVIGETAVVGYDVSILHGVTLGGTGK 233

Query: 301 MSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAR-LIGG 359
            SGDRHPK+G+GVL+GAG  +LGN+ IGDGAKIGAG+VVL+DV   TTAVGNPA+ +IG 
Sbjct: 234 ESGDRHPKVGDGVLIGAGASVLGNVHIGDGAKIGAGAVVLRDVADGTTAVGNPAKPIIGK 293

Query: 360 KENPFML-DKIPSFTMDHTSHIHEWSD 385
           K  P    +++P  TM+       WSD
Sbjct: 294 KAAPQRRPEELPGVTME-----QRWSD 315

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

>sp|P0A9D7|CYSE_SHIFL Serine acetyltransferase OS=Shigella flexneri GN=cysE PE=3 SV=1

 Score =  265 bits (678), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 140/268 (52%), Positives = 186/268 (69%), Gaps = 9/268 (3%)

Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFM 181
           +W  ++ EAR+  + EP+L+S+Y A++L H++L SAL+  L+ KLSS  + +  + E+  
Sbjct: 9   VWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPAIAIREVVE 68

Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                D E+I +   D+ A++ RDPA   Y+  LL  KGF A QA+RI H LW QGR+ L
Sbjct: 69  EAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRAL 128

Query: 242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
           A+ +QN+VS  F VDIHP AKIGRG++ DHATG+VVGETAVI ++VSIL +VTLGGTGK 
Sbjct: 129 AIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKS 188

Query: 302 SGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE 361
            GDRHPKI  GV++GAG  ILGNI++G GAKIGAGSVVL+ VPP TTA G PAR++G  +
Sbjct: 189 GGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPD 248

Query: 362 NPFMLDKIPSFTMDH----TSHIHEWSD 385
           +    DK PS  MD      +H  E+ D
Sbjct: 249 S----DK-PSMDMDQHFNGINHTFEYGD 271

Shigella flexneri (taxid: 623)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
359494303	493	PREDICTED: serine acetyltransferase 1, c	0.912	0.718	0.707	1e-151
255563442	396	Serine acetyltransferase 3, mitochondria	0.974	0.954	0.679	1e-149
452090870	395	serine acetyltransferase [Prunus persica	0.976	0.959	0.658	1e-147
224061208	334	predicted protein [Populus trichocarpa]	0.847	0.985	0.748	1e-144
118489738	334	unknown [Populus trichocarpa x Populus d	0.847	0.985	0.748	1e-144
356524352	387	PREDICTED: serine acetyltransferase 1, c	0.958	0.961	0.672	1e-137
47779324	395	mitochondrial serine acetyltransferase [	0.940	0.924	0.646	1e-134
356566537	391	PREDICTED: serine acetyltransferase 3, m	0.956	0.948	0.666	1e-133
39841350	367	serine O-acetyltransferase 1 [Glycine ma	0.845	0.893	0.740	1e-133
23343583	324	serine acetyltransferase 4 [Nicotiana ta	0.814	0.975	0.711	1e-133

>gi|359494303|ref|XP_002264933.2| PREDICTED: serine acetyltransferase 1, chloroplastic-like [Vitis vinifera]

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/380 (70%), Positives = 310/380 (81%), Gaps = 26/380 (6%)

Query: 17  NNAPFFSPHKHLLSSQASSRTSPIFSLSKHHREKTSTAVMATCIDTS--------QISQD 68
           N  PF  PH+          T+P FSL KH         MA CIDTS        Q+S +
Sbjct: 132 NPPPFSPPHRC---------TTP-FSLPKHR------LFMAACIDTSRAETAQTNQLSCE 175

Query: 69  PSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRSNIDDGDDADVDLWLKMQD 128
           P+ SQ DDH Y++A  CRPSFSD VSCVP ++N  + IHT S ++D D    DLWLK+QD
Sbjct: 176 PNGSQLDDHMYKFANFCRPSFSDLVSCVPMSQNGRKRIHT-STVED-DLCGADLWLKIQD 233

Query: 129 EARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQ 188
           EARSDVE+EP+LSSYY++ ILSHKSLESALA HLSIKLS+ SL S TL++LFMGV+VED 
Sbjct: 234 EARSDVEQEPILSSYYYSLILSHKSLESALANHLSIKLSNSSLPSSTLYDLFMGVLVEDG 293

Query: 189 EIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNR 248
           EI+ AVK DL A+KERDPACISY  CL+NFKGFLACQAHR+AHRLW QGRK+LAL+IQNR
Sbjct: 294 EIMGAVKDDLRAVKERDPACISYVQCLVNFKGFLACQAHRVAHRLWSQGRKILALVIQNR 353

Query: 249 VSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPK 308
           VSE F+VDIHPGAKIGRG+L DHATGVV+GETAVIGD+VSILHNVTLGGTGK+SGDRHPK
Sbjct: 354 VSEAFAVDIHPGAKIGRGILLDHATGVVIGETAVIGDDVSILHNVTLGGTGKVSGDRHPK 413

Query: 309 IGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDK 368
           +G+GVL+GAGTCILGN++IGDGAK+GAGSVVLK+VPP+TTAVGNPARL+GGKENP  LDK
Sbjct: 414 LGDGVLIGAGTCILGNVRIGDGAKVGAGSVVLKEVPPKTTAVGNPARLVGGKENPIKLDK 473

Query: 369 IPSFTMDHTSHIHEWSDYVI 388
           IPSFTMD TSHI EWSDYVI
Sbjct: 474 IPSFTMDQTSHISEWSDYVI 493

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563442|ref|XP_002522723.1| Serine acetyltransferase 3, mitochondrial precursor, putative [Ricinus communis] gi|223537961|gb|EEF39574.1| Serine acetyltransferase 3, mitochondrial precursor, putative [Ricinus communis]

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 276/406 (67%), Positives = 319/406 (78%), Gaps = 28/406 (6%)

Query: 1   MKVLVVARPLFPSLY-INNAPFFSPHKHLLSSQASSRTSPIFSLSKHHREKTSTAVMATC 59
           MKVL  A    PSLY   + PF S HK  LS Q SS    I  LS H     S + MA C
Sbjct: 1   MKVLAAA----PSLYKAFSPPFSSLHKPFLSPQVSSS---ILPLSNH---LYSISSMAAC 50

Query: 60  IDT-----SQISQDPSRSQN------DDHAYRYAK-HCRPSFSDRVSCVPFNRNQEQAIH 107
           +DT     S++S+DP+R Q+      D+   +Y K +CRPSFSD VSC+P ++N  + +H
Sbjct: 51  VDTPRTDTSKLSRDPNRPQSQTDHHHDNSFSKYVKNYCRPSFSDHVSCIPVSKNHIKTLH 110

Query: 108 TRSNIDDGD-----DADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHL 162
           TR  ++D D     +A  D WLKMQ+EAR DV++EP+LSSYYF SILS  SLE ALA HL
Sbjct: 111 TRPVLEDRDQDQEIEAKEDPWLKMQEEARLDVDQEPILSSYYFTSILSQASLERALANHL 170

Query: 163 SIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFL 222
           +IKLS+ SL + TLF++F+GV+ E+Q+II +VKADL A+KERDPACISY HC LNFKGFL
Sbjct: 171 AIKLSNSSLPTSTLFDIFIGVLEENQDIIDSVKADLRAVKERDPACISYVHCFLNFKGFL 230

Query: 223 ACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAV 282
           +CQAHRIAH+LW QGR VLA+LIQNRVSE F+VDIHPGAKIG+G+L DHATGVVVGETAV
Sbjct: 231 SCQAHRIAHKLWTQGRTVLAILIQNRVSEAFAVDIHPGAKIGQGILLDHATGVVVGETAV 290

Query: 283 IGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD 342
           IG+NVSILHNVTLGGTGK SGDRHPKIG+GVL+GAGTCILGNIKIGDGAKIGA SVVLKD
Sbjct: 291 IGNNVSILHNVTLGGTGKTSGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGACSVVLKD 350

Query: 343 VPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
           VP RTTAVGNPARLIGGKENP  LDKIPSFTMDHTSHIHEWSDYVI
Sbjct: 351 VPARTTAVGNPARLIGGKENPTKLDKIPSFTMDHTSHIHEWSDYVI 396

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|452090870|gb|AGF95105.1| serine acetyltransferase [Prunus persica]

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/404 (65%), Positives = 318/404 (78%), Gaps = 25/404 (6%)

Query: 1   MKVLVVARPLFPSLYINNAPFFSPHKHLLSSQASSRT-----SPIFSLSKHHREKTSTAV 55
           MK L VAR L+ +     +PF S  K LLS  +S  T     SPI SL K   ++     
Sbjct: 1   MKGLAVARSLYKA-----SPFLSNQK-LLSPNSSVHTNFQFLSPISSLPK---QQAILNP 51

Query: 56  MATCIDTSQ--------ISQDPSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIH 107
           MA CIDTS+        +S+DP+RS+ D+  Y++ + CR +FSD+VSC+P  +N+ +  H
Sbjct: 52  MAACIDTSRTGSPQNKPLSRDPNRSKTDEDPYQFMRFCRGNFSDQVSCLPICQNRTKTTH 111

Query: 108 TRSNIDD---GDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSI 164
           TR  +DD    +D    LWLKMQDEAR+D+ +EP+LS++ +ASIL+H SLESALA HLS+
Sbjct: 112 TRRILDDLEQDEDKGDGLWLKMQDEARADINQEPMLSNFIYASILAHASLESALANHLSV 171

Query: 165 KLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLAC 224
           KLS+ SL  GTL ++FMGV+ EDQE+IKAVK DL A+KERDPAC+SY HC LNFKGFLAC
Sbjct: 172 KLSNSSLSLGTLVDIFMGVLTEDQEVIKAVKDDLRAVKERDPACVSYTHCFLNFKGFLAC 231

Query: 225 QAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIG 284
           Q+HRIAH+LW QGR VLALLIQNRVSEVF+VDIHPGAKIG G+L DHATGVVVGETAVIG
Sbjct: 232 QSHRIAHKLWSQGRTVLALLIQNRVSEVFAVDIHPGAKIGHGILLDHATGVVVGETAVIG 291

Query: 285 DNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVP 344
           +NVSILHNVTLGGTGK SGDRHPKIG+GVL+GAGTCILGNIKIG+GAKIGA SVVLK+VP
Sbjct: 292 NNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGEGAKIGACSVVLKEVP 351

Query: 345 PRTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
           PRTTAVGNPARL+GGKENP   DKIPS+TMDHT ++ EWSDYVI
Sbjct: 352 PRTTAVGNPARLLGGKENPIKHDKIPSYTMDHTYNMSEWSDYVI 395

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061208|ref|XP_002300371.1| predicted protein [Populus trichocarpa] gi|222847629|gb|EEE85176.1| predicted protein [Populus trichocarpa]

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 253/338 (74%), Positives = 287/338 (84%), Gaps = 9/338 (2%)

Query: 56  MATCIDT-----SQISQDPSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRS 110
           MA CIDT     SQ+S++P+RSQ+DDHAY YAK CRP     VSC PF+RN  + I+  +
Sbjct: 1   MAACIDTPRTDTSQLSRNPNRSQSDDHAYNYAKLCRPP---HVSCTPFSRNHTKTINKPA 57

Query: 111 NIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLS 170
            +DD D+ +  LWLKM++EAR DVE+EP+LSSYYF SIL HKSLE ALA  LSIKLS+ S
Sbjct: 58  VVDDFDEQN-SLWLKMKEEARFDVEQEPILSSYYFTSILCHKSLERALANLLSIKLSNSS 116

Query: 171 LQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIA 230
           L S TLF+LF GV+ E  EII+AV+ DL A+KERDPAC+SY H  LNFKGFLACQAHR+A
Sbjct: 117 LPSTTLFDLFAGVLEESPEIIRAVEEDLRAVKERDPACMSYVHSFLNFKGFLACQAHRVA 176

Query: 231 HRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSIL 290
           H+LW QGR++LALLIQNR SEVF+VDIHPGAKIG+G+LFDHATGV+VGETAVIG+NVSIL
Sbjct: 177 HKLWSQGRQILALLIQNRASEVFAVDIHPGAKIGQGILFDHATGVIVGETAVIGNNVSIL 236

Query: 291 HNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAV 350
           HNVTLGGTGK  GDRHPKIGNGVL+GAGTCILGNIKIGDGAKIGAGSVVL +VPPRTTAV
Sbjct: 237 HNVTLGGTGKACGDRHPKIGNGVLIGAGTCILGNIKIGDGAKIGAGSVVLHEVPPRTTAV 296

Query: 351 GNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
           GNPARLIGGK NP  LDKIPSFTMDHTSHI EWSDYVI
Sbjct: 297 GNPARLIGGKANPIKLDKIPSFTMDHTSHISEWSDYVI 334

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489738|gb|ABK96670.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 253/338 (74%), Positives = 286/338 (84%), Gaps = 9/338 (2%)

Query: 56  MATCIDT-----SQISQDPSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRS 110
           MA CIDT     SQ+S++P+RSQ+DDHAY YAK CRP     VSC PF+RN  + I+  +
Sbjct: 1   MAACIDTPRTDTSQLSRNPNRSQSDDHAYNYAKLCRPP---HVSCTPFSRNHTKTINKPA 57

Query: 111 NIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLS 170
            +DD D  +  LWLKM++EAR DVE+EP+LSSYYF SIL HKSLE ALA  LSIKLS+ S
Sbjct: 58  VVDDFDQQN-SLWLKMKEEARFDVEQEPILSSYYFTSILCHKSLERALANLLSIKLSNSS 116

Query: 171 LQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIA 230
           L S TLF+LF GV+ E  EII+AV+ DL A+KERDPAC+SY H  LNFKGFLACQAHR+A
Sbjct: 117 LPSTTLFDLFAGVLEESPEIIRAVEEDLRAVKERDPACMSYVHSFLNFKGFLACQAHRVA 176

Query: 231 HRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSIL 290
           H+LW QGR++LALLIQNR SEVF+VDIHPGAKIG+G+LFDHATGV+VGETAVIG+NVSIL
Sbjct: 177 HKLWSQGRQILALLIQNRASEVFAVDIHPGAKIGQGILFDHATGVIVGETAVIGNNVSIL 236

Query: 291 HNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAV 350
           HNVTLGGTGK  GDRHPKIGNGVL+GAGTCILGNIKIGDGAKIGAGSVVL +VPPRTTAV
Sbjct: 237 HNVTLGGTGKACGDRHPKIGNGVLIGAGTCILGNIKIGDGAKIGAGSVVLHEVPPRTTAV 296

Query: 351 GNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
           GNPARLIGGK NP  LDKIPSFTMDHTSHI EWSDYVI
Sbjct: 297 GNPARLIGGKANPIKLDKIPSFTMDHTSHISEWSDYVI 334

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524352|ref|XP_003530793.1| PREDICTED: serine acetyltransferase 1, chloroplastic-like [Glycine max]

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 271/403 (67%), Positives = 312/403 (77%), Gaps = 31/403 (7%)

Query: 1   MKVLVVAR----PLFPSLYINNAPF-FSP-HKHLLSSQASSRTSPIFSLSKHHREKTSTA 54
           M VL + R    PL+ S  +  +P  F+P   H    Q+     P FSLS          
Sbjct: 1   MNVLALGRFLTSPLYKSSPLTPSPIQFTPIFLHPPKFQSLYSIHP-FSLS---------- 49

Query: 55  VMATCIDTSQ-ISQDPSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRSNID 113
            MATC+D S  +S+ P+ SQ+DDH++ Y K CRPSFSDRV C+P  +N++ A       D
Sbjct: 50  -MATCVDASTPLSRKPNGSQSDDHSFNYMKFCRPSFSDRVPCMPICKNRDTAFTRVEEFD 108

Query: 114 DGDD--------ADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIK 165
              +          VDLWLK+Q+EAR DV++EP+LSSYYF+SILSHKSLESALA HLS  
Sbjct: 109 TRVENHVEVDVVEGVDLWLKIQEEARLDVDQEPILSSYYFSSILSHKSLESALANHLSTN 168

Query: 166 LSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQ 225
           LSSLSL S TL++LFMGV  +D +II AVK DLIA+KERDPACISY HCLLNFKGFLACQ
Sbjct: 169 LSSLSLPSSTLYDLFMGVFADDNDIIGAVKDDLIAVKERDPACISYVHCLLNFKGFLACQ 228

Query: 226 AHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGD 285
           AHRIAH+LWLQGRKVLALLIQNRVS+VF+VDIHPGAKIGRG+L DHATG+VVGETAVIG+
Sbjct: 229 AHRIAHKLWLQGRKVLALLIQNRVSDVFAVDIHPGAKIGRGILLDHATGLVVGETAVIGN 288

Query: 286 NVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPP 345
           NVSILHNVTLGGTGK SGDRHPKIG+GVL+GAGTCILGNIKIGDGAKIGA SVVLK+VPP
Sbjct: 289 NVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGACSVVLKEVPP 348

Query: 346 RTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
           RTTAVGNPARL+GGK+NP  LDK+PSFTMDHTS    WSDYVI
Sbjct: 349 RTTAVGNPARLVGGKDNPIKLDKMPSFTMDHTS----WSDYVI 387

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|47779324|gb|AAT38561.1| mitochondrial serine acetyltransferase [Thlaspi goesingense]

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/376 (64%), Positives = 292/376 (77%), Gaps = 11/376 (2%)

Query: 23  SPHKHLL--SSQASSRTSPIFSLSKHHREKTSTAVMATCIDTSQI------SQDPSRSQN 74
           SPH H+L  SS   S  S   S  KH+R KT    MA CIDT +       S+D +RS +
Sbjct: 21  SPHTHVLYSSSFLPSFVSSRSSAPKHNR-KTLPPPMAACIDTCRTGKPQISSRDSTRSHD 79

Query: 75  DDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRSNIDDGD-DADVD-LWLKMQDEARS 132
           D+  +RY  + R  + DRVS  P N  Q + +HTR  ++D D DA++D +W K+++EA+S
Sbjct: 80  DESGFRYLNYYRTGYPDRVSRAPINGIQTRTLHTRPLVEDLDRDAEIDDVWEKIREEAKS 139

Query: 133 DVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIK 192
           D++ EP++S YY ASI+S +SLE+ALA  LS+KLS+L+L S TLF+LF GV+ E  EI++
Sbjct: 140 DIQREPIVSGYYHASIVSQRSLEAALANTLSVKLSNLNLPSNTLFDLFNGVLEEHPEIVE 199

Query: 193 AVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEV 252
            VK DLIA+KERDPACISY HC L+FKGFLACQAHRIAH LW Q RK+LALLIQNRVSE 
Sbjct: 200 CVKQDLIAVKERDPACISYVHCFLHFKGFLACQAHRIAHELWTQDRKILALLIQNRVSEA 259

Query: 253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNG 312
           F+VD HPGAKIG G+L DHAT +V+GETAV+G+NVSILHNVTLGGTGK  GDRHPKIG+G
Sbjct: 260 FAVDFHPGAKIGTGILLDHATAIVIGETAVVGNNVSILHNVTLGGTGKQCGDRHPKIGDG 319

Query: 313 VLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSF 372
           VL+GAGTCILGNI IG+GAKIGAGSVVLKDVPPRTTAVGNPARL+GGK+NP   DKIP  
Sbjct: 320 VLIGAGTCILGNITIGEGAKIGAGSVVLKDVPPRTTAVGNPARLLGGKDNPKKHDKIPGL 379

Query: 373 TMDHTSHIHEWSDYVI 388
           TMD TSHI EWSDYVI
Sbjct: 380 TMDQTSHISEWSDYVI 395

Source: Thlaspi goesingense

Species: Thlaspi goesingense

Genus: Thlaspi

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566537|ref|XP_003551487.1| PREDICTED: serine acetyltransferase 3, mitochondrial [Glycine max]

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/408 (66%), Positives = 318/408 (77%), Gaps = 37/408 (9%)

Query: 1   MKVLVVAR----PLFPSLYINNAPF-FSP-HKHLLSSQASSRTSPIFSLSKHHREKTSTA 54
           M VL + R    PL+ +  +  +P  F+P   H    Q+     P FSLS          
Sbjct: 1   MNVLALGRFLTSPLYKTSPLTPSPIQFTPIFLHPPKFQSLYSIHP-FSLS---------- 49

Query: 55  VMATCIDT-SQISQDPSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTR---- 109
            MATC+D  + +S+ P+ SQ+DD ++ Y K CRP+FSDRV C+P  +N++ A  TR    
Sbjct: 50  -MATCVDAPTPLSRKPNGSQSDDRSFNYMKFCRPTFSDRVPCIPICKNRDTAF-TRVEEF 107

Query: 110 -SNIDDGDDADV------DLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHL 162
            + ++D DD +V      DLWLK+Q+EAR DV++EP+LSSYYF+SILSHKSLESALA HL
Sbjct: 108 DTCVEDNDDIEVEVVEGVDLWLKIQEEARLDVDQEPILSSYYFSSILSHKSLESALANHL 167

Query: 163 SIKLSSLSLQSGTLFELFMGVIVEDQEIIK--AVKADLIAIKERDPACISYAHCLLNFKG 220
           S  LSSLSL S TLF+LFMGV+V+D +     AVK DLIA+KERDPACISY HCLLNFKG
Sbjct: 168 STNLSSLSLPSSTLFDLFMGVLVDDGDDDIVGAVKDDLIAVKERDPACISYVHCLLNFKG 227

Query: 221 FLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGET 280
           FLACQAHRIAH+LWLQGRKVLALLIQNRVSEVF+VDIHPGAKIGRG+L DHATG+VVGET
Sbjct: 228 FLACQAHRIAHKLWLQGRKVLALLIQNRVSEVFAVDIHPGAKIGRGILLDHATGLVVGET 287

Query: 281 AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVL 340
           AVIG+NVSILHNVTLGGTGK SGDRHPKIG+GVL+GAGTCILGNIKIGDGAKIGA SVVL
Sbjct: 288 AVIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGACSVVL 347

Query: 341 KDVPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
           K+VPPRTTAVGNPARL+GGK+NP  LDK+PSFTMDHTS    WSDYVI
Sbjct: 348 KEVPPRTTAVGNPARLVGGKDNPIKLDKMPSFTMDHTS----WSDYVI 391

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|39841350|gb|AAR31185.1| serine O-acetyltransferase 1 [Glycine max]

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/347 (74%), Positives = 295/347 (85%), Gaps = 19/347 (5%)

Query: 56  MATCIDT-SQISQDPSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTR----- 109
           MATC+D  + +S+ P+ SQ+DD ++ Y K CRP+FSDRV C+P  +N++ A  TR     
Sbjct: 26  MATCVDAPTPLSRKPNGSQSDDRSFNYMKFCRPTFSDRVPCIPICKNRDTAF-TRVEEFD 84

Query: 110 SNIDDGDDADV------DLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLS 163
           + ++D DD +V      DLWLK+Q+EAR DV++EP+LSSYYF+SILSHKSLESALA HLS
Sbjct: 85  TCVEDNDDIEVEVVEGVDLWLKIQEEARLDVDQEPILSSYYFSSILSHKSLESALANHLS 144

Query: 164 IKLSSLSLQSGTLFELFMGVIVEDQEIIK--AVKADLIAIKERDPACISYAHCLLNFKGF 221
             LSSLSL S TLFELFMGV+V+D +     AVK DLIA+KERDPACISY HCLLNFKGF
Sbjct: 145 TNLSSLSLPSSTLFELFMGVLVDDGDDDIVGAVKDDLIAVKERDPACISYVHCLLNFKGF 204

Query: 222 LACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETA 281
           LACQAHRIAH+LWLQGRKVLALLIQNRVSEVF+VDIHPGAKIGRG+L DHATG+VVGETA
Sbjct: 205 LACQAHRIAHKLWLQGRKVLALLIQNRVSEVFAVDIHPGAKIGRGILLDHATGLVVGETA 264

Query: 282 VIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK 341
           VIG+NVSILHNVTLGGTGK SGDRHPKIG+GVL+GAGTCILGNIKIGDGAKIGA SVVLK
Sbjct: 265 VIGNNVSILHNVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGACSVVLK 324

Query: 342 DVPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
           +VPPRTTAVGNPARL+GGK+NP  LDK+PSFTMDHTS    WSDYVI
Sbjct: 325 EVPPRTTAVGNPARLVGGKDNPIKLDKMPSFTMDHTS----WSDYVI 367

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|23343583|emb|CAC88763.1| serine acetyltransferase 4 [Nicotiana tabacum]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 234/329 (71%), Positives = 273/329 (82%), Gaps = 13/329 (3%)

Query: 62  TSQISQDPSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRSNIDDGDDADVD 121
           T+ +S+DP++ Q D+H Y Y K CRPSF + VSC P            S I   ++ D D
Sbjct: 7   TNPLSRDPNKPQIDNHVYNYVKFCRPSFPELVSCAPIPEKN-------SKIGRNEEED-D 58

Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFM 181
           LWLKM+DEARSD+++EP+LS+YY  SIL+H S+E ALA HLS+KLS+ SL S TL++LF+
Sbjct: 59  LWLKMKDEARSDIDQEPILSTYYITSILAHDSMERALANHLSMKLSNSSLPSSTLYDLFL 118

Query: 182 GVIVED--QEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRK 239
           GV+ ED  Q+IIKAV ADL A+KERDPACISY HC LNFKGFLACQAHRIAH+LW  GR+
Sbjct: 119 GVLTEDCSQDIIKAVIADLRAVKERDPACISYVHCFLNFKGFLACQAHRIAHKLWSNGRQ 178

Query: 240 VLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTG 299
           +LALLIQNRVSEVF+VDIHPGAKIG+G+L DHATGVVVGETAVIG+NVSILHNVTLGGTG
Sbjct: 179 ILALLIQNRVSEVFAVDIHPGAKIGKGILLDHATGVVVGETAVIGNNVSILHNVTLGGTG 238

Query: 300 KMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG 359
           K+SGDRHPKIG+GVL+GAGTC+LGN+ I DGAKIGAGSVVLK VP RTTAVGNPARL+GG
Sbjct: 239 KISGDRHPKIGDGVLIGAGTCVLGNVIIEDGAKIGAGSVVLKKVPARTTAVGNPARLLGG 298

Query: 360 KENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
           KENP  LDKIPS TMDHT   +EWSDYVI
Sbjct: 299 KENPKKLDKIPSLTMDHT---YEWSDYVI 324

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
TAIR|locus:2089974	391	SERAT2;2 "serine acetyltransfe	0.971	0.964	0.539	2e-102
TAIR|locus:2012085	314	SERAT2;1 "serine acetyltransfe	0.688	0.850	0.677	6.7e-100
TAIR|locus:2164996	312	SERAT1;1 "serine acetyltransfe	0.783	0.974	0.521	3.3e-79
TAIR|locus:2127978	355	SERAT3;2 "serine acetyltransfe	0.644	0.704	0.509	2e-65
TAIR|locus:2057254	323	ATSERAT3;1 [Arabidopsis thalia	0.644	0.773	0.478	3.4e-61
UNIPROTKB|P0A9D4	273	cysE "serine acetyltransferase	0.670	0.952	0.454	3.4e-54
UNIPROTKB|Q9KNT2	273	VC_2649 "Serine acetyltransfer	0.641	0.912	0.444	1.9e-51
TIGR_CMR|VC_2649	273	VC_2649 "serine acetyltransfer	0.641	0.912	0.444	1.9e-51
TIGR_CMR|SPO_2247	270	SPO_2247 "serine O-acetyltrans	0.623	0.896	0.446	4e-51
POMBASE|SPAC1039.08	270	SPAC1039.08 "serine acetyltran	0.610	0.877	0.378	4.8e-39

TAIR|locus:2089974 SERAT2;2 "serine acetyltransferase 2;2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
 Identities = 213/395 (53%), Positives = 264/395 (66%)

Query:     5 VVARPLFP-SLYI--NNAPFFSPHKHLLSSQASSRTSPIFSLSKHHREKTSTAVMATCID 61
             V +R  F  SLY+  +++P  + H  LL S  SS+     +LS           MA CID
Sbjct:     4 VTSRRHFTMSLYMLRSSSPHINHHSFLLPSFVSSKFKH-HTLSPPPSPPPPPP-MAACID 61

Query:    62 TS-----QIS-QDPSRSQNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRSNIXXX 115
             T      QIS +D S+  +D+  +RY  + R  + DR S   FN  Q + +HTR  +   
Sbjct:    62 TCRTGKPQISPRDSSKHHDDESGFRYMNYFR--YPDRSS---FNGTQTKTLHTRPLLEDL 116

Query:   116 XXXXXX--LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQS 173
                     +W K+++EA+SD+ +EP++S+YY ASI+S +SLE                 S
Sbjct:   117 DRDAEVDDVWAKIREEAKSDIAKEPIVSAYYHASIVSQRSLEAALANTLSVKLSNLNLPS 176

Query:   174 GTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRL 233
              TLF+LF GV+  + +I+++VK DL+A+KERDPACISY HC L+FKGFLACQAHRIAH L
Sbjct:   177 NTLFDLFSGVLQGNPDIVESVKLDLLAVKERDPACISYVHCFLHFKGFLACQAHRIAHEL 236

Query:   234 WLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNV 293
             W Q RK+LALLIQNRVSE F+VD HPGAKIG G+L DHAT +V+GETAV+G+NVSILHNV
Sbjct:   237 WTQDRKILALLIQNRVSEAFAVDFHPGAKIGTGILLDHATAIVIGETAVVGNNVSILHNV 296

Query:   294 TLGGTGKMSGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNP 353
             TLGGTGK  GDRHPKIG+GVL+GAGTCIL              SVVLKDVPPRTTAVGNP
Sbjct:   297 TLGGTGKQCGDRHPKIGDGVLIGAGTCILGNITIGEGAKIGAGSVVLKDVPPRTTAVGNP 356

Query:   354 ARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
             ARL+GGK+NP   DKIP  TMD TSHI EWSDYVI
Sbjct:   357 ARLLGGKDNPKTHDKIPGLTMDQTSHISEWSDYVI 391

GO:0005737 "cytoplasm" evidence=IEA

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0009001 "serine O-acetyltransferase activity" evidence=IEA;IGI;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0016740 "transferase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0019344 "cysteine biosynthetic process" evidence=RCA;IMP

GO:0005739 "mitochondrion" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2012085 SERAT2;1 "serine acetyltransferase 2;1" [Arabidopsis thaliana (taxid:3702)]

 Score = 958 (342.3 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
 Identities = 181/267 (67%), Positives = 209/267 (78%)

Query:   122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
             +W+KM +EA+SDV++EP+LS+YY+ASI SH+SLE                 S TLFELF+
Sbjct:    48 VWIKMLEEAKSDVKQEPILSNYYYASITSHRSLESALAHILSVKLSNLNLPSNTLFELFI 107

Query:   182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
              V+ E  EII++ K DLIA+KERDPACISY HC L FKGFLACQAHRIAH LW Q RK++
Sbjct:   108 SVLEESPEIIESTKQDLIAVKERDPACISYVHCFLGFKGFLACQAHRIAHTLWKQNRKIV 167

Query:   242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
             ALLIQNRVSE F+VDIHPGAKIG+G+L DHATGVV+GETAV+GDNVSILH VTLGGTGK 
Sbjct:   168 ALLIQNRVSESFAVDIHPGAKIGKGILLDHATGVVIGETAVVGDNVSILHGVTLGGTGKQ 227

Query:   302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLIGGKE 361
             SGDRHPKIG+GVL+GAG+CIL              SVV+KDVP RTTAVGNPARLIGGKE
Sbjct:   228 SGDRHPKIGDGVLIGAGSCILGNITIGEGAKIGSGSVVVKDVPARTTAVGNPARLIGGKE 287

Query:   362 NPFMLDKIPSFTMDHTSHIHEWSDYVI 388
             NP   DKIP  TMD TS++ EWSDYVI
Sbjct:   288 NPRKHDKIPCLTMDQTSYLTEWSDYVI 314

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0009001 "serine O-acetyltransferase activity" evidence=IEA;IGI;IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0005829 "cytosol" evidence=TAS

GO:0009970 "cellular response to sulfate starvation" evidence=IEP

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2164996 SERAT1;1 "serine acetyltransferase 1;1" [Arabidopsis thaliana (taxid:3702)]

 Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
 Identities = 160/307 (52%), Positives = 202/307 (65%)

Query:    83 KHCRPSFSDRVSCVPFNRNQEQAIHTRSNIXXXXXXXXXLWLKMQDEARSDVEEEPVLSS 142
             +H  PS  +++S V    ++ +A     +          LW +++ EAR D E EP L+S
Sbjct:     8 RHQSPS-KEKLSSVT-QSDEAEAASAAISAAAADAEAAGLWTQIKAEARRDAEAEPALAS 65

Query:   143 YYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFMGVIVEDQEIIKAVKADLIAIK 202
             Y +++ILSH SLE                 S  L++LF+     D  +  A  ADL A +
Sbjct:    66 YLYSTILSHSSLERSISFHLGNKLCSSTLLSTLLYDLFLNTFSSDPSLRNATVADLRAAR 125

Query:   203 ERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAK 262
              RDPACIS++HCLLN+KGFLA QAHR++H+LW Q RK LAL + +R+S+VF+VDIHP AK
Sbjct:   126 VRDPACISFSHCLLNYKGFLAIQAHRVSHKLWTQSRKPLALALHSRISDVFAVDIHPAAK 185

Query:   263 IGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCIL 322
             IG+G+L DHATGVVVGETAVIG+NVSILH+VTLGGTGK  GDRHPKIG+G L+GAG  IL
Sbjct:   186 IGKGILLDHATGVVVGETAVIGNNVSILHHVTLGGTGKACGDRHPKIGDGCLIGAGATIL 245

Query:   323 XXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLIGGKENPFMLDK-IPSFTMDHTSHIH 381
                           SVVL DVP R TAVGNPARL+GGKE P + D+  P  +MDHTS I 
Sbjct:   246 GNVKIGAGAKVGAGSVVLIDVPCRGTAVGNPARLVGGKEKPTIHDEECPGESMDHTSFIS 305

Query:   382 EWSDYVI 388
             EWSDY+I
Sbjct:   306 EWSDYII 312

GO:0005737 "cytoplasm" evidence=ISM

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0009001 "serine O-acetyltransferase activity" evidence=IEA;IGI

GO:0016740 "transferase activity" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2127978 SERAT3;2 "serine acetyltransferase 3;2" [Arabidopsis thaliana (taxid:3702)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 130/255 (50%), Positives = 174/255 (68%)

Query:   122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
             +W  +++EA+ + EEEPVLSS+ +ASILSH  LE                 +  L ++F 
Sbjct:    73 IWDSIREEAKLEAEEEPVLSSFLYASILSHDCLEQALSFVLANRLQNPTLLATQLMDIFC 132

Query:   182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
              V+V D+ I  +++ D+ A K+RDPAC+SY+  +L+ KG+LA QA+R+AH+LW QGRK+L
Sbjct:   133 NVMVHDRGIQSSIRLDVQAFKDRDPACLSYSSAILHLKGYLALQAYRVAHKLWKQGRKLL 192

Query:   242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
             AL +Q+RVSEVF +DIHP A+IG+G+L DH TGVV+GETAVIGD VSILH VTLGGTGK 
Sbjct:   193 ALALQSRVSEVFGIDIHPAARIGKGILLDHGTGVVIGETAVIGDRVSILHGVTLGGTGKE 252

Query:   302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLIGGKE 361
             +GDRHP IG+G L+GA   IL              S+VLKDVP  +   GNPA+LIG   
Sbjct:   253 TGDRHPNIGDGALLGACVTILGNIKIGAGAMVAAGSLVLKDVPSHSMVAGNPAKLIG--- 309

Query:   362 NPFMLDKIPSFTMDH 376
               F+ ++ PS TM+H
Sbjct:   310 --FVDEQDPSMTMEH 322

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0009001 "serine O-acetyltransferase activity" evidence=IEA;IGI;IDA

GO:0016407 "acetyltransferase activity" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0000103 "sulfate assimilation" evidence=TAS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2057254 ATSERAT3;1 [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 122/255 (47%), Positives = 168/255 (65%)

Query:   122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
             +W  +++EA+ + E+EP+LSS+ +A IL+H  LE                 +  L ++F 
Sbjct:    36 IWDAIREEAKLEAEKEPILSSFLYAGILAHDCLEQALGFVLANRLQNPTLLATQLLDIFY 95

Query:   182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
             GV++ D+ I  +++ DL A K+RDPAC+SY+  +L+ KG+ A QA+R+AH+LW +GRK+L
Sbjct:    96 GVMMHDKGIQSSIRHDLQAFKDRDPACLSYSSAILHLKGYHALQAYRVAHKLWNEGRKLL 155

Query:   242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
             AL +Q+R+SEVF +DIHP A+IG G+L DH TGVV+GETAVIG+ VSILH VTLGGTGK 
Sbjct:   156 ALALQSRISEVFGIDIHPAARIGEGILLDHGTGVVIGETAVIGNGVSILHGVTLGGTGKE 215

Query:   302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLIGGKE 361
             +GDRHPKIG G L+GA   IL              S+VLKDVP  +   GNPA+LI   E
Sbjct:   216 TGDRHPKIGEGALLGACVTILGNISIGAGAMVAAGSLVLKDVPSHSVVAGNPAKLIRVME 275

Query:   362 NPFMLDKIPSFTMDH 376
                  ++ PS  M H
Sbjct:   276 -----EQDPSLAMKH 285

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0009001 "serine O-acetyltransferase activity" evidence=IEA;IGI;ISS;IDA

GO:0016407 "acetyltransferase activity" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0000103 "sulfate assimilation" evidence=TAS

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|P0A9D4 cysE "serine acetyltransferase monomer" [Escherichia coli K-12 (taxid:83333)]

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 121/266 (45%), Positives = 163/266 (61%)

Query:   122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
             +W  ++ EAR+  + EP+L+S+Y A++L H++L                  +  + E+  
Sbjct:     9 VWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPAIAIREVVE 68

Query:   182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                  D E+I +   D+ A++ RDPA   Y+  LL  KGF A QA+RI H LW QGR+ L
Sbjct:    69 EAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRAL 128

Query:   242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
             A+ +QN+VS  F VDIHP AKIGRG++ DHATG+VVGETAVI ++VSIL +VTLGGTGK 
Sbjct:   129 AIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKS 188

Query:   302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLIGGKE 361
              GDRHPKI  GV++GAG  IL              SVVL+ VPP TTA G PAR++G  +
Sbjct:   189 GGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPD 248

Query:   362 NPFMLDKIPSFTMD-HTSHIHEWSDY 386
             +    DK PS  MD H + I+   +Y
Sbjct:   249 S----DK-PSMDMDQHFNGINHTFEY 269

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA;IDA

GO:0009001 "serine O-acetyltransferase activity" evidence=IEA;IDA

GO:0009333 "cysteine synthase complex" evidence=IDA

UNIPROTKB|Q9KNT2 VC_2649 "Serine acetyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 113/254 (44%), Positives = 149/254 (58%)

Query:   122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
             +W  +  EAR   E+EP+L+S+Y A+I+ H SL+                 +  + E+  
Sbjct:     9 VWQTIVAEAREQAEQEPMLASFYHATIIKHDSLKAALSYILANRLNTASMPAMAVREVIE 68

Query:   182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                  D  I +A   D+ A   RDPA   Y+  LL  KG+ A Q +R+A+ LW QGRK L
Sbjct:    69 EAFAADPSISEAAACDICATVNRDPAVSMYSMPLLYLKGYHALQGYRVANWLWRQGRKAL 128

Query:   242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
             A   QN++S    VDIHP A+IGRG++ DHATG+V+GETAV+ D+VSIL +VTLGGTGK 
Sbjct:   129 ATYFQNQISVACQVDIHPAARIGRGIMLDHATGIVIGETAVVEDDVSILQDVTLGGTGKE 188

Query:   302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLIGGKE 361
              GDRHPKI  GV++GAG  IL              SVVL+ VPP TT  G PAR++G  +
Sbjct:   189 CGDRHPKIREGVMIGAGAKILGNIEVGEGAKIGSGSVVLQAVPPHTTVAGVPARIVGRPQ 248

Query:   362 NPFMLDKIPSFTMD 375
             +    DK PS  MD
Sbjct:   249 S----DK-PSLDMD 257

GO:0006535 "cysteine biosynthetic process from serine" evidence=ISS

GO:0009001 "serine O-acetyltransferase activity" evidence=ISS

TIGR_CMR|VC_2649 VC_2649 "serine acetyltransferase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 113/254 (44%), Positives = 149/254 (58%)

Query:   122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
             +W  +  EAR   E+EP+L+S+Y A+I+ H SL+                 +  + E+  
Sbjct:     9 VWQTIVAEAREQAEQEPMLASFYHATIIKHDSLKAALSYILANRLNTASMPAMAVREVIE 68

Query:   182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                  D  I +A   D+ A   RDPA   Y+  LL  KG+ A Q +R+A+ LW QGRK L
Sbjct:    69 EAFAADPSISEAAACDICATVNRDPAVSMYSMPLLYLKGYHALQGYRVANWLWRQGRKAL 128

Query:   242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
             A   QN++S    VDIHP A+IGRG++ DHATG+V+GETAV+ D+VSIL +VTLGGTGK 
Sbjct:   129 ATYFQNQISVACQVDIHPAARIGRGIMLDHATGIVIGETAVVEDDVSILQDVTLGGTGKE 188

Query:   302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLIGGKE 361
              GDRHPKI  GV++GAG  IL              SVVL+ VPP TT  G PAR++G  +
Sbjct:   189 CGDRHPKIREGVMIGAGAKILGNIEVGEGAKIGSGSVVLQAVPPHTTVAGVPARIVGRPQ 248

Query:   362 NPFMLDKIPSFTMD 375
             +    DK PS  MD
Sbjct:   249 S----DK-PSLDMD 257

GO:0006535 "cysteine biosynthetic process from serine" evidence=ISS

GO:0009001 "serine O-acetyltransferase activity" evidence=ISS

TIGR_CMR|SPO_2247 SPO_2247 "serine O-acetyltransferase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 109/244 (44%), Positives = 147/244 (60%)

Query:   122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
             +W ++  EA+  V+ EP++     A IL HK+L+                    L E+  
Sbjct:    14 VWDRITAEAQDAVDREPLMGGLVHACILHHKNLDRALSYRISAKLCSNEMSMMVLREIVD 73

Query:   182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                    E+I+A +ADL+A+ ERDPAC      +L FKG+ A QA+R+AH LW + R  L
Sbjct:    74 DAYDSAPELIEAARADLMAVYERDPACHRLLQPILYFKGYQAMQAYRVAHWLWTRKRYDL 133

Query:   242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
             A   Q RVSE+F VDIHP A+IG+G++ DHA  +V+GETAV+GDNVS+LH+VTLGGTGK 
Sbjct:   134 AYFFQMRVSEIFGVDIHPAARIGKGIMIDHAHSIVIGETAVVGDNVSMLHSVTLGGTGKE 193

Query:   302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLIG--G 359
               DRHPKIG+GVL+GAG  +L              SVVL +VPP  T  G PA+++G  G
Sbjct:   194 EEDRHPKIGDGVLIGAGAKVLGNIKVGHCSRIAAGSVVLSEVPPCKTVAGIPAKIVGEAG 253

Query:   360 KENP 363
              + P
Sbjct:   254 CDQP 257

GO:0006535 "cysteine biosynthetic process from serine" evidence=ISS

GO:0009001 "serine O-acetyltransferase activity" evidence=ISS

POMBASE|SPAC1039.08 SPAC1039.08 "serine acetyltransferase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 90/238 (37%), Positives = 126/238 (52%)

Query:   122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
             +W K++ EA    E  P L+      ILS K+L                  S ++   F 
Sbjct:    16 IWPKLRKEAEKQCEVNPWLAKDLARKILSKKTLRESLSCVLALPLDHVTGSSESMENWFY 75

Query:   182 GVI-VEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKV 240
              ++ + D++II++   DL  +   +PAC       L+F+GF A Q +RIAH LW +G K 
Sbjct:    76 SILGLNDEKIIRSAMIDLDRLYTTNPACPDLISAFLSFRGFHALQLYRIAHGLWSEGDKT 135

Query:   241 LALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGK 300
              A+L+QN  +  + VDIHP A IG GL  DHA G+V+GETA++ D VSI HNVTLG T K
Sbjct:   136 SAVLVQNWTAVAYGVDIHPAASIGDGLFLDHALGIVIGETAIVEDGVSIWHNVTLGSTFK 195

Query:   301 MSGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLIG 358
              SG RHP I    ++  G  +L              ++V KDV P   A+G+PAR +G
Sbjct:   196 DSGARHPVIRKNAMLCTGATVLGRVEVGENAVVAAGALVTKDVAPNRLALGSPARDVG 253

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006535 "cysteine biosynthetic process from serine" evidence=ISS

GO:0009001 "serine O-acetyltransferase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P29847	CYSE_SALTY	2, ., 3, ., 1, ., 3, 0	0.5300	0.6701	0.9523	yes	no
P43886	CYSE_HAEIN	2, ., 3, ., 1, ., 3, 0	0.5042	0.6134	0.8913	yes	no
Q8W0E4	SAT1_ORYSJ	2, ., 3, ., 1, ., 3, 0	0.6190	0.6907	0.8844	yes	no
P0A9D5	CYSE_ECOL6	2, ., 3, ., 1, ., 3, 0	0.5223	0.6675	0.9487	yes	no
P0A9D7	CYSE_SHIFL	2, ., 3, ., 1, ., 3, 0	0.5223	0.6675	0.9487	yes	no
Q39218	SAT3_ARATH	2, ., 3, ., 1, ., 3, 0	0.6112	0.9381	0.9309	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1	0.976
3rd Layer	2.3.1.30	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	388
PLN02357	360	PLN02357, PLN02357, serine acetyltransferase	0.0
PLN02694	294	PLN02694, PLN02694, serine O-acetyltransferase	1e-136
PRK11132	273	PRK11132, cysE, serine acetyltransferase; Provisio	1e-107
PLN02739	355	PLN02739, PLN02739, serine acetyltransferase	1e-103
COG1045	194	COG1045, CysE, Serine acetyltransferase [Amino aci	2e-88
TIGR01172	162	TIGR01172, cysE, serine O-acetyltransferase	3e-87
cd03354	101	cd03354, LbH_SAT, Serine acetyltransferase (SAT):	6e-57
pfam06426	105	pfam06426, SATase_N, Serine acetyltransferase, N-t	4e-47
smart00971	105	smart00971, SATase_N, Serine acetyltransferase, N-	5e-41
TIGR03570	193	TIGR03570, NeuD_NnaD, sugar O-acyltransferase, sia	3e-25
cd03360	197	cd03360, LbH_AT_putative, Putative Acyltransferase	4e-23
cd04647	109	cd04647, LbH_MAT_like, Maltose O-acyltransferase (	1e-22
cd03358	119	cd03358, LbH_WxcM_N_like, WcxM-like, Left-handed p	2e-22
COG0110	190	COG0110, WbbJ, Acetyltransferase (isoleucine patch	1e-20
PRK10191	146	PRK10191, PRK10191, putative acyl transferase; Pro	1e-20
TIGR04016	146	TIGR04016, WcaB, colanic acid biosynthesis acetylt	1e-19
cd03357	169	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase	2e-19
cd00208	78	cd00208, LbetaH, Left-handed parallel beta-Helix (	4e-18
cd03349	145	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT)	4e-17
TIGR03532	231	TIGR03532, DapD_Ac, 2,3,4,5-tetrahydropyridine-2,6	1e-14
cd04645	153	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydra	3e-14
PRK09527	203	PRK09527, lacA, galactoside O-acetyltransferase; R	5e-14
cd03351	254	cd03351, LbH_UDP-GlcNAc_AT, UDP-N-acetylglucosamin	1e-13
PRK05289	262	PRK05289, PRK05289, UDP-N-acetylglucosamine acyltr	4e-13
cd03352	205	cd03352, LbH_LpxD, UDP-3-O-acyl-glucosamine N-acyl	5e-13
COG0663	176	COG0663, PaaY, Carbonic anhydrases/acetyltransfera	2e-12
COG1044	338	COG1044, LpxD, UDP-3-O-[3-hydroxymyristoyl]	2e-12
PRK10502	182	PRK10502, PRK10502, putative acyl transferase; Pro	2e-12
COG1043	260	COG1043, LpxA, Acyl-[acyl carrier protein]	5e-12
TIGR03308	204	TIGR03308, phn_thr-fam, phosphonate metabolim prot	1e-11
TIGR01853	324	TIGR01853, lipid_A_lpxD, UDP-3-O-[3-hydroxymyristo	1e-11
TIGR01852	254	TIGR01852, lipid_A_lpxA, acyl-[acyl-carrier-protei	1e-11
cd05825	107	cd05825, LbH_wcaF_like, wcaF-like: This group is c	2e-11
cd04650	154	cd04650, LbH_FBP, Ferripyochelin Binding Protein (	2e-10
cd03353	193	cd03353, LbH_GlmU_C, N-acetyl-glucosamine-1-phosph	7e-10
cd03352	205	cd03352, LbH_LpxD, UDP-3-O-acyl-glucosamine N-acyl	1e-09
COG2171	271	COG2171, DapD, Tetrahydrodipicolinate N-succinyltr	2e-09
PRK00892	343	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] gluco	2e-09
PRK09677	192	PRK09677, PRK09677, putative lipopolysaccharide bi	2e-09
PRK00892	343	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] gluco	3e-09
PRK14352	482	PRK14352, glmU, bifunctional N-acetylglucosamine-1	9e-09
PRK10092	183	PRK10092, PRK10092, maltose O-acetyltransferase; P	3e-08
pfam00132	36	pfam00132, Hexapep, Bacterial transferase hexapept	8e-08
cd03352	205	cd03352, LbH_LpxD, UDP-3-O-acyl-glucosamine N-acyl	1e-07
PRK14353	446	PRK14353, glmU, bifunctional N-acetylglucosamine-1	1e-07
PRK00892	343	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] gluco	3e-07
PRK14357	448	PRK14357, glmU, bifunctional N-acetylglucosamine-1	3e-07
TIGR01173	451	TIGR01173, glmU, UDP-N-acetylglucosamine diphospho	5e-07
TIGR02353	695	TIGR02353, NRPS_term_dom, non-ribosomal peptide sy	5e-07
COG1044	338	COG1044, LpxD, UDP-3-O-[3-hydroxymyristoyl]	7e-07
cd03352	205	cd03352, LbH_LpxD, UDP-3-O-acyl-glucosamine N-acyl	8e-07
COG1207	460	COG1207, GlmU, N-acetylglucosamine-1-phosphate uri	8e-07
cd03350	139	cd03350, LbH_THP_succinylT, 2,3,4,5-tetrahydropyri	9e-07
PRK14354	458	PRK14354, glmU, bifunctional N-acetylglucosamine-1	1e-06
COG1044	338	COG1044, LpxD, UDP-3-O-[3-hydroxymyristoyl]	2e-06
PRK05289	262	PRK05289, PRK05289, UDP-N-acetylglucosamine acyltr	3e-06
PRK14356	456	PRK14356, glmU, bifunctional N-acetylglucosamine-1	6e-06
COG1208	358	COG1208, GCD1, Nucleoside-diphosphate-sugar pyroph	8e-06
TIGR01853	324	TIGR01853, lipid_A_lpxD, UDP-3-O-[3-hydroxymyristo	9e-06
cd03352	205	cd03352, LbH_LpxD, UDP-3-O-acyl-glucosamine N-acyl	1e-05
COG1044	338	COG1044, LpxD, UDP-3-O-[3-hydroxymyristoyl]	1e-05
COG1044	338	COG1044, LpxD, UDP-3-O-[3-hydroxymyristoyl]	1e-05
PRK12461	255	PRK12461, PRK12461, UDP-N-acetylglucosamine acyltr	1e-05
cd03351	254	cd03351, LbH_UDP-GlcNAc_AT, UDP-N-acetylglucosamin	2e-05
PRK09451	456	PRK09451, glmU, bifunctional N-acetylglucosamine-1	2e-05
COG1043	260	COG1043, LpxA, Acyl-[acyl carrier protein]	4e-05
cd03353	193	cd03353, LbH_GlmU_C, N-acetyl-glucosamine-1-phosph	4e-05
TIGR01853	324	TIGR01853, lipid_A_lpxD, UDP-3-O-[3-hydroxymyristo	6e-05
TIGR02353	695	TIGR02353, NRPS_term_dom, non-ribosomal peptide sy	9e-05
TIGR01853	324	TIGR01853, lipid_A_lpxD, UDP-3-O-[3-hydroxymyristo	2e-04
TIGR01852	254	TIGR01852, lipid_A_lpxA, acyl-[acyl-carrier-protei	4e-04
TIGR04008	180	TIGR04008, WcaF, colanic acid biosynthesis acetylt	5e-04
PRK14360	450	PRK14360, glmU, bifunctional N-acetylglucosamine-1	6e-04
PRK14360	450	PRK14360, glmU, bifunctional N-acetylglucosamine-1	7e-04
PRK11830	272	PRK11830, dapD, 2,3,4,5-tetrahydropyridine-2,6-car	0.001
cd03359	161	cd03359, LbH_Dynactin_5, Dynactin 5 (or subunit p2	0.001
pfam00132	36	pfam00132, Hexapep, Bacterial transferase hexapept	0.002
TIGR01173	451	TIGR01173, glmU, UDP-N-acetylglucosamine diphospho	0.002
PRK14358	481	PRK14358, glmU, bifunctional N-acetylglucosamine-1	0.002
PRK14355	459	PRK14355, glmU, bifunctional N-acetylglucosamine-1	0.002
PRK14355	459	PRK14355, glmU, bifunctional N-acetylglucosamine-1	0.002
cd04745	155	cd04745, LbH_paaY_like, paaY-like: This group is c	0.002
PRK12461	255	PRK12461, PRK12461, UDP-N-acetylglucosamine acyltr	0.003
cd03356	79	cd03356, LbH_G1P_AT_C_like, Left-handed parallel b	0.003
PLN02296	269	PLN02296, PLN02296, carbonate dehydratase	0.003
COG1207	460	COG1207, GlmU, N-acetylglucosamine-1-phosphate uri	0.004
PRK09451	456	PRK09451, glmU, bifunctional N-acetylglucosamine-1	0.004

>gnl|CDD|215205 PLN02357, PLN02357, serine acetyltransferase

 Score =  589 bits (1521), Expect = 0.0
 Identities = 259/376 (68%), Positives = 293/376 (77%), Gaps = 24/376 (6%)

Query: 18  NAPFFSPHKHLLSSQASSRTSPIFSLSKHHREKTSTAVMATCIDT-----SQISQDPSRS 72
           ++P  S H  LL     S TS  FSL K          MA CIDT     SQ+S      
Sbjct: 4   SSPHISLHSFLLPP--FSCTST-FSLPKSR-------PMAACIDTCRTGTSQLSPK--HH 51

Query: 73  QNDDHAYRYAKHCRPSFSDRVSCVPFNRNQEQAIHTRSNIDDGDDADVDLWLKMQDEARS 132
            +D H Y     CRPSFS       F+ N  + IHTR   DD D  D D+WLK+Q+EA+S
Sbjct: 52  DDDSHFYYIKNFCRPSFSP------FSGNHTKTIHTRPVEDDLDRDD-DVWLKIQEEAKS 104

Query: 133 DVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIK 192
           DVE+EP+LSSYY+ASILSH+SLESALA HLS+KLS+L+L S TLF+LF+GV+ E  EII+
Sbjct: 105 DVEQEPILSSYYYASILSHRSLESALANHLSVKLSNLNLPSNTLFDLFIGVLEESPEIIE 164

Query: 193 AVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEV 252
           +VK DL A+KERDPACISY HC LNFKGFLACQAHRIAH+LW QGRK+LALLIQNRVSE 
Sbjct: 165 SVKQDLRAVKERDPACISYVHCFLNFKGFLACQAHRIAHKLWTQGRKILALLIQNRVSEA 224

Query: 253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNG 312
           F+VDIHPGAKIG+G+L DHATGVV+GETAV+G+NVSILHNVTLGGTGK SGDRHPKIG+G
Sbjct: 225 FAVDIHPGAKIGQGILLDHATGVVIGETAVVGNNVSILHNVTLGGTGKQSGDRHPKIGDG 284

Query: 313 VLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSF 372
           VL+GAGTCILGNI IG+GAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENP   DKIPS 
Sbjct: 285 VLIGAGTCILGNITIGEGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPIKHDKIPSL 344

Query: 373 TMDHTSHIHEWSDYVI 388
           TMD TSHI EWSDYVI
Sbjct: 345 TMDQTSHISEWSDYVI 360

Length = 360

>gnl|CDD|178297 PLN02694, PLN02694, serine O-acetyltransferase

 Score =  390 bits (1004), Expect = e-136
 Identities = 177/282 (62%), Positives = 220/282 (78%), Gaps = 3/282 (1%)

Query: 110 SNIDDGDDADVD---LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKL 166
              +    AD +   LW +++ EAR D E EP L+SY +++ILSH SLE +L+ HL  KL
Sbjct: 13  PKTNSATTADEEAAWLWTQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKL 72

Query: 167 SSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQA 226
            S +L S  L++LF+     D  +  A  ADL A + RDPAC+S++HCLLN+KGFLACQA
Sbjct: 73  CSSTLLSTLLYDLFLNTFSSDPSLRAATVADLRAARVRDPACVSFSHCLLNYKGFLACQA 132

Query: 227 HRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDN 286
           HR+AH+LW Q R+ LAL + +R+S+VF+VDIHP AKIG+G+LFDHATGVV+GETAVIG+N
Sbjct: 133 HRVAHKLWTQSRRPLALALHSRISDVFAVDIHPAAKIGKGILFDHATGVVIGETAVIGNN 192

Query: 287 VSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPR 346
           VSILH+VTLGGTGK  GDRHPKIG+GVL+GAG  ILGN+KIG+GAKIGAGSVVL DVPPR
Sbjct: 193 VSILHHVTLGGTGKACGDRHPKIGDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPR 252

Query: 347 TTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI 388
           TTAVGNPARL+GGKE P   ++ P  +MDHTS I EWSDY+I
Sbjct: 253 TTAVGNPARLVGGKEKPAKHEECPGESMDHTSFISEWSDYII 294

Length = 294

>gnl|CDD|182987 PRK11132, cysE, serine acetyltransferase; Provisional

 Score =  315 bits (810), Expect = e-107
 Identities = 136/254 (53%), Positives = 182/254 (71%), Gaps = 5/254 (1%)

Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFM 181
           +W  ++ EAR+  + EP+L+S+Y A++L H++L SAL+  L+ KL+S  + +  + E+  
Sbjct: 9   VWNNIKAEARALADCEPMLASFYHATLLKHENLGSALSYMLANKLASPIMPAIAIREVVE 68

Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                D E+I +   D+ A++ RDPA   Y+  LL  KGF A QA+RI H LW QGR+ L
Sbjct: 69  EAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRAL 128

Query: 242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
           A+ +QN++S  F VDIHP AKIGRG++ DHATG+V+GETAVI ++VSIL +VTLGGTGK 
Sbjct: 129 AIYLQNQISVAFQVDIHPAAKIGRGIMLDHATGIVIGETAVIENDVSILQSVTLGGTGKT 188

Query: 302 SGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE 361
           SGDRHPKI  GV++GAG  ILGNI++G GAKIGAGSVVL+ VPP TTA G PAR++G  E
Sbjct: 189 SGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPE 248

Query: 362 NPFMLDKIPSFTMD 375
           +    DK PS  MD
Sbjct: 249 S----DK-PSMDMD 257

Length = 273

>gnl|CDD|215394 PLN02739, PLN02739, serine acetyltransferase

 Score =  309 bits (793), Expect = e-103
 Identities = 146/268 (54%), Positives = 200/268 (74%), Gaps = 6/268 (2%)

Query: 110 SNIDDGDDADVD-LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSS 168
             + D  ++  D +W  +++EA+ + EEEPVLSS+ +ASILSH  LE AL+  L+ +L +
Sbjct: 60  PVLLDFTNSRYDPIWDSIREEAKLEAEEEPVLSSFLYASILSHDCLEQALSFVLANRLQN 119

Query: 169 LSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHR 228
            +L +  L ++F  V+V D+ I  +++ D+ A K+RDPAC+SY+  +L+ KG+LA QA+R
Sbjct: 120 PTLLATQLMDIFCNVMVHDRGIQSSIRLDVQAFKDRDPACLSYSSAILHLKGYLALQAYR 179

Query: 229 IAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVS 288
           +AH+LW QGRK+LAL +Q+RVSEVF +DIHP A+IG+G+L DH TGVV+GETAVIGD VS
Sbjct: 180 VAHKLWKQGRKLLALALQSRVSEVFGIDIHPAARIGKGILLDHGTGVVIGETAVIGDRVS 239

Query: 289 ILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTT 348
           ILH VTLGGTGK +GDRHPKIG+G L+GA   ILGNI IG GA + AGS+VLKDVP  + 
Sbjct: 240 ILHGVTLGGTGKETGDRHPKIGDGALLGACVTILGNISIGAGAMVAAGSLVLKDVPSHSM 299

Query: 349 AVGNPARLIGGKENPFMLDKIPSFTMDH 376
             GNPA+LIG     F+ ++ PS TM++
Sbjct: 300 VAGNPAKLIG-----FVDEQDPSLTMEY 322

Length = 355

>gnl|CDD|223975 COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism]

 Score =  264 bits (678), Expect = 2e-88
 Identities = 109/176 (61%), Positives = 133/176 (75%)

Query: 188 QEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQN 247
           +E++ + + D+ A++ERDPA  SY   LL + GF A  AHR+AH LW +GRK+LA L+ +
Sbjct: 1   EEMLGSAREDIRAVRERDPAARSYLEVLLYYPGFHALWAHRLAHWLWNRGRKLLARLLSS 60

Query: 248 RVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP 307
               +F ++IHPGAKIGRGL  DH TGVV+GETAVIGD+V+I H VTLGGTGK SG RHP
Sbjct: 61  LSRFLFGIEIHPGAKIGRGLFIDHGTGVVIGETAVIGDDVTIYHGVTLGGTGKESGKRHP 120

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENP 363
            IGNGV +GAG  ILGNI+IGD AKIGAGSVVLKDVPP  T VG PAR+IG   + 
Sbjct: 121 TIGNGVYIGAGAKILGNIEIGDNAKIGAGSVVLKDVPPNATVVGVPARVIGRPGSK 176

Length = 194

>gnl|CDD|200082 TIGR01172, cysE, serine O-acetyltransferase

 Score =  261 bits (668), Expect = 3e-87
 Identities = 98/162 (60%), Positives = 120/162 (74%)

Query: 194 VKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVF 253
           ++ D+ A++ERDPA  SY   LL + GF A  A+R AH LW +G K LA L+ N +  + 
Sbjct: 1   IREDIRAVRERDPAARSYLEVLLYYPGFHALWAYRFAHFLWKRGFKFLARLLSNFIRVLT 60

Query: 254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGV 313
            VDIHPGA+IGRG+  DH TGVV+GETAVIGD+V+I H VTLGGTGK  G RHP IG GV
Sbjct: 61  GVDIHPGARIGRGVFIDHGTGVVIGETAVIGDDVTIYHGVTLGGTGKEKGKRHPTIGEGV 120

Query: 314 LVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAR 355
           ++GAG  +LGNI++G+ AKIGA SVVLKDVPP  T VG PAR
Sbjct: 121 MIGAGAKVLGNIEVGENAKIGANSVVLKDVPPGATVVGVPAR 162

Cysteine biosynthesis [Amino acid biosynthesis, Serine family]. Length = 162

>gnl|CDD|100045 cd03354, LbH_SAT, Serine acetyltransferase (SAT): SAT catalyzes the CoA-dependent acetylation of the side chain hydroxyl group of L-serine to form O-acetylserine, as the first step of a two-step biosynthetic pathway in bacteria and plants leading to the formation of L-cysteine

 Score =  181 bits (461), Expect = 6e-57
 Identities = 65/101 (64%), Positives = 74/101 (73%)

Query: 253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNG 312
             +DIHPGAKIG GL  DH TG+V+GETAVIGDN +I   VTLGG GK  G RHP IG+ 
Sbjct: 1   TGIDIHPGAKIGPGLFIDHGTGIVIGETAVIGDNCTIYQGVTLGGKGKGGGKRHPTIGDN 60

Query: 313 VLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNP 353
           V++GAG  ILGNI IGD  KIGA +VV KDVP  +T VG P
Sbjct: 61  VVIGAGAKILGNITIGDNVKIGANAVVTKDVPANSTVVGVP 101

This reaction represents a key metabolic point of regulation for the cysteine biosynthetic pathway due to its feedback inhibition by cysteine. The enzyme is a 175 kDa homohexamer, composed of a dimer of homotrimers. Each subunit contains an N-terminal alpha helical region and a C-terminal left-handed beta-helix (LbH) subdomain with 5 turns, each containing a hexapeptide repeat motif characteristic of the acyltransferase superfamily of enzymes. The trimer interface mainly involves the C-terminal LbH subdomain while the dimer (of trimers) interface is mediated by the N-terminal alpha helical subdomain. Length = 101

>gnl|CDD|219022 pfam06426, SATase_N, Serine acetyltransferase, N-terminal

 Score =  155 bits (395), Expect = 4e-47
 Identities = 51/105 (48%), Positives = 72/105 (68%)

Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFM 181
           +W +++ EA    E EP+L+S+  A+IL+H SLESALA  L+ KL+S ++ + TL ELF 
Sbjct: 1   VWSRIRAEAERAAEREPLLASFLHATILNHDSLESALAYRLANKLASPTMSADTLRELFD 60

Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQA 226
                D EI++A +ADL+A+++RDPAC  Y   LL FKGF A QA
Sbjct: 61  EAYAADPEIVEAARADLLAVRDRDPACDRYLTPLLYFKGFHALQA 105

The N-terminal domain of serine acetyltransferase has a sequence that is conserved in plants and bacteria. Length = 105

>gnl|CDD|198039 smart00971, SATase_N, Serine acetyltransferase, N-terminal

 Score =  139 bits (354), Expect = 5e-41
 Identities = 48/105 (45%), Positives = 68/105 (64%)

Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFM 181
           +W +++ EAR   E EP+L+S+ +A+IL+H SLE+ALA  L+ KL +  + +  L ELF 
Sbjct: 1   VWQRIRAEAREAAEREPILASFLYATILNHDSLEAALAYRLANKLGNADMSADLLRELFE 60

Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQA 226
                D EI++A  AD+ A+ +RDPAC  Y   LL FKGF A QA
Sbjct: 61  DAYAADPEIVEAAAADIQAVYDRDPACDRYLTPLLYFKGFHALQA 105

The N-terminal domain of serine acetyltransferase has a sequence that is conserved in plants.and bacteria. Length = 105

>gnl|CDD|234265 TIGR03570, NeuD_NnaD, sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family

 Score =  100 bits (252), Expect = 3e-25
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 10/99 (10%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I+P  +IG  ++ +  TG +V    VIGD V I   VTL G           IG GV +G
Sbjct: 105 INPDVRIGDNVIIN--TGAIVEHDCVIGDYVHIAPGVTLSG--------GVVIGEGVFIG 154

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAR 355
           AG  I+  + IG GA +GAG+VV KD+P     VG PA+
Sbjct: 155 AGATIIQGVTIGAGAVVGAGAVVTKDIPDGGVVVGVPAK 193

This family of proteins includes the characterized NeuD sialic acid O-acetyltransferase enzymes from E. coli and Streptococcus agalactiae (group B strep). These two are quite closely related to one another, so extension of this annotation to other members of the family in unsupported without additional independent evidence. The neuD gene is often observed in close proximity to the neuABC genes for the biosynthesis of CMP-N-acetylneuraminic acid (CMP-sialic acid), and NeuD sequences from these organisms were used to construct the seed for this model. Nevertheless, there are numerous instances of sequences identified by this model which are observed in a different genomic context (although almost universally in exopolysaccharide biosynthesis-related loci), as well as in genomes for which the biosynthesis of sialic acid (SA) is undemonstrated. Even in the cases where the association with SA biosynthesis is strong, it is unclear in the literature whether the biological substrate is SA iteself, CMP-SA, or a polymer containing SA. Similarly, it is unclear to what extent the enzyme has a preference for acetylation at the 7, 8 or 9 positions. In the absence of evidence of association with SA, members of this family may be involved with the acetylation of differring sugar substrates, or possibly the delivery of alternative acyl groups. The closest related sequences to this family (and those used to root the phylogenetic tree constructed to create this model) are believed to be succinyltransferases involved in lysine biosynthesis. These proteins contain repeats of the bacterial transferase hexapeptide (pfam00132), although often these do not register above the trusted cutoff. Length = 193

>gnl|CDD|100050 cd03360, LbH_AT_putative, Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain

 Score = 95.2 bits (238), Expect = 4e-23
 Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 10/97 (10%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I+P A+IG  ++ +  TG V+G   VIGD V I   V L G           IG G  +G
Sbjct: 111 INPDARIGDNVIIN--TGAVIGHDCVIGDFVHIAPGVVLSG--------GVTIGEGAFIG 160

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNP 353
           AG  I+  + IG GA IGAG+VV KDVP  +  VGNP
Sbjct: 161 AGATIIQGVTIGAGAIIGAGAVVTKDVPDGSVVVGNP 197

The alignment contains 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. A few members are identified as NeuD, a sialic acid (Sia) O-acetyltransferase that is required for Sia synthesis and surface polysaccharide sialylation. Length = 197

>gnl|CDD|100053 cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins

 Score = 91.0 bits (227), Expect = 1e-22
 Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 5/100 (5%)

Query: 263 IGRGLLFDHATGVVVGETAVIGDNVSIL---HNVTLGGTGKMSGDRHP--KIGNGVLVGA 317
           IG G +     G+ +G+  +IG NV+I    H++         G       IG+ V +GA
Sbjct: 10  IGPGCVISAGGGITIGDNVLIGPNVTIYDHNHDIDDPERPIEQGVTSAPIVIGDDVWIGA 69

Query: 318 GTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
              IL  + IGDGA +GAGSVV KDVPP +   GNPA++I
Sbjct: 70  NVVILPGVTIGDGAVVGAGSVVTKDVPPNSIVAGNPAKVI 109

MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form. Length = 109

>gnl|CDD|100048 cd03358, LbH_WxcM_N_like, WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain

 Score = 90.6 bits (226), Expect = 2e-22
 Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 21/117 (17%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP------- 307
           V I    KIG  +     + V + E   I D+V I  NV        + D +P       
Sbjct: 11  VFIENDVKIGDNVKIQ--SNVSIYEGVTIEDDVFIGPNVVF------TNDLYPRSKIYRK 62

Query: 308 ------KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
                  +  G  +GA   IL  + IG+ A +GAG+VV KDVPP    VGNPAR+IG
Sbjct: 63  WELKGTTVKRGASIGANATILPGVTIGEYALVGAGAVVTKDVPPYALVVGNPARIIG 119

WcxM is thought to be bifunctional, catalyzing both the isomerization and transacetylation reactions of keto-hexoses. It contains an N-terminal LbH domain responsible for the transacetylation function and a C-terminal isomerase domain. The LbH domain contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), typical of enzymes with acyltransferase activity. Length = 119

>gnl|CDD|223188 COG0110, WbbJ, Acetyltransferase (isoleucine patch superfamily) [General function prediction only]

 Score = 88.4 bits (219), Expect = 1e-20
 Identities = 49/140 (35%), Positives = 59/140 (42%), Gaps = 18/140 (12%)

Query: 232 RLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVV--VGETAVIGDNVSI 289
              +  +     +I+  V             IG   L      VV  VGE   IGDNV +
Sbjct: 42  GRLVGIKIGEVAVIRPPVRIDLGEKN---LTIGD--LCFIGVNVVILVGEGITIGDNVVV 96

Query: 290 LHNVTL---GGTGKMSGDRHP--------KIGNGVLVGAGTCILGNIKIGDGAKIGAGSV 338
             NVT+      G                 IG  V +GAG  IL  + IG+GA IGAGSV
Sbjct: 97  GPNVTIYTNSHPGDFVTANIGALVGAGPVTIGEDVWIGAGAVILPGVTIGEGAVIGAGSV 156

Query: 339 VLKDVPPRTTAVGNPARLIG 358
           V KDVPP     GNPAR+I 
Sbjct: 157 VTKDVPPYGIVAGNPARVIR 176

Length = 190

>gnl|CDD|182295 PRK10191, PRK10191, putative acyl transferase; Provisional

 Score = 87.3 bits (216), Expect = 1e-20
 Identities = 54/141 (38%), Positives = 75/141 (53%), Gaps = 12/141 (8%)

Query: 226 AHRIAH--RLWLQGRKVL-------ALLIQNRVSE-VFSVDIHPGAKIGRGLLFDHATGV 275
           A+R+AH   +W + + VL        L++   ++E  F  +I   A IGR     H   V
Sbjct: 4   AYRVAHFCSVW-RKKNVLNNLWAAPLLVLYRIITECFFGYEIQAAATIGRRFTIHHGYAV 62

Query: 276 VVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGA 335
           V+ +  V GD+ +I H VT+G  G  +    P IGNGV +GA   ILG+I IG+   +GA
Sbjct: 63  VINKNVVAGDDFTIRHGVTIGNRGADN-MACPHIGNGVELGANVIILGDITIGNNVTVGA 121

Query: 336 GSVVLKDVPPRTTAVGNPARL 356
           GSVVL  VP     VG  AR+
Sbjct: 122 GSVVLDSVPDNALVVGEKARV 142

Length = 146

>gnl|CDD|188531 TIGR04016, WcaB, colanic acid biosynthesis acetyltransferase WcaB

 Score = 84.2 bits (208), Expect = 1e-19
 Identities = 56/141 (39%), Positives = 76/141 (53%), Gaps = 12/141 (8%)

Query: 226 AHRIAH--RLWLQGRKVL-------ALLIQNRVSE-VFSVDIHPGAKIGRGLLFDHATGV 275
           A+RIAH   +W + + VL        L++   ++E +F  +I   A IGR     H   V
Sbjct: 4   AYRIAHFCSVW-RKKNVLNNLWAAPVLVLYRLITECLFGYEIQAAATIGRRFTIHHGYAV 62

Query: 276 VVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGA 335
           V+ +  V GD+ +I H VT+G  G  S    P IGNGV +GA   ILG+I IG+   IGA
Sbjct: 63  VINKNVVAGDDFTIRHGVTIGNRGADSL-ACPVIGNGVELGANVIILGDITIGNNVTIGA 121

Query: 336 GSVVLKDVPPRTTAVGNPARL 356
           GSVVL  +P     VG  AR+
Sbjct: 122 GSVVLDSIPDNALVVGEKARV 142

This gene is one of the acetyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species. Length = 146

>gnl|CDD|100047 cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates

 Score = 84.4 bits (210), Expect = 2e-19
 Identities = 42/110 (38%), Positives = 52/110 (47%), Gaps = 12/110 (10%)

Query: 257 IHPGAK--IGRGLLF-DHATGVVVGETAVIGDNVSIL---H--NVTLGGTGKMSGDRHP- 307
           IH G            D A  V +G+  +IG NV I    H  +      G       P 
Sbjct: 63  IHIGDNFYANFNCTILDVA-PVTIGDNVLIGPNVQIYTAGHPLDPEERNRGLEYA--KPI 119

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
            IG+ V +G G  IL  + IGD + IGAGSVV KD+P    A GNPAR+I
Sbjct: 120 TIGDNVWIGGGVIILPGVTIGDNSVIGAGSVVTKDIPANVVAAGNPARVI 169

MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Length = 169

>gnl|CDD|100038 cd00208, LbetaH, Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X)

 Score = 77.7 bits (192), Expect = 4e-18
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 261 AKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTC 320
             IG G+        V+    VIGDNV+I     +G     +      IG+ V +GA   
Sbjct: 1   VFIGEGVKIHP--KAVIRGPVVIGDNVNIGPGAVIGAATGPNEKNPTIIGDNVEIGANAV 58

Query: 321 ILGNIKIGDGAKIGAGSVVL 340
           I G +KIGD A IGAG+VV 
Sbjct: 59  IHGGVKIGDNAVIGAGAVVT 78

Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms. Length = 78

>gnl|CDD|100040 cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others

 Score = 77.2 bits (191), Expect = 4e-17
 Identities = 38/121 (31%), Positives = 46/121 (38%), Gaps = 26/121 (21%)

Query: 263 IGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTG----------------------- 299
           +G           V G+   IG   SI   V +G  G                       
Sbjct: 4   VGDYSYGSGPDCDVGGDKLSIGKFCSIAPGVKIGLGGNHPTDWVSTYPFYIFGGEWEDDA 63

Query: 300 ---KMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARL 356
                       IGN V +G G  IL  + IGDGA I AG+VV KDVPP     GNPA++
Sbjct: 64  KFDDWPSKGDVIIGNDVWIGHGATILPGVTIGDGAVIAAGAVVTKDVPPYAIVGGNPAKV 123

Query: 357 I 357
           I
Sbjct: 124 I 124

Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Length = 145

>gnl|CDD|132571 TIGR03532, DapD_Ac, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase

 Score = 72.5 bits (178), Expect = 1e-14
 Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 2/101 (1%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I+ GA+IG G + D     V+G  A +G NV I     L G  +    +   I + VL+G
Sbjct: 113 INIGAEIGEGTMID--MNAVLGGRATVGKNVHIGAGAVLAGVIEPPSAKPVVIEDNVLIG 170

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           A   IL  +++G GA + AG++V +DVPP T   G PA++I
Sbjct: 171 ANAVILEGVRVGKGAVVAAGAIVTEDVPPNTVVAGVPAKVI 211

This enzyme is part of the diaminopimelate pathway of lysine biosynthesis. Alternate name: tetrahydrodipicolinate N-acetyltransferase. Note that IUBMB lists this alternate name as the accepted name. Unfortunately, the related succinyl transferase acting on the same substrate (EC:2.3.1.117, TIGR00695) uses the opposite standard. We have decided to give these two enzymes names which more clearly indicated that they act on the same substrate. Length = 231

>gnl|CDD|100051 cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E

 Score = 69.4 bits (171), Expect = 3e-14
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 13/79 (16%)

Query: 282 VIGDNVSILHNVTL-GGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVL 340
           +IGDNV++ H   L G T          IG+  L+G G  IL    IG G+ + AGS+V 
Sbjct: 62  IIGDNVTVGHGAVLHGCT----------IGDNCLIGMGAIILDGAVIGKGSIVAAGSLVP 111

Query: 341 --KDVPPRTTAVGNPARLI 357
             K +PP +   G+PA+++
Sbjct: 112 PGKVIPPGSLVAGSPAKVV 130

coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain. Length = 153

>gnl|CDD|181930 PRK09527, lacA, galactoside O-acetyltransferase; Reviewed

 Score = 70.0 bits (171), Expect = 5e-14
 Identities = 46/123 (37%), Positives = 62/123 (50%), Gaps = 14/123 (11%)

Query: 245 IQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTG----- 299
           ++  V   +  +IH    IGR    +    +V   T  IGDNV I  NVTL  TG     
Sbjct: 64  VEPPVYFSYGSNIH----IGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHH 119

Query: 300 --KMSGDRHP---KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPA 354
             + +G+ +     IGN V +G+   I   + IGD + IGAGSVV KD+PP   A G P 
Sbjct: 120 ELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSVVTKDIPPNVVAAGVPC 179

Query: 355 RLI 357
           R+I
Sbjct: 180 RVI 182

Length = 203

>gnl|CDD|100042 cd03351, LbH_UDP-GlcNAc_AT, UDP-N-acetylglucosamine O-acyltransferase (UDP-GlcNAc acyltransferase): Proteins in this family catalyze the transfer of (R)-3-hydroxymyristic acid from its acyl carrier protein thioester to UDP-GlcNAc

 Score = 69.8 bits (172), Expect = 1e-13
 Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 17/111 (15%)

Query: 255 VDIHPGAKIGRGL-------LFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP 307
           V IH G   G G+       L      V V    VIG+NV + +N TL G        H 
Sbjct: 90  VTIHRGTAQGGGVTRIGNNNLL--MAYVHVAHDCVIGNNVILANNATLAG--------HV 139

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
           +IG+  ++G  + +    +IG  A +G GS V++DVPP   A GN ARL G
Sbjct: 140 EIGDYAIIGGLSAVHQFCRIGRHAMVGGGSGVVQDVPPYVIAAGNRARLRG 190

It is the first enzyme in the lipid A biosynthetic pathway and is also referred to as LpxA. Lipid A is essential for the growth of Escherichia coli and related bacteria. It is also essential for maintaining the integrity of the outer membrane. UDP-GlcNAc acyltransferase is a homotrimer of left-handed parallel beta helix (LbH) subunits. Each subunit contains an N-terminal LbH region with 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), and a C-terminal alpha-helical region. Length = 254

>gnl|CDD|235390 PRK05289, PRK05289, UDP-N-acetylglucosamine acyltransferase; Provisional

 Score = 68.2 bits (168), Expect = 4e-13
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 17/112 (15%)

Query: 254 SVDIHPGAKIGRGL-------LFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRH 306
            V I+ G   G G+       L      V V    V+G++V + +N TL G        H
Sbjct: 92  FVTINRGTVQGGGVTRIGDNNLL--MAYVHVAHDCVVGNHVILANNATLAG--------H 141

Query: 307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
            ++G+  ++G  T +   ++IG  A +G  S V +DVPP   A GNPARL G
Sbjct: 142 VEVGDYAIIGGLTAVHQFVRIGAHAMVGGMSGVSQDVPPYVLAEGNPARLRG 193

Length = 262

>gnl|CDD|100043 cd03352, LbH_LpxD, UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD): The enzyme catalyzes the transfer of 3-hydroxymyristic acid or 3-hydroxy-arachidic acid, depending on the organism, from the acyl carrier protein (ACP) to UDP-3-O-acyl-glucosamine to produce UDP-2,3-diacyl-GlcNAc

 Score = 67.0 bits (165), Expect = 5e-13
 Identities = 43/109 (39%), Positives = 55/109 (50%), Gaps = 16/109 (14%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDN-VSILHNVTLG-------GTGKMSGDRH 306
           V+I     I RG L D  T  V+G+   I DN V I HNV +G         G ++G   
Sbjct: 99  VEIGANTTIDRGALGD--T--VIGDGTKI-DNLVQIAHNVRIGENCLIAAQVG-IAG--S 150

Query: 307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAR 355
             IG+ V++G    I G++ IGDG  IGAGS V   VPP     G PA+
Sbjct: 151 TTIGDNVIIGGQVGIAGHLTIGDGVVIGAGSGVTSIVPPGEYVSGTPAQ 199

This constitutes the third step in the lipid A biosynthetic pathway in Gram-negative bacteria. LpxD is a homotrimer, with each subunit consisting of a novel combination of an N-terminal uridine-binding domain, a core lipid-binding left-handed parallel beta helix (LbH) domain, and a C-terminal alpha-helical extension. The LbH domain contains 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Length = 205

>gnl|CDD|223735 COG0663, PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]

 Score = 64.9 bits (159), Expect = 2e-12
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 15/91 (16%)

Query: 274 GVVV----GETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGD 329
           GVV+    G    IGD+V+I H   + G           IG+ VL+G G  +L    IGD
Sbjct: 62  GVVIHADPGYPVTIGDDVTIGHGAVVHGC---------TIGDNVLIGMGATVLDGAVIGD 112

Query: 330 GAKIGAGSVVL--KDVPPRTTAVGNPARLIG 358
           G+ +GAG++V   K++P  +  VG+PA+++ 
Sbjct: 113 GSIVGAGALVTPGKEIPGGSLVVGSPAKVVR 143

Length = 176

>gnl|CDD|223974 COG1044, LpxD, UDP-3-O-[3-hydroxymyristoyl]

 Score = 67.3 bits (165), Expect = 2e-12
 Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 18/113 (15%)

Query: 254 SVDIHPGAK--IGRGLLFDHATGVVVGETAVIGDNVSILHNVTLG-------GTGKMSGD 304
            V+I  GA   I RG L D     V+GE   I + V I HNV +G         G ++G 
Sbjct: 208 DVEI--GANTTIDRGALDD----TVIGEGVKIDNLVQIGHNVRIGEHCIIAGQVG-IAG- 259

Query: 305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
              KIG  V++G    I G+++IGDG  IGA S V+  +     + G PA+ I
Sbjct: 260 -SVKIGKYVIIGGQVGIAGHLEIGDGVTIGARSGVMASITEPGYSGGIPAQPI 311

Length = 338

>gnl|CDD|236703 PRK10502, PRK10502, putative acyl transferase; Provisional

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 27/123 (21%)

Query: 260 GAKIGRGLL------FDHATGVVVGETAVIGDNVSI--LHNVTLGGTGKMS-------GD 304
           GAKIG+G++        +   + +G+ A IGD+V +  L  +T+G    +S       G 
Sbjct: 51  GAKIGKGVVIRPSVRITYPWKLTIGDYAWIGDDVWLYNLGEITIGAHCVISQKSYLCTGS 110

Query: 305 RHPK------------IGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGN 352
                           IG G  + A   +   + IG GA +GA S V K +P  T   GN
Sbjct: 111 HDYSDPHFDLNTAPIVIGEGCWLAADVFVAPGVTIGSGAVVGARSSVFKSLPANTICRGN 170

Query: 353 PAR 355
           PA 
Sbjct: 171 PAV 173

Length = 182

>gnl|CDD|223973 COG1043, LpxA, Acyl-[acyl carrier protein]

 Score = 64.9 bits (159), Expect = 5e-12
 Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 19/119 (15%)

Query: 247 NRVSEVFSVDIHPGAKIGRGL-------LFDHATGVVVGETAVIGDNVSILHNVTLGGTG 299
           N + E   V IH G   G G+       L        V    VIG+N  + +N TL G  
Sbjct: 88  NTIRE--FVTIHRGTVQGGGVTRIGDNNLI--MAYAHVAHDCVIGNNCILANNATLAG-- 141

Query: 300 KMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
                 H ++G+  ++G  + +   ++IG  A IG  S V +DVPP   A GN ARL G
Sbjct: 142 ------HVEVGDYAIIGGLSAVHQFVRIGAHAMIGGLSAVSQDVPPYVIASGNHARLRG 194

Length = 260

>gnl|CDD|132351 TIGR03308, phn_thr-fam, phosphonate metabolim protein, transferase hexapeptide repeat family

 Score = 63.3 bits (154), Expect = 1e-11
 Identities = 29/76 (38%), Positives = 40/76 (52%)

Query: 304 DRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENP 363
            +   IG+ V +G G  IL  + IG+GA I AG+VV KDV P T   G PA+LI  +  P
Sbjct: 106 AKRVTIGHDVWIGHGAVILPGVTIGNGAVIAAGAVVTKDVAPYTIVAGVPAKLIRRRFPP 165

Query: 364 FMLDKIPSFTMDHTSH 379
            +  +I +       H
Sbjct: 166 EIAARIEALAWWDWDH 181

This family of proteins contains copies of the Bacterial transferase hexapeptide repeat family (pfam00132) and is only found in operons encoding the phosphonate C-P lyase system (GenProp0232). Many C-P lyase operons, however, lack a homolog of this protein. Length = 204

>gnl|CDD|233599 TIGR01853, lipid_A_lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 14/110 (12%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLG-------GTGKMSGDRHP 307
           V+I     I RG   D     ++GE   I + V I HN  +G         G ++G    
Sbjct: 202 VEIGANTTIDRGAFDD----TIIGEGTKIDNLVQIAHNCRIGENCIIVAQVG-IAGS--T 254

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           KIG  V++G    + G+++IGD   IGA S V K +PP     G PAR  
Sbjct: 255 KIGRNVIIGGQVGVAGHLEIGDNVTIGAKSGVTKSIPPPGVYGGIPARPN 304

This model describes LpxD, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species. This protein represents the third step from UDP-N-acetyl-D-glucosamine. The group added at this step generally is 14:0(3-OH) (myristate) but may vary; in Aquifex it appears to be 16:0(3-OH) (palmitate) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 324

>gnl|CDD|188173 TIGR01852, lipid_A_lpxA, acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 13/109 (11%)

Query: 255 VDIHPGAKIGRGL--LFDHA---TGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKI 309
           V I+ G   G G+  + ++        +    V+G++V + +N TL G        H ++
Sbjct: 89  VTINRGTASGGGVTRIGNNNLLMAYSHIAHDCVVGNHVILANNATLAG--------HVEV 140

Query: 310 GNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
           G+  ++G    +   ++IG  A IG  S V KDVPP   A GN ARL G
Sbjct: 141 GDYAIIGGLVAVHQFVRIGRYAMIGGLSAVSKDVPPYCLAEGNRARLRG 189

This model describes LpxA, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species, but this protein represents the first step (from UDP-N-acetyl-D-glucosamine) and appears to be conserved in function. Proteins from this family contain many copies of the bacterial transferase hexapeptide repeat (pfam00132) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 254

>gnl|CDD|100063 cd05825, LbH_wcaF_like, wcaF-like: This group is composed of the protein product of the E

 Score = 60.3 bits (147), Expect = 2e-11
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 7/83 (8%)

Query: 282 VIGDNVSILHNVTL-GGTGKMSGDRHP------KIGNGVLVGAGTCILGNIKIGDGAKIG 334
            IG +  I     L  G+        P       IG+G  V A   +   + IG+GA +G
Sbjct: 25  TIGSDACISQGAYLCTGSHDYRSPAFPLITAPIVIGDGAWVAAEAFVGPGVTIGEGAVVG 84

Query: 335 AGSVVLKDVPPRTTAVGNPARLI 357
           A SVV++D+P  T   GNPA  +
Sbjct: 85  ARSVVVRDLPAWTVYAGNPAVPV 107

coli wcaF gene and similar proteins. WcaF is part of the gene cluster responsible for the biosynthesis of the extracellular polysaccharide colanic acid. The wcaF protein is predicted to contain a left-handed parallel beta-helix (LbH) domain encoded by imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Many are trimeric in their active forms. Length = 107

>gnl|CDD|100055 cd04650, LbH_FBP, Ferripyochelin Binding Protein (FBP): FBP is an outer membrane protein which plays a role in iron acquisition

 Score = 58.7 bits (142), Expect = 2e-10
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 11/77 (14%)

Query: 283 IGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVL-- 340
           IGD V+I HN  + G          K+GN V+VG G  +L   KIGD   IGAG+VV   
Sbjct: 64  IGDYVTIGHNAVVHGA---------KVGNYVIVGMGAILLNGAKIGDHVIIGAGAVVTPG 114

Query: 341 KDVPPRTTAVGNPARLI 357
           K++P  +  +G PA+++
Sbjct: 115 KEIPDYSLVLGVPAKVV 131

It binds iron when it is complexed with pyochelin. It adopts the left-handed parallel beta-helix (LbH) structure, and contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Acyltransferase activity has not been observed in this group. Length = 154

>gnl|CDD|100044 cd03353, LbH_GlmU_C, N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase

 Score = 57.8 bits (141), Expect = 7e-10
 Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 35/119 (29%)

Query: 257 IHPGAKIGRGLLFDHATGVVVG---ET--AVIGDNVSILH-----------NVTLG-GT- 298
           + PG  +G G        V +G   E   + IG+     H            V +G GT 
Sbjct: 82  LRPGTVLGEG--------VHIGNFVEIKKSTIGEGSKANHLSYLGDAEIGEGVNIGAGTI 133

Query: 299 -----GKMSGDRHP-KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG 351
                G     +H   IG+ V +G+ + ++  + IGDGA I AGS + KDVPP   A+ 
Sbjct: 134 TCNYDGVN---KHRTVIGDNVFIGSNSQLVAPVTIGDGATIAAGSTITKDVPPGALAIA 189

It is a bifunctional bacterial enzyme that catalyzes two consecutive steps in the formation of UDP-N-acetylglucosamine (UDP-GlcNAc), an important precursor in bacterial cell wall formation. The two enzymatic activities, uridyltransferase and acetyltransferase, are carried out by two independent domains. The C-terminal LbH domain possesses the acetyltransferase activity. It catalyzes the CoA-dependent acetylation of GlcN-1-phosphate to GlcNAc-1-phosphate. The LbH domain contains 10 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X. The acetyltransferase active site is located at the interface between two subunits of the active LbH trimer. Length = 193

>gnl|CDD|100043 cd03352, LbH_LpxD, UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD): The enzyme catalyzes the transfer of 3-hydroxymyristic acid or 3-hydroxy-arachidic acid, depending on the organism, from the acyl carrier protein (ACP) to UDP-3-O-acyl-glucosamine to produce UDP-2,3-diacyl-GlcNAc

 Score = 57.0 bits (139), Expect = 1e-09
 Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 25/99 (25%)

Query: 257 IHPGAKIGRG-------LLFDHATGVVVGETAVIGDNVSILHNVTLGGTG---KMSGDRH 306
           I PG  IG G       ++  +   V + E  +IGD V I     +G  G      G   
Sbjct: 28  IGPGVVIGDGVVIGDDCVIHPN---VTIYEGCIIGDRVIIHSGAVIGSDGFGFAPDGGGW 84

Query: 307 PK--------IGNGVLVGAGTCI----LGNIKIGDGAKI 333
            K        IG+ V +GA T I    LG+  IGDG KI
Sbjct: 85  VKIPQLGGVIIGDDVEIGANTTIDRGALGDTVIGDGTKI 123

This constitutes the third step in the lipid A biosynthetic pathway in Gram-negative bacteria. LpxD is a homotrimer, with each subunit consisting of a novel combination of an N-terminal uridine-binding domain, a core lipid-binding left-handed parallel beta helix (LbH) domain, and a C-terminal alpha-helical extension. The LbH domain contains 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Length = 205

>gnl|CDD|225082 COG2171, DapD, Tetrahydrodipicolinate N-succinyltransferase [Amino acid transport and metabolism]

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 260 GAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSG-DRHP-KIGNGVLVGA 317
           GA  G G + D      VG  A +G N  I    ++GG   +     +P  IG+  L+GA
Sbjct: 138 GAGTGEGTMVD--GRASVGSCAQVGKNSHIGGGASIGGV--LEPLQANPVIIGDNCLIGA 193

Query: 318 GTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPA 354
            + ++  + +GDG  + AG  + +D        G  A
Sbjct: 194 NSEVVEGVIVGDGCVVAAGVFITQDTKIYDRVAGRVA 230

Length = 271

>gnl|CDD|234858 PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional

 Score = 58.2 bits (142), Expect = 2e-09
 Identities = 45/156 (28%), Positives = 60/156 (38%), Gaps = 52/156 (33%)

Query: 242 ALLIQNRVSEVFSVDIHPGAKIG---------RGLLFD--HATGVVVG------------ 278
           A+ I NRV       IH GA IG         RG          V++G            
Sbjct: 166 AVRIGNRVI------IHSGAVIGSDGFGFANDRGGWVKIPQLGRVIIGDDVEIGANTTID 219

Query: 279 -----ETAVIGDN------VSILHNVTLG-------GTGKMSGDRHPKIGNGVLVGAGTC 320
                +T VIG+       V I HNV +G         G ++G    KIG   ++G    
Sbjct: 220 RGALDDT-VIGEGVKIDNLVQIAHNVVIGRHTAIAAQVG-IAGS--TKIGRYCMIGGQVG 275

Query: 321 ILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGN-PAR 355
           I G+++IGDG  I A S V K +P         PA+
Sbjct: 276 IAGHLEIGDGVTITAMSGVTKSIPEPGEYSSGIPAQ 311

Length = 343

>gnl|CDD|137467 PRK09677, PRK09677, putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ; Provisional

 Score = 56.4 bits (136), Expect = 2e-09
 Identities = 22/50 (44%), Positives = 29/50 (58%)

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
            IG  V +G    IL  + IG+G  +GA SVV K +P  T   GNPA++I
Sbjct: 132 VIGQRVWIGENVTILPGVSIGNGCIVGANSVVTKSIPENTVIAGNPAKII 181

Length = 192

>gnl|CDD|234858 PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional

 Score = 57.8 bits (141), Expect = 3e-09
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 23/105 (21%)

Query: 239 KVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGT 298
           ++  L      +   +  IHP A              V+  +A IG+ VSI  N  +G  
Sbjct: 86  RLAQLFDP-PATPSPAAGIHPSA--------------VIDPSAKIGEGVSIGPNAVIG-- 128

Query: 299 GKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV 343
                     IG+GV++GAG  I   +KIG   ++ A   +   V
Sbjct: 129 ------AGVVIGDGVVIGAGAVIGDGVKIGADCRLHANVTIYHAV 167

Length = 343

>gnl|CDD|184641 PRK14352, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

 Score = 56.5 bits (137), Expect = 9e-09
 Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 11/103 (10%)

Query: 261 AKIGRGLLFDHATGVVVGETAVIGDNVSI-LHNVTLG--GTGKMSGDRHPKIGNGVLVGA 317
           A IGRG    H T   VG+ A IG++ +I   +V +   G  K        IG+ V  G+
Sbjct: 358 ATIGRGTKVPHLT--YVGD-ADIGEHSNIGASSVFVNYDGVNK----HRTTIGSHVRTGS 410

Query: 318 GTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAV-GNPARLIGG 359
            T  +  + +GDGA  GAG+V+ +DVPP   AV   P R I G
Sbjct: 411 DTMFVAPVTVGDGAYTGAGTVIREDVPPGALAVSEGPQRNIEG 453

Length = 482

>gnl|CDD|182235 PRK10092, PRK10092, maltose O-acetyltransferase; Provisional

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 10/85 (11%)

Query: 283 IGDNVSI---LHNVT----LGGTGKMSGDRHPK---IGNGVLVGAGTCILGNIKIGDGAK 332
           IGDN  +   +H  T    L    + SG    K   IGN V +G    I   + IGD   
Sbjct: 96  IGDNCMLAPGVHIYTATHPLDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVV 155

Query: 333 IGAGSVVLKDVPPRTTAVGNPARLI 357
           + +G+VV KDVP      GNPAR+I
Sbjct: 156 VASGAVVTKDVPDNVVVGGNPARII 180

Length = 183

>gnl|CDD|189409 pfam00132, Hexapep, Bacterial transferase hexapeptide (six repeats)

 Score = 47.4 bits (114), Expect = 8e-08
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query: 306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK 341
              IG  VL+G    I G + IGD   IGAG V+  
Sbjct: 1   GTVIGENVLIGPNVVIGGGVIIGDNVIIGAGVVIGG 36

Length = 36

>gnl|CDD|100043 cd03352, LbH_LpxD, UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD): The enzyme catalyzes the transfer of 3-hydroxymyristic acid or 3-hydroxy-arachidic acid, depending on the organism, from the acyl carrier protein (ACP) to UDP-3-O-acyl-glucosamine to produce UDP-2,3-diacyl-GlcNAc

 Score = 51.3 bits (124), Expect = 1e-07
 Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 16/86 (18%)

Query: 254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGV 313
           S  I     IG           V+GE  VIGD V I   V +G            IG+  
Sbjct: 1   SAKIGENVSIG--------PNAVIGEGVVIGDGVVIGPGVVIG--------DGVVIGDDC 44

Query: 314 LVGAGTCILGNIKIGDGAKIGAGSVV 339
           ++     I     IGD   I +G+V+
Sbjct: 45  VIHPNVTIYEGCIIGDRVIIHSGAVI 70

This constitutes the third step in the lipid A biosynthetic pathway in Gram-negative bacteria. LpxD is a homotrimer, with each subunit consisting of a novel combination of an N-terminal uridine-binding domain, a core lipid-binding left-handed parallel beta helix (LbH) domain, and a C-terminal alpha-helical extension. The LbH domain contains 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Length = 205

>gnl|CDD|184642 PRK14353, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

 Score = 52.9 bits (128), Expect = 1e-07
 Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 48/141 (34%)

Query: 259 PGAKIGRGLL---FDHATGVVVGETAVIG------------DNVSI-----LHNVTLGGT 298
           PG  +  G +   F H  G  VGE A +G            +   +     + N  LG  
Sbjct: 285 PGVTVASGAVIHAFSHLEGAHVGEGAEVGPYARLRPGAELGEGAKVGNFVEVKNAKLGEG 344

Query: 299 GKMS-----GDRH-----------------------PKIGNGVLVGAGTCILGNIKIGDG 330
            K++     GD                          +IG G  +G+ + ++  + IGDG
Sbjct: 345 AKVNHLTYIGDATIGAGANIGAGTITCNYDGFNKHRTEIGAGAFIGSNSALVAPVTIGDG 404

Query: 331 AKIGAGSVVLKDVPPRTTAVG 351
           A I +GSV+ +DVP    A+G
Sbjct: 405 AYIASGSVITEDVPDDALALG 425

Length = 446

>gnl|CDD|234858 PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional

 Score = 51.7 bits (125), Expect = 3e-07
 Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 35/106 (33%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLG--------------GTGK 300
           V I  GA IG G        V +G    +  NV+I H V +G              G G 
Sbjct: 137 VVIGAGAVIGDG--------VKIGADCRLHANVTIYHAVRIGNRVIIHSGAVIGSDGFGF 188

Query: 301 MSGD-RHPK--------IGNGVLVGAGTCI----LGNIKIGDGAKI 333
            +      K        IG+ V +GA T I    L +  IG+G KI
Sbjct: 189 ANDRGGWVKIPQLGRVIIGDDVEIGANTTIDRGALDDTVIGEGVKI 234

Length = 343

>gnl|CDD|237687 PRK14357, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

 Score = 51.7 bits (124), Expect = 3e-07
 Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 11/110 (10%)

Query: 261 AKIGRGLLFDHATGVVVGETAVIGDNVSI-LHNVTLGGTGKMSGDRHPK-IGNGVLVGAG 318
           + IG      H T   +G+ A +G NV+I    +T    GK    ++P  I +G  +G+ 
Sbjct: 342 STIGENTKAQHLT--YLGD-ATVGKNVNIGAGTITCNYDGK---KKNPTFIEDGAFIGSN 395

Query: 319 TCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDK 368
           + ++  ++IG GA IGAGSV+ +DVPP + A+G   +++  KE  ++L K
Sbjct: 396 SSLVAPVRIGKGALIGAGSVITEDVPPYSLALGRARQIV--KEG-WVLKK 442

Length = 448

>gnl|CDD|233299 TIGR01173, glmU, UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase

 Score = 51.1 bits (123), Expect = 5e-07
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 12/89 (13%)

Query: 273 TGVVVGETAVIGDNVSILHNVTLG-GT------GKMSGDRHP-KIGNGVLVGAGTCILGN 324
            G   G  + +GD   I  NV +G GT      G    ++H   IG+GV +G+ T ++  
Sbjct: 353 KGSKAGHLSYLGD-AEIGSNVNIGAGTITCNYDGA---NKHKTIIGDGVFIGSNTQLVAP 408

Query: 325 IKIGDGAKIGAGSVVLKDVPPRTTAVGNP 353
           +K+GDGA I AGS V KDVP    A+   
Sbjct: 409 VKVGDGATIAAGSTVTKDVPEGALAISRA 437

This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Central intermediary metabolism, Amino sugars]. Length = 451

>gnl|CDD|233832 TIGR02353, NRPS_term_dom, non-ribosomal peptide synthetase terminal domain of unknown function

 Score = 51.3 bits (123), Expect = 5e-07
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 260 GAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDR----HPKIGNGVLV 315
           GAKIG+G+    +   V  +   IG    +   V L G  +    R       +G    +
Sbjct: 112 GAKIGKGV-DIGSLPPVCTDLLTIGAGTIVRKEVMLLGY-RAERGRLHTGPVTLGRDAFI 169

Query: 316 GAGTCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIG 358
           G  + +  +  IGDGA++G GS +     +P      G+PA+  G
Sbjct: 170 GTRSTLDIDTSIGDGAQLGHGSALQGGQSIPDGERWHGSPAQKTG 214

This domain is found exclusively in non-ribosomal peptide synthetases and always as the final domain in the polypeptide. This domain is roughly 700 amino acids in size and is found in polypeptides roughly twice that size. Length = 695

>gnl|CDD|223974 COG1044, LpxD, UDP-3-O-[3-hydroxymyristoyl]

 Score = 50.4 bits (121), Expect = 7e-07
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 10/87 (11%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I P A IG+ +       VV+G   VIG+NV I     +G         + KIG+G ++ 
Sbjct: 108 IDPTATIGKNV--SIGPNVVIGAGVVIGENVVIGAGAVIG--------ENVKIGDGTVIH 157

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDV 343
               I  N+ IG+   I +G+V+  D 
Sbjct: 158 PNVTIYHNVVIGNNVIIHSGAVIGADG 184

Length = 338

>gnl|CDD|100043 cd03352, LbH_LpxD, UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD): The enzyme catalyzes the transfer of 3-hydroxymyristic acid or 3-hydroxy-arachidic acid, depending on the organism, from the acyl carrier protein (ACP) to UDP-3-O-acyl-glucosamine to produce UDP-2,3-diacyl-GlcNAc

 Score = 48.9 bits (118), Expect = 8e-07
 Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 29/102 (28%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I  G  IG G++     GVV+G+  VIGD+  I  NVT+             IG+ V++ 
Sbjct: 16  IGEGVVIGDGVVIGP--GVVIGDGVVIGDDCVIHPNVTIY--------EGCIIGDRVIIH 65

Query: 317 AGTCI-------------------LGNIKIGDGAKIGAGSVV 339
           +G  I                   LG + IGD  +IGA + +
Sbjct: 66  SGAVIGSDGFGFAPDGGGWVKIPQLGGVIIGDDVEIGANTTI 107

This constitutes the third step in the lipid A biosynthetic pathway in Gram-negative bacteria. LpxD is a homotrimer, with each subunit consisting of a novel combination of an N-terminal uridine-binding domain, a core lipid-binding left-handed parallel beta helix (LbH) domain, and a C-terminal alpha-helical extension. The LbH domain contains 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Length = 205

>gnl|CDD|224128 COG1207, GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]

 Score = 50.6 bits (122), Expect = 8e-07
 Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 20/100 (20%)

Query: 260 GAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLG-GT------GKMSGDRHP-KIGN 311
            A IG+G    H T   +G+ A IG+NV+I      G GT      GK   ++    IG+
Sbjct: 355 KATIGKGSKAGHLT--YLGD-AEIGENVNI------GAGTITCNYDGK---NKFKTIIGD 402

Query: 312 GVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG 351
            V +G+ + ++  + IGDGA I AGS + KDVP    A+ 
Sbjct: 403 NVFIGSNSQLVAPVTIGDGATIAAGSTITKDVPEGALAIS 442

Length = 460

>gnl|CDD|100041 cd03350, LbH_THP_succinylT, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (also called THP succinyltransferase): THDP N-succinyltransferase catalyzes the conversion of tetrahydrodipicolinate and succinyl-CoA to N-succinyltetrahydrodipicolinate and CoA

 Score = 47.4 bits (113), Expect = 9e-07
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 20/116 (17%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVL 314
           V+I  GA +  G + D  +   VG  A IG NV +     +GG  +        I + V 
Sbjct: 28  VNI--GAYVDEGTMVD--SWATVGSCAQIGKNVHLSAGAVIGGVLEPLQATPVIIEDDVF 83

Query: 315 VGAGTCILGNIKIGDGAKIGAGSVV---------------LKDVPPRTTAV-GNPA 354
           +GA   ++  + +G GA + AG V+                  VPP +  V G+  
Sbjct: 84  IGANCEVVEGVIVGKGAVLAAGVVLTQSTPIYDRETGEIYYGRVPPGSVVVAGSLP 139

It is the committed step in the succinylase pathway by which bacteria synthesize L-lysine and meso-diaminopimelate, a component of peptidoglycan. The enzyme is homotrimeric and each subunit contains an N-terminal region with alpha helices and hairpin loops, as well as a C-terminal region with a left-handed parallel alpha-helix (LbH) structural motif encoded by hexapeptide repeat motifs. Length = 139

>gnl|CDD|184643 PRK14354, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

 Score = 49.8 bits (120), Expect = 1e-06
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 35/119 (29%)

Query: 257 IHPGAKIGRGLLFDHATGVVVG-----ETAVIGDNVSILH-----------NVTLG-GT- 298
           + PG+ IG          V +G     + + IG+   + H           NV +G GT 
Sbjct: 331 LRPGSVIGEE--------VKIGNFVEIKKSTIGEGTKVSHLTYIGDAEVGENVNIGCGTI 382

Query: 299 -----GKMSGDRHP-KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG 351
                GK   ++    IG+   +G  + ++  + +GD A I AGS + KDVP    A+ 
Sbjct: 383 TVNYDGK---NKFKTIIGDNAFIGCNSNLVAPVTVGDNAYIAAGSTITKDVPEDALAIA 438

Length = 458

>gnl|CDD|223974 COG1044, LpxD, UDP-3-O-[3-hydroxymyristoyl]

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 29/98 (29%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I  G  IG  ++     G V+GE   IGD   I  NVT+          +  IGN V++ 
Sbjct: 126 IGAGVVIGENVVI--GAGAVIGENVKIGDGTVIHPNVTIY--------HNVVIGNNVIIH 175

Query: 317 AGTCI-------------------LGNIKIGDGAKIGA 335
           +G  I                   +G + IGD  +IGA
Sbjct: 176 SGAVIGADGFGYAGTAIGWVKIPQIGRVIIGDDVEIGA 213

Length = 338

>gnl|CDD|235390 PRK05289, PRK05289, UDP-N-acetylglucosamine acyltransferase; Provisional

 Score = 47.8 bits (115), Expect = 3e-06
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 28/83 (33%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           + PGAKIG          V +G   VIG NV                     IG+G ++G
Sbjct: 11  VEPGAKIGEN--------VEIGPFCVIGPNV--------------------VIGDGTVIG 42

Query: 317 AGTCILGNIKIGDGAKIGAGSVV 339
           +   I G+  IG   +I   + +
Sbjct: 43  SHVVIDGHTTIGKNNRIFPFASI 65

Length = 262

>gnl|CDD|237686 PRK14356, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

 Score = 47.8 bits (114), Expect = 6e-06
 Identities = 20/43 (46%), Positives = 29/43 (67%)

Query: 309 IGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG 351
           IG G  +G+ T ++  + IGDGA +GAGSV+ KDVP  + A+ 
Sbjct: 401 IGEGAFIGSNTALVAPVTIGDGALVGAGSVITKDVPDGSLAIA 443

Length = 456

>gnl|CDD|224129 COG1208, GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]

 Score = 46.9 bits (112), Expect = 8e-06
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 11/92 (11%)

Query: 254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPK--IGN 311
              I PGA IG           V+GE   IG+ V I +++ +       G       IG 
Sbjct: 267 GAKIGPGALIGPY--------TVIGEGVTIGNGVEIKNSIIMDNVVIGHGSYIGDSIIGE 318

Query: 312 GVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV 343
              +GA   I+G++ IG  ++I  G VV    
Sbjct: 319 NCKIGAS-LIIGDVVIGINSEILPGVVVGPGS 349

Length = 358

>gnl|CDD|233599 TIGR01853, lipid_A_lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

 Score = 46.9 bits (112), Expect = 9e-06
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 16/96 (16%)

Query: 248 RVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP 307
           +V+E+F       A I       H T VV   +A IGD V+I  NV +G           
Sbjct: 79  KVAELFDPPPKREAGI-------HPTAVV-DPSAKIGDGVTIGPNVVIG--------AGV 122

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV 343
           +IG  V++G G  I  ++ IGDG++I    V+ + V
Sbjct: 123 EIGENVIIGPGVVIGDDVVIGDGSRIHPNVVIYERV 158

This model describes LpxD, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species. This protein represents the third step from UDP-N-acetyl-D-glucosamine. The group added at this step generally is 14:0(3-OH) (myristate) but may vary; in Aquifex it appears to be 16:0(3-OH) (palmitate) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 324

>gnl|CDD|100043 cd03352, LbH_LpxD, UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD): The enzyme catalyzes the transfer of 3-hydroxymyristic acid or 3-hydroxy-arachidic acid, depending on the organism, from the acyl carrier protein (ACP) to UDP-3-O-acyl-glucosamine to produce UDP-2,3-diacyl-GlcNAc

 Score = 45.1 bits (108), Expect = 1e-05
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 8/64 (12%)

Query: 280 TAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV 339
           +A IG+NVSI  N  +G            IG+GV++G G  I   + IGD   I     +
Sbjct: 1   SAKIGENVSIGPNAVIG--------EGVVIGDGVVIGPGVVIGDGVVIGDDCVIHPNVTI 52

Query: 340 LKDV 343
            +  
Sbjct: 53  YEGC 56

This constitutes the third step in the lipid A biosynthetic pathway in Gram-negative bacteria. LpxD is a homotrimer, with each subunit consisting of a novel combination of an N-terminal uridine-binding domain, a core lipid-binding left-handed parallel beta helix (LbH) domain, and a C-terminal alpha-helical extension. The LbH domain contains 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Length = 205

>gnl|CDD|223974 COG1044, LpxD, UDP-3-O-[3-hydroxymyristoyl]

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 8/68 (11%)

Query: 276 VVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGA 335
           V+  TA IG NVSI  NV +G            IG  V++GAG  I  N+KIGDG  I  
Sbjct: 107 VIDPTATIGKNVSIGPNVVIG--------AGVVIGENVVIGAGAVIGENVKIGDGTVIHP 158

Query: 336 GSVVLKDV 343
              +  +V
Sbjct: 159 NVTIYHNV 166

Length = 338

>gnl|CDD|223974 COG1044, LpxD, UDP-3-O-[3-hydroxymyristoyl]

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 17/93 (18%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTG-----------KMSGDR 305
           I    KIG G +      V +    VIG+NV I     +G  G           K+    
Sbjct: 144 IGENVKIGDGTVI--HPNVTIYHNVVIGNNVIIHSGAVIGADGFGYAGTAIGWVKIPQIG 201

Query: 306 HPKIGNGVLVGAGTCI----LGNIKIGDGAKIG 334
              IG+ V +GA T I    L +  IG+G KI 
Sbjct: 202 RVIIGDDVEIGANTTIDRGALDDTVIGEGVKID 234

Length = 338

>gnl|CDD|183539 PRK12461, PRK12461, UDP-N-acetylglucosamine acyltransferase; Provisional

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 36/106 (33%), Positives = 43/106 (40%), Gaps = 29/106 (27%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I P AK+G G        V +G  AVIG NV I                    G+G  +G
Sbjct: 8   IDPSAKLGSG--------VEIGPFAVIGANVEI--------------------GDGTWIG 39

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKEN 362
               ILG  +IG   KI  G+VV  D P   T  G  +RL  G  N
Sbjct: 40  PHAVILGPTRIGKNNKIHQGAVV-GDEPQDFTYKGEESRLEIGDRN 84

Length = 255

>gnl|CDD|100042 cd03351, LbH_UDP-GlcNAc_AT, UDP-N-acetylglucosamine O-acyltransferase (UDP-GlcNAc acyltransferase): Proteins in this family catalyze the transfer of (R)-3-hydroxymyristic acid from its acyl carrier protein thioester to UDP-GlcNAc

 Score = 45.5 bits (109), Expect = 2e-05
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 28/83 (33%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           + PGAKIG          V +G   VIG NV                    +IG+G ++G
Sbjct: 8   VDPGAKIGEN--------VEIGPFCVIGPNV--------------------EIGDGTVIG 39

Query: 317 AGTCILGNIKIGDGAKIGAGSVV 339
           +   I G   IG   +I   + +
Sbjct: 40  SHVVIDGPTTIGKNNRIFPFASI 62

It is the first enzyme in the lipid A biosynthetic pathway and is also referred to as LpxA. Lipid A is essential for the growth of Escherichia coli and related bacteria. It is also essential for maintaining the integrity of the outer membrane. UDP-GlcNAc acyltransferase is a homotrimer of left-handed parallel beta helix (LbH) subunits. Each subunit contains an N-terminal LbH region with 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), and a C-terminal alpha-helical region. Length = 254

>gnl|CDD|181867 PRK09451, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 16/89 (17%)

Query: 261 AKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMS----GDRHPK--IGNGVL 314
           A++G+G    H T   +G+ A IGDNV+I       G G ++    G    K  IG+ V 
Sbjct: 353 ARLGKGSKAGHLT--YLGD-AEIGDNVNI-------GAGTITCNYDGANKFKTIIGDDVF 402

Query: 315 VGAGTCILGNIKIGDGAKIGAGSVVLKDV 343
           VG+ T ++  + +G GA IGAG+ V +DV
Sbjct: 403 VGSDTQLVAPVTVGKGATIGAGTTVTRDV 431

Length = 456

>gnl|CDD|223973 COG1043, LpxA, Acyl-[acyl carrier protein]

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 29/106 (27%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I PGA+IG          V +G   +IG NV                    +IG+G ++ 
Sbjct: 12  IEPGAEIGED--------VKIGPFCIIGPNV--------------------EIGDGTVLK 43

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKEN 362
           +   + G+  IG   +I   +  + + P      G P RLI G  N
Sbjct: 44  SHVVVEGHTTIGRNNRIFPFA-SIGEDPQDLKYKGEPTRLIIGDNN 88

Length = 260

>gnl|CDD|100044 cd03353, LbH_GlmU_C, N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase

 Score = 43.6 bits (104), Expect = 4e-05
 Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 10/89 (11%)

Query: 268 LFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKI 327
           L D  T   +     IG +V I   V L G           IG   ++G   C++ +  I
Sbjct: 4   LIDPET-TYIDGDVEIGVDVVIDPGVILEG--------KTVIGEDCVIGPN-CVIKDSTI 53

Query: 328 GDGAKIGAGSVVLKDVPPRTTAVGNPARL 356
           GDG  I A SV+   V      VG  A L
Sbjct: 54  GDGVVIKASSVIEGAVIGNGATVGPFAHL 82

It is a bifunctional bacterial enzyme that catalyzes two consecutive steps in the formation of UDP-N-acetylglucosamine (UDP-GlcNAc), an important precursor in bacterial cell wall formation. The two enzymatic activities, uridyltransferase and acetyltransferase, are carried out by two independent domains. The C-terminal LbH domain possesses the acetyltransferase activity. It catalyzes the CoA-dependent acetylation of GlcN-1-phosphate to GlcNAc-1-phosphate. The LbH domain contains 10 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X. The acetyltransferase active site is located at the interface between two subunits of the active LbH trimer. Length = 193

>gnl|CDD|233599 TIGR01853, lipid_A_lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

 Score = 44.2 bits (105), Expect = 6e-05
 Identities = 33/113 (29%), Positives = 43/113 (38%), Gaps = 36/113 (31%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGD------NVSILHNVTLG------------ 296
           V I  G +IG  ++     GVV+G+  VIGD      NV I   V LG            
Sbjct: 116 VVIGAGVEIGENVIIG--PGVVIGDDVVIGDGSRIHPNVVIYERVQLGKNVIIHSGAVIG 173

Query: 297 ----GTGKMSGDRHPKI--------GNGVLVGAGTCI----LGNIKIGDGAKI 333
               G    +   H KI         + V +GA T I      +  IG+G KI
Sbjct: 174 SDGFGYAHTANGGHVKIPQIGRVIIEDDVEIGANTTIDRGAFDDTIIGEGTKI 226

This model describes LpxD, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species. This protein represents the third step from UDP-N-acetyl-D-glucosamine. The group added at this step generally is 14:0(3-OH) (myristate) but may vary; in Aquifex it appears to be 16:0(3-OH) (palmitate) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 324

>gnl|CDD|233832 TIGR02353, NRPS_term_dom, non-ribosomal peptide synthetase terminal domain of unknown function

 Score = 44.4 bits (105), Expect = 9e-05
 Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 20/107 (18%)

Query: 260 GAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGG----------TGKMSGDRHPKI 309
           G KIGRG+  D   G  + E     D V+I  + TL               M  D    I
Sbjct: 597 GVKIGRGVYID---GTDLTER----DLVTIGDDSTLNEGSVIQTHLFEDRVMKSD-TVTI 648

Query: 310 GNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK--DVPPRTTAVGNPA 354
           G+G  +G G  +L  + +G+G+ +G  S+V+K  +VP  T   GNPA
Sbjct: 649 GDGATLGPGAIVLYGVVMGEGSVLGPDSLVMKGEEVPAHTRWRGNPA 695

This domain is found exclusively in non-ribosomal peptide synthetases and always as the final domain in the polypeptide. This domain is roughly 700 amino acids in size and is found in polypeptides roughly twice that size. Length = 695

>gnl|CDD|233599 TIGR01853, lipid_A_lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           + P AKIG G+       VV+G    IG+NV I   V +G            IG+G  + 
Sbjct: 100 VDPSAKIGDGV--TIGPNVVIGAGVEIGENVIIGPGVVIG--------DDVVIGDGSRIH 149

Query: 317 AGTCILGNIKIGDGAKIGAGSVV 339
               I   +++G    I +G+V+
Sbjct: 150 PNVVIYERVQLGKNVIIHSGAVI 172

This model describes LpxD, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species. This protein represents the third step from UDP-N-acetyl-D-glucosamine. The group added at this step generally is 14:0(3-OH) (myristate) but may vary; in Aquifex it appears to be 16:0(3-OH) (palmitate) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 324

>gnl|CDD|188173 TIGR01852, lipid_A_lpxA, acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 29/106 (27%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I PGA+IG          V +G   ++G  V                    KIG+GV + 
Sbjct: 7   IEPGAEIGEN--------VEIGPFCIVGPGV--------------------KIGDGVELK 38

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKEN 362
           +   ILG+  IG+G +I  G+ V+  VP      G   RLI G  N
Sbjct: 39  SHVVILGHTTIGEGTRIFPGA-VIGGVPQDLKYKGEKTRLIIGDNN 83

This model describes LpxA, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species, but this protein represents the first step (from UDP-N-acetyl-D-glucosamine) and appears to be conserved in function. Proteins from this family contain many copies of the bacterial transferase hexapeptide repeat (pfam00132) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 254

>gnl|CDD|188523 TIGR04008, WcaF, colanic acid biosynthesis acetyltransferase WcaF

 Score = 40.3 bits (94), Expect = 5e-04
 Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 27/125 (21%)

Query: 260 GAKIGRGLLFDHATGVV------VGETAVIGDNVSI--LHNVTLGGTGKMS--------- 302
           GAKIG+ ++   +  +       +G+ A +GD+  +  L  +T+G    +S         
Sbjct: 51  GAKIGKNVVIRPSVKITYPWKLTLGDYAWVGDDAVLYTLGEITIGAHSVISQKSYLCTGS 110

Query: 303 ---GDRHPKIGNGVLVGAGTCILGN-------IKIGDGAKIGAGSVVLKDVPPRTTAVGN 352
                +H  I    +V    C L         + IGDG  +GA S V K +P      GN
Sbjct: 111 HDYMSKHFDINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPANKICRGN 170

Query: 353 PARLI 357
           PA + 
Sbjct: 171 PAVVT 175

This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species. This acetyltransferase is believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit). Length = 180

>gnl|CDD|184646 PRK14360, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 15/88 (17%)

Query: 281 AVIGDNVSILHNVTLGGTGKMSGD-----RHP-KIGNGVLVGAGTCILGNIKIGDGAKIG 334
           A +G+ V+I       G G ++ +     +H   IG+    GA + ++  I +G+   + 
Sbjct: 366 ATLGEQVNI-------GAGTITANYDGVKKHRTVIGDRSKTGANSVLVAPITLGEDVTVA 418

Query: 335 AGSVVLKDVPPRTTAVGNPARLIGGKEN 362
           AGS + KDVP  + A+    ++I  KEN
Sbjct: 419 AGSTITKDVPDNSLAIARSRQVI--KEN 444

Length = 450

>gnl|CDD|184646 PRK14360, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

 Score = 41.1 bits (97), Expect = 7e-04
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 19/78 (24%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I  G +IG G L          E + IG+NV++L++V              +IG+GV +G
Sbjct: 283 IGSGCRIGPGSLI---------ENSQIGENVTVLYSVV----------SDSQIGDGVKIG 323

Query: 317 AGTCILGNIKIGDGAKIG 334
               +    +IG   +IG
Sbjct: 324 PYAHLRPEAQIGSNCRIG 341

Length = 450

>gnl|CDD|236996 PRK11830, dapD, 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional

 Score = 40.2 bits (95), Expect = 0.001
 Identities = 32/88 (36%), Positives = 37/88 (42%), Gaps = 28/88 (31%)

Query: 255 VDIHPGAKIGRGLLFD-HATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGV 313
           V+I  GA +  G + D  AT   VG  A IG NV +      GG G         IG GV
Sbjct: 129 VNI--GAYVDEGTMVDTWAT---VGSCAQIGKNVHLS-----GGVG---------IG-GV 168

Query: 314 L--VGAGTCILGNIKIGDGAKIGAGSVV 339
           L  + A   I     I D   IGA S V
Sbjct: 169 LEPLQANPVI-----IEDNCFIGARSEV 191

Length = 272

>gnl|CDD|100049 cd03359, LbH_Dynactin_5, Dynactin 5 (or subunit p25); Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport

 Score = 38.7 bits (91), Expect = 0.001
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%)

Query: 308 KIGNGVLVGAGTCILGN-IKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIG 358
           +IG+ V +G   C++G    I D  KI  G+VV  D  +PP +   G PAR IG
Sbjct: 91  QIGSYVHIGKN-CVIGRRCIIKDCVKILDGTVVPPDTVIPPYSVVSGRPARFIG 143

Dynactin is a heterocomplex of at least eight subunits, including a 150,000-MW protein called Glued, the actin-capping protein Arp1, and dynamatin. In vitro binding experiments show that dynactin enhances dynein-dependent motility, possibly through interaction with microtubules and vesicles. Subunit p25 is part of the pointed-end subcomplex in dynactin that also includes p26, p27, and Arp11. This subcomplex interacts with membranous cargoes. p25 and p27 contain imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), indicating a left-handed parallel beta helix (LbH) structural domain. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Length = 161

>gnl|CDD|189409 pfam00132, Hexapep, Bacterial transferase hexapeptide (six repeats)

 Score = 35.4 bits (83), Expect = 0.002
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 14/50 (28%)

Query: 274 GVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILG 323
           G V+GE  +IG NV I   V               IG+ V++GAG  I G
Sbjct: 1   GTVIGENVLIGPNVVIGGGVI--------------IGDNVIIGAGVVIGG 36

Length = 36

>gnl|CDD|233299 TIGR01173, glmU, UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 9/82 (10%)

Query: 280 TAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV 339
           T  IG +V I  NV L G          KIG+ V++G G C++ N  IG    I A SV+
Sbjct: 261 TVEIGRDVEIDPNVILEG--------KVKIGDDVVIGPG-CVIKNSVIGSNVVIKAYSVL 311

Query: 340 LKDVPPRTTAVGNPARLIGGKE 361
                     VG  ARL  G  
Sbjct: 312 EGSEIGEGCDVGPFARLRPGSV 333

This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Central intermediary metabolism, Amino sugars]. Length = 451

>gnl|CDD|237688 PRK14358, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 15/108 (13%)

Query: 257 IHPGAKIGRGLLFDH---------ATGVVVGETAVIGDNVSILHNVTLG-GTGKMSGD-- 304
           + PG  +G G+   +           GV  G  A +GD V+I     +G GT   + D  
Sbjct: 337 LRPGTVLGEGVHIGNFVETKNARLDAGVKAGHLAYLGD-VTIGAETNVGAGTIVANFDGV 395

Query: 305 --RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAV 350
                K+G GV +G+ T ++    +GD A I AGS V  DVP    AV
Sbjct: 396 NKHQSKVGAGVFIGSNTTLIAPRVVGDAAFIAAGSAVHDDVPEGAMAV 443

Length = 481

>gnl|CDD|237685 PRK14355, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 15/88 (17%)

Query: 274 GVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI 333
           GVV+G    I   V I      G T         +IG G  +  G  I G  +IGD   +
Sbjct: 268 GVVIGRDTTIYPGVCIS-----GDT---------RIGEGCTIEQGVVIKG-CRIGDDVTV 312

Query: 334 GAGSVVLKDVPPRTTAVGNPARLIGGKE 361
            AGSV+   V     A+G  A L  G E
Sbjct: 313 KAGSVLEDSVVGDDVAIGPMAHLRPGTE 340

Length = 459

>gnl|CDD|237685 PRK14355, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 13/76 (17%)

Query: 281 AVIGDNVSILHNVTLGGTGKMS----GDRHPK--IGNGVLVGAGTCILGNIKIGDGAKIG 334
           A IG NV+I       G G ++    G +  +  I + V VG+    +  + +G  + I 
Sbjct: 373 ATIGRNVNI-------GCGTITCNYDGVKKHRTVIEDDVFVGSDVQFVAPVTVGRNSLIA 425

Query: 335 AGSVVLKDVPPRTTAV 350
           AG+ V KDVPP + A+
Sbjct: 426 AGTTVTKDVPPDSLAI 441

Length = 459

>gnl|CDD|100058 cd04745, LbH_paaY_like, paaY-like: This group is composed by uncharacterized proteins with similarity to the protein product of the E

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 11/82 (13%)

Query: 278 GETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGS 337
           G+  V+ +N  I H   L G           IG   LVG    ++    IG+ + +GA +
Sbjct: 59  GQDTVLEENGHIGHGAILHGC---------TIGRNALVGMNAVVMDGAVIGEESIVGAMA 109

Query: 338 VVLK--DVPPRTTAVGNPARLI 357
            V     +PPR+   G+PA++I
Sbjct: 110 FVKAGTVIPPRSLIAGSPAKVI 131

coli paaY gene, which is part of the paa gene cluster responsible for phenylacetic acid degradation. Proteins in this group are expected to adopt the left-handed parallel beta-helix (LbH) structure. They contain imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Similarity to gamma carbonic anhydrase and Ferripyochelin Binding Protein (FBP) may suggest metal binding capacity. Length = 155

>gnl|CDD|183539 PRK12461, PRK12461, UDP-N-acetylglucosamine acyltransferase; Provisional

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 34/135 (25%)

Query: 257 IHPGAKIGRGLLFDHATG----VVVGETAVIGDNVSILHNVTLGGTGKMSGDR------- 305
           IH GA +G         G    + +G+  VI + V+I H  T GG     G+        
Sbjct: 56  IHQGAVVGDEPQDFTYKGEESRLEIGDRNVIREGVTI-HRGTKGGGVTRIGNDNLLMAYS 114

Query: 306 ---HP-KIGNGVLVGAGTCILGNIKIGDGAKIGA------------------GSVVLKDV 343
              H  +IGN V++  G  + G++ +GD A I                    GS + KDV
Sbjct: 115 HVAHDCQIGNNVILVNGALLAGHVTVGDRAIISGNCLVHQFCRIGALAMMAGGSRISKDV 174

Query: 344 PPRTTAVGNPARLIG 358
           PP     G+P  + G
Sbjct: 175 PPYCMMAGHPTNVHG 189

Length = 255

>gnl|CDD|100046 cd03356, LbH_G1P_AT_C_like, Left-handed parallel beta-Helix (LbH) domain of a group of proteins with similarity to glucose-1-phosphate adenylyltransferase: Included in this family are glucose-1-phosphate adenylyltransferase, mannose-1-phosphate guanylyltransferase, and the eukaryotic translation initiation factor eIF-2B subunits, epsilon and gamma

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 9/75 (12%)

Query: 274 GVVVGETA-----VIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIG 328
             V+GE A     VIGDNV I   VT+  +  M       IG   ++   + I  N  IG
Sbjct: 5   STVIGENAIIKNSVIGDNVRIGDGVTITNSILMDNV---TIGANSVI-VDSIIGDNAVIG 60

Query: 329 DGAKIGAGSVVLKDV 343
           +  ++    ++  DV
Sbjct: 61  ENVRVVNLCIIGDDV 75

Most members of this family contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold, followed by a LbH fold domain with at least 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). eIF-2B epsilon contains an additional domain of unknown function at the C-terminus. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Length = 79

>gnl|CDD|215167 PLN02296, PLN02296, carbonate dehydratase

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 11/79 (13%)

Query: 281 AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVL 340
            +IGDNV+I H+  L G           + +   VG G  +L  + +   A + AG++V 
Sbjct: 120 TIIGDNVTIGHSAVLHGC---------TVEDEAFVGMGATLLDGVVVEKHAMVAAGALVR 170

Query: 341 KD--VPPRTTAVGNPARLI 357
           ++  +P      GNPA+ +
Sbjct: 171 QNTRIPSGEVWAGNPAKFL 189

Length = 269

>gnl|CDD|224128 COG1207, GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]

 Score = 38.7 bits (91), Expect = 0.004
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 9/60 (15%)

Query: 280 TAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV 339
              IG +V I  NV L G        +  IG+ V++G G  ++ +  IGD A I A SV+
Sbjct: 268 DVEIGRDVVIEPNVILEG--------NTVIGDNVVIGPG-SVIKDSVIGDNAVIKAYSVI 318

Length = 460

>gnl|CDD|181867 PRK09451, glmU, bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 9/78 (11%)

Query: 284 GDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV 343
           G +V I  NV + G        +  +GN V +GAG C+L N  IGD  +I   SVV    
Sbjct: 269 GRDVEIDTNVIIEG--------NVTLGNRVKIGAG-CVLKNCVIGDDCEISPYSVVEDAN 319

Query: 344 PPRTTAVGNPARLIGGKE 361
                 +G  ARL  G E
Sbjct: 320 LGAACTIGPFARLRPGAE 337

Length = 456

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	388
PLN02357	360	serine acetyltransferase	100.0
PLN02694	294	serine O-acetyltransferase	100.0
KOG4750	269	consensus Serine O-acetyltransferase [Amino acid t	100.0
PLN02739	355	serine acetyltransferase	100.0
PRK11132	273	cysE serine acetyltransferase; Provisional	100.0
COG1045	194	CysE Serine acetyltransferase [Amino acid transpor	100.0
TIGR01172	162	cysE serine O-acetyltransferase. Cysteine biosynth	99.97
PF06426	105	SATase_N: Serine acetyltransferase, N-terminal ; I	99.85
PRK10191	146	putative acyl transferase; Provisional	99.82
COG1045	194	CysE Serine acetyltransferase [Amino acid transpor	99.79
PRK10502	182	putative acyl transferase; Provisional	99.78
PRK10092	183	maltose O-acetyltransferase; Provisional	99.77
PLN02694	294	serine O-acetyltransferase	99.77
PLN02739	355	serine acetyltransferase	99.77
PRK09527	203	lacA galactoside O-acetyltransferase; Reviewed	99.77
cd03357	169	LbH_MAT_GAT Maltose O-acetyltransferase (MAT) and	99.74
COG0110	190	WbbJ Acetyltransferase (isoleucine patch superfami	99.72
cd05825	107	LbH_wcaF_like wcaF-like: This group is composed of	99.72
PRK09677	192	putative lipopolysaccharide biosynthesis O-acetyl	99.72
cd03349	145	LbH_XAT Xenobiotic acyltransferase (XAT): The XAT	99.69
cd03354	101	LbH_SAT Serine acetyltransferase (SAT): SAT cataly	99.69
TIGR03532	231	DapD_Ac 2,3,4,5-tetrahydropyridine-2,6-dicarboxyla	99.69
cd03358	119	LbH_WxcM_N_like WcxM-like, Left-handed parallel be	99.68
PLN02357	360	serine acetyltransferase	99.68
TIGR03308	204	phn_thr-fam phosphonate metabolim protein, transfe	99.68
PRK11132	273	cysE serine acetyltransferase; Provisional	99.66
KOG4750	269	consensus Serine O-acetyltransferase [Amino acid t	99.66
PRK05289	262	UDP-N-acetylglucosamine acyltransferase; Provision	99.64
cd04646	164	LbH_Dynactin_6 Dynactin 6 (or subunit p27): Dynact	99.64
PRK13627	196	carnitine operon protein CaiE; Provisional	99.64
PRK12461	255	UDP-N-acetylglucosamine acyltransferase; Provision	99.63
TIGR01853	324	lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosam	99.62
COG0663	176	PaaY Carbonic anhydrases/acetyltransferases, isole	99.62
cd03360	197	LbH_AT_putative Putative Acyltransferase (AT), Lef	99.61
cd03350	139	LbH_THP_succinylT 2,3,4,5-tetrahydropyridine-2,6-d	99.61
PLN02296	269	carbonate dehydratase	99.6
cd04745	155	LbH_paaY_like paaY-like: This group is composed by	99.59
TIGR01852	254	lipid_A_lpxA acyl-[acyl-carrier-protein]--UDP-N-ac	99.59
TIGR03570	201	NeuD_NnaD sugar O-acyltransferase, sialic acid O-a	99.59
cd03352	205	LbH_LpxD UDP-3-O-acyl-glucosamine N-acyltransferas	99.59
cd03351	254	LbH_UDP-GlcNAc_AT UDP-N-acetylglucosamine O-acyltr	99.58
PRK00892	343	lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-ac	99.57
cd04647	109	LbH_MAT_like Maltose O-acyltransferase (MAT)-like:	99.57
TIGR00965	269	dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate	99.56
TIGR02287	192	PaaY phenylacetic acid degradation protein PaaY. M	99.54
PLN02472	246	uncharacterized protein	99.54
PRK11830	272	dapD 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-	99.51
cd04650	154	LbH_FBP Ferripyochelin Binding Protein (FBP): FBP	99.48
PRK09451	456	glmU bifunctional N-acetylglucosamine-1-phosphate	99.46
TIGR01173	451	glmU UDP-N-acetylglucosamine diphosphorylase/gluco	99.46
PRK14360	450	glmU bifunctional N-acetylglucosamine-1-phosphate	99.46
cd03359	161	LbH_Dynactin_5 Dynactin 5 (or subunit p25); Dynact	99.45
PRK14353	446	glmU bifunctional N-acetylglucosamine-1-phosphate	99.43
TIGR02353	695	NRPS_term_dom non-ribosomal peptide synthetase ter	99.42
PRK14357	448	glmU bifunctional N-acetylglucosamine-1-phosphate	99.41
PRK14352	482	glmU bifunctional N-acetylglucosamine-1-phosphate	99.4
TIGR01172	162	cysE serine O-acetyltransferase. Cysteine biosynth	99.4
cd04645	153	LbH_gamma_CA_like Gamma carbonic anhydrase-like: T	99.39
cd03353	193	LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyl	99.39
COG1044	338	LpxD UDP-3-O-[3-hydroxymyristoyl]	99.38
PRK14359	430	glmU bifunctional N-acetylglucosamine-1-phosphate	99.38
COG1043	260	LpxA Acyl-[acyl carrier protein]	99.38
cd03360	197	LbH_AT_putative Putative Acyltransferase (AT), Lef	99.36
TIGR03570	201	NeuD_NnaD sugar O-acyltransferase, sialic acid O-a	99.33
TIGR03532	231	DapD_Ac 2,3,4,5-tetrahydropyridine-2,6-dicarboxyla	99.33
COG1207	460	GlmU N-acetylglucosamine-1-phosphate uridyltransfe	99.32
PRK14355	459	glmU bifunctional N-acetylglucosamine-1-phosphate	99.31
COG2171	271	DapD Tetrahydrodipicolinate N-succinyltransferase	99.29
PRK14354	458	glmU bifunctional N-acetylglucosamine-1-phosphate	99.28
cd00208	78	LbetaH Left-handed parallel beta-Helix (LbetaH or	99.27
PRK14356	456	glmU bifunctional N-acetylglucosamine-1-phosphate	99.27
cd04649	147	LbH_THP_succinylT_putative Putative 2,3,4,5-tetrah	99.26
cd03352	205	LbH_LpxD UDP-3-O-acyl-glucosamine N-acyltransferas	99.26
PRK12461	255	UDP-N-acetylglucosamine acyltransferase; Provision	99.22
TIGR02353	695	NRPS_term_dom non-ribosomal peptide synthetase ter	99.22
TIGR01853	324	lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosam	99.22
cd03358	119	LbH_WxcM_N_like WcxM-like, Left-handed parallel be	99.22
PRK00892	343	lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-ac	99.2
TIGR01852	254	lipid_A_lpxA acyl-[acyl-carrier-protein]--UDP-N-ac	99.19
cd00710	167	LbH_gamma_CA Gamma carbonic anhydrases (CA): Carbo	99.19
cd03350	139	LbH_THP_succinylT 2,3,4,5-tetrahydropyridine-2,6-d	99.19
TIGR03535	319	DapD_actino 2,3,4,5-tetrahydropyridine-2,6-dicarbo	99.18
PRK05289	262	UDP-N-acetylglucosamine acyltransferase; Provision	99.16
COG1044	338	LpxD UDP-3-O-[3-hydroxymyristoyl]	99.14
PRK10502	182	putative acyl transferase; Provisional	99.13
PRK14358	481	glmU bifunctional N-acetylglucosamine-1-phosphate	99.13
PRK09527	203	lacA galactoside O-acetyltransferase; Reviewed	99.12
cd03351	254	LbH_UDP-GlcNAc_AT UDP-N-acetylglucosamine O-acyltr	99.12
cd04649	147	LbH_THP_succinylT_putative Putative 2,3,4,5-tetrah	99.09
cd03357	169	LbH_MAT_GAT Maltose O-acetyltransferase (MAT) and	99.07
TIGR00965	269	dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate	99.06
PRK10092	183	maltose O-acetyltransferase; Provisional	99.05
PRK13627	196	carnitine operon protein CaiE; Provisional	99.05
cd05636	163	LbH_G1P_TT_C_like Putative glucose-1-phosphate thy	99.04
cd04745	155	LbH_paaY_like paaY-like: This group is composed by	99.04
cd00710	167	LbH_gamma_CA Gamma carbonic anhydrases (CA): Carbo	99.04
TIGR03536	341	DapD_gpp 2,3,4,5-tetrahydropyridine-2,6-dicarboxyl	99.03
PRK09677	192	putative lipopolysaccharide biosynthesis O-acetyl	99.02
cd05636	163	LbH_G1P_TT_C_like Putative glucose-1-phosphate thy	99.02
TIGR03308	204	phn_thr-fam phosphonate metabolim protein, transfe	99.01
cd04646	164	LbH_Dynactin_6 Dynactin 6 (or subunit p27): Dynact	99.01
PLN02296	269	carbonate dehydratase	98.99
PRK14353	446	glmU bifunctional N-acetylglucosamine-1-phosphate	98.99
PLN02472	246	uncharacterized protein	98.98
TIGR02287	192	PaaY phenylacetic acid degradation protein PaaY. M	98.97
PRK11830	272	dapD 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-	98.97
COG0663	176	PaaY Carbonic anhydrases/acetyltransferases, isole	98.94
PRK14352	482	glmU bifunctional N-acetylglucosamine-1-phosphate	98.92
PRK14360	450	glmU bifunctional N-acetylglucosamine-1-phosphate	98.91
KOG1461	673	consensus Translation initiation factor 2B, epsilo	98.91
TIGR01173	451	glmU UDP-N-acetylglucosamine diphosphorylase/gluco	98.91
cd04650	154	LbH_FBP Ferripyochelin Binding Protein (FBP): FBP	98.89
PRK10191	146	putative acyl transferase; Provisional	98.86
cd05787	79	LbH_eIF2B_epsilon eIF-2B epsilon subunit, central	98.86
cd03359	161	LbH_Dynactin_5 Dynactin 5 (or subunit p25); Dynact	98.85
PRK14357	448	glmU bifunctional N-acetylglucosamine-1-phosphate	98.84
PRK09451	456	glmU bifunctional N-acetylglucosamine-1-phosphate	98.83
cd04645	153	LbH_gamma_CA_like Gamma carbonic anhydrase-like: T	98.82
PRK14355	459	glmU bifunctional N-acetylglucosamine-1-phosphate	98.82
PRK14359	430	glmU bifunctional N-acetylglucosamine-1-phosphate	98.82
cd05635	101	LbH_unknown Uncharacterized proteins, Left-handed	98.81
TIGR03536	341	DapD_gpp 2,3,4,5-tetrahydropyridine-2,6-dicarboxyl	98.78
PRK14358	481	glmU bifunctional N-acetylglucosamine-1-phosphate	98.75
COG0110	190	WbbJ Acetyltransferase (isoleucine patch superfami	98.74
cd05825	107	LbH_wcaF_like wcaF-like: This group is composed of	98.72
cd00208	78	LbetaH Left-handed parallel beta-Helix (LbetaH or	98.72
cd05824	80	LbH_M1P_guanylylT_C Mannose-1-phosphate guanylyltr	98.71
PRK14354	458	glmU bifunctional N-acetylglucosamine-1-phosphate	98.71
cd03353	193	LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyl	98.7
COG1043	260	LpxA Acyl-[acyl carrier protein]	98.7
TIGR03535	319	DapD_actino 2,3,4,5-tetrahydropyridine-2,6-dicarbo	98.68
COG2171	271	DapD Tetrahydrodipicolinate N-succinyltransferase	98.66
cd04652	81	LbH_eIF2B_gamma_C eIF-2B gamma subunit, C-terminal	98.65
cd05787	79	LbH_eIF2B_epsilon eIF-2B epsilon subunit, central	98.64
cd04652	81	LbH_eIF2B_gamma_C eIF-2B gamma subunit, C-terminal	98.63
cd05635	101	LbH_unknown Uncharacterized proteins, Left-handed	98.6
KOG3121	184	consensus Dynactin, subunit p25 [Cytoskeleton]	98.59
cd03356	79	LbH_G1P_AT_C_like Left-handed parallel beta-Helix	98.58
cd03356	79	LbH_G1P_AT_C_like Left-handed parallel beta-Helix	98.58
cd04651	104	LbH_G1P_AT_C Glucose-1-phosphate adenylyltransfera	98.58
cd05824	80	LbH_M1P_guanylylT_C Mannose-1-phosphate guanylyltr	98.58
PRK14356	456	glmU bifunctional N-acetylglucosamine-1-phosphate	98.56
KOG1461	673	consensus Translation initiation factor 2B, epsilo	98.55
cd04647	109	LbH_MAT_like Maltose O-acyltransferase (MAT)-like:	98.47
cd03354	101	LbH_SAT Serine acetyltransferase (SAT): SAT cataly	98.43
TIGR01208	353	rmlA_long glucose-1-phosphate thymidylylransferase	98.43
cd03349	145	LbH_XAT Xenobiotic acyltransferase (XAT): The XAT	98.39
PRK00844	407	glgC glucose-1-phosphate adenylyltransferase; Prov	98.34
TIGR02091	361	glgC glucose-1-phosphate adenylyltransferase. This	98.33
PF14602	34	Hexapep_2: Hexapeptide repeat of succinyl-transfer	98.26
PRK05293	380	glgC glucose-1-phosphate adenylyltransferase; Prov	98.23
TIGR02092	369	glgD glucose-1-phosphate adenylyltransferase, GlgD	98.2
PLN02241	436	glucose-1-phosphate adenylyltransferase	98.2
PRK00725	425	glgC glucose-1-phosphate adenylyltransferase; Prov	98.16
COG1208	358	GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas	98.15
TIGR01208	353	rmlA_long glucose-1-phosphate thymidylylransferase	98.14
KOG4042	190	consensus Dynactin subunit p27/WS-3, involved in t	98.13
PRK05293	380	glgC glucose-1-phosphate adenylyltransferase; Prov	98.09
PF00132	36	Hexapep: Bacterial transferase hexapeptide (six re	98.09
COG1208	358	GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas	98.08
PLN02241	436	glucose-1-phosphate adenylyltransferase	98.08
KOG1462	433	consensus Translation initiation factor 2B, gamma	98.06
cd04651	104	LbH_G1P_AT_C Glucose-1-phosphate adenylyltransfera	97.98
COG1207	460	GlmU N-acetylglucosamine-1-phosphate uridyltransfe	97.9
PRK02862	429	glgC glucose-1-phosphate adenylyltransferase; Prov	97.9
KOG1462	433	consensus Translation initiation factor 2B, gamma	97.84
KOG1460	407	consensus GDP-mannose pyrophosphorylase [Carbohydr	97.81
PRK02862	429	glgC glucose-1-phosphate adenylyltransferase; Prov	97.8
KOG1322	371	consensus GDP-mannose pyrophosphorylase/mannose-1-	97.8
PRK00725	425	glgC glucose-1-phosphate adenylyltransferase; Prov	97.8
PRK00844	407	glgC glucose-1-phosphate adenylyltransferase; Prov	97.78
TIGR02091	361	glgC glucose-1-phosphate adenylyltransferase. This	97.68
TIGR02092	369	glgD glucose-1-phosphate adenylyltransferase, GlgD	97.61
PF00132	36	Hexapep: Bacterial transferase hexapeptide (six re	97.58
KOG3121	184	consensus Dynactin, subunit p25 [Cytoskeleton]	97.57
KOG1322	371	consensus GDP-mannose pyrophosphorylase/mannose-1-	97.52
PF14602	34	Hexapep_2: Hexapeptide repeat of succinyl-transfer	97.44
KOG1460	407	consensus GDP-mannose pyrophosphorylase [Carbohydr	97.25
COG0448	393	GlgC ADP-glucose pyrophosphorylase [Carbohydrate t	96.99
PF06426	105	SATase_N: Serine acetyltransferase, N-terminal ; I	96.4
COG0448	393	GlgC ADP-glucose pyrophosphorylase [Carbohydrate t	96.23
COG4801	277	Predicted acyltransferase [General function predic	96.2
COG4801	277	Predicted acyltransferase [General function predic	95.93
KOG4042	190	consensus Dynactin subunit p27/WS-3, involved in t	92.71

>PLN02357 serine acetyltransferase

Probab=100.00  E-value=1.3e-70  Score=543.82  Aligned_cols=354  Identities=71%  Similarity=1.117  Sum_probs=324.5

Q ss_pred             cccccc-CCCCCCCccccccccccCCCcCccccCccccccccccceeecccCCc---CCCCCCCCCCCccccceeeccCC
Q 047635           12 PSLYIN-NAPFFSPHKHLLSSQASSRTSPIFSLSKHHREKTSTAVMATCIDTSQ---ISQDPSRSQNDDHAYRYAKHCRP   87 (388)
Q Consensus        12 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~   87 (388)
                      ++.|.. .++|++|++-         +.+.|+|++..       .||+|+||+.   ..-.++.+|.||+.|+|.|||+|
T Consensus         3 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (360)
T PLN02357          3 SSSPHISLHSFLLPPFS---------CTSTFSLPKSR-------PMAACIDTCRTGTSQLSPKHHDDDSHFYYIKNFCRP   66 (360)
T ss_pred             CCCCcccccccCCCCcc---------ccccccCCCCC-------cchhhhccCCCCCcccCcccccCcccceeeeecccC
Confidence            455555 5888888872         67778887764       5999999953   33334788999999999999999


Q ss_pred             CCCCCccccccCcccccccccccccccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhc
Q 047635           88 SFSDRVSCVPFNRNQEQAIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLS  167 (388)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~  167 (388)
                      +|++.+      .++.+++++..+..+.+ +.+++|++||+||+..+++||+|++||++.||+|++|+++|+++||+||.
T Consensus        67 ~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~w~~~r~ea~~~~~~ep~l~~~~~~~il~~~~~~~al~~~l~~kl~  139 (360)
T PLN02357         67 SFSPFS------GNHTKTIHTRPVEDDLD-RDDDVWLKIQEEAKSDVEQEPILSSYYYASILSHRSLESALANHLSVKLS  139 (360)
T ss_pred             CCcccc------cCCccccccCCCCcccc-ccchHHHHHHHHHHHHHhcCchHHHHHHHHccCCccHHHHHHHHHHHhhC
Confidence            999876      45667777766666655 66789999999999999999999999999999999999999999999999


Q ss_pred             CcccchHHHHHHHHHHhhhcHHHHHHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHh
Q 047635          168 SLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQN  247 (388)
Q Consensus       168 ~~~~~~~~l~~~~~~~l~~~p~i~~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~  247 (388)
                      +..+++.+|++++.++++.+|++.+.+..|+.++.++||++..+..++++++||++++.||++||+|..++..++.+++.
T Consensus       140 ~~~~~~~~~~el~~~aL~~DpdI~e~IraDLaAI~eRDPAciSFL~~~l~~kGf~al~~~Riah~l~~~~~~~la~~i~~  219 (360)
T PLN02357        140 NLNLPSNTLFDLFIGVLEESPEIIESVKQDLRAVKERDPACISYVHCFLNFKGFLACQAHRIAHKLWTQGRKILALLIQN  219 (360)
T ss_pred             CccCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHccCcchhhhhHHHhhCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEE
Q 047635          248 RVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKI  327 (388)
Q Consensus       248 ~~~~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~I  327 (388)
                      ++...++++||+++.||+|++|+|+++++||++++||+||+|+++|+||+.+...+.++++||++|+||+||+|.+|++|
T Consensus       220 ~~~~~f~vdI~p~a~IG~Gv~Idh~~giVIGe~avIGdnV~I~~gVtIGg~g~~~g~~~piIGd~V~IGagA~IlggV~I  299 (360)
T PLN02357        220 RVSEAFAVDIHPGAKIGQGILLDHATGVVIGETAVVGNNVSILHNVTLGGTGKQSGDRHPKIGDGVLIGAGTCILGNITI  299 (360)
T ss_pred             HHHHHhceeeCCCCEECCCeEECCCCceEECCCCEECCCCEEeCCceecCccccCCccCceeCCCeEECCceEEECCeEE
Confidence            99999999999999999999999999999999999999999999999999888888889999999999999999999999


Q ss_pred             CCCCEECCCCEECCCCCCCcEEEecCcEEeccCCCCccccCCCCccccccccccccCCCcC
Q 047635          328 GDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI  388 (388)
Q Consensus       328 Gd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~~~~~~~~~dy~~  388 (388)
                      |++++||+|++|.+|||++++|+|+|||+++++..+......|+++|||..++.+|+||+|
T Consensus       300 Gdga~IGAgSVV~~dVP~~~~v~G~PArvv~~~~~~~~~~~~p~~~m~~~~~~~~~~~~~~  360 (360)
T PLN02357        300 GEGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPIKHDKIPSLTMDQTSHISEWSDYVI  360 (360)
T ss_pred             CCCCEECCCCEECcccCCCcEEECCCeEEEccCCCccccccCCCccccchhcccchhhccC
Confidence            9999999999999999999999999999999877665545789999999999999999998

>PLN02694 serine O-acetyltransferase

Probab=100.00  E-value=1.9e-60  Score=460.30  Aligned_cols=277  Identities=64%  Similarity=1.064  Sum_probs=266.7

Q ss_pred             cccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHhhhcHHHH
Q 047635          112 IDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEII  191 (388)
Q Consensus       112 ~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l~~~p~i~  191 (388)
                      ..+.+++++++|++||+||+..+++||+|++|+++.||+|++|+++|+++||+||.+..+++..|+++|.++|+.+|+++
T Consensus        18 ~~~~~~~~~~~w~~~~~ea~~~~~~ep~l~~~~~~~il~~~~~~~al~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   97 (294)
T PLN02694         18 ATTADEEAAWLWTQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNTFSSDPSLR   97 (294)
T ss_pred             CccccccchHHHHHHHHHHHHHHhcCccHHHHHHHHhcCCcCHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHCHHHH
Confidence            44556777889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEEcC
Q 047635          192 KAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDH  271 (388)
Q Consensus       192 ~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I~~  271 (388)
                      +.+.+|+.++.+|||+|..+..++++|+||++++.||++||+|..++..++.+++.++...++++||+++.||+|++|+|
T Consensus        98 ~~~~~D~~a~~~rdpa~~~~~~~~l~~~Gf~Al~~yR~ah~l~~~~~~~la~~~~~~~~~~~gvdI~p~A~IG~gv~Idh  177 (294)
T PLN02694         98 AATVADLRAARVRDPACVSFSHCLLNYKGFLACQAHRVAHKLWTQSRRPLALALHSRISDVFAVDIHPAAKIGKGILFDH  177 (294)
T ss_pred             HHHHHHHHHHHhcCccccchhhhhhcCHhHHHHHHHHHHHHHHHCCChhHHHHHHHhcccceeEEeCCcceecCCEEEeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEe
Q 047635          272 ATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG  351 (388)
Q Consensus       272 gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG  351 (388)
                      +++++||++++||+||+|+++|+||+.+...+.++++||++|+||+|++|+++++||++|+||+|++|++|||++++|+|
T Consensus       178 ~tGVVIGe~a~IGdnv~I~~~VtLGg~g~~~~~r~piIGd~V~IGagA~Ilggi~IGd~a~IGAgSVV~kdVP~~~~v~G  257 (294)
T PLN02694        178 ATGVVIGETAVIGNNVSILHHVTLGGTGKACGDRHPKIGDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPRTTAVG  257 (294)
T ss_pred             CCCeEECCCcEECCCCEEeecceeCCcccccCCCccEECCCeEECCeeEECCCCEECCCCEECCCCEECCcCCCCcEEEc
Confidence            99999999999999999999999999888778889999999999999999999999999999999999999999999999


Q ss_pred             cCcEEeccCCCCccccCCCCccccccccccccCCCcC
Q 047635          352 NPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDYVI  388 (388)
Q Consensus       352 ~PArvi~~~~~~~~~~~~p~~~~~~~~~~~~~~dy~~  388 (388)
                      +|||+++.+.++......|+++|||..++.+|+||+|
T Consensus       258 ~PAkiv~~~~~~~~~~~~p~~~m~~~~~~~~~~~~~~  294 (294)
T PLN02694        258 NPARLVGGKEKPAKHEECPGESMDHTSFISEWSDYII  294 (294)
T ss_pred             cCcEEEccCCCcccccCCcchhhcccccccccccccC
Confidence            9999999877666656789999999999999999997

>KOG4750 consensus Serine O-acetyltransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.9e-58  Score=424.06  Aligned_cols=255  Identities=63%  Similarity=0.948  Sum_probs=249.8

Q ss_pred             HHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHhhhcHHHHHHHHHHHHH
Q 047635          121 DLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIA  200 (388)
Q Consensus       121 ~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l~~~p~i~~~i~~Dl~a  200 (388)
                      ++|.+||+||+..++.||.+++|+++.|++|.++++++++.|+++|.+..++++.+.++|...+..+|.|++.+..|+.+
T Consensus        15 ~iw~kir~ea~~~~e~ep~ls~~ly~~Ils~~~le~~l~~~L~~~l~~~tl~s~~l~~lf~~~~~~d~~i~~s~~~dl~a   94 (269)
T KOG4750|consen   15 MIWTKIREEAKKDAEYEPILSSYLYASILSHLTLERALAFVLANRLNNTTLLSENLGDLFLSVLRADPLIRESVFDDLDA   94 (269)
T ss_pred             hhHHHHHHHHHhhhhhchhhhhhHHHHhccHhHHHHHhhHHHHHhhccccccHhhhhhHhHHHhccCHHHHHHHHHhhhh
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEEcCCCCcEECCC
Q 047635          201 IKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGET  280 (388)
Q Consensus       201 ~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~  280 (388)
                      ...|||+|.+|...++.++||+++|+||++|.+|.++++.++..++.+++..++|+|||.|.||+|..++|++|++||++
T Consensus        95 ~~~rdPac~dy~s~~l~~kgF~A~Qa~RiaH~Lw~~~rk~lal~~q~ris~~~gvdihpaa~ig~gilldhatgvvigeT  174 (269)
T KOG4750|consen   95 FKIRDPACIDYGSNILHGKGFLANQAYRIAHNLWTQDRKILALGLQVRISPNFGVDIHPAAKIGKGILLDHATGVVIGET  174 (269)
T ss_pred             hccCCcchhhhHHHhHhcccHhhhhHHHhhhhheecCCeeEEEeecceecccccccccchhhcccceeeccccceeecce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccC
Q 047635          281 AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGK  360 (388)
Q Consensus       281 ~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~  360 (388)
                      ++||++|+|+|++++|++++..+++||+|||||+||+|++|++||+||+|++|||||+|++|||++++++|+|||+++..
T Consensus       175 Avvg~~vSilH~Vtlggtgk~~gdrhP~Igd~vliGaGvtILgnV~IGegavIaAGsvV~kDVP~~~~AvGnPAklIg~~  254 (269)
T KOG4750|consen  175 AVVGDNVSILHPVTLGGTGKGSGDRHPKIGDNVLIGAGVTILGNVTIGEGAVIAAGSVVLKDVPPNTLAVGNPAKLIGKI  254 (269)
T ss_pred             eEeccceeeecceeeccccccccccCCcccCCeEEccccEEeCCeeECCCcEEeccceEEeccCCCceecCCchhhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999965


Q ss_pred             CCCccccCCCCccccccccc
Q 047635          361 ENPFMLDKIPSFTMDHTSHI  380 (388)
Q Consensus       361 ~~~~~~~~~p~~~~~~~~~~  380 (388)
                      .     ...|+++|+|.+|+
T Consensus       255 ~-----e~~p~ltm~~~~~~  269 (269)
T KOG4750|consen  255 D-----EKDPGLTMDHTSFI  269 (269)
T ss_pred             c-----ccCCcccccccccC
Confidence            4     56899999999874

>PLN02739 serine acetyltransferase

Probab=100.00  E-value=3.4e-55  Score=431.25  Aligned_cols=256  Identities=56%  Similarity=0.930  Sum_probs=247.3

Q ss_pred             CCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHhhhcHHHHHHHHH
Q 047635          117 DADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKA  196 (388)
Q Consensus       117 ~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l~~~p~i~~~i~~  196 (388)
                      ...+++|++||+||+..+++||+|++|+++.||+|++|+++|+++||+||.+..+++.+|++++.++|..+|++++.+.+
T Consensus        68 ~~~~~~W~~~r~ea~~~~~~ep~l~~~~~~~il~h~~~~~al~~~la~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (355)
T PLN02739         68 SRYDPIWDSIREEAKLEAEEEPVLSSFLYASILSHDCLEQALSFVLANRLQNPTLLATQLMDIFCNVMVHDRGIQSSIRL  147 (355)
T ss_pred             cccchHHHHHHHHHHHHHhcCchhHHHHHHHccCCccHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            34558999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEEcCCCCcE
Q 047635          197 DLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVV  276 (388)
Q Consensus       197 Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I~~gtgVv  276 (388)
                      |+.++.+|||+|..+..++++++||+++++||++||+|..++..++.+++.++...+|++|++++.||+|++|+|+++++
T Consensus       148 Dl~a~~~rDPA~~~~~~~~l~~~Gf~Al~~yRiah~l~~~~~~~la~~l~~~~~~~~GidI~p~A~IG~Gv~IdHg~GVV  227 (355)
T PLN02739        148 DVQAFKDRDPACLSYSSAILHLKGYLALQAYRVAHKLWKQGRKLLALALQSRVSEVFGIDIHPAARIGKGILLDHGTGVV  227 (355)
T ss_pred             HHHHHHccCccccCeeeeeeeCccHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHhCcccCCCccccCceEEecCCceE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEE
Q 047635          277 VGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARL  356 (388)
Q Consensus       277 IG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArv  356 (388)
                      ||++++||+||+|+++|+||+++...++++++|||+|+||+||+|+++++||++|+||+|++|++|||++++|+|+|||+
T Consensus       228 IG~~avIGdnv~I~~gVTIGg~g~~~g~r~p~IGd~V~IGagA~IlG~V~IGd~aiIGAGSVV~kDVP~~stvvG~PAri  307 (355)
T PLN02739        228 IGETAVIGDRVSILHGVTLGGTGKETGDRHPKIGDGALLGACVTILGNISIGAGAMVAAGSLVLKDVPSHSMVAGNPAKL  307 (355)
T ss_pred             ECCCCEECCCCEEcCCceeCCcCCcCCCCCcEECCCCEEcCCCEEeCCeEECCCCEECCCCEECCCCCCCcEEEecCCEE
Confidence            99999999999999999999988887888999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCccccCCCCcccccc
Q 047635          357 IGGKENPFMLDKIPSFTMDHT  377 (388)
Q Consensus       357 i~~~~~~~~~~~~p~~~~~~~  377 (388)
                      ++...     ...|+++|+++
T Consensus       308 I~~~~-----~~~p~~~m~~D  323 (355)
T PLN02739        308 IGFVD-----EQDPSLTMEYD  323 (355)
T ss_pred             eccCC-----ccchhhhhhhh
Confidence            98765     56899999875

>PRK11132 cysE serine acetyltransferase; Provisional

Probab=100.00  E-value=9.1e-52  Score=398.96  Aligned_cols=256  Identities=52%  Similarity=0.827  Sum_probs=246.4

Q ss_pred             CchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHhhhcHHHHHHHHHH
Q 047635          118 ADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKAD  197 (388)
Q Consensus       118 ~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l~~~p~i~~~i~~D  197 (388)
                      ..+++|++||+||+..+++||+|++|+++.||+|+.|+.+|+++|+++|.+..++...+++++.+++..+|++.+.+.+|
T Consensus         5 ~~~~~w~~~~~ea~~~~~~ep~l~~~~~~~~l~~~~~~~~L~~~l~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~D   84 (273)
T PRK11132          5 ELEIVWNNIKAEARALADCEPMLASFYHATLLKHENLGSALSYMLANKLASPIMPAIAIREVVEEAYAADPEMIASAACD   84 (273)
T ss_pred             cccHHHHHHHHHHHHHHhcCchhHHHHHHhccCCccHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            34579999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEEcCCCCcEE
Q 047635          198 LIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVV  277 (388)
Q Consensus       198 l~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I~~gtgVvI  277 (388)
                      +.+..+|||++.++..+++.++||++++.||+++|+|..++..++.+++..+...++++||+++.||+|++|+|+++++|
T Consensus        85 i~~~~~~dpa~~~~~~pll~~~gf~a~~~yR~a~~l~~~~~~~la~~~~~~~~~~~gidI~~~a~IG~g~~I~h~~givI  164 (273)
T PRK11132         85 IQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIYLQNQISVAFQVDIHPAAKIGRGIMLDHATGIVI  164 (273)
T ss_pred             HHHHHhcCccccceeEEEEECCChHHHHHHHHHHHHHHCCCchhhhhhhhcceeeeeeEecCcceECCCeEEcCCCCeEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEe
Q 047635          278 GETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI  357 (388)
Q Consensus       278 G~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi  357 (388)
                      |++++||+||+|+++|+||+++...+.++++||++|+||+||+|+++++||+||+||+|++|++|||++++++|+|||++
T Consensus       165 G~~a~IGdnv~I~~~VtiGg~~~~~~~~~p~IGd~V~IGaga~Ilggv~IG~~a~IGAgSvV~~dVp~~~~v~G~PArvi  244 (273)
T PRK11132        165 GETAVIENDVSILQSVTLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIV  244 (273)
T ss_pred             CCCCEECCCCEEcCCcEEecCcccCCCcCCEECCCcEEcCCCEEcCCCEECCCCEECCCCEECcccCCCcEEEecCcEEe
Confidence            99999999999999999999887777889999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCccccCCCCccccccc
Q 047635          358 GGKENPFMLDKIPSFTMDHTS  378 (388)
Q Consensus       358 ~~~~~~~~~~~~p~~~~~~~~  378 (388)
                      ++..     ...|+++|||..
T Consensus       245 ~~~~-----~~~p~~~m~~~~  260 (273)
T PRK11132        245 GKPE-----SDKPSMDMDQHF  260 (273)
T ss_pred             Cccc-----ccCchhhhhhhc
Confidence            8765     568999999975

>COG1045 CysE Serine acetyltransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=2e-42  Score=315.27  Aligned_cols=169  Identities=64%  Similarity=1.037  Sum_probs=165.4

Q ss_pred             HHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEEcCC
Q 047635          193 AVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHA  272 (388)
Q Consensus       193 ~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I~~g  272 (388)
                      .+.+|+.+.+++||++..+..++++|++|+++++||++|++|..+++.++++++...+..++++|||+|+||++++|+|+
T Consensus         6 ~~~~di~a~~~~dPa~~~~~~~~l~y~g~ha~~~~R~ah~l~~~~~~~~A~~~~~~~~~~~gieIhp~A~IG~g~fIdHg   85 (194)
T COG1045           6 SAREDIRAVRERDPAARSYLEVLLYYPGFHALWAHRLAHWLWNRGRKLLARLLSSLSRFLFGIEIHPGAKIGRGLFIDHG   85 (194)
T ss_pred             HHHHHHHHHhhcCccccchhHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcceeeCCCCeECCceEEcCC
Confidence            57789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEec
Q 047635          273 TGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGN  352 (388)
Q Consensus       273 tgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~  352 (388)
                      +|++||++++|||||+|++|||||+++...++|||+||+||+||+||+|+||++||+|+.|||||||++|||++++++|.
T Consensus        86 ~GvVIgeta~IGddv~I~~gVTLGgtg~~~g~RhPtIg~~V~IGagAkILG~I~IGd~akIGA~sVVlkdVP~~~tvvGv  165 (194)
T COG1045          86 TGVVIGETAVIGDDVTIYHGVTLGGTGKESGKRHPTIGNGVYIGAGAKILGNIEIGDNAKIGAGSVVLKDVPPNATVVGV  165 (194)
T ss_pred             ceEEEcceeEECCCeEEEcceEecCCCCcCCCCCCccCCCeEECCCCEEEcceEECCCCEECCCceEccCCCCCceEecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcEEeccCC
Q 047635          353 PARLIGGKE  361 (388)
Q Consensus       353 PArvi~~~~  361 (388)
                      |||++++..
T Consensus       166 PArii~~~~  174 (194)
T COG1045         166 PARVIGRPG  174 (194)
T ss_pred             cceEeccCC
Confidence            999998654

>TIGR01172 cysE serine O-acetyltransferase

Probab=99.97  E-value=2.2e-29  Score=226.58  Aligned_cols=161  Identities=60%  Similarity=0.993  Sum_probs=151.2

Q ss_pred             HHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEEcCCCC
Q 047635          195 KADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATG  274 (388)
Q Consensus       195 ~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I~~gtg  274 (388)
                      ..|+.++..+||++.+....++..++|+++..||++++++..+...++..+...+...++++|+++++||++++|+|+.+
T Consensus         2 ~~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~yR~~~~~~~~~~~~l~~~~~~~~~~~~~~~I~~~~~Ig~~~~i~~~~g   81 (162)
T TIGR01172         2 REDIRAVRERDPAARSYLEVLLYYPGFHALWAYRFAHYLWKRGFKFLARLLSNFIRVLTGVDIHPGARIGRGVFIDHGTG   81 (162)
T ss_pred             HHHHHHHHhCCcccCCeEEEEEECchHHHHHHHHHHHHHHHccHHHHHHHHHHHHheeeCeEeCCCCEECCCeEECCCCe
Confidence            57899999999999999999999999999999999999999888888888888888889999999999999999999888


Q ss_pred             cEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCc
Q 047635          275 VVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPA  354 (388)
Q Consensus       275 VvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PA  354 (388)
                      ++||++++||+||+|+++|+|++.....+.++++||++|+||++|+|.++++||++|+||++++|.+|||++++++|+||
T Consensus        82 ~~Ig~~~~IG~~~~I~~~v~ig~~~~~~~~~~~~Ig~~v~Ig~~a~I~~~v~IG~~~~Iga~s~V~~dvp~~~~~~G~Pa  161 (162)
T TIGR01172        82 VVIGETAVIGDDVTIYHGVTLGGTGKEKGKRHPTVGEGVMIGAGAKVLGNIEVGENAKIGANSVVLKDVPPGATVVGVPA  161 (162)
T ss_pred             EEECCCCEECCCCEEcCCCEECCCccccCCcCCEECCCcEEcCCCEEECCcEECCCCEECCCCEECCCCCCCCEEEeecC
Confidence            99999999999999999999998755555667999999999999999999999999999999999999999999999999


Q ss_pred             E
Q 047635          355 R  355 (388)
Q Consensus       355 r  355 (388)
                      |
T Consensus       162 r  162 (162)
T TIGR01172       162 R  162 (162)
T ss_pred             C
Confidence            6

Cysteine biosynthesis

>PF06426 SATase_N: Serine acetyltransferase, N-terminal ; InterPro: IPR010493 The N-terminal domain of serine acetyltransferase has a sequence that is conserved in plants [] and bacteria []

Probab=99.85  E-value=1e-21  Score=165.09  Aligned_cols=105  Identities=48%  Similarity=0.710  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHhhhcHHHHHHHHHHHHHH
Q 047635          122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIAI  201 (388)
Q Consensus       122 ~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l~~~p~i~~~i~~Dl~a~  201 (388)
                      ||++||+||+..+++||.|++|++..||+|++|+++|+++|+++|.+..++...+.+++.++++.+|+|.+.+..|+.++
T Consensus         1 ~W~~lr~EA~~~~~~eP~La~~l~~~iL~h~s~~~ALa~~La~kL~~~~~~~~~l~~~~~~~~~~~p~i~~~~~~Dl~Av   80 (105)
T PF06426_consen    1 LWQQLRAEAEEAAASEPLLASFLHATILSHDSFEDALAFRLANKLADPTLSADQLRDLFRDALEADPEIVEAARADLQAV   80 (105)
T ss_dssp             HHHHHHHHHHHHHHH-GGGHHHHHHHTTTSSSHHHHHHHHHHHHH-BTTS-HHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCchHHHHHHHHhhcccCHHHHHHHHHHHhcCccccCHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCccccccceeeeccchhHHHHH
Q 047635          202 KERDPACISYAHCLLNFKGFLACQA  226 (388)
Q Consensus       202 ~~rDPa~~~~~~~ll~~~gf~al~~  226 (388)
                      ++|||+|.++..++++||||++++.
T Consensus        81 ~~RDPA~~~~~~~lL~~kGF~AlQa  105 (105)
T PF06426_consen   81 YERDPACPSYLEPLLFFKGFHALQA  105 (105)
T ss_dssp             HHHSTT--STHHHHHH-HHHHHHHH
T ss_pred             HhCCccccchhHHHHHCccHHHhcC
Confidence            9999999999999999999999874

; GO: 0009001 serine O-acetyltransferase activity, 0006535 cysteine biosynthetic process from serine, 0005737 cytoplasm; PDB: 1T3D_C 3MC4_B 3P47_A 3P1B_A 3Q1X_A 1SSM_A 1S80_C 1SSQ_D 1SST_A 3GVD_L ....

>PRK10191 putative acyl transferase; Provisional

Probab=99.82  E-value=1.6e-19  Score=160.36  Aligned_cols=107  Identities=42%  Similarity=0.693  Sum_probs=98.5

Q ss_pred             ceeeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECC
Q 047635          250 SEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGD  329 (388)
Q Consensus       250 ~~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd  329 (388)
                      ...+|++|++++.||+++.|+++.+++|++++.||+||+|+++|+||+.+.... ..++|||+|+||++++|.++++||+
T Consensus        37 ~~~~g~~I~~~a~Ig~~~~I~~g~~i~I~~~~~IGd~~~I~h~v~IG~~~~~~~-~~~~IGd~~~Ig~~~~I~~~v~IG~  115 (146)
T PRK10191         37 ECFFGYEIQAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRGADNM-ACPHIGNGVELGANVIILGDITIGN  115 (146)
T ss_pred             HHHhCcccCCCCEECCCeEECCCCeEEECCCcEECCCCEECCCCEECCCCcCCC-CCCEECCCcEEcCCCEEeCCCEECC
Confidence            347899999999999999999999999999999999999999999997644322 3579999999999999999999999


Q ss_pred             CCEECCCCEECCCCCCCcEEEecCcEEe
Q 047635          330 GAKIGAGSVVLKDVPPRTTAVGNPARLI  357 (388)
Q Consensus       330 ~v~IGagsVV~~dVp~~s~VvG~PArvi  357 (388)
                      +++||+|++|.+|+|++++++|.|||+.
T Consensus       116 ~~~Igags~V~~dv~~~~~v~G~pA~~~  143 (146)
T PRK10191        116 NVTVGAGSVVLDSVPDNALVVGEKARVK  143 (146)
T ss_pred             CCEECCCCEECCccCCCcEEEccCcEEE
Confidence            9999999999999999999999999875

>COG1045 CysE Serine acetyltransferase [Amino acid transport and metabolism]

Probab=99.79  E-value=5.9e-19  Score=161.49  Aligned_cols=146  Identities=23%  Similarity=0.256  Sum_probs=114.8

Q ss_pred             HHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCccc--chHHHHHHHHHHhhhcHHHHHHHHHHHH
Q 047635          122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSL--QSGTLFELFMGVIVEDQEIIKAVKADLI  199 (388)
Q Consensus       122 ~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~--~~~~l~~~~~~~l~~~p~i~~~i~~Dl~  199 (388)
                      ++..+++|+++.+++||++.++++ .+|.+++|++.++||++|.|++..+  .+..+..+.+                +.
T Consensus         3 ~~~~~~~di~a~~~~dPa~~~~~~-~~l~y~g~ha~~~~R~ah~l~~~~~~~~A~~~~~~~~----------------~~   65 (194)
T COG1045           3 MLGSAREDIRAVRERDPAARSYLE-VLLYYPGFHALWAHRLAHWLWNRGRKLLARLLSSLSR----------------FL   65 (194)
T ss_pred             hHHHHHHHHHHHhhcCccccchhH-HHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH----------------hh
Confidence            455889999999999999999876 8999999999999999999987522  1121222211                12


Q ss_pred             HHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEEcCCCCcEECC
Q 047635          200 AIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGE  279 (388)
Q Consensus       200 a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~  279 (388)
                      .-.+.+|++......                                 .+.+..|++||++|.||++|.|.|  +++||.
T Consensus        66 ~gieIhp~A~IG~g~---------------------------------fIdHg~GvVIgeta~IGddv~I~~--gVTLGg  110 (194)
T COG1045          66 FGIEIHPGAKIGRGL---------------------------------FIDHGTGVVIGETAVIGDDVTIYH--GVTLGG  110 (194)
T ss_pred             cceeeCCCCeECCce---------------------------------EEcCCceEEEcceeEECCCeEEEc--ceEecC
Confidence            234455655333222                                 235577999999999999999999  999998


Q ss_pred             C--------cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEE
Q 047635          280 T--------AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKI  327 (388)
Q Consensus       280 ~--------~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~I  327 (388)
                      +        .+||+||+||.|++|.+        +++||||+.||+||+|+.+|--
T Consensus       111 tg~~~g~RhPtIg~~V~IGagAkILG--------~I~IGd~akIGA~sVVlkdVP~  158 (194)
T COG1045         111 TGKESGKRHPTIGNGVYIGAGAKILG--------NIEIGDNAKIGAGSVVLKDVPP  158 (194)
T ss_pred             CCCcCCCCCCccCCCeEECCCCEEEc--------ceEECCCCEECCCceEccCCCC
Confidence            6        59999999999999987        7999999999999999998543

>PRK10502 putative acyl transferase; Provisional

Probab=99.78  E-value=4.2e-18  Score=156.05  Aligned_cols=57  Identities=35%  Similarity=0.514  Sum_probs=54.2

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                      .+++|||+|+||++|+|.++++||++++||++++|.+|+|++++++|+|||+++++.
T Consensus       123 ~~i~Igd~~~Ig~~a~I~~Gv~Ig~~~vIga~svV~~~v~~~~v~~G~Pa~~ik~r~  179 (182)
T PRK10502        123 APIVIGEGCWLAADVFVAPGVTIGSGAVVGARSSVFKSLPANTICRGNPAVPIRPRV  179 (182)
T ss_pred             CCEEEcCCcEEcCCCEEcCCCEECCCCEECCCCEEecccCCCcEEECCcceEecccc
Confidence            457999999999999999999999999999999999999999999999999998764

>PRK10092 maltose O-acetyltransferase; Provisional

Probab=99.77  E-value=4.1e-18  Score=156.55  Aligned_cols=106  Identities=29%  Similarity=0.423  Sum_probs=84.6

Q ss_pred             eeeeEecCCcEECCceEEcCCCCcEECCCc--EECCCcEEcCCCEECCCCccC----------CCCCCEECCCcEEccCC
Q 047635          252 VFSVDIHPGAKIGRGLLFDHATGVVVGETA--VIGDNVSILHNVTLGGTGKMS----------GDRHPKIGNGVLVGAGT  319 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~--~IGdnV~Ig~gvtIgg~~~i~----------g~~~~~IGd~V~IGaga  319 (388)
                      .+.+++|.+..||++++|+.  +++|++.+  +||++|.|+++|+|....+..          -..+++||++|+||++|
T Consensus        65 ~~~~~~g~~i~iG~~~~in~--~~~i~d~~~I~IGd~v~I~~~v~i~t~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a  142 (183)
T PRK10092         65 TFRCDYGYNIFLGNNFYANF--DCVMLDVCPIRIGDNCMLAPGVHIYTATHPLDPVARNSGAELGKPVTIGNNVWIGGRA  142 (183)
T ss_pred             CEEEeecCCcEEcCCcEECC--ceEEecCceEEECCCCEECCCCEEEcCCCCCChHHccccceecCCeEECCCcEECCCC
Confidence            45566777777777777766  66666654  677777777777775322211          12468999999999999


Q ss_pred             EECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          320 CILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       320 ~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      +|.++++||++|+||+|++|.+|||++++++|+|||++++
T Consensus       143 ~I~~gv~IG~~~vIgagsvV~~di~~~~i~~G~PAr~i~~  182 (183)
T PRK10092        143 VINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARIIKK  182 (183)
T ss_pred             EECCCCEECCCCEECCCCEEccccCCCcEEEecCcEEeec
Confidence            9999999999999999999999999999999999999874

>PLN02694 serine O-acetyltransferase

Probab=99.77  E-value=1.1e-18  Score=169.74  Aligned_cols=175  Identities=22%  Similarity=0.218  Sum_probs=129.9

Q ss_pred             ccCcccccccccccccccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCccc--chH
Q 047635           97 PFNRNQEQAIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSL--QSG  174 (388)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~--~~~  174 (388)
                      -+.....+....++++.++....+.+++.+++|+++..++||++.++++ .+|.+++|++.++||+||+||....  ++.
T Consensus        71 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~a~~~rdpa~~~~~~-~~l~~~Gf~Al~~yR~ah~l~~~~~~~la~  149 (294)
T PLN02694         71 KLCSSTLLSTLLYDLFLNTFSSDPSLRAATVADLRAARVRDPACVSFSH-CLLNYKGFLACQAHRVAHKLWTQSRRPLAL  149 (294)
T ss_pred             HhCCCcCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHhcCccccchhh-hhhcCHhHHHHHHHHHHHHHHHCCChhHHH
Confidence            3444455555677778888889999999999999999999999999988 8999999999999999999997533  111


Q ss_pred             HHHHHHHHHhhhcHHHHHHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeee
Q 047635          175 TLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFS  254 (388)
Q Consensus       175 ~l~~~~~~~l~~~p~i~~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~g  254 (388)
                      .++..+...+                -.+.+|.+......+                                 +....+
T Consensus       150 ~~~~~~~~~~----------------gvdI~p~A~IG~gv~---------------------------------Idh~tG  180 (294)
T PLN02694        150 ALHSRISDVF----------------AVDIHPAAKIGKGIL---------------------------------FDHATG  180 (294)
T ss_pred             HHHHhcccce----------------eEEeCCcceecCCEE---------------------------------EeCCCC
Confidence            1222111100                112333332211111                                 222357


Q ss_pred             eEecCCcEECCceEEcCCCCcEECC--------CcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcE
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGE--------TAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIK  326 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~--------~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~  326 (388)
                      ++||+++.||++|.|.+  ++++|.        +++||++|.||.|++|.+        +++||++|.||+|++|.++  
T Consensus       181 VVIGe~a~IGdnv~I~~--~VtLGg~g~~~~~r~piIGd~V~IGagA~Ilg--------gi~IGd~a~IGAgSVV~kd--  248 (294)
T PLN02694        181 VVIGETAVIGNNVSILH--HVTLGGTGKACGDRHPKIGDGVLIGAGATILG--------NVKIGEGAKIGAGSVVLID--  248 (294)
T ss_pred             eEECCCcEECCCCEEee--cceeCCcccccCCCccEECCCeEECCeeEECC--------CCEECCCCEECCCCEECCc--
Confidence            99999999999999998  889985        479999999999999976        6899999999999999986  


Q ss_pred             ECCCCEE
Q 047635          327 IGDGAKI  333 (388)
Q Consensus       327 IGd~v~I  333 (388)
                      |.+++++
T Consensus       249 VP~~~~v  255 (294)
T PLN02694        249 VPPRTTA  255 (294)
T ss_pred             CCCCcEE
Confidence            5555544

>PLN02739 serine acetyltransferase

Probab=99.77  E-value=3.6e-18  Score=169.21  Aligned_cols=184  Identities=20%  Similarity=0.153  Sum_probs=135.3

Q ss_pred             ccCcccccccccccccccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCccc--chH
Q 047635           97 PFNRNQEQAIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSL--QSG  174 (388)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~--~~~  174 (388)
                      -+.....+....++.+.++....+.||+.+++|+++..++||+..++++ .+|.+++|++.+.||+||+||....  ++.
T Consensus       116 kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~a~~~rDPA~~~~~~-~~l~~~Gf~Al~~yRiah~l~~~~~~~la~  194 (355)
T PLN02739        116 RLQNPTLLATQLMDIFCNVMVHDRGIQSSIRLDVQAFKDRDPACLSYSS-AILHLKGYLALQAYRVAHKLWKQGRKLLAL  194 (355)
T ss_pred             HhCCCcCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHccCccccCeee-eeeeCccHHHHHHHHHHHHHHHCCChHHHH
Confidence            3444555556667778888888899999999999999999999999987 8899999999999999999986432  122


Q ss_pred             HHHHHHHHHhhhcHHHHHHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeee
Q 047635          175 TLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFS  254 (388)
Q Consensus       175 ~l~~~~~~~l~~~p~i~~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~g  254 (388)
                      .|+..+..                ..-.+..|.+......                                 .+.+..+
T Consensus       195 ~l~~~~~~----------------~~GidI~p~A~IG~Gv---------------------------------~IdHg~G  225 (355)
T PLN02739        195 ALQSRVSE----------------VFGIDIHPAARIGKGI---------------------------------LLDHGTG  225 (355)
T ss_pred             HHHHHHHH----------------HhCcccCCCccccCce---------------------------------EEecCCc
Confidence            22221111                1112223333211111                                 1223458


Q ss_pred             eEecCCcEECCceEEcCCCCcEECC--------CcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcE
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGE--------TAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIK  326 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~--------~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~  326 (388)
                      ++||++++||++|.|.+  +++||.        .++||++|.||.|++|.+        +++||+++.||+|++|.++  
T Consensus       226 VVIG~~avIGdnv~I~~--gVTIGg~g~~~g~r~p~IGd~V~IGagA~IlG--------~V~IGd~aiIGAGSVV~kD--  293 (355)
T PLN02739        226 VVIGETAVIGDRVSILH--GVTLGGTGKETGDRHPKIGDGALLGACVTILG--------NISIGAGAMVAAGSLVLKD--  293 (355)
T ss_pred             eEECCCCEECCCCEEcC--CceeCCcCCcCCCCCcEECCCCEEcCCCEEeC--------CeEECCCCEECCCCEECCC--
Confidence            99999999999999998  899985        489999999999999977        7999999999999999987  


Q ss_pred             ECCCC-EECCCCEECCC
Q 047635          327 IGDGA-KIGAGSVVLKD  342 (388)
Q Consensus       327 IGd~v-~IGagsVV~~d  342 (388)
                      |.+++ ++|.-+.+.+.
T Consensus       294 VP~~stvvG~PAriI~~  310 (355)
T PLN02739        294 VPSHSMVAGNPAKLIGF  310 (355)
T ss_pred             CCCCcEEEecCCEEecc
Confidence            45555 44555555444

>PRK09527 lacA galactoside O-acetyltransferase; Reviewed

Probab=99.77  E-value=4.5e-18  Score=158.67  Aligned_cols=108  Identities=38%  Similarity=0.520  Sum_probs=86.2

Q ss_pred             eeeeEecCCcEECCceEEcCCCCcEE--CCCcEECCCcEEcCCCEECCCCcc----------CCCCCCEECCCcEEccCC
Q 047635          252 VFSVDIHPGAKIGRGLLFDHATGVVV--GETAVIGDNVSILHNVTLGGTGKM----------SGDRHPKIGNGVLVGAGT  319 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gtgVvI--G~~~~IGdnV~Ig~gvtIgg~~~i----------~g~~~~~IGd~V~IGaga  319 (388)
                      .+.++.|.++.||++++|+.  +++|  +..+.||++|.|+++|+|...+..          ...+.++||++|+||+++
T Consensus        67 ~~~~~~g~ni~IG~~v~In~--~~~I~d~~~I~IGd~v~Ig~~v~I~~~~h~~~~~~r~~g~~~~~pi~IGd~v~IG~~~  144 (203)
T PRK09527         67 PVYFSYGSNIHIGRNFYANF--NLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHV  144 (203)
T ss_pred             CEEEeeCCCcEEcCCcEECC--CcEEecCCCEEECCCCEECCCCEEEeCCCCCChhhccccccccCCeEECCCcEECCCC
Confidence            34455677788888888876  5555  334777888888888877643221          112358999999999999


Q ss_pred             EECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          320 CILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       320 ~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                      +|.++++||++|+||+||+|.+|||++++++|+|||++++..
T Consensus       145 ~I~~gv~IG~~~vIgagsvV~kdvp~~~v~~G~PAk~i~~~~  186 (203)
T PRK09527        145 VINPGVTIGDNSVIGAGSVVTKDIPPNVVAAGVPCRVIREIN  186 (203)
T ss_pred             EEcCCCEECCCCEECCCCEEcccCCCCcEEEeeCCEEeccCC
Confidence            999999999999999999999999999999999999998764

>cd03357 LbH_MAT_GAT Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates

Probab=99.74  E-value=1.5e-17  Score=150.39  Aligned_cols=104  Identities=34%  Similarity=0.493  Sum_probs=71.2

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECC---C-CccCCCCCCEECCCcEEccCCEECCCcEECC
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGG---T-GKMSGDRHPKIGNGVLVGAGTCILGNIKIGD  329 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg---~-~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd  329 (388)
                      ++.||+++.|+.++.|....+++||+++.||++|+|..+..-..   . .......+++||++|+||++|+|+++++||+
T Consensus        62 ~i~IG~~v~I~~~~~i~~~~~i~IG~~v~Ig~~~~I~~~~h~~~~~~~~~~~~~~~~v~IG~~~~Ig~~a~I~~gv~Ig~  141 (169)
T cd03357          62 NIHIGDNFYANFNCTILDVAPVTIGDNVLIGPNVQIYTAGHPLDPEERNRGLEYAKPITIGDNVWIGGGVIILPGVTIGD  141 (169)
T ss_pred             cCEECCCceEcCCEEEeccCcEEECCCCEECCCCEEEeCCCCCChhHccccceecCCcEeCCCEEECCCCEEeCCCEECC
Confidence            34455555555555444333455555555555555532211000   0 0001123689999999999999999999999


Q ss_pred             CCEECCCCEECCCCCCCcEEEecCcEEe
Q 047635          330 GAKIGAGSVVLKDVPPRTTAVGNPARLI  357 (388)
Q Consensus       330 ~v~IGagsVV~~dVp~~s~VvG~PArvi  357 (388)
                      +|+||+||+|.+|||++++++|+|||++
T Consensus       142 ~~~VgagavV~~~vp~~~vv~G~PAkvi  169 (169)
T cd03357         142 NSVIGAGSVVTKDIPANVVAAGNPARVI  169 (169)
T ss_pred             CCEECCCCEEccccCCCcEEEccccEEC
Confidence            9999999999999999999999999985

MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).

>COG0110 WbbJ Acetyltransferase (isoleucine patch superfamily) [General function prediction only]

Probab=99.72  E-value=2.4e-17  Score=150.12  Aligned_cols=104  Identities=42%  Similarity=0.613  Sum_probs=76.6

Q ss_pred             CCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCcc-----------CCCCCCEECCCcEEccCCEECCCcEE
Q 047635          259 PGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM-----------SGDRHPKIGNGVLVGAGTCILGNIKI  327 (388)
Q Consensus       259 ~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i-----------~g~~~~~IGd~V~IGaga~Ilg~V~I  327 (388)
                      ....+|+++.+..+..+..++..+||+++.++++|+|...+..           .....++||++||||+||+|+++|+|
T Consensus        66 ~~~~iG~~~~i~~~~~~~~~~~i~ig~~~~i~~~v~i~~~~h~~~~~~~~~~~~~~~~~v~IG~~vwIG~~a~IlpGV~I  145 (190)
T COG0110          66 KNLTIGDLCFIGVNVVILVGEGITIGDNVVVGPNVTIYTNSHPGDFVTANIGALVGAGPVTIGEDVWIGAGAVILPGVTI  145 (190)
T ss_pred             cceEECCeeEEcCCcEEEecCCeEECCCceECCCcEEecCCCCCChhhcccCCceecCCeEECCCeEEcCccEECCCEEE
Confidence            4555555555555443344455555555555555555442221           11346999999999999999999999


Q ss_pred             CCCCEECCCCEECCCCCCCcEEEecCcEEeccCCC
Q 047635          328 GDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       328 Gd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~  362 (388)
                      |+|++||+||||++|+|++++++|+|||+++++..
T Consensus       146 G~gavigagsVVtkdvp~~~iv~G~Pa~vir~~~~  180 (190)
T COG0110         146 GEGAVIGAGSVVTKDVPPYGIVAGNPARVIRKRDV  180 (190)
T ss_pred             CCCcEEeeCCEEeCccCCCeEEeCCcceEEEecch
Confidence            99999999999999999999999999999987654

>cd05825 LbH_wcaF_like wcaF-like: This group is composed of the protein product of the E

Probab=99.72  E-value=6.9e-17  Score=135.40  Aligned_cols=105  Identities=28%  Similarity=0.379  Sum_probs=84.5

Q ss_pred             eeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEEC-CCCccCCCCCCEECCCcEEccCCEECCCcEECCCC
Q 047635          253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLG-GTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGA  331 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIg-g~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v  331 (388)
                      +.+.||+++.|++++.|.....++||+++.|+++|+|..+.+-. ..........++||++|+||+++.|.++++||++|
T Consensus         2 ~~i~iG~~~~I~~~~~i~~~~~i~IG~~~~I~~~~~I~~~~h~~~~~~~~~~~~~v~Ig~~~~ig~~~~i~~g~~Ig~~~   81 (107)
T cd05825           2 WNLTIGDNSWIGEGVWIYNLAPVTIGSDACISQGAYLCTGSHDYRSPAFPLITAPIVIGDGAWVAAEAFVGPGVTIGEGA   81 (107)
T ss_pred             ceEEECCCCEECCCCEEeeCCceEECCCCEECCCeEeecCCCCCCcCccceecCCEEECCCCEECCCCEECCCCEECCCC
Confidence            46789999999999999865578888888888888775432110 00001112468999999999999999999999999


Q ss_pred             EECCCCEECCCCCCCcEEEecCcEEe
Q 047635          332 KIGAGSVVLKDVPPRTTAVGNPARLI  357 (388)
Q Consensus       332 ~IGagsVV~~dVp~~s~VvG~PArvi  357 (388)
                      +||++++|.+|+|++++++|+|||++
T Consensus        82 ~i~~gs~v~~~~~~~~~~~G~Pa~~~  107 (107)
T cd05825          82 VVGARSVVVRDLPAWTVYAGNPAVPV  107 (107)
T ss_pred             EECCCCEEeCcCCCCCEEECCccEeC
Confidence            99999999999999999999999974

coli wcaF gene and similar proteins. WcaF is part of the gene cluster responsible for the biosynthesis of the extracellular polysaccharide colanic acid. The wcaF protein is predicted to contain a left-handed parallel beta-helix (LbH) domain encoded by imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Many are trimeric in their active forms.

>PRK09677 putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ; Provisional

Probab=99.72  E-value=1.7e-16  Score=146.57  Aligned_cols=56  Identities=39%  Similarity=0.648  Sum_probs=53.9

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                      .++||++|+||++++|.++++||++|+||++++|.+++|++++++|+||++++++.
T Consensus       130 ~v~Ig~~~~ig~~~~i~~g~~Ig~~~~Iga~s~v~~~i~~~~~~~G~Pa~~ik~~~  185 (192)
T PRK09677        130 AVVIGQRVWIGENVTILPGVSIGNGCIVGANSVVTKSIPENTVIAGNPAKIIKKYN  185 (192)
T ss_pred             CeEEcCCcEECCCCEEcCCCEECCCCEECCCCEECcccCCCcEEEecCCEEEeccC
Confidence            47899999999999999999999999999999999999999999999999998765

>cd03349 LbH_XAT Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others

Probab=99.69  E-value=1.4e-16  Score=141.24  Aligned_cols=106  Identities=30%  Similarity=0.378  Sum_probs=83.6

Q ss_pred             eEecCCcEECC-ceEEcCCCCcEECCCcEECCCcEEcCC-CEECC-----------CC--------ccCCCCCCEECCCc
Q 047635          255 VDIHPGAKIGR-GLLFDHATGVVVGETAVIGDNVSILHN-VTLGG-----------TG--------KMSGDRHPKIGNGV  313 (388)
Q Consensus       255 V~Ig~~a~IG~-gv~I~~gtgVvIG~~~~IGdnV~Ig~g-vtIgg-----------~~--------~i~g~~~~~IGd~V  313 (388)
                      +.||.++.|+. ++.+.. ..++||++|.||.+|.|..+ .+-..           ..        ......+++||++|
T Consensus         2 ~~iG~~s~i~~~~~~~~~-~~i~IG~~~~I~~~v~i~~~~~H~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~   80 (145)
T cd03349           2 ISVGDYSYGSGPDCDVGG-DKLSIGKFCSIAPGVKIGLGGNHPTDWVSTYPFYIFGGEWEDDAKFDDWPSKGDVIIGNDV   80 (145)
T ss_pred             EEEeCceeeCCCCceEeC-CCeEECCCCEECCCCEECCCCCCCCCCccccceEeeccccccccccccccccCCcEECCCC
Confidence            56888888888 555553 46888888888888888665 21110           00        01113468999999


Q ss_pred             EEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          314 LVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       314 ~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                      +||++++|+++++||++|+||++++|.+|+|++++++|+||++++++.
T Consensus        81 ~Ig~~~~i~~gv~Ig~~~vIgags~V~~~v~~~~v~~G~Pa~~i~~~~  128 (145)
T cd03349          81 WIGHGATILPGVTIGDGAVIAAGAVVTKDVPPYAIVGGNPAKVIRYRF  128 (145)
T ss_pred             EECCCCEEeCCCEECCCCEECCCCEEccccCCCeEEEecCCEeehhhC
Confidence            999999999999999999999999999999999999999999998654

Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.

>cd03354 LbH_SAT Serine acetyltransferase (SAT): SAT catalyzes the CoA-dependent acetylation of the side chain hydroxyl group of L-serine to form O-acetylserine, as the first step of a two-step biosynthetic pathway in bacteria and plants leading to the formation of L-cysteine

Probab=99.69  E-value=3.8e-16  Score=129.12  Aligned_cols=100  Identities=65%  Similarity=1.088  Sum_probs=93.1

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEE
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI  333 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~I  333 (388)
                      |+.|+++++||++++|+++.+++||+++.||++|.|++++.|+........++++||++++|+.++.+.++++||++|+|
T Consensus         2 ~~~i~~~~~ig~~~~i~~~~~~~ig~~~~Ig~~~~i~~~~~i~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~i   81 (101)
T cd03354           2 GIDIHPGAKIGPGLFIDHGTGIVIGETAVIGDNCTIYQGVTLGGKGKGGGKRHPTIGDNVVIGAGAKILGNITIGDNVKI   81 (101)
T ss_pred             ceEeCCCCEECCCEEECCCCeEEECCCCEECCCCEEcCCCEECCCccCCcCCCCEECCCcEEcCCCEEECcCEECCCCEE
Confidence            68899999999999999877899999999999999999999998776434457899999999999999999999999999


Q ss_pred             CCCCEECCCCCCCcEEEecC
Q 047635          334 GAGSVVLKDVPPRTTAVGNP  353 (388)
Q Consensus       334 GagsVV~~dVp~~s~VvG~P  353 (388)
                      +++++|.+++|++.++.|+|
T Consensus        82 ~~~~~i~~~~~~~~~~~G~P  101 (101)
T cd03354          82 GANAVVTKDVPANSTVVGVP  101 (101)
T ss_pred             CCCCEECcccCCCCEEEeCC
Confidence            99999999999999999998

This reaction represents a key metabolic point of regulation for the cysteine biosynthetic pathway due to its feedback inhibition by cysteine. The enzyme is a 175 kDa homohexamer, composed of a dimer of homotrimers. Each subunit contains an N-terminal alpha helical region and a C-terminal left-handed beta-helix (LbH) subdomain with 5 turns, each containing a hexapeptide repeat motif characteristic of the acyltransferase superfamily of enzymes. The trimer interface mainly involves the C-terminal LbH subdomain while the dimer (of trimers) interface is mediated by the N-terminal alpha helical subdomain.

>TIGR03532 DapD_Ac 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase

Probab=99.69  E-value=1.7e-16  Score=150.85  Aligned_cols=57  Identities=39%  Similarity=0.712  Sum_probs=54.6

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCCC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~  362 (388)
                      .++||++|+||++++|..+++||++++|++|++|.+|+|++++++|+|||+++++..
T Consensus       160 ~v~IGd~v~IG~gsvI~~g~~Ig~~~~IgagsvV~~di~~~~vv~G~PA~~i~~~~~  216 (231)
T TIGR03532       160 PVVIEDNVLIGANAVILEGVRVGKGAVVAAGAIVTEDVPPNTVVAGVPAKVIKQVDE  216 (231)
T ss_pred             CeEECCCcEECCCCEEcCCCEECCCCEECCCCEEccccCCCcEEEecCCEEeccCCh
Confidence            579999999999999999999999999999999999999999999999999998764

Alternate name: tetrahydrodipicolinate N-acetyltransferase. Note that IUBMB lists this alternate name as the accepted name. Unfortunately, the related succinyl transferase acting on the same substrate (EC:2.3.1.117, TIGR00695) uses the opposite standard. We have decided to give these two enzymes names which more clearly indicated that they act on the same substrate.

>cd03358 LbH_WxcM_N_like WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain

Probab=99.68  E-value=3.3e-16  Score=132.02  Aligned_cols=104  Identities=38%  Similarity=0.503  Sum_probs=83.3

Q ss_pred             eeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccC-------CCCCCEECCCcEEccCCEECCCc
Q 047635          253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMS-------GDRHPKIGNGVLVGAGTCILGNI  325 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~-------g~~~~~IGd~V~IGaga~Ilg~V  325 (388)
                      .++.|++++.||+++.|+.  ++.|+++++||++|.|++++.+.+.....       ...+++||++|+||++++|..++
T Consensus         9 ~~~~i~~~~~Ig~~~~I~~--~~~i~~~~~Ig~~~~I~~~~~i~~~~~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~v~~~~   86 (119)
T cd03358           9 TNVFIENDVKIGDNVKIQS--NVSIYEGVTIEDDVFIGPNVVFTNDLYPRSKIYRKWELKGTTVKRGASIGANATILPGV   86 (119)
T ss_pred             CCcEECCCcEECCCcEECC--CcEEeCCeEECCCcEEcCCeEEecCCCCccccccccccCCcEECCCcEECcCCEEeCCc
Confidence            3455677777777777765  67777777777777777777775421111       12468999999999999999999


Q ss_pred             EECCCCEECCCCEECCCCCCCcEEEecCcEEec
Q 047635          326 KIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG  358 (388)
Q Consensus       326 ~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~  358 (388)
                      .||+++.|+++++|.+++|+++++.|+|||+++
T Consensus        87 ~ig~~~~i~~~~~v~~~i~~~~~~~G~pa~~~~  119 (119)
T cd03358          87 TIGEYALVGAGAVVTKDVPPYALVVGNPARIIG  119 (119)
T ss_pred             EECCCCEEccCCEEeCcCCCCeEEecCcceecC
Confidence            999999999999999999999999999999864

WcxM is thought to be bifunctional, catalyzing both the isomerization and transacetylation reactions of keto-hexoses. It contains an N-terminal LbH domain responsible for the transacetylation function and a C-terminal isomerase domain. The LbH domain contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), typical of enzymes with acyltransferase activity.

>PLN02357 serine acetyltransferase

Probab=99.68  E-value=1.8e-16  Score=158.21  Aligned_cols=181  Identities=19%  Similarity=0.215  Sum_probs=130.4

Q ss_pred             cCcccccccccccccccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCccc--chHH
Q 047635           98 FNRNQEQAIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSL--QSGT  175 (388)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~--~~~~  175 (388)
                      +.....+....++.+.++...++++++.++.|+++..++||+..+|++ .+|.+++|++.++||+||+||....  .+..
T Consensus       138 l~~~~~~~~~~~el~~~aL~~DpdI~e~IraDLaAI~eRDPAciSFL~-~~l~~kGf~al~~~Riah~l~~~~~~~la~~  216 (360)
T PLN02357        138 LSNLNLPSNTLFDLFIGVLEESPEIIESVKQDLRAVKERDPACISYVH-CFLNFKGFLACQAHRIAHKLWTQGRKILALL  216 (360)
T ss_pred             hCCccCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHccCcchhhhhH-HHhhCHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            444455555556666677777889999999999999999999999997 7899999999999999999996532  1111


Q ss_pred             HHHHHHHHhhhcHHHHHHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeee
Q 047635          176 LFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSV  255 (388)
Q Consensus       176 l~~~~~~~l~~~p~i~~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV  255 (388)
                      ++..+..                ....+..|.+......+                                 +....++
T Consensus       217 i~~~~~~----------------~f~vdI~p~a~IG~Gv~---------------------------------Idh~~gi  247 (360)
T PLN02357        217 IQNRVSE----------------AFAVDIHPGAKIGQGIL---------------------------------LDHATGV  247 (360)
T ss_pred             HHHHHHH----------------HhceeeCCCCEECCCeE---------------------------------ECCCCce
Confidence            1111111                11123334432221111                                 1223478


Q ss_pred             EecCCcEECCceEEcCCCCcEECCC--------cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEE
Q 047635          256 DIHPGAKIGRGLLFDHATGVVVGET--------AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKI  327 (388)
Q Consensus       256 ~Ig~~a~IG~gv~I~~gtgVvIG~~--------~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~I  327 (388)
                      .||++++||++|.|.+  +++||..        ++||++|.||.|++|.+        +++||+++.||+|++|.++  |
T Consensus       248 VIGe~avIGdnV~I~~--gVtIGg~g~~~g~~~piIGd~V~IGagA~Ilg--------gV~IGdga~IGAgSVV~~d--V  315 (360)
T PLN02357        248 VIGETAVVGNNVSILH--NVTLGGTGKQSGDRHPKIGDGVLIGAGTCILG--------NITIGEGAKIGAGSVVLKD--V  315 (360)
T ss_pred             EECCCCEECCCCEEeC--CceecCccccCCccCceeCCCeEECCceEEEC--------CeEECCCCEECCCCEECcc--c
Confidence            8999999999999998  8999864        88999999999998865        6899999999999999987  3


Q ss_pred             CCCC-EECCCCEEC
Q 047635          328 GDGA-KIGAGSVVL  340 (388)
Q Consensus       328 Gd~v-~IGagsVV~  340 (388)
                      .+++ ++|.-+.+.
T Consensus       316 P~~~~v~G~PArvv  329 (360)
T PLN02357        316 PPRTTAVGNPARLI  329 (360)
T ss_pred             CCCcEEECCCeEEE
Confidence            4444 445554443

>TIGR03308 phn_thr-fam phosphonate metabolim protein, transferase hexapeptide repeat family

Probab=99.68  E-value=2e-16  Score=147.75  Aligned_cols=121  Identities=32%  Similarity=0.493  Sum_probs=86.3

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCC-----------cEECCCcEEcCCCEECCCCccC--------------------
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGET-----------AVIGDNVSILHNVTLGGTGKMS--------------------  302 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~-----------~~IGdnV~Ig~gvtIgg~~~i~--------------------  302 (388)
                      ++.||+++.||+++.|.+   ++||++           +.||++|.|+++++|+......                    
T Consensus        19 ~~~IG~~~~Ig~~a~I~~---s~IG~~s~I~~~~~i~~~~IG~~~~I~~~v~I~~~~h~~~~~s~~~~~~~~~~~~~~~~   95 (204)
T TIGR03308        19 ESKLGRYTEIGERTRLRE---VALGDYSYVMRDCDIIYTTIGKFCSIAAMVRINATNHPMERPTLHHFTYRAAMYFDDAS   95 (204)
T ss_pred             ccEeCCCcEECCCcEEeC---CEECCCCEECCCcEEeeeEECCCCEECCCCEECCCCCCCCccccccccccccccccccc
Confidence            456777777777776653   344433           3455666666666665321100                    


Q ss_pred             ---------CCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCCCCccccCCCCcc
Q 047635          303 ---------GDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSFT  373 (388)
Q Consensus       303 ---------g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~~~~~~~~p~~~  373 (388)
                               ...+++||++|+||.+++|..+++||++++||+|++|.+|||++++++|+||++++++.        +...
T Consensus        96 ~~~~~~~~~~~~~~~Ig~~~~Ig~~~~I~~gv~Ig~~~~I~~gs~v~~~i~~~~~~~G~Pa~~~~~~~--------~~~~  167 (204)
T TIGR03308        96 DDADFFAWRRAKRVTIGHDVWIGHGAVILPGVTIGNGAVIAAGAVVTKDVAPYTIVAGVPAKLIRRRF--------PPEI  167 (204)
T ss_pred             ccccccccccCCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCCCCcEEEecCchHhhhcC--------CHHH
Confidence                     12478999999999999999999999999999999999999999999999999987542        2222


Q ss_pred             ccccccccccCCC
Q 047635          374 MDHTSHIHEWSDY  386 (388)
Q Consensus       374 ~~~~~~~~~~~dy  386 (388)
                      ..+..- .+||||
T Consensus       168 ~~~l~~-~~ww~~  179 (204)
T TIGR03308       168 AARIEA-LAWWDW  179 (204)
T ss_pred             HHHHHh-ccccCC
Confidence            333322 369987

This family of proteins contains copies of the Bacterial transferase hexapeptide repeat family (pfam00132) and is only found in operons encoding the phosphonate C-P lyase system (GenProp0232). Many C-P lyase operons, however, lack a homolog of this protein.

>PRK11132 cysE serine acetyltransferase; Provisional

Probab=99.66  E-value=2.8e-16  Score=152.37  Aligned_cols=167  Identities=17%  Similarity=0.219  Sum_probs=120.7

Q ss_pred             ccccccccccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHh
Q 047635          105 AIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVI  184 (388)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l  184 (388)
                      ....++++.++....+.+++.+++|+.+..++||++.++++ ++|.+++|.+...||++++|+........   .+    
T Consensus        60 ~~~~r~~~~~~~~~~~~~~~~i~~Di~~~~~~dpa~~~~~~-pll~~~gf~a~~~yR~a~~l~~~~~~~la---~~----  131 (273)
T PRK11132         60 AIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYST-PLLYLKGFHALQAYRIGHWLWNQGRRALA---IY----  131 (273)
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCccccceeE-EEEECCChHHHHHHHHHHHHHHCCCchhh---hh----
Confidence            33444555666678889999999999999999999999887 89999999999999999999864321100   00    


Q ss_pred             hhcHHHHHHHHHHH--HHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcE
Q 047635          185 VEDQEIIKAVKADL--IAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAK  262 (388)
Q Consensus       185 ~~~p~i~~~i~~Dl--~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~  262 (388)
                               +....  ..-.+..|.+......                                 .+.+..++.||++++
T Consensus       132 ---------~~~~~~~~~gidI~~~a~IG~g~---------------------------------~I~h~~givIG~~a~  169 (273)
T PRK11132        132 ---------LQNQISVAFQVDIHPAAKIGRGI---------------------------------MLDHATGIVIGETAV  169 (273)
T ss_pred             ---------hhhcceeeeeeEecCcceECCCe---------------------------------EEcCCCCeEECCCCE
Confidence                     00000  0011111222111111                                 122345789999999


Q ss_pred             ECCceEEcCCCCcEECC--------CcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEE
Q 047635          263 IGRGLLFDHATGVVVGE--------TAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI  333 (388)
Q Consensus       263 IG~gv~I~~gtgVvIG~--------~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~I  333 (388)
                      ||++|.|.+  +++||.        .++||++|.||.|++|.+        +++||+||.||+|++|.++  |.+++++
T Consensus       170 IGdnv~I~~--~VtiGg~~~~~~~~~p~IGd~V~IGaga~Ilg--------gv~IG~~a~IGAgSvV~~d--Vp~~~~v  236 (273)
T PRK11132        170 IENDVSILQ--SVTLGGTGKTSGDRHPKIREGVMIGAGAKILG--------NIEVGRGAKIGAGSVVLQP--VPPHTTA  236 (273)
T ss_pred             ECCCCEEcC--CcEEecCcccCCCcCCEECCCcEEcCCCEEcC--------CCEECCCCEECCCCEECcc--cCCCcEE
Confidence            999999998  899986        369999999999999987        7999999999999999986  6666644

>KOG4750 consensus Serine O-acetyltransferase [Amino acid transport and metabolism]

Probab=99.66  E-value=1.2e-16  Score=148.54  Aligned_cols=169  Identities=22%  Similarity=0.215  Sum_probs=131.5

Q ss_pred             cccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCc--ccchHHHHHHHHHHhhhcHH
Q 047635          112 IDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSL--SLQSGTLFELFMGVIVEDQE  189 (388)
Q Consensus       112 ~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~--~~~~~~l~~~~~~~l~~~p~  189 (388)
                      +......++.+...++.|.++...+||++-+|-. .+|..++|.+..+||+||+||..  +..+-.++..+.+.+     
T Consensus        74 f~~~~~~d~~i~~s~~~dl~a~~~rdPac~dy~s-~~l~~kgF~A~Qa~RiaH~Lw~~~rk~lal~~q~ris~~~-----  147 (269)
T KOG4750|consen   74 FLSVLRADPLIRESVFDDLDAFKIRDPACIDYGS-NILHGKGFLANQAYRIAHNLWTQDRKILALGLQVRISPNF-----  147 (269)
T ss_pred             hHHHhccCHHHHHHHHHhhhhhccCCcchhhhHH-HhHhcccHhhhhHHHhhhhheecCCeeEEEeecceecccc-----
Confidence            4444556778999999999999999999999876 89999999999999999999986  333434444444333     


Q ss_pred             HHHHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEE
Q 047635          190 IIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLF  269 (388)
Q Consensus       190 i~~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I  269 (388)
                                 ..+.+|++......+                                 ..+..|++||++|.||+++.|
T Consensus       148 -----------gvdihpaa~ig~gil---------------------------------ldhatgvvigeTAvvg~~vSi  183 (269)
T KOG4750|consen  148 -----------GVDIHPAAKIGKGIL---------------------------------LDHATGVVIGETAVVGDNVSI  183 (269)
T ss_pred             -----------cccccchhhccccee---------------------------------eccccceeecceeEeccceee
Confidence                       345667764443333                                 245789999999999999999


Q ss_pred             cCCCCcEECCC--------cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECC
Q 047635          270 DHATGVVVGET--------AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK  341 (388)
Q Consensus       270 ~~gtgVvIG~~--------~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~  341 (388)
                      .|  ++++|.+        ..|||||.||.|++|.+        +++||+|++||+|++|+.+|- .+...+|.-+-+..
T Consensus       184 lH--~Vtlggtgk~~gdrhP~Igd~vliGaGvtILg--------nV~IGegavIaAGsvV~kDVP-~~~~AvGnPAklIg  252 (269)
T KOG4750|consen  184 LH--PVTLGGTGKGSGDRHPKIGDNVLIGAGVTILG--------NVTIGEGAVIAAGSVVLKDVP-PNTLAVGNPAKLIG  252 (269)
T ss_pred             ec--ceeeccccccccccCCcccCCeEEccccEEeC--------CeeECCCcEEeccceEEeccC-CCceecCCchhhcc
Confidence            99  8888875        58999999999999987        699999999999999998743 23334555554443

>PRK05289 UDP-N-acetylglucosamine acyltransferase; Provisional

Probab=99.64  E-value=5.7e-16  Score=149.65  Aligned_cols=106  Identities=27%  Similarity=0.404  Sum_probs=88.6

Q ss_pred             eeEecCCcEECCceEEcCCC-----CcEECCCcEECCCcEEcCCCEECCCCccCC----CCCCEECCCcEEccCCEECCC
Q 047635          254 SVDIHPGAKIGRGLLFDHAT-----GVVVGETAVIGDNVSILHNVTLGGTGKMSG----DRHPKIGNGVLVGAGTCILGN  324 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gt-----gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Ilg~  324 (388)
                      .+.||+++.|++++.|..++     .++||+++.|+.++.|+++|.||.+..+..    ..+++|||+|+||+++.|.++
T Consensus        80 ~v~IG~~~~I~e~~~I~~~~~~~~~~t~IG~~~~I~~~~~I~h~~~IG~~v~i~~~~~i~g~v~Igd~~~Ig~~~~i~~~  159 (262)
T PRK05289         80 RLVIGDNNTIREFVTINRGTVQGGGVTRIGDNNLLMAYVHVAHDCVVGNHVILANNATLAGHVEVGDYAIIGGLTAVHQF  159 (262)
T ss_pred             eEEECCCCEECCCeEEecccccCCCeeEECCceEECCCCEECCeEEECCCeEECCccccccccccCCcEEEeecceecCC
Confidence            57788888888888887643     467888887777777777777766554433    247899999999999999999


Q ss_pred             cEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          325 IKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       325 V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      ++||++++||++|+|.+|||+++++.|+||++.+.
T Consensus       160 v~Ig~~~~Ig~gs~V~~di~~~~~~~G~pa~~~~~  194 (262)
T PRK05289        160 VRIGAHAMVGGMSGVSQDVPPYVLAEGNPARLRGL  194 (262)
T ss_pred             CEECCCCEEeeecceeccCCCCeEEecccCeEecc
Confidence            99999999999999999999999999999999753

>cd04646 LbH_Dynactin_6 Dynactin 6 (or subunit p27): Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport

Probab=99.64  E-value=8e-16  Score=138.77  Aligned_cols=124  Identities=21%  Similarity=0.302  Sum_probs=95.4

Q ss_pred             eeeEecCCcEECCceEEcCC-CCcEECCCcEECCCcEEcCC----------CEECCCCccCCC---CCCEECCCcEEccC
Q 047635          253 FSVDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSILHN----------VTLGGTGKMSGD---RHPKIGNGVLVGAG  318 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~Ig~g----------vtIgg~~~i~g~---~~~~IGd~V~IGag  318 (388)
                      ..+.||+++.|++++.|... ..++||+++.|+++|+|.+.          +.||++..+...   .+++|||+|+||++
T Consensus        16 g~v~IG~~~~I~~~a~I~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~v~IG~~~~i~~~~~i~~~~IGd~~~Ig~~   95 (164)
T cd04646          16 GDVTIGPGTVVHPRATIIAEAGPIIIGENNIIEEQVTIVNKKPKDPAEPKPMIIGSNNVFEVGCKCEALKIGNNNVFESK   95 (164)
T ss_pred             CceEECCCCEEcCCeEEecCCCCeEECCCCEECCCcEEecCCCCCCCCCCCeEECCCCEECCCcEEEeeEECCCCEEeCC
Confidence            45778888888888877642 35788888888888888654          456665443321   24899999999999


Q ss_pred             CEECCCcEECCCCEECCCCEECCC--CCCCcEEEecCcEEeccCCCCccccCCCCcccccccccccc
Q 047635          319 TCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEW  383 (388)
Q Consensus       319 a~Ilg~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~~~~~~~~  383 (388)
                      |+|+++++||++|+||++++|.++  +|+++++.|+|+...-.       ...|+...+|-+++++|
T Consensus        96 a~I~~gv~Ig~~~~IgagsvV~~~~~i~~~~vi~g~~~~~~~~-------~~~~~~~~~~~~~~~~~  155 (164)
T cd04646          96 SFVGKNVIITDGCIIGAGCKLPSSEILPENTVIYGADCLRRTQ-------TDRPKPQTLQLDFLRKI  155 (164)
T ss_pred             CEECCCCEECCCCEEeCCeEECCCcEECCCeEEeCCceEEEec-------CCCchhHHHHHHHHHHH
Confidence            999999999999999999999999  89999999999865532       23455566676666665

Dynactin is a heterocomplex of at least eight subunits, including a 150,000-MW protein called Glued, the actin-capping protein Arp1, and dynamatin. In vitro binding experiments show that dynactin enhances dynein-dependent motility, possibly through interaction with microtubules and vesicles. Subunit p27 is part of the pointed-end subcomplex in dynactin that also includes p25, p26, and Arp11. This subcomplex interacts with membranous cargoes. p25 and p27 contain the imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), indicating a left-handed parallel beta helix (LbH) structural domain. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.

>PRK13627 carnitine operon protein CaiE; Provisional

Probab=99.64  E-value=1.4e-15  Score=141.17  Aligned_cols=110  Identities=23%  Similarity=0.294  Sum_probs=82.2

Q ss_pred             eeeeEecCCcEECCceEEcCCC-CcEECCCcEECCCcEEcCC----CEECCCCccCCC---CCCEECCCcEEccCCEECC
Q 047635          252 VFSVDIHPGAKIGRGLLFDHAT-GVVVGETAVIGDNVSILHN----VTLGGTGKMSGD---RHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gt-gVvIG~~~~IGdnV~Ig~g----vtIgg~~~i~g~---~~~~IGd~V~IGaga~Ilg  323 (388)
                      ...+.||+++.|+.++.|.... .++||+++.||++|.|...    +.|+.++.+...   .+++||++|+||.+++|+.
T Consensus        26 ~g~V~IG~~~~I~~~avIrgd~~~i~Ig~~~~Ig~~~~I~~~~~~~siIg~~~~Ig~~a~i~g~vIG~~v~IG~ga~V~~  105 (196)
T PRK13627         26 IGDVIVGAGVYIGPLASLRGDYGRLIVQAGANLQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMD  105 (196)
T ss_pred             ECceEECCCCEECCCCEEecCCccEEECCCCEECCCCEEeCCCCCCCEECCCCEECCCcEEeeEEECCCCEECcCCccCC
Confidence            3446677777777777775421 3567777777777766321    233333332221   2579999999999999999


Q ss_pred             CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCC
Q 047635          324 NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~  361 (388)
                      +++||++++|++||+|.+++  |++++++|+|||+++...
T Consensus       106 g~~IG~~s~Vgags~V~~~~~ip~~~~~~G~Pa~~~~~~~  145 (196)
T PRK13627        106 GAVIGEESIVAAMSFVKAGFQGEKRQLLMGTPARAVRSVS  145 (196)
T ss_pred             CcEECCCCEEcCCCEEeCCcCcCCCcEEEecCCEEeccCC
Confidence            99999999999999999986  999999999999998754

>PRK12461 UDP-N-acetylglucosamine acyltransferase; Provisional

Probab=99.63  E-value=5e-16  Score=149.72  Aligned_cols=107  Identities=21%  Similarity=0.366  Sum_probs=78.5

Q ss_pred             eeEecCCcEECCceEEcCCC----CcEECCCcEECCCcEEcCCCEECCCCccCC----CCCCEECCCcEEccCCEECCCc
Q 047635          254 SVDIHPGAKIGRGLLFDHAT----GVVVGETAVIGDNVSILHNVTLGGTGKMSG----DRHPKIGNGVLVGAGTCILGNI  325 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gt----gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Ilg~V  325 (388)
                      .+.||.++.|++++.|..++    .++||+++.|.+++.|+++|.||++..+..    ..+++|||+|+||+++.|.+++
T Consensus        77 ~v~IG~~~~I~e~vtI~~gt~~g~~t~IG~~~~i~~~~~I~hd~~IG~~v~i~~~~~i~g~v~Igd~a~Ig~~a~V~~~~  156 (255)
T PRK12461         77 RLEIGDRNVIREGVTIHRGTKGGGVTRIGNDNLLMAYSHVAHDCQIGNNVILVNGALLAGHVTVGDRAIISGNCLVHQFC  156 (255)
T ss_pred             eeEECCceEECCccEEecCcccCCcEEEcccceeccCcEECCCCEECCCcEECCCCccCCceEECCCeEEeCCCEECCCC
Confidence            46677777777777776532    345555544444444444444443332221    1379999999999999999999


Q ss_pred             EECCCCEECCCCEECCCCCCCcEEEecCcEEeccC
Q 047635          326 KIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGK  360 (388)
Q Consensus       326 ~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~  360 (388)
                      +||++++|+++++|.+|||+++++.|+||++.+-.
T Consensus       157 ~IG~~a~Vg~gs~V~~dVpp~~i~~G~pa~~~~~n  191 (255)
T PRK12461        157 RIGALAMMAGGSRISKDVPPYCMMAGHPTNVHGLN  191 (255)
T ss_pred             EECCCcEECCCceEeccCCCCeEEecCcceEeccc
Confidence            99999999999999999999999999999985443

>TIGR01853 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Probab=99.62  E-value=1.3e-15  Score=151.44  Aligned_cols=113  Identities=30%  Similarity=0.410  Sum_probs=92.5

Q ss_pred             eeeEecCCcEECCceEEcCCC--CcEECCCcEECCCcEEcCCCEECCCCccCC----CCCCEECCCcEEccCCEECCCcE
Q 047635          253 FSVDIHPGAKIGRGLLFDHAT--GVVVGETAVIGDNVSILHNVTLGGTGKMSG----DRHPKIGNGVLVGAGTCILGNIK  326 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gt--gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Ilg~V~  326 (388)
                      ..+.|+.++.||.|+.|+.++  +++||+++.|++.|.|+++|.||.++.+.+    ..+++||++|+||.++.|.++++
T Consensus       194 G~vvIgd~v~IGa~~~I~r~~~~~t~Ig~~~~I~n~v~I~~~v~IG~~~~I~~~~~iag~~~IG~~~~ig~~~~I~~~v~  273 (324)
T TIGR01853       194 GRVIIEDDVEIGANTTIDRGAFDDTIIGEGTKIDNLVQIAHNCRIGENCIIVAQVGIAGSTKIGRNVIIGGQVGVAGHLE  273 (324)
T ss_pred             ceEEECCCcEECCCCEEecCCcCcceecCCcEEccCcEECCCCEECCCcEECCcceEcCccEECCCeEEccccccccCCE
Confidence            357788888888888887532  467777777777777777777766655543    24689999999999999999999


Q ss_pred             ECCCCEECCCCEECCCCCCCcEEEecCcEEeccCCCCcc
Q 047635          327 IGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFM  365 (388)
Q Consensus       327 IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~~~~  365 (388)
                      ||++|+||++++|++|+|+++++.|+||+.++++.+...
T Consensus       274 Ig~~~~ig~~s~V~~~v~~~~~~~G~pa~~~~~~~~~~~  312 (324)
T TIGR01853       274 IGDNVTIGAKSGVTKSIPPPGVYGGIPARPNKEWLRIAA  312 (324)
T ss_pred             ECCCCEEccCCEeCCcCCCCcEEEccCccHHHHHHHHHH
Confidence            999999999999999999999999999999988765443

This model describes LpxD, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species. This protein represents the third step from UDP-N-acetyl-D-glucosamine. The group added at this step generally is 14:0(3-OH) (myristate) but may vary; in Aquifex it appears to be 16:0(3-OH) (palmitate).

>COG0663 PaaY Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]

Probab=99.62  E-value=9.2e-16  Score=139.05  Aligned_cols=111  Identities=30%  Similarity=0.507  Sum_probs=84.7

Q ss_pred             ccceeeeeEecCCcEECCceEEcCC-CCcEECCCcEECCCcEE----------cCCCEECCCCccCCCCCCEECCCcEEc
Q 047635          248 RVSEVFSVDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSI----------LHNVTLGGTGKMSGDRHPKIGNGVLVG  316 (388)
Q Consensus       248 ~~~~~~gV~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~I----------g~gvtIgg~~~i~g~~~~~IGd~V~IG  316 (388)
                      .......|.|+.++.|+.++.|... ..+.||+++.|.|||+|          |++|+||-...+-   .++||++|+||
T Consensus        23 ~A~viGdV~Ig~~vsIw~~aVlRgD~~~I~IG~~tNIQDg~ViH~~~~~p~~IG~~vtIGH~aivH---Gc~Ig~~~lIG   99 (176)
T COG0663          23 SATVIGDVRIGAGVSIWPGAVLRGDVEPIRIGARTNIQDGVVIHADPGYPVTIGDDVTIGHGAVVH---GCTIGDNVLIG   99 (176)
T ss_pred             CCEEEEeEEECCCCEECCceEEEccCCceEECCCceecCCeEEecCCCCCeEECCCcEEcCccEEE---EeEECCCcEEe
Confidence            3344566778888888877777553 36778877766666543          3333333322222   38999999999


Q ss_pred             cCCEECCCcEECCCCEECCCCEECC--CCCCCcEEEecCcEEeccCC
Q 047635          317 AGTCILGNIKIGDGAKIGAGSVVLK--DVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       317 aga~Ilg~V~IGd~v~IGagsVV~~--dVp~~s~VvG~PArvi~~~~  361 (388)
                      -||+|+.+++||++|+|||||+|++  .+|++++++|.|||+++...
T Consensus       100 mgA~vldga~IG~~~iVgAgalV~~~k~~p~~~L~~G~Pak~~r~l~  146 (176)
T COG0663         100 MGATVLDGAVIGDGSIVGAGALVTPGKEIPGGSLVVGSPAKVVRPLD  146 (176)
T ss_pred             cCceEeCCcEECCCcEEccCCcccCCcCCCCCeEeecCcceeeecCC
Confidence            9999999999999999999999997  58999999999999998755

>cd03360 LbH_AT_putative Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain

Probab=99.61  E-value=4.5e-15  Score=132.97  Aligned_cols=48  Identities=52%  Similarity=0.895  Sum_probs=46.8

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNP  353 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~P  353 (388)
                      +++||++|+||.+++|.++++||++++||++++|.+++|++++++|+|
T Consensus       150 ~~~ig~~~~ig~~~~v~~~~~ig~~~~v~~~~~v~~~~~~~~~~~g~p  197 (197)
T cd03360         150 GVTIGEGAFIGAGATIIQGVTIGAGAIIGAGAVVTKDVPDGSVVVGNP  197 (197)
T ss_pred             CcEECCCCEECCCCEEcCCCEECCCCEECCCCEEcCCCCCCCEEEecC
Confidence            589999999999999999999999999999999999999999999998

The alignment contains 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. A few members are identified as NeuD, a sialic acid (Sia) O-acetyltransferase that is required for Sia synthesis and surface polysaccharide sialylation.

>cd03350 LbH_THP_succinylT 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (also called THP succinyltransferase): THDP N-succinyltransferase catalyzes the conversion of tetrahydrodipicolinate and succinyl-CoA to N-succinyltetrahydrodipicolinate and CoA

Probab=99.61  E-value=6.6e-15  Score=128.82  Aligned_cols=99  Identities=27%  Similarity=0.434  Sum_probs=73.7

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEE
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI  333 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~I  333 (388)
                      ++.+..++.||+++.|.+  +++|+.+++||++|.|+.+++|++........+++||++|+||++++|.++++||+++.|
T Consensus        25 ~~~i~~~~~IG~~~~I~~--~~~I~~~~~IG~~~~I~~~~~igg~~~~~~~~~v~Ig~~~~Ig~~a~I~~gv~Ig~~~~I  102 (139)
T cd03350          25 PSYVNIGAYVDEGTMVDS--WATVGSCAQIGKNVHLSAGAVIGGVLEPLQATPVIIEDDVFIGANCEVVEGVIVGKGAVL  102 (139)
T ss_pred             CCEEccCCEECCCeEEcC--CCEECCCCEECCCCEECCCCEECCcccccccCCeEECCCCEECCCCEECCCCEECCCCEE
Confidence            344555555666666655  566666777777777777777765322222246899999999999999999999999999


Q ss_pred             CCCCEEC---------------CCCCCC-cEEEecCc
Q 047635          334 GAGSVVL---------------KDVPPR-TTAVGNPA  354 (388)
Q Consensus       334 GagsVV~---------------~dVp~~-s~VvG~PA  354 (388)
                      |++++|.               +|+|++ ++++|+|.
T Consensus       103 g~g~~V~~~~~I~~~~~~~~v~~~~~~~~~~~~g~~~  139 (139)
T cd03350         103 AAGVVLTQSTPIYDRETGEIYYGRVPPGSVVVAGSLP  139 (139)
T ss_pred             cCCCEEcCCeEecccCcccEEecccCCCCEEecccCC
Confidence            9999999               888888 78888873

It is the committed step in the succinylase pathway by which bacteria synthesize L-lysine and meso-diaminopimelate, a component of peptidoglycan. The enzyme is homotrimeric and each subunit contains an N-terminal region with alpha helices and hairpin loops, as well as a C-terminal region with a left-handed parallel alpha-helix (LbH) structural motif encoded by hexapeptide repeat motifs.

>PLN02296 carbonate dehydratase

Probab=99.60  E-value=6.7e-15  Score=142.87  Aligned_cols=110  Identities=21%  Similarity=0.369  Sum_probs=85.6

Q ss_pred             eeeeEecCCcEECCceEEcCC-CCcEECCCcEECCCcEEc----------CCCEECCCCccCCC---CCCEECCCcEEcc
Q 047635          252 VFSVDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSIL----------HNVTLGGTGKMSGD---RHPKIGNGVLVGA  317 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~Ig----------~gvtIgg~~~i~g~---~~~~IGd~V~IGa  317 (388)
                      ...+.||+++.|+.++.|... .+++||+++.|+++|+|.          ++++||.+..+...   +.++||++|+||.
T Consensus        68 ~G~V~IG~~~~I~~gavI~g~~~~I~IG~~~~I~d~~vI~~~~~~~~g~~~~siIG~~v~IG~~avI~g~~Igd~v~IG~  147 (269)
T PLN02296         68 IGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKTNLSGKVLPTIIGDNVTIGHSAVLHGCTVEDEAFVGM  147 (269)
T ss_pred             EcceEECCCCEECCCCEEEcCCCceEECCCCEECCCCEEEeCCCcccCCCCCcEeCCCCEECCCceecCCEECCCcEECC
Confidence            345677888888777777642 246788888888777653          23444444333321   3579999999999


Q ss_pred             CCEECCCcEECCCCEECCCCEECCC--CCCCcEEEecCcEEeccCC
Q 047635          318 GTCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       318 ga~Ilg~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~~~  361 (388)
                      |++|+++++||++|+||+|++|.++  ||++++++|+||++++...
T Consensus       148 ga~I~~gv~Ig~~a~IgagSvV~~~~~I~~~~~~~G~PA~~ir~~~  193 (269)
T PLN02296        148 GATLLDGVVVEKHAMVAAGALVRQNTRIPSGEVWAGNPAKFLRKLT  193 (269)
T ss_pred             CcEECCCeEECCCCEECCCCEEecCCEeCCCeEEeccCcEEeCCCC
Confidence            9999999999999999999999999  8999999999999998654

>cd04745 LbH_paaY_like paaY-like: This group is composed by uncharacterized proteins with similarity to the protein product of the E

Probab=99.59  E-value=1.5e-14  Score=128.89  Aligned_cols=109  Identities=26%  Similarity=0.378  Sum_probs=85.4

Q ss_pred             eeeEecCCcEECCceEEcCC-CCcEECCCcEECCCcEE----cCCCEECCCCccCCC---CCCEECCCcEEccCCEECCC
Q 047635          253 FSVDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSI----LHNVTLGGTGKMSGD---RHPKIGNGVLVGAGTCILGN  324 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~I----g~gvtIgg~~~i~g~---~~~~IGd~V~IGaga~Ilg~  324 (388)
                      ..+.||+++.|++++.|... ..++||+++.||++|+|    +++++|+.+..+...   .+++||++|+||++++|.++
T Consensus        17 g~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~g   96 (155)
T cd04745          17 GDVIIGKNCYIGPHASLRGDFGRIVIRDGANVQDNCVIHGFPGQDTVLEENGHIGHGAILHGCTIGRNALVGMNAVVMDG   96 (155)
T ss_pred             ccEEECCCCEECCCcEEeCCCCcEEECCCCEECCCCEEeecCCCCeEEcCCCEECCCcEEECCEECCCCEECCCCEEeCC
Confidence            35678888888888777541 24778888888877766    233455544443322   25799999999999999999


Q ss_pred             cEECCCCEECCCCEECC--CCCCCcEEEecCcEEeccCC
Q 047635          325 IKIGDGAKIGAGSVVLK--DVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       325 V~IGd~v~IGagsVV~~--dVp~~s~VvG~PArvi~~~~  361 (388)
                      ++||++++||++++|.+  ++|++++++|+|||+++...
T Consensus        97 ~~Ig~~~~Ig~~s~v~~~~~i~~~~~v~G~Pa~~~~~~~  135 (155)
T cd04745          97 AVIGEESIVGAMAFVKAGTVIPPRSLIAGSPAKVIRELS  135 (155)
T ss_pred             CEECCCCEECCCCEeCCCCEeCCCCEEecCCceEeccCC
Confidence            99999999999999998  68999999999999998754

coli paaY gene, which is part of the paa gene cluster responsible for phenylacetic acid degradation. Proteins in this group are expected to adopt the left-handed parallel beta-helix (LbH) structure. They contain imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Similarity to gamma carbonic anhydrase and Ferripyochelin Binding Protein (FBP) may suggest metal binding capacity.

>TIGR01852 lipid_A_lpxA acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase

Probab=99.59  E-value=1e-14  Score=140.06  Aligned_cols=106  Identities=25%  Similarity=0.345  Sum_probs=87.1

Q ss_pred             eeEecCCcEECCceEEcCC-----CCcEECCCcEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEECCC
Q 047635          254 SVDIHPGAKIGRGLLFDHA-----TGVVVGETAVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCILGN  324 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~g-----tgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Ilg~  324 (388)
                      .+.||+++.|++++.|..+     ..++||+++.|+.++.|+++|+||++..+...    .+++|||+|+||+++.|.++
T Consensus        76 ~v~IG~~~~I~~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~~~Igd~~~Ig~~~~i~~~  155 (254)
T TIGR01852        76 ELIIGDNNTIREFVTINRGTASGGGVTRIGNNNLLMAYSHIAHDCVVGNHVILANNATLAGHVEVGDYAIIGGLVAVHQF  155 (254)
T ss_pred             eEEECCCCEECCCCEECCcccCCCCcEEECCCCEECCCCEEccCCEECCCCEECCCCEECCCcEECCCcEEeccCEECCC
Confidence            5778888888888888753     25677777777777777666666665554432    46899999999999999999


Q ss_pred             cEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          325 IKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       325 V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      ++||++++||++++|.++||+++++.|+|+++.+.
T Consensus       156 v~Ig~~~~Ig~~s~V~~~i~~~~~~~G~pa~~~~~  190 (254)
T TIGR01852       156 VRIGRYAMIGGLSAVSKDVPPYGLVEGNRARLRGL  190 (254)
T ss_pred             cEECCCCEEeeeeeEeeecCCCcEEecCcCeeccc
Confidence            99999999999999999999999999999998653

This model describes LpxA, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species, but this protein represents the first step (from UDP-N-acetyl-D-glucosamine) and appears to be conserved in function. Proteins from this family contain many copies of the bacterial transferase hexapeptide repeat (pfam00132).

>TIGR03570 NeuD_NnaD sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family

Probab=99.59  E-value=9.8e-15  Score=132.56  Aligned_cols=98  Identities=34%  Similarity=0.599  Sum_probs=68.2

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCC----CCCCEECCCcEEccCCEECCCcEECCC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSG----DRHPKIGNGVLVGAGTCILGNIKIGDG  330 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Ilg~V~IGd~  330 (388)
                      +.||+++.|++++.|++  +++||+++.|+.++.|++++.|+++..+..    ...++||++|+||++++|.++++||++
T Consensus       100 ~~ig~~~~i~~~~~i~~--~~~ig~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~~~~ig~~~~ig~~~~v~~~~~i~~~  177 (201)
T TIGR03570       100 ASIGEGTVIMAGAVINP--DVRIGDNVIINTGAIVEHDCVIGDYVHIAPGVTLSGGVVIGEGVFIGAGATIIQGVTIGAG  177 (201)
T ss_pred             CEECCCCEECCCCEECC--CCEECCCcEECCCCEEcCCCEECCCCEECCCCEEeCCcEECCCCEECCCCEEeCCCEECCC
Confidence            33444444444444433  444444444444444444444444333321    126799999999999999999999999


Q ss_pred             CEECCCCEECCCCCCCcEEEecCc
Q 047635          331 AKIGAGSVVLKDVPPRTTAVGNPA  354 (388)
Q Consensus       331 v~IGagsVV~~dVp~~s~VvG~PA  354 (388)
                      |+||++++|.+++|+++++.|+||
T Consensus       178 ~~i~~~~~v~~~~~~~~~~~g~pa  201 (201)
T TIGR03570       178 AIVGAGAVVTKDIPDGGVVVGVPA  201 (201)
T ss_pred             CEECCCCEECCcCCCCCEEEeccC
Confidence            999999999999999999999997

These proteins contain repeats of the bacterial transferase hexapeptide (pfam00132), although often these do not register above the trusted cutoff.

>cd03352 LbH_LpxD UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD): The enzyme catalyzes the transfer of 3-hydroxymyristic acid or 3-hydroxy-arachidic acid, depending on the organism, from the acyl carrier protein (ACP) to UDP-3-O-acyl-glucosamine to produce UDP-2,3-diacyl-GlcNAc

Probab=99.59  E-value=1e-14  Score=134.73  Aligned_cols=108  Identities=33%  Similarity=0.488  Sum_probs=88.9

Q ss_pred             eeeEecCCcEECCceEEcCC--CCcEECCCcEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEECCCcE
Q 047635          253 FSVDIHPGAKIGRGLLFDHA--TGVVVGETAVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCILGNIK  326 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~g--tgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Ilg~V~  326 (388)
                      ..+.|++++.||.++.+..+  .+++||+++.|++++.|++++.|++...+...    .+++||++|+||++++|.++++
T Consensus        91 ~~v~Ig~~~~Ig~~~~i~~~~~~~~~Ig~~~~i~~~v~I~~~~~ig~~~~i~~~~~i~~~~~Ig~~~~ig~~~~v~~~~~  170 (205)
T cd03352          91 GGVIIGDDVEIGANTTIDRGALGDTVIGDGTKIDNLVQIAHNVRIGENCLIAAQVGIAGSTTIGDNVIIGGQVGIAGHLT  170 (205)
T ss_pred             ceEEECCCEEECCCCEEeccccCCeEECCCCEECCceEEeCCCEECCCCEECCCCEEccccEECCCeEEcCCCEEeCCcE
Confidence            35677888888888877652  25677777777777777777777766555432    3689999999999999999999


Q ss_pred             ECCCCEECCCCEECCCCCCCcEEEecCcEEeccC
Q 047635          327 IGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGK  360 (388)
Q Consensus       327 IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~  360 (388)
                      ||++++|+++++|.+|+|++.++.|+||++++++
T Consensus       171 ig~~~~i~~~s~v~~~~~~~~~~~G~pa~~~~~~  204 (205)
T cd03352         171 IGDGVVIGAGSGVTSIVPPGEYVSGTPAQPHREW  204 (205)
T ss_pred             ECCCCEEcCCCEEeeECCCCCEEEeecCchhhhc
Confidence            9999999999999999999999999999998754

This constitutes the third step in the lipid A biosynthetic pathway in Gram-negative bacteria. LpxD is a homotrimer, with each subunit consisting of a novel combination of an N-terminal uridine-binding domain, a core lipid-binding left-handed parallel beta helix (LbH) domain, and a C-terminal alpha-helical extension. The LbH domain contains 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).

>cd03351 LbH_UDP-GlcNAc_AT UDP-N-acetylglucosamine O-acyltransferase (UDP-GlcNAc acyltransferase): Proteins in this family catalyze the transfer of (R)-3-hydroxymyristic acid from its acyl carrier protein thioester to UDP-GlcNAc

Probab=99.58  E-value=2.1e-14  Score=137.82  Aligned_cols=106  Identities=26%  Similarity=0.425  Sum_probs=85.9

Q ss_pred             eeEecCCcEECCceEEcCC-----CCcEECCCcEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEECCC
Q 047635          254 SVDIHPGAKIGRGLLFDHA-----TGVVVGETAVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCILGN  324 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~g-----tgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Ilg~  324 (388)
                      .+.||+++.|++++.|..+     ..++||+++.|+.+++|++++.||++..+...    .+++|||+|+||+++.|.++
T Consensus        77 ~v~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~~~i~~~  156 (254)
T cd03351          77 RLEIGDNNTIREFVTIHRGTAQGGGVTRIGNNNLLMAYVHVAHDCVIGNNVILANNATLAGHVEIGDYAIIGGLSAVHQF  156 (254)
T ss_pred             eEEECCCCEECCccEEeccccCCCCceEECCCCEECCCCEECCCCEECCCcEECCCccccCCcEeCCCcEECCcceECCC
Confidence            5677888888888877653     24777777777777777666666665554332    46899999999999999999


Q ss_pred             cEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          325 IKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       325 V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      ++||++++||++++|.++||+++++.|+|+++.+.
T Consensus       157 v~Ig~~~~Ig~~s~V~~~i~~~~~~~G~~~~~~~~  191 (254)
T cd03351         157 CRIGRHAMVGGGSGVVQDVPPYVIAAGNRARLRGL  191 (254)
T ss_pred             cEECCCCEECcCCEEeeecCCCeEEEccCCeEecc
Confidence            99999999999999999999999999999987653

It is the first enzyme in the lipid A biosynthetic pathway and is also referred to as LpxA. Lipid A is essential for the growth of Escherichia coli and related bacteria. It is also essential for maintaining the integrity of the outer membrane. UDP-GlcNAc acyltransferase is a homotrimer of left-handed parallel beta helix (LbH) subunits. Each subunit contains an N-terminal LbH region with 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), and a C-terminal alpha-helical region.

>PRK00892 lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional

Probab=99.57  E-value=9.3e-15  Score=146.20  Aligned_cols=113  Identities=30%  Similarity=0.380  Sum_probs=94.7

Q ss_pred             eeeEecCCcEECCceEEcCC--CCcEECCCcEECCCcEEcCCCEECCCCccCC----CCCCEECCCcEEccCCEECCCcE
Q 047635          253 FSVDIHPGAKIGRGLLFDHA--TGVVVGETAVIGDNVSILHNVTLGGTGKMSG----DRHPKIGNGVLVGAGTCILGNIK  326 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~g--tgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Ilg~V~  326 (388)
                      .++.||+++.||.++.|+.+  .+++||+++.|+++|+|+++|+||.+..+..    ..+++||++|+||.++.|.++++
T Consensus       202 g~v~Ig~~v~IGa~~~I~~~~~~~t~Ig~~~~i~~~v~I~~~~~IG~~~~i~~~~~i~~~~~iG~~~~ig~~~~i~~~~~  281 (343)
T PRK00892        202 GRVIIGDDVEIGANTTIDRGALDDTVIGEGVKIDNLVQIAHNVVIGRHTAIAAQVGIAGSTKIGRYCMIGGQVGIAGHLE  281 (343)
T ss_pred             ccEEECCCcEECCCcEEecCccccceeCCCCEEeCCeEEccCCEECCCcEEeeeeeecCCCEECCceEECCCCEEcCCCE
Confidence            35778888888888888764  2578888888888888888888887665543    24689999999999999999999


Q ss_pred             ECCCCEECCCCEECCCCCC-CcEEEecCcEEeccCCCCcc
Q 047635          327 IGDGAKIGAGSVVLKDVPP-RTTAVGNPARLIGGKENPFM  365 (388)
Q Consensus       327 IGd~v~IGagsVV~~dVp~-~s~VvG~PArvi~~~~~~~~  365 (388)
                      ||++++||++++|.+|+|+ +.++.|+||+.++++.+...
T Consensus       282 ig~~~~i~~~s~v~~~i~~~~~~~~G~pa~~~~~~~~~~~  321 (343)
T PRK00892        282 IGDGVTITAMSGVTKSIPEPGEYSSGIPAQPNKEWLRTAA  321 (343)
T ss_pred             ECCCCEEecCCeeCCccCCCCeEEEeecCchHHHHHHHHH
Confidence            9999999999999999999 89999999999987765443

>cd04647 LbH_MAT_like Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins

Probab=99.57  E-value=2.6e-14  Score=118.32  Aligned_cols=103  Identities=38%  Similarity=0.622  Sum_probs=82.6

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCC--EECCCCc---cCCCCCCEECCCcEEccCCEECCCcEECC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNV--TLGGTGK---MSGDRHPKIGNGVLVGAGTCILGNIKIGD  329 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gv--tIgg~~~---i~g~~~~~IGd~V~IGaga~Ilg~V~IGd  329 (388)
                      +.||+++.|++++.|....+++||+++.||++|.|..+.  .+.....   .....+++||++|+||.++.|..++.||+
T Consensus         2 v~Ig~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~ig~~~~i~~~~~ig~   81 (109)
T cd04647           2 ISIGDNVYIGPGCVISAGGGITIGDNVLIGPNVTIYDHNHDIDDPERPIEQGVTSAPIVIGDDVWIGANVVILPGVTIGD   81 (109)
T ss_pred             eEECCCcEECCCCEEecCCceEECCCCEECCCCEEECCCCCCCccccccccccccCCeEECCCCEECCCCEEcCCCEECC
Confidence            578899999999988765577888888888888776541  1111110   01124689999999999999999999999


Q ss_pred             CCEECCCCEECCCCCCCcEEEecCcEEe
Q 047635          330 GAKIGAGSVVLKDVPPRTTAVGNPARLI  357 (388)
Q Consensus       330 ~v~IGagsVV~~dVp~~s~VvG~PArvi  357 (388)
                      +|+|++++.|.+++|+++++.|.|||++
T Consensus        82 ~~~i~~~~~v~~~i~~~~i~~g~pa~~~  109 (109)
T cd04647          82 GAVVGAGSVVTKDVPPNSIVAGNPAKVI  109 (109)
T ss_pred             CCEECCCCEEeeECCCCCEEEccccEeC
Confidence            9999999999999999999999999975

MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.

>TIGR00965 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase

Probab=99.56  E-value=2.7e-14  Score=137.89  Aligned_cols=103  Identities=24%  Similarity=0.399  Sum_probs=67.0

Q ss_pred             eeeeEecCCcEECCceEEcCC---CCcEECCCcEECCC------cEEcCCCEECCCCccCC------CCCCEECCCcEEc
Q 047635          252 VFSVDIHPGAKIGRGLLFDHA---TGVVVGETAVIGDN------VSILHNVTLGGTGKMSG------DRHPKIGNGVLVG  316 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~g---tgVvIG~~~~IGdn------V~Ig~gvtIgg~~~i~g------~~~~~IGd~V~IG  316 (388)
                      ..+..|.+++.||+|+.|.++   .++.||++++|+.+      |.||++|+|+.+..+.+      ..+++|||+|+||
T Consensus       104 ~p~a~i~~ga~Ig~~vvI~p~~Vniga~IGeGt~I~~~a~IG~~v~IG~nv~I~~g~~IgG~~ep~~~~~ViIgDnv~IG  183 (269)
T TIGR00965       104 VPGAAVRQGAFIAKNVVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFIG  183 (269)
T ss_pred             CCCcEECCCcEECCCCEEeeeEEcCCcEECCCCEECCCcEECCCCEECCCCEEcCCcccCCCcccCCCCCeEECCCCEEC
Confidence            344455555555555555432   13344444433333      33333333333332222      2458999999999


Q ss_pred             cCCEECCCcEECCCCEECCCCEECC---------------CCCCCcEEE-e-cCc
Q 047635          317 AGTCILGNIKIGDGAKIGAGSVVLK---------------DVPPRTTAV-G-NPA  354 (388)
Q Consensus       317 aga~Ilg~V~IGd~v~IGagsVV~~---------------dVp~~s~Vv-G-~PA  354 (388)
                      ++|+|.++++||++|+||+|++|.+               +||++++|+ | .|.
T Consensus       184 a~a~I~~GV~IG~gavIGaGavI~~~~~I~~~~~g~v~~~~vp~~svv~~g~~p~  238 (269)
T TIGR00965       184 ARSEIVEGVIVEEGSVISMGVFIGQSTKIYDRETGEIHYGRVPAGSVVVSGNLPS  238 (269)
T ss_pred             CCCEEcCCCEECCCCEEeCCCEECCCCEEecccCCceeeeecCCCcEEecCCeec
Confidence            9999999999999999999999954               789999998 4 663

The closely related TabB protein of Pseudomonas syringae (pv. tabaci) appears to act in the biosynthesis of tabtoxin rather than lysine. The trusted cutoff is set high enough to exclude this gene. Sequences below trusted also include a version of this enzyme which apparently utilize acetate rather than succinate (EC: 2.3.1.89).

>TIGR02287 PaaY phenylacetic acid degradation protein PaaY

Probab=99.54  E-value=5.2e-14  Score=130.40  Aligned_cols=110  Identities=21%  Similarity=0.330  Sum_probs=84.7

Q ss_pred             eeeeEecCCcEECCceEEcCC-CCcEECCCcEECCCcEEc----CCCEECCCCccCCC---CCCEECCCcEEccCCEECC
Q 047635          252 VFSVDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSIL----HNVTLGGTGKMSGD---RHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~Ig----~gvtIgg~~~i~g~---~~~~IGd~V~IGaga~Ilg  323 (388)
                      ...+.||+++.|+.++.|... ..++||+++.||++|+|.    .++.|+.++.+...   .+++||++|+||.+++|..
T Consensus        24 ~G~V~IG~~~~I~~~a~I~gd~g~i~Ig~~t~Ig~~~~I~~~~~~~siIg~~~~Ig~~a~I~~siIg~~~~IG~ga~I~~  103 (192)
T TIGR02287        24 IGDVILGKRCYVGPLASLRGDFGRIVLKEGANIQDNCVMHGFPGQDTVVEENGHVGHGAILHGCIVGRNALVGMNAVVMD  103 (192)
T ss_pred             EeeEEECCCCEECCCcEEEccCCceEECCCCEECCCeEEeccCCCCCeECCCCEECCCCEEcCCEECCCCEECCCcccCC
Confidence            445778888888888877532 246777777777777662    34455544443321   2579999999999999999


Q ss_pred             CcEECCCCEECCCCEECC--CCCCCcEEEecCcEEeccCC
Q 047635          324 NIKIGDGAKIGAGSVVLK--DVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~--dVp~~s~VvG~PArvi~~~~  361 (388)
                      +++||++++||+|++|.+  ++|++++++|+|||+++...
T Consensus       104 g~~IG~~s~Vgags~V~~~~~ip~~~l~~G~Pak~i~~~~  143 (192)
T TIGR02287       104 GAVIGENSIVAASAFVKAGAEMPAQYLVVGSPAKVIRELS  143 (192)
T ss_pred             CeEECCCCEEcCCCEECCCCEECCCeEEEccCCEEeccCC
Confidence            999999999999999998  47999999999999997643

Members of this family are located next to other genes organized into apparent operons for phenylacetic acid degradation. PaaY is located near the end of these gene clusters and often next to PaaX, a transcriptional regulator.

>PLN02472 uncharacterized protein

Probab=99.54  E-value=6e-14  Score=134.62  Aligned_cols=111  Identities=18%  Similarity=0.277  Sum_probs=83.2

Q ss_pred             eeeeEecCCcEECCceEEcC-CCCcEECCCcEECCCcEEc----------CCCEECCCCccCCC---CCCEECCCcEEcc
Q 047635          252 VFSVDIHPGAKIGRGLLFDH-ATGVVVGETAVIGDNVSIL----------HNVTLGGTGKMSGD---RHPKIGNGVLVGA  317 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~-gtgVvIG~~~~IGdnV~Ig----------~gvtIgg~~~i~g~---~~~~IGd~V~IGa  317 (388)
                      ...+.||+++.|+.++.|.. ...++||+++.||++|+|.          ++++||.+..+...   ..++||++|+||.
T Consensus        75 ~G~V~Ig~~a~I~~gavirgd~~~I~IG~~t~Ig~~~vI~~~~~~~~~i~~~tvIG~~v~IG~~s~L~~~~Igd~v~IG~  154 (246)
T PLN02472         75 AGQVTVWDGASVWNGAVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETLIDRYVTIGAYSLLRSCTIEPECIIGQ  154 (246)
T ss_pred             ecCEEECCCCEEcCCCEEecCCcceEECCCCEECCCCEEeecCccccCCCCCcEECCCCEECCCcEECCeEEcCCCEECC
Confidence            34566777777777766643 2357777777777766663          23444443333221   2579999999999


Q ss_pred             CCEECCCcEECCCCEECCCCEEC--CCCCCCcEEEecCcEEeccCCC
Q 047635          318 GTCILGNIKIGDGAKIGAGSVVL--KDVPPRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       318 ga~Ilg~V~IGd~v~IGagsVV~--~dVp~~s~VvG~PArvi~~~~~  362 (388)
                      +++|+.+++||++|+||+|++|.  .++|+++++.|+||++++.+.+
T Consensus       155 ~svI~~gavIg~~~~Ig~gsvV~~g~~Ip~g~~~~G~PA~~~~~~~~  201 (246)
T PLN02472        155 HSILMEGSLVETHSILEAGSVLPPGRRIPTGELWAGNPARFVRTLTN  201 (246)
T ss_pred             CCEECCCCEECCCCEECCCCEECCCCEeCCCCEEEecCCEEeccCCH
Confidence            99999999999999999999999  5689999999999999987654

>PRK11830 dapD 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional

Probab=99.51  E-value=1.4e-13  Score=133.67  Aligned_cols=110  Identities=23%  Similarity=0.362  Sum_probs=71.0

Q ss_pred             eeeeEecCCcEECCceEEcC---CCCcEECCCc------EECCCcEEcCCCEECCCCccCC------CCCCEECCCcEEc
Q 047635          252 VFSVDIHPGAKIGRGLLFDH---ATGVVVGETA------VIGDNVSILHNVTLGGTGKMSG------DRHPKIGNGVLVG  316 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~---gtgVvIG~~~------~IGdnV~Ig~gvtIgg~~~i~g------~~~~~IGd~V~IG  316 (388)
                      ..++.|++++.||+|+.|.+   +.|..||+++      .||++|.||.+|+|+.+..+.+      ..+++|||+|+||
T Consensus       107 ~p~a~V~~ga~Ig~gavI~p~~V~iGa~Ig~gt~I~~~a~IG~~a~IG~nv~I~~gv~I~g~~~~~~~~~viIgDnv~IG  186 (272)
T PRK11830        107 VPGAVVRRGAYIAPNVVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIG  186 (272)
T ss_pred             cCCeEECCCCEECCCcEEEEEEECCCCEECCCcEEccccEECCCCEECCCcEECCCccCCCCccccCcCCeEEcCCCEEC
Confidence            34455555555555555442   1123333333      3333333444444444333322      2358999999999


Q ss_pred             cCCEECCCcEECCCCEECCCCEECC---------------CCCCCcEEE-e-----------cCcEEeccCC
Q 047635          317 AGTCILGNIKIGDGAKIGAGSVVLK---------------DVPPRTTAV-G-----------NPARLIGGKE  361 (388)
Q Consensus       317 aga~Ilg~V~IGd~v~IGagsVV~~---------------dVp~~s~Vv-G-----------~PArvi~~~~  361 (388)
                      ++++|..+++||++|+||+|++|.+               +||++++|+ |           .||+++++..
T Consensus       187 a~s~I~~Gv~IGdgavIgag~vV~~gt~I~~~~~g~v~~g~vp~~svvv~g~~~~~~~~~~~~~~~i~~~~~  258 (272)
T PRK11830        187 ARSEVVEGVIVEEGSVLGMGVFLGQSTKIYDRETGEVHYGRVPAGSVVVPGSLPSKDGGYSLYCAVIVKKVD  258 (272)
T ss_pred             CCCEEcCCCEECCCCEEcCCCEEcCCeEECcCCCCcEEeeecCCCcEEecCcccccCCCcCCcCcEEEEEcc
Confidence            9999999999999999999988875               589999987 7           3777777654

>cd04650 LbH_FBP Ferripyochelin Binding Protein (FBP): FBP is an outer membrane protein which plays a role in iron acquisition

Probab=99.48  E-value=3.2e-13  Score=120.54  Aligned_cols=110  Identities=27%  Similarity=0.429  Sum_probs=86.4

Q ss_pred             eeeeEecCCcEECCceEEcCC-CCcEECCCcEECCCcEEcCC----CEECCCCccCCC---CCCEECCCcEEccCCEECC
Q 047635          252 VFSVDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSILHN----VTLGGTGKMSGD---RHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~Ig~g----vtIgg~~~i~g~---~~~~IGd~V~IGaga~Ilg  323 (388)
                      ...+.||+++.|++++.|... .+++||+++.||++|.|...    +.|++...+...   .+++||++|+||.++.|.+
T Consensus        16 ~~~v~iG~~~~I~~~a~I~~~~~~i~Ig~~~~Ig~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~   95 (154)
T cd04650          16 IGDVVIGELTSVWHYAVIRGDNDSIYIGKYSNVQENVSIHTDHGYPTEIGDYVTIGHNAVVHGAKVGNYVIVGMGAILLN   95 (154)
T ss_pred             EeeEEECCCCEEcCCeEEEcCCCcEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCcEEECcEECCCCEEcCCCEEeC
Confidence            355778888888888887753 24788888888888876432    444443333221   2469999999999999999


Q ss_pred             CcEECCCCEECCCCEECC--CCCCCcEEEecCcEEeccCC
Q 047635          324 NIKIGDGAKIGAGSVVLK--DVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~--dVp~~s~VvG~PArvi~~~~  361 (388)
                      +++||++++|++++.|.+  ++|++++++|+||++++...
T Consensus        96 ~~~Ig~~~~vg~~~~v~~g~~i~~~~v~~G~pa~~~~~~~  135 (154)
T cd04650          96 GAKIGDHVIIGAGAVVTPGKEIPDYSLVLGVPAKVVRKLT  135 (154)
T ss_pred             CCEECCCCEECCCCEECCCcEeCCCCEEeccCceEeccCC
Confidence            999999999999999996  68999999999999997543

It binds iron when it is complexed with pyochelin. It adopts the left-handed parallel beta-helix (LbH) structure, and contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Acyltransferase activity has not been observed in this group.

>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=99.46  E-value=3.2e-13  Score=139.32  Aligned_cols=60  Identities=35%  Similarity=0.624  Sum_probs=55.1

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEE-ecCcEEeccCCCCcc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAV-GNPARLIGGKENPFM  365 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~Vv-G~PArvi~~~~~~~~  365 (388)
                      .++|||+|+||.+++|.++++||++++||+|++|.+|||++++++ |.|++.+.++.+|.+
T Consensus       394 ~~~Igd~~~ig~~~~i~~~~~ig~~~~i~~gs~v~~~v~~~~~~~~~~~~~~~~~~~~~~~  454 (456)
T PRK09451        394 KTIIGDDVFVGSDTQLVAPVTVGKGATIGAGTTVTRDVAENELVISRVPQRHIQGWQRPVK  454 (456)
T ss_pred             CCEECCCcEECCCCEEeCCcEECCCCEECCCCEEccccCCCCEEEeccCceeccccccccc
Confidence            478999999999999999999999999999999999999999996 589999998887653

>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase

Probab=99.46  E-value=3.9e-13  Score=137.62  Aligned_cols=54  Identities=39%  Similarity=0.620  Sum_probs=50.2

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      .++|||+|+||.+++|.++++||++|+||+|++|.+|||++++++|.|++...+
T Consensus       390 ~~~Igd~~~ig~~~~i~~~~~ig~~~~i~~g~~v~~~v~~~~~~~~~~~~~~~~  443 (451)
T TIGR01173       390 KTIIGDGVFIGSNTQLVAPVKVGDGATIAAGSTVTKDVPEGALAISRARQRNIE  443 (451)
T ss_pred             CCEECCCcEECCCCEEECCcEECCCCEEccCCEECccCCCCcEEEccCceeecc
Confidence            479999999999999999999999999999999999999999999988877643

This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.

>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=99.46  E-value=3.8e-13  Score=138.07  Aligned_cols=54  Identities=28%  Similarity=0.532  Sum_probs=50.9

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      .++||++|+||++++|.++++||++++||+|++|.+|||++++++|+|++.+.+
T Consensus       390 ~~~Ig~~~~iG~~~~i~~~~~ig~~~~v~~~~~v~~~~~~~~~~~g~~~~~~~~  443 (450)
T PRK14360        390 RTVIGDRSKTGANSVLVAPITLGEDVTVAAGSTITKDVPDNSLAIARSRQVIKE  443 (450)
T ss_pred             CcEeCCCeEeCCCCEEeCCcEECCCCEECCCCEECccCCCCCEEEeccceeecc
Confidence            479999999999999999999999999999999999999999999999988753

>cd03359 LbH_Dynactin_5 Dynactin 5 (or subunit p25); Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport

Probab=99.45  E-value=8.3e-13  Score=118.49  Aligned_cols=108  Identities=24%  Similarity=0.375  Sum_probs=83.3

Q ss_pred             eeEecCCcEECCceEEcCC-CCcEECCCcEECCCcEEcCC------------CEECCCCccCCC---CCCEECCCcEEcc
Q 047635          254 SVDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSILHN------------VTLGGTGKMSGD---RHPKIGNGVLVGA  317 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~Ig~g------------vtIgg~~~i~g~---~~~~IGd~V~IGa  317 (388)
                      ++.||+++.|++++.|... .+++||++|.||++|.|...            ++|+++..+...   .+.+||+++.||.
T Consensus        21 ~I~ig~~~~I~~~~~I~g~~~~v~IG~~~~I~~~~~I~~~~~~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~~Ig~~v~Ig~  100 (161)
T cd03359          21 NIVLNGKTIIQSDVIIRGDLATVSIGRYCILSEGCVIRPPFKKFSKGVAFFPLHIGDYVFIGENCVVNAAQIGSYVHIGK  100 (161)
T ss_pred             CEEECCceEEcCCCEEeCCCcceEECCCcEECCCCEEeCCccccCCCccccCeEECCccEECCCCEEEeeEEcCCcEECC
Confidence            5778888888888887742 24678888888877777542            344444333322   1357888889999


Q ss_pred             CCEECCCcEECCCCEECCCCEECCC--CCCCcEEEecCcEEeccCC
Q 047635          318 GTCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       318 ga~Ilg~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~~~  361 (388)
                      +++|..++.||++++|++|++|.++  +|+++++.|+||+++++..
T Consensus       101 ~~~Ig~~~~I~~~~~i~~g~~V~~~~~i~~~~vv~g~pa~~i~~~~  146 (161)
T cd03359         101 NCVIGRRCIIKDCVKILDGTVVPPDTVIPPYSVVSGRPARFIGELP  146 (161)
T ss_pred             CCEEcCCCEECCCcEECCCCEECCCCEeCCCCEEeccccEEEEecc
Confidence            9999999999999999999999988  7999999999999998754

Dynactin is a heterocomplex of at least eight subunits, including a 150,000-MW protein called Glued, the actin-capping protein Arp1, and dynamatin. In vitro binding experiments show that dynactin enhances dynein-dependent motility, possibly through interaction with microtubules and vesicles. Subunit p25 is part of the pointed-end subcomplex in dynactin that also includes p26, p27, and Arp11. This subcomplex interacts with membranous cargoes. p25 and p27 contain imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), indicating a left-handed parallel beta helix (LbH) structural domain. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.

>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=99.43  E-value=8.9e-13  Score=135.33  Aligned_cols=54  Identities=33%  Similarity=0.647  Sum_probs=50.5

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      .++||++|+||+|++|.++++||++++||+|++|.+|+|+++++.|.|......
T Consensus       380 ~~~Ig~~~~ig~~~~i~~~~~Ig~~~~ig~~s~v~~~v~~~~~~~g~~~~~~~~  433 (446)
T PRK14353        380 RTEIGAGAFIGSNSALVAPVTIGDGAYIASGSVITEDVPDDALALGRARQETKP  433 (446)
T ss_pred             CcEECCCcEECCCCEEeCCCEECCCCEECCCCEECccCCCCCEEEecCceEecc
Confidence            478999999999999999999999999999999999999999999999987653

>TIGR02353 NRPS_term_dom non-ribosomal peptide synthetase terminal domain of unknown function

Probab=99.42  E-value=1.2e-12  Score=142.23  Aligned_cols=101  Identities=28%  Similarity=0.435  Sum_probs=71.2

Q ss_pred             CcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCC---CCCCEECCCcEEccCCEECCCcEECCCCEECCC
Q 047635          260 GAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSG---DRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAG  336 (388)
Q Consensus       260 ~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g---~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGag  336 (388)
                      +++||+|+.|.+ ..+...+..+||+||+|+++|+|.+.....+   .+.++||+||+||++|+|.+|++|||+++||++
T Consensus       112 Ga~IG~~v~I~~-~~~~~~~li~IG~~~~I~~~v~l~~~~~~~~~l~~g~i~IG~~~~IG~~s~I~~g~~Igd~a~vgag  190 (695)
T TIGR02353       112 GAKIGKGVDIGS-LPPVCTDLLTIGAGTIVRKEVMLLGYRAERGRLHTGPVTLGRDAFIGTRSTLDIDTSIGDGAQLGHG  190 (695)
T ss_pred             CCEECCCCEEEe-eecccCCceEECCCCEECCCCEEEcccCCCCceeecCcEECCCcEECCCCEEcCCCEECCCCEECCC
Confidence            344444444433 1122233445555555555555543221111   135899999999999999999999999999999


Q ss_pred             CEECC--CCCCCcEEEecCcEEeccCC
Q 047635          337 SVVLK--DVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       337 sVV~~--dVp~~s~VvG~PArvi~~~~  361 (388)
                      |+|.+  +||+++++.|+|||++++..
T Consensus       191 S~V~~g~~v~~~~~~~G~PA~~~~~~~  217 (695)
T TIGR02353       191 SALQGGQSIPDGERWHGSPAQKTGADY  217 (695)
T ss_pred             CEecCCcccCCCCEEEeeCCEEecccc
Confidence            99998  89999999999999998744

This domain is found exclusively in non-ribosomal peptide synthetases and always as the final domain in the polypeptide. This domain is roughly 700 amino acids in size and is found in polypeptides roughly twice that size.

>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=99.41  E-value=1.9e-12  Score=133.00  Aligned_cols=54  Identities=35%  Similarity=0.721  Sum_probs=51.5

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      +++|||+|+||++++|.++++||++++||+|++|.+|||++++++|+|.++++.
T Consensus       383 ~~~Igd~~~ig~~~~i~~gv~Ig~~~~i~ag~~v~~~v~~~~~~~g~~~~~~~~  436 (448)
T PRK14357        383 PTFIEDGAFIGSNSSLVAPVRIGKGALIGAGSVITEDVPPYSLALGRARQIVKE  436 (448)
T ss_pred             CcEECCCCEECCCCEEeCCcEECCCCEEcCCCEECCcCCCCcEEEccccEEecc
Confidence            489999999999999999999999999999999999999999999999999753

>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=99.40  E-value=1.8e-12  Score=134.98  Aligned_cols=58  Identities=40%  Similarity=0.637  Sum_probs=53.1

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEE-ecCcEEeccCCCC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAV-GNPARLIGGKENP  363 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~Vv-G~PArvi~~~~~~  363 (388)
                      +++|||+|+||.+++|.++++||++++||+|++|.+|||++++++ |.|++.++.|.+.
T Consensus       399 ~~~IGd~~~iG~~~~i~~~~~Ig~~~~igags~v~~~v~~~~~~~~~~p~~~~~~~~~~  457 (482)
T PRK14352        399 RTTIGSHVRTGSDTMFVAPVTVGDGAYTGAGTVIREDVPPGALAVSEGPQRNIEGWVQR  457 (482)
T ss_pred             CCeECCCcEECCCCEEeCCCEECCCcEECCCCEEcCCCCCCcEEEeccccccccccccc
Confidence            489999999999999999999999999999999999999999865 8999999987643

>TIGR01172 cysE serine O-acetyltransferase

Probab=99.40  E-value=2.6e-12  Score=115.72  Aligned_cols=146  Identities=21%  Similarity=0.279  Sum_probs=97.4

Q ss_pred             HHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHhhhcHHHHHHHHHHHHH--Hhh
Q 047635          126 MQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLIA--IKE  203 (388)
Q Consensus       126 i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l~~~p~i~~~i~~Dl~a--~~~  203 (388)
                      |+.|.++...+||+..+++. .++.+|+|++...||+++++.....  ..+..+              +......  -.+
T Consensus         1 ~~~d~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~yR~~~~~~~~~~--~~l~~~--------------~~~~~~~~~~~~   63 (162)
T TIGR01172         1 IREDIRAVRERDPAARSYLE-VLLYYPGFHALWAYRFAHYLWKRGF--KFLARL--------------LSNFIRVLTGVD   63 (162)
T ss_pred             CHHHHHHHHhCCcccCCeEE-EEEECchHHHHHHHHHHHHHHHccH--HHHHHH--------------HHHHHheeeCeE
Confidence            47899999999999999887 6778999999999999999874211  011000              0000000  011


Q ss_pred             cCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEEcCCCCcEECCC---
Q 047635          204 RDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGET---  280 (388)
Q Consensus       204 rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~---  280 (388)
                      .+|.+......                                 .+.+..++.|+++++||++|.|++  +++||..   
T Consensus        64 I~~~~~Ig~~~---------------------------------~i~~~~g~~Ig~~~~IG~~~~I~~--~v~ig~~~~~  108 (162)
T TIGR01172        64 IHPGARIGRGV---------------------------------FIDHGTGVVIGETAVIGDDVTIYH--GVTLGGTGKE  108 (162)
T ss_pred             eCCCCEECCCe---------------------------------EECCCCeEEECCCCEECCCCEEcC--CCEECCCccc
Confidence            12222111110                                 011224577888888888888887  7777753   


Q ss_pred             -----cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEE
Q 047635          281 -----AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI  333 (388)
Q Consensus       281 -----~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~I  333 (388)
                           ++||++|.|+.+++|.+        .++||++|+||++++|.++  |.+++++
T Consensus       109 ~~~~~~~Ig~~v~Ig~~a~I~~--------~v~IG~~~~Iga~s~V~~d--vp~~~~~  156 (162)
T TIGR01172       109 KGKRHPTVGEGVMIGAGAKVLG--------NIEVGENAKIGANSVVLKD--VPPGATV  156 (162)
T ss_pred             cCCcCCEECCCcEEcCCCEEEC--------CcEECCCCEECCCCEECCC--CCCCCEE
Confidence                 57888888888888875        6899999999999999886  5666654

Cysteine biosynthesis

>cd04645 LbH_gamma_CA_like Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E

Probab=99.39  E-value=3.2e-12  Score=113.42  Aligned_cols=110  Identities=25%  Similarity=0.445  Sum_probs=85.2

Q ss_pred             eeeeEecCCcEECCceEEcCC-CCcEECCCcEECCCcEEcCC----CEECCCCccCCC---CCCEECCCcEEccCCEECC
Q 047635          252 VFSVDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSILHN----VTLGGTGKMSGD---RHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~Ig~g----vtIgg~~~i~g~---~~~~IGd~V~IGaga~Ilg  323 (388)
                      ...+.||+++.|++++.|... ..++||+++.|+++++|...    +.|+.+..+...   .+++||++++||+++.|.+
T Consensus        15 ~g~v~ig~~~~I~~~~~I~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~v~~   94 (153)
T cd04645          15 IGDVTLGEGSSVWFGAVLRGDVNPIRIGERTNIQDGSVLHVDPGYPTIIGDNVTVGHGAVLHGCTIGDNCLIGMGAIILD   94 (153)
T ss_pred             EEeEEECCCcEEcCCeEEECCCCceEECCCCEECCCcEEecCCCCCeEEcCCcEECCCcEEeeeEECCCCEECCCCEEcC
Confidence            345778888888888877642 35688888888887755332    344443333221   2479999999999999999


Q ss_pred             CcEECCCCEECCCCEECCC--CCCCcEEEecCcEEeccCC
Q 047635          324 NIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~~~  361 (388)
                      +++||++|+|+++++|.++  +|+++++.|.|++++++..
T Consensus        95 ~~~ig~~~~ig~~~~v~~~~~i~~~~~~~g~~~~~~~~~~  134 (153)
T cd04645          95 GAVIGKGSIVAAGSLVPPGKVIPPGSLVAGSPAKVVRELT  134 (153)
T ss_pred             CCEECCCCEECCCCEECCCCEeCCCCEEeCCcchhcccCC
Confidence            9999999999999999985  7999999999999988765

coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.

>cd03353 LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase

Probab=99.39  E-value=3.3e-12  Score=117.22  Aligned_cols=49  Identities=39%  Similarity=0.735  Sum_probs=46.8

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPA  354 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PA  354 (388)
                      .++|||+|+||.+++|.++++||++++|++|++|.+|||++++++|.|-
T Consensus       144 ~~vigd~~~ig~~~~i~~~~~Ig~~~~i~~gs~V~~~v~~~~~v~~~~~  192 (193)
T cd03353         144 RTVIGDNVFIGSNSQLVAPVTIGDGATIAAGSTITKDVPPGALAIARAR  192 (193)
T ss_pred             CCEECCCeEEccCCEEeCCcEECCCcEECCCCEEccccCCCCEEEeccC
Confidence            5789999999999999999999999999999999999999999999873

It is a bifunctional bacterial enzyme that catalyzes two consecutive steps in the formation of UDP-N-acetylglucosamine (UDP-GlcNAc), an important precursor in bacterial cell wall formation. The two enzymatic activities, uridyltransferase and acetyltransferase, are carried out by two independent domains. The C-terminal LbH domain possesses the acetyltransferase activity. It catalyzes the CoA-dependent acetylation of GlcN-1-phosphate to GlcNAc-1-phosphate. The LbH domain contains 10 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X. The acetyltransferase active site is located at the interface between two subunits of the active LbH trimer.

>COG1044 LpxD UDP-3-O-[3-hydroxymyristoyl]

Probab=99.38  E-value=8.9e-13  Score=130.03  Aligned_cols=117  Identities=31%  Similarity=0.420  Sum_probs=99.1

Q ss_pred             cceeeeeEecCCcEECCceEEcCCC--CcEECCCcEECCCcEEcCCCEECCCCccCC----CCCCEECCCcEEccCCEEC
Q 047635          249 VSEVFSVDIHPGAKIGRGLLFDHAT--GVVVGETAVIGDNVSILHNVTLGGTGKMSG----DRHPKIGNGVLVGAGTCIL  322 (388)
Q Consensus       249 ~~~~~gV~Ig~~a~IG~gv~I~~gt--gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Il  322 (388)
                      +.....|.|+++++||.|+.|+++.  .++||+++.|.+-|.|+|+|+||.++.+.+    ...++||++|.||..+.|.
T Consensus       197 i~q~g~V~Igd~VeIGanT~Idrga~~dTvIg~~~kIdN~vqIaHnv~IG~~~~I~~~vgIaGs~~IG~~v~igg~vgI~  276 (338)
T COG1044         197 IPQIGRVIIGDDVEIGANTTIDRGALDDTVIGEGVKIDNLVQIGHNVRIGEHCIIAGQVGIAGSVKIGKYVIIGGQVGIA  276 (338)
T ss_pred             cceeceEEECCceEEcccceeccccccCceecCCcEEcceeEEccccEECCCcEEeccceeeccceECCeEEECcceeec
Confidence            3445678999999999999999931  388888888888888888888887766544    2358999999999999999


Q ss_pred             CCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCCCCcc
Q 047635          323 GNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFM  365 (388)
Q Consensus       323 g~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~~~~  365 (388)
                      +...|||++.|++.+.|.++||++..+.|.|++..++|.+...
T Consensus       277 gh~~IgD~~~I~~~~~v~~~i~~~~~~gg~P~~p~k~w~k~~a  319 (338)
T COG1044         277 GHLEIGDGVTIGARSGVMASITEPGYSGGIPAQPIKEWLKTAA  319 (338)
T ss_pred             CceEEcCCCEEecccccccccCCCceeccCCCchHHHHHHHHH
Confidence            9999999999999999999999888888899999998875443

>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=99.38  E-value=2.4e-12  Score=131.27  Aligned_cols=56  Identities=34%  Similarity=0.516  Sum_probs=51.3

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEe-cCcEEeccCC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG-NPARLIGGKE  361 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG-~PArvi~~~~  361 (388)
                      .++|||+|+||+|++|.++++||++++||+|++|.+|||++++++| .|++..+++.
T Consensus       367 ~~~ig~~~~ig~~~~i~~~~~ig~~~~i~~g~~v~~~v~~~~~~~~~~~~~~~~~~~  423 (430)
T PRK14359        367 KTIIGKNVFIGSDTQLVAPVNIEDNVLIAAGSTVTKDVPKGSLAISRAPQKNIKNFY  423 (430)
T ss_pred             CCEECCCeEEcCCCEEeCCcEECCCCEECCCCEEccccCCCcEEEeccCceehhhHH
Confidence            4799999999999999999999999999999999999999999987 7777777664

>COG1043 LpxA Acyl-[acyl carrier protein]

Probab=99.38  E-value=6.6e-13  Score=125.12  Aligned_cols=112  Identities=29%  Similarity=0.360  Sum_probs=88.7

Q ss_pred             eeeeEecCCcEECCceEEcCCC-----------------CcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcE
Q 047635          252 VFSVDIHPGAKIGRGLLFDHAT-----------------GVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVL  314 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gt-----------------gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~  314 (388)
                      ...+.||++++|.+.++|..+|                 .+.|.++|+||++|++.+|++|++        |+.|||++.
T Consensus        79 ~T~l~IG~~n~IRE~vTi~~GT~~g~g~T~IGdnnl~May~HVAHDC~iGn~~ilaNnatLAG--------HV~igD~ai  150 (260)
T COG1043          79 PTRLIIGDNNTIREFVTIHRGTVQGGGVTRIGDNNLIMAYAHVAHDCVIGNNCILANNATLAG--------HVEVGDYAI  150 (260)
T ss_pred             ceEEEECCCCeEeeEEEEeccccCCceeEEECCCCEEEEeeeeeccceecCcEEEecCCeEec--------cEEECCEEE
Confidence            4557777777777777776654                 344445567777777777777766        999999999


Q ss_pred             EccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCCCCccccCCCC
Q 047635          315 VGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPS  371 (388)
Q Consensus       315 IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~~~~~~~~p~  371 (388)
                      ||..+-|-+-|+||++|+||..|-|.+||||++++.|+||++-+-...+-++.+.+.
T Consensus       151 iGG~saVHQFvrIG~~amiGg~S~v~~DVpPy~~~~Gn~a~l~GlN~vGlkRrgf~~  207 (260)
T COG1043         151 IGGLSAVHQFVRIGAHAMIGGLSAVSQDVPPYVIASGNHARLRGLNIVGLKRRGFSR  207 (260)
T ss_pred             EcCcceEEEEEEEcchheeccccccccCCCCeEEecCCcccccccceeeeeccCCCH
Confidence            999999999999999999999999999999999999999999765544443344444

>cd03360 LbH_AT_putative Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain

Probab=99.36  E-value=1.2e-11  Score=110.69  Aligned_cols=105  Identities=30%  Similarity=0.475  Sum_probs=79.9

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEEC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIG  334 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IG  334 (388)
                      ..+++++.||.++.|.+  +++|+.+++||++|.|+.++.|+.        +++||++|+|++++.|.++++||++|+||
T Consensus        91 ~~i~~~~~ig~~~~i~~--~~~i~~~~~ig~~~~i~~~~~i~~--------~~~ig~~~~i~~~~~i~~~~~ig~~~~ig  160 (197)
T cd03360          91 AVVSPSAVIGEGCVIMA--GAVINPDARIGDNVIINTGAVIGH--------DCVIGDFVHIAPGVVLSGGVTIGEGAFIG  160 (197)
T ss_pred             eEECCCCEECCCCEEcC--CCEECCCCEECCCeEECCCCEECC--------CCEECCCCEECCCCEEcCCcEECCCCEEC
Confidence            34566666777777665  667777777777777777777764        68999999999999999999999999999


Q ss_pred             CCCEECCC--CCCCcEEEecCcEEeccCCCCccccCCC
Q 047635          335 AGSVVLKD--VPPRTTAVGNPARLIGGKENPFMLDKIP  370 (388)
Q Consensus       335 agsVV~~d--Vp~~s~VvG~PArvi~~~~~~~~~~~~p  370 (388)
                      ++++|.++  +.+++ ++|..+.+.+.........+.|
T Consensus       161 ~~~~v~~~~~ig~~~-~v~~~~~v~~~~~~~~~~~g~p  197 (197)
T cd03360         161 AGATIIQGVTIGAGA-IIGAGAVVTKDVPDGSVVVGNP  197 (197)
T ss_pred             CCCEEcCCCEECCCC-EECCCCEEcCCCCCCCEEEecC
Confidence            99999987  46665 4588888877655444333433

The alignment contains 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. A few members are identified as NeuD, a sialic acid (Sia) O-acetyltransferase that is required for Sia synthesis and surface polysaccharide sialylation.

>TIGR03570 NeuD_NnaD sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family

Probab=99.33  E-value=1.6e-11  Score=111.37  Aligned_cols=107  Identities=29%  Similarity=0.447  Sum_probs=83.7

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEE
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI  333 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~I  333 (388)
                      ...|++++.||+++.|++  +++|+++++||++|.|+.+++|+.        +++||++++||++++|.++++||++|+|
T Consensus        93 ~a~i~~~~~ig~~~~i~~--~~~i~~~~~ig~~~~i~~~~~i~~--------~~~ig~~~~i~~~~~i~~~~~ig~~~~i  162 (201)
T TIGR03570        93 SAIVSPSASIGEGTVIMA--GAVINPDVRIGDNVIINTGAIVEH--------DCVIGDYVHIAPGVTLSGGVVIGEGVFI  162 (201)
T ss_pred             CeEECCCCEECCCCEECC--CCEECCCCEECCCcEECCCCEEcC--------CCEECCCCEECCCCEEeCCcEECCCCEE
Confidence            345667777777777766  677777777777777777777764        6899999999999999999999999999


Q ss_pred             CCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCC
Q 047635          334 GAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPS  371 (388)
Q Consensus       334 GagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~  371 (388)
                      |++++|.+++  .++++ +|.++.+.+....+....+.|+
T Consensus       163 g~~~~v~~~~~i~~~~~-i~~~~~v~~~~~~~~~~~g~pa  201 (201)
T TIGR03570       163 GAGATIIQGVTIGAGAI-VGAGAVVTKDIPDGGVVVGVPA  201 (201)
T ss_pred             CCCCEEeCCCEECCCCE-ECCCCEECCcCCCCCEEEeccC
Confidence            9999999874  66654 5778888776665555556664

These proteins contain repeats of the bacterial transferase hexapeptide (pfam00132), although often these do not register above the trusted cutoff.

>TIGR03532 DapD_Ac 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase

Probab=99.33  E-value=7.6e-12  Score=119.09  Aligned_cols=113  Identities=28%  Similarity=0.455  Sum_probs=78.3

Q ss_pred             eEecCCcEECCceEEcCC----CCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECC-------
Q 047635          255 VDIHPGAKIGRGLLFDHA----TGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILG-------  323 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~g----tgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg-------  323 (388)
                      ..|++++.|+.++.|+.+    .+++|+.+++||++|+|+++++|++        +++||++|+||++++|.+       
T Consensus        87 ~~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~I~~--------~s~Ig~~~~Ig~~~~I~~~~~~~~~  158 (231)
T TIGR03532        87 ARIEPGAIIRDQVIIGDNAVIMMGAVINIGAEIGEGTMIDMNAVLGG--------RATVGKNVHIGAGAVLAGVIEPPSA  158 (231)
T ss_pred             cEECCCCEEeCCeEECCCCEEecCcccCCCeEECCCCEEccccccCC--------CcEECCCcEEcCCcEEccccccccC
Confidence            344444444444444430    0444444555555555555555543        689999999999999985       


Q ss_pred             -CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          324 -NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       324 -~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                       +++||++|+||++++|.+++  .++ .++|..+.+.+.........++|++.++.
T Consensus       159 ~~v~IGd~v~IG~gsvI~~g~~Ig~~-~~IgagsvV~~di~~~~vv~G~PA~~i~~  213 (231)
T TIGR03532       159 KPVVIEDNVLIGANAVILEGVRVGKG-AVVAAGAIVTEDVPPNTVVAGVPAKVIKQ  213 (231)
T ss_pred             CCeEECCCcEECCCCEEcCCCEECCC-CEECCCCEEccccCCCcEEEecCCEEecc
Confidence             69999999999999998875  444 56677788888877777778999876654

Alternate name: tetrahydrodipicolinate N-acetyltransferase. Note that IUBMB lists this alternate name as the accepted name. Unfortunately, the related succinyl transferase acting on the same substrate (EC:2.3.1.117, TIGR00695) uses the opposite standard. We have decided to give these two enzymes names which more clearly indicated that they act on the same substrate.

>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]

Probab=99.32  E-value=1.1e-11  Score=125.30  Aligned_cols=52  Identities=35%  Similarity=0.610  Sum_probs=49.1

Q ss_pred             CEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEec
Q 047635          307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG  358 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~  358 (388)
                      ++|||+++||+|+.+..+|+||+++.||+||+|++|||++++.++.+-+..+
T Consensus       398 T~IGd~vFiGSns~LVAPV~IGd~a~iaAGStIT~DVp~~aLai~RarQ~~~  449 (460)
T COG1207         398 TIIGDNVFIGSNSQLVAPVTIGDGATIAAGSTITKDVPEGALAISRARQTNK  449 (460)
T ss_pred             eeecCCcEEccCCcEEeeEEecCCcEEcccceEcccCCCCceeEeecceeec
Confidence            8999999999999999999999999999999999999999999998777654

>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=99.31  E-value=1.3e-11  Score=127.54  Aligned_cols=52  Identities=29%  Similarity=0.540  Sum_probs=48.3

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEe
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI  357 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi  357 (388)
                      .+.|||+|+||.+++|.++++||++++|++|++|.+|||++++++|.+..+.
T Consensus       397 ~~~ig~~~~ig~~~~i~~~~~ig~~~~i~a~s~v~~~v~~~~~~~~~~~~~~  448 (459)
T PRK14355        397 RTVIEDDVFVGSDVQFVAPVTVGRNSLIAAGTTVTKDVPPDSLAIARSPQVN  448 (459)
T ss_pred             CcEecCCeEEcCCCEEeCCcEECCCCEECCCCEEcccCCCCcEEEeccceec
Confidence            4789999999999999999999999999999999999999999999776664

>COG2171 DapD Tetrahydrodipicolinate N-succinyltransferase [Amino acid transport and metabolism]

Probab=99.29  E-value=3.7e-12  Score=121.96  Aligned_cols=78  Identities=26%  Similarity=0.423  Sum_probs=67.6

Q ss_pred             CcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEe
Q 047635          274 GVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG  351 (388)
Q Consensus       274 gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG  351 (388)
                      .+++|..++||+||.|+.|+.|++.-...+...+.|||||+||+++.+..+|.+|+||+|++|++|++|+|.+..+.|
T Consensus       150 ~as~G~~a~VGkn~higgGa~I~GVLep~~a~Pv~IgdncliGAns~~veGV~vGdg~VV~aGv~I~~~tki~~~~~g  227 (271)
T COG2171         150 RASVGSCAQVGKNSHIGGGASIGGVLEPLQANPVIIGDNCLIGANSEVVEGVIVGDGCVVAAGVFITQDTKIYDRVAG  227 (271)
T ss_pred             eeeeeccEEECCCcccCCcceEeEEecCCCCCCeEECCccEeccccceEeeeEeCCCcEEecceEEeCCcceEEeecc
Confidence            667777788888888888888887433344557899999999999999999999999999999999999999988887

>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=99.28  E-value=2e-11  Score=125.58  Aligned_cols=51  Identities=29%  Similarity=0.595  Sum_probs=49.2

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEE
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARL  356 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArv  356 (388)
                      +++|||+++||.+++|.++++||++++||+|++|.+|||++++++|.|+.+
T Consensus       393 ~~~igd~~~ig~~s~i~~~~~ig~~~~v~~~~~v~~~~~~~~~~~~~~~~~  443 (458)
T PRK14354        393 KTIIGDNAFIGCNSNLVAPVTVGDNAYIAAGSTITKDVPEDALAIARARQV  443 (458)
T ss_pred             CCEECCCcEEccCCEEeCCcEECCCCEECCCCEECCCCCCCCEEEecccee
Confidence            578999999999999999999999999999999999999999999999887

>cd00208 LbetaH Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X)

Probab=99.27  E-value=3.4e-11  Score=93.03  Aligned_cols=77  Identities=39%  Similarity=0.575  Sum_probs=55.8

Q ss_pred             EECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEEC
Q 047635          262 KIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVL  340 (388)
Q Consensus       262 ~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~  340 (388)
                      +||+++.|++  +++|+..+.||++|.|+++++|++.........++||++++|+.+++|.++++||++++|+++++|.
T Consensus         2 ~ig~~~~i~~--~~~i~~~~~Ig~~~~I~~~~~i~~~~~~~~~~~~~ig~~~~v~~~~~i~~~~~ig~~~~i~~~s~v~   78 (78)
T cd00208           2 FIGEGVKIHP--KAVIRGPVVIGDNVNIGPGAVIGAATGPNEKNPTIIGDNVEIGANAVIHGGVKIGDNAVIGAGAVVT   78 (78)
T ss_pred             EECCCeEECC--CCEEeCcEEECCCCEECCCCEEEeccCCCccCCcEECCCcEECCCCEEeCCCEECCCCEECcCcEeC
Confidence            4555555554  4555556666666777666666653222122458999999999999999999999999999999874

Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms.

>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=99.27  E-value=3.2e-11  Score=124.21  Aligned_cols=56  Identities=36%  Similarity=0.626  Sum_probs=51.4

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                      .++|||+++||.+++|.++++||++++||+|++|.+|+|++++++|...+....++
T Consensus       398 ~~~igd~~~ig~~~~i~~~~~ig~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~  453 (456)
T PRK14356        398 RTVIGEGAFIGSNTALVAPVTIGDGALVGAGSVITKDVPDGSLAIARGRQKNLPRK  453 (456)
T ss_pred             CCEECCCcEEcCCCEEeCCcEECCCCEEcCCCEEeccCCCCcEEEEecceeehhhh
Confidence            47999999999999999999999999999999999999999999999888765543

>cd04649 LbH_THP_succinylT_putative Putative 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (THP succinyltransferase), C-terminal left-handed parallel alpha-helix (LbH) domain: This group is composed of mostly uncharacterized proteins containing an N-terminal domain of unknown function and a C-terminal LbH domain with similarity to THP succinyltransferase LbH

Probab=99.26  E-value=1.6e-11  Score=108.80  Aligned_cols=36  Identities=33%  Similarity=0.482  Sum_probs=33.7

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV  343 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV  343 (388)
                      .+.||++|+||+||+|  ++.||++|+||+|++|.++.
T Consensus        73 pV~IG~~~~IG~ga~I--gv~IG~~~vIGaGsvV~k~t  108 (147)
T cd04649          73 VISIGKRCLLGANSGI--GISLGDNCIVEAGLYVTAGT  108 (147)
T ss_pred             CEEECCCCEECCCCEE--eEEECCCCEECCCCEEeCCe
Confidence            4899999999999999  69999999999999999874

THP succinyltransferase catalyzes the conversion of tetrahydrodipicolinate and succinyl-CoA to N-succinyltetrahydrodipicolinate and CoA. It is the committed step in the succinylase pathway by which bacteria synthesize L-lysine and meso-diaminopimelate, a component of peptidoglycan. The enzyme is trimeric and displays the left-handed parallel alpha-helix (LbH) structural motif encoded by the hexapeptide repeat motif.

>cd03352 LbH_LpxD UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD): The enzyme catalyzes the transfer of 3-hydroxymyristic acid or 3-hydroxy-arachidic acid, depending on the organism, from the acyl carrier protein (ACP) to UDP-3-O-acyl-glucosamine to produce UDP-2,3-diacyl-GlcNAc

Probab=99.26  E-value=6.1e-11  Score=109.56  Aligned_cols=69  Identities=17%  Similarity=0.194  Sum_probs=53.2

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC--CCCCcEEEecCcEEeccCCCCccccCCCCcccc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGGKENPFMLDKIPSFTMD  375 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~  375 (388)
                      +++||++++|++++.|.++++||++|+||++++|..+  |++++++.+ .+.+.+.........+.|++.++
T Consensus       132 ~~~ig~~~~i~~~~~i~~~~~Ig~~~~ig~~~~v~~~~~ig~~~~i~~-~s~v~~~~~~~~~~~G~pa~~~~  202 (205)
T cd03352         132 NVRIGENCLIAAQVGIAGSTTIGDNVIIGGQVGIAGHLTIGDGVVIGA-GSGVTSIVPPGEYVSGTPAQPHR  202 (205)
T ss_pred             CCEECCCCEECCCCEEccccEECCCeEEcCCCEEeCCcEECCCCEEcC-CCEEeeECCCCCEEEeecCchhh
Confidence            4566666666666777788999999999999999988  588777555 47777777777777899987654

This constitutes the third step in the lipid A biosynthetic pathway in Gram-negative bacteria. LpxD is a homotrimer, with each subunit consisting of a novel combination of an N-terminal uridine-binding domain, a core lipid-binding left-handed parallel beta helix (LbH) domain, and a C-terminal alpha-helical extension. The LbH domain contains 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).

>PRK12461 UDP-N-acetylglucosamine acyltransferase; Provisional

Probab=99.22  E-value=6.5e-11  Score=114.28  Aligned_cols=119  Identities=21%  Similarity=0.343  Sum_probs=80.8

Q ss_pred             eeEecCCcEECCceEEcC----------CCCcEECCCcEECCCcEEcCC------CEECCCCccCC----CCCCEECCCc
Q 047635          254 SVDIHPGAKIGRGLLFDH----------ATGVVVGETAVIGDNVSILHN------VTLGGTGKMSG----DRHPKIGNGV  313 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~----------gtgVvIG~~~~IGdnV~Ig~g------vtIgg~~~i~g----~~~~~IGd~V  313 (388)
                      .+.||+++.|++++.|+.          .+.++||+++.|+++|+|..+      ++||.++.+..    .++++||++|
T Consensus        47 ~~~IG~~~~I~~~a~Ig~~pq~~~~~g~~~~v~IG~~~~I~e~vtI~~gt~~g~~t~IG~~~~i~~~~~I~hd~~IG~~v  126 (255)
T PRK12461         47 PTRIGKNNKIHQGAVVGDEPQDFTYKGEESRLEIGDRNVIREGVTIHRGTKGGGVTRIGNDNLLMAYSHVAHDCQIGNNV  126 (255)
T ss_pred             CCEECCCCEEccCcEeCCCCccccccCccceeEECCceEECCccEEecCcccCCcEEEcccceeccCcEECCCCEECCCc
Confidence            444555555555555542          124566666666666665433      33333333221    1468999999


Q ss_pred             EEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcc
Q 047635          314 LVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFT  373 (388)
Q Consensus       314 ~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~  373 (388)
                      +|+.++.+.++++||++|+||++++|.+.+  .+++++.| -+.+.++........+.|++.
T Consensus       127 ~i~~~~~i~g~v~Igd~a~Ig~~a~V~~~~~IG~~a~Vg~-gs~V~~dVpp~~i~~G~pa~~  187 (255)
T PRK12461        127 ILVNGALLAGHVTVGDRAIISGNCLVHQFCRIGALAMMAG-GSRISKDVPPYCMMAGHPTNV  187 (255)
T ss_pred             EECCCCccCCceEECCCeEEeCCCEECCCCEECCCcEECC-CceEeccCCCCeEEecCcceE
Confidence            999999999999999999999999999885  77766655 477777776666667888863

>TIGR02353 NRPS_term_dom non-ribosomal peptide synthetase terminal domain of unknown function

Probab=99.22  E-value=4.5e-11  Score=130.00  Aligned_cols=99  Identities=28%  Similarity=0.485  Sum_probs=69.3

Q ss_pred             eeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCC
Q 047635          252 VFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGA  331 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v  331 (388)
                      ..|+.||+++.|+.....++ ..++||+++.|+++|.|..+.  ..++... .++++||++|+||++|+|+++++|||+|
T Consensus       595 ~lGa~IG~~v~i~~~~~~~~-dlv~IGd~~~I~~~~~i~~h~--~~~~~~~-~~~v~IG~~~~IG~~a~V~~g~~IGd~a  670 (695)
T TIGR02353       595 LLGVKIGRGVYIDGTDLTER-DLVTIGDDSTLNEGSVIQTHL--FEDRVMK-SDTVTIGDGATLGPGAIVLYGVVMGEGS  670 (695)
T ss_pred             HCCCEECCCeEECCeeccCC-CCeEECCCCEECCCCEEEecc--ccccccc-cCCeEECCCCEECCCCEECCCCEECCCC
Confidence            44555555555554444433 134555555555555553321  1111111 2369999999999999999999999999


Q ss_pred             EECCCCEECC--CCCCCcEEEecCc
Q 047635          332 KIGAGSVVLK--DVPPRTTAVGNPA  354 (388)
Q Consensus       332 ~IGagsVV~~--dVp~~s~VvG~PA  354 (388)
                      .||++|+|.+  ++|+++++.|+||
T Consensus       671 ~Ig~~SvV~~g~~vp~~s~~~G~Pa  695 (695)
T TIGR02353       671 VLGPDSLVMKGEEVPAHTRWRGNPA  695 (695)
T ss_pred             EECCCCEEcCCcccCCCCEEEeccC
Confidence            9999999998  7999999999997

This domain is found exclusively in non-ribosomal peptide synthetases and always as the final domain in the polypeptide. This domain is roughly 700 amino acids in size and is found in polypeptides roughly twice that size.

>TIGR01853 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Probab=99.22  E-value=5.8e-11  Score=118.33  Aligned_cols=69  Identities=22%  Similarity=0.251  Sum_probs=47.1

Q ss_pred             CEECCCcEEccCCEECCCcEECCCCEECCCCEECCC--CCCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      ++||++|.|++++.|.++++||++|+||+++.|...  |++++++.+. +.+.+..+.+..+.+.|+..+++
T Consensus       236 v~IG~~~~I~~~~~iag~~~IG~~~~ig~~~~I~~~v~Ig~~~~ig~~-s~V~~~v~~~~~~~G~pa~~~~~  306 (324)
T TIGR01853       236 CRIGENCIIVAQVGIAGSTKIGRNVIIGGQVGVAGHLEIGDNVTIGAK-SGVTKSIPPPGVYGGIPARPNKE  306 (324)
T ss_pred             CEECCCcEECCcceEcCccEECCCeEEccccccccCCEECCCCEEccC-CEeCCcCCCCcEEEccCccHHHH
Confidence            344444444444455556777777777777888766  4777766655 88888888777778899877653

This model describes LpxD, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species. This protein represents the third step from UDP-N-acetyl-D-glucosamine. The group added at this step generally is 14:0(3-OH) (myristate) but may vary; in Aquifex it appears to be 16:0(3-OH) (palmitate).

>cd03358 LbH_WxcM_N_like WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain

Probab=99.22  E-value=1.1e-10  Score=98.35  Aligned_cols=90  Identities=24%  Similarity=0.339  Sum_probs=58.0

Q ss_pred             EECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE---------------CCCcEECCCCEECCCCEEC
Q 047635          276 VVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI---------------LGNIKIGDGAKIGAGSVVL  340 (388)
Q Consensus       276 vIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I---------------lg~V~IGd~v~IGagsVV~  340 (388)
                      +|+.+++||++|.|++++.|+.        +++||++|+|++++.+               .++++||++|+||++++|.
T Consensus        12 ~i~~~~~Ig~~~~I~~~~~i~~--------~~~Ig~~~~I~~~~~i~~~~~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~v~   83 (119)
T cd03358          12 FIENDVKIGDNVKIQSNVSIYE--------GVTIEDDVFIGPNVVFTNDLYPRSKIYRKWELKGTTVKRGASIGANATIL   83 (119)
T ss_pred             EECCCcEECCCcEECCCcEEeC--------CeEECCCcEEcCCeEEecCCCCccccccccccCCcEECCCcEECcCCEEe
Confidence            3444444444444444444432        3455555555555554               5678999999999999997


Q ss_pred             CC--CCCCcEEEecCcEEeccCCCCccccCCCCccc
Q 047635          341 KD--VPPRTTAVGNPARLIGGKENPFMLDKIPSFTM  374 (388)
Q Consensus       341 ~d--Vp~~s~VvG~PArvi~~~~~~~~~~~~p~~~~  374 (388)
                      .+  +++++ .+|..+.+.+..+.+....+.|++.+
T Consensus        84 ~~~~ig~~~-~i~~~~~v~~~i~~~~~~~G~pa~~~  118 (119)
T cd03358          84 PGVTIGEYA-LVGAGAVVTKDVPPYALVVGNPARII  118 (119)
T ss_pred             CCcEECCCC-EEccCCEEeCcCCCCeEEecCcceec
Confidence            75  35654 55666777777666666678888654

WcxM is thought to be bifunctional, catalyzing both the isomerization and transacetylation reactions of keto-hexoses. It contains an N-terminal LbH domain responsible for the transacetylation function and a C-terminal isomerase domain. The LbH domain contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), typical of enzymes with acyltransferase activity.

>PRK00892 lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional

Probab=99.20  E-value=8.7e-11  Score=117.65  Aligned_cols=69  Identities=19%  Similarity=0.162  Sum_probs=50.7

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC--CCCCcEEEecCcEEeccCCC-CccccCCCCcccc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGGKEN-PFMLDKIPSFTMD  375 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~~~~-~~~~~~~p~~~~~  375 (388)
                      +++||+++.|++++.|.++++||++|+||.++.|..+  |.+++++.+. +.+.+.... +....++|+...+
T Consensus       243 ~~~IG~~~~i~~~~~i~~~~~iG~~~~ig~~~~i~~~~~ig~~~~i~~~-s~v~~~i~~~~~~~~G~pa~~~~  314 (343)
T PRK00892        243 NVVIGRHTAIAAQVGIAGSTKIGRYCMIGGQVGIAGHLEIGDGVTITAM-SGVTKSIPEPGEYSSGIPAQPNK  314 (343)
T ss_pred             CCEECCCcEEeeeeeecCCCEECCceEECCCCEEcCCCEECCCCEEecC-CeeCCccCCCCeEEEeecCchHH
Confidence            4566666666666667778888899999999999888  5888888777 666666665 4444688887653

>TIGR01852 lipid_A_lpxA acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase

Probab=99.19  E-value=2e-10  Score=110.43  Aligned_cols=100  Identities=17%  Similarity=0.207  Sum_probs=65.7

Q ss_pred             CcEECCCcEECCCcEEcC-------CCEECCCCccCCC----CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC
Q 047635          274 GVVVGETAVIGDNVSILH-------NVTLGGTGKMSGD----RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD  342 (388)
Q Consensus       274 gVvIG~~~~IGdnV~Ig~-------gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d  342 (388)
                      .++||+++.|+++|+|..       +++||.+..+...    ++++||++|+|+.++.|.++++||++|+||++++|.++
T Consensus        76 ~v~IG~~~~I~~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~~~Igd~~~Ig~~~~i~~~  155 (254)
T TIGR01852        76 ELIIGDNNTIREFVTINRGTASGGGVTRIGNNNLLMAYSHIAHDCVVGNHVILANNATLAGHVEVGDYAIIGGLVAVHQF  155 (254)
T ss_pred             eEEECCCCEECCCCEECCcccCCCCcEEECCCCEECCCCEEccCCEECCCCEECCCCEECCCcEECCCcEEeccCEECCC
Confidence            355555555555555432       2334433333221    46789999999999999999999999999999999988


Q ss_pred             C--CCCcEEEecCcEEeccCCCCccccCCCCccc
Q 047635          343 V--PPRTTAVGNPARLIGGKENPFMLDKIPSFTM  374 (388)
Q Consensus       343 V--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~  374 (388)
                      +  .+++++.+ .+.+.+.........+.|++.+
T Consensus       156 v~Ig~~~~Ig~-~s~V~~~i~~~~~~~G~pa~~~  188 (254)
T TIGR01852       156 VRIGRYAMIGG-LSAVSKDVPPYGLVEGNRARLR  188 (254)
T ss_pred             cEECCCCEEee-eeeEeeecCCCcEEecCcCeec
Confidence            4  67765554 4555555554444456777654

This model describes LpxA, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species, but this protein represents the first step (from UDP-N-acetyl-D-glucosamine) and appears to be conserved in function. Proteins from this family contain many copies of the bacterial transferase hexapeptide repeat (pfam00132).

>cd00710 LbH_gamma_CA Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site

Probab=99.19  E-value=1.8e-10  Score=103.93  Aligned_cols=97  Identities=26%  Similarity=0.399  Sum_probs=69.0

Q ss_pred             eeeeEecCCcEECCceEEcCC--CCcEECCCcEECCCcEE----cCCCEECCCCccCCC----CCCEECCCcEEccCCEE
Q 047635          252 VFSVDIHPGAKIGRGLLFDHA--TGVVVGETAVIGDNVSI----LHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCI  321 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~g--tgVvIG~~~~IGdnV~I----g~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~I  321 (388)
                      ...+.||+++.|++++.|...  ..++||+++.|+++++|    ++.+.||.+..+...    .+++||++|+||+++.|
T Consensus        18 ~~~v~iG~~~~I~~~~~i~~~~~~~v~IG~~~~I~~~~~i~~~~~~~v~Ig~~~~I~~~~~i~g~~~Ig~~~~Ig~~~~I   97 (167)
T cd00710          18 IGDVIIGDNVFVGPGASIRADEGTPIIIGANVNIQDGVVIHALEGYSVWIGKNVSIAHGAIVHGPAYIGDNCFIGFRSVV   97 (167)
T ss_pred             EeeEEECCCcEECCCcEEeCCCCCcEEECCCCEECCCeEEEecCCCCEEECCCceECCCCEEeCCEEECCCCEECCCCEE
Confidence            445777777777777777652  24677777777777766    233444444333321    25899999999999998


Q ss_pred             CCCcEECCCCEECCCCEECC-CCCCCcEE
Q 047635          322 LGNIKIGDGAKIGAGSVVLK-DVPPRTTA  349 (388)
Q Consensus       322 lg~V~IGd~v~IGagsVV~~-dVp~~s~V  349 (388)
                      . +++||++|+||++++|.+ .+++++++
T Consensus        98 ~-~~~Ig~~~~Ig~~s~i~~~~i~~~~~v  125 (167)
T cd00710          98 F-NAKVGDNCVIGHNAVVDGVEIPPGRYV  125 (167)
T ss_pred             E-CCEECCCCEEcCCCEEeCCEeCCCCEE
Confidence            6 799999999999999975 56777765

They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three distinct groups of carbonic anhydrases - alpha, beta and gamma - which show no significant sequence identity or structural similarity. Gamma CAs are homotrimeric enzymes, with each subunit containing a left-handed parallel beta helix (LbH) structural domain.

>cd03350 LbH_THP_succinylT 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (also called THP succinyltransferase): THDP N-succinyltransferase catalyzes the conversion of tetrahydrodipicolinate and succinyl-CoA to N-succinyltetrahydrodipicolinate and CoA

Probab=99.19  E-value=3.3e-10  Score=99.12  Aligned_cols=93  Identities=27%  Similarity=0.316  Sum_probs=64.4

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECC--------Cc
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILG--------NI  325 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg--------~V  325 (388)
                      ++.|++++.|++++.|..  ++.|+.++.||+++.|+++++|+.        +++||++|.|+.++.|.+        ++
T Consensus         7 ~~~i~~~~~Ig~~~~I~~--~~~i~~~~~IG~~~~I~~~~~I~~--------~~~IG~~~~I~~~~~igg~~~~~~~~~v   76 (139)
T cd03350           7 GAIIRDGAFIGPGAVLMM--PSYVNIGAYVDEGTMVDSWATVGS--------CAQIGKNVHLSAGAVIGGVLEPLQATPV   76 (139)
T ss_pred             CcEECCCCEECCCCEECC--CCEEccCCEECCCeEEcCCCEECC--------CCEECCCCEECCCCEECCcccccccCCe
Confidence            445666666666666655  566777777777777777777765        578888888888888863        48


Q ss_pred             EECCCCEECCCCEECCCC--CCCcEEEecCcEEe
Q 047635          326 KIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLI  357 (388)
Q Consensus       326 ~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi  357 (388)
                      +||++|+||++++|..++  .+++ ++|.-+.+.
T Consensus        77 ~Ig~~~~Ig~~a~I~~gv~Ig~~~-~Ig~g~~V~  109 (139)
T cd03350          77 IIEDDVFIGANCEVVEGVIVGKGA-VLAAGVVLT  109 (139)
T ss_pred             EECCCCEECCCCEECCCCEECCCC-EEcCCCEEc
Confidence            888888888888887763  4443 333344443

It is the committed step in the succinylase pathway by which bacteria synthesize L-lysine and meso-diaminopimelate, a component of peptidoglycan. The enzyme is homotrimeric and each subunit contains an N-terminal region with alpha helices and hairpin loops, as well as a C-terminal region with a left-handed parallel alpha-helix (LbH) structural motif encoded by hexapeptide repeat motifs.

>TIGR03535 DapD_actino 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase

Probab=99.18  E-value=1e-10  Score=114.29  Aligned_cols=91  Identities=22%  Similarity=0.330  Sum_probs=61.4

Q ss_pred             eeeeEecCCcEECCceEEcCCCC--------cEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECC
Q 047635          252 VFSVDIHPGAKIGRGLLFDHATG--------VVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gtg--------VvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg  323 (388)
                      ..|..||+++.|..+++|..+.+        ..|+++|+||++|.|+.+++|++.-...+...+.||++|+||+||.|  
T Consensus       163 RlGAyLGeGtvVm~~a~VN~nAgtIG~~iI~g~I~HdvvIGd~~~IgpGvsI~G~LsGg~~~pV~IGe~~~IGagA~I--  240 (319)
T TIGR03535       163 RLGAHLAEGTTVMHEGFVNFNAGTLGASMVEGRISAGVVVGDGSDIGGGASIMGTLSGGGKEVISIGERCLLGANSGL--  240 (319)
T ss_pred             eeccEECCCCEEcCCCEEccCceEecCceEEEEEccCCEECCCCEECCCceecceecCCCcccEEECCCcEECCCCEE--
Confidence            34555555555555555544221        23455566666666666666554321122234899999999999999  


Q ss_pred             CcEECCCCEECCCCEECCCCC
Q 047635          324 NIKIGDGAKIGAGSVVLKDVP  344 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~dVp  344 (388)
                      ++.||++|+||+|++|.++.+
T Consensus       241 GI~IGd~~VVGAGaVVtkgT~  261 (319)
T TIGR03535       241 GISLGDDCVVEAGLYVTAGTK  261 (319)
T ss_pred             CeEECCCCEECCCCEEeCCeE
Confidence            899999999999999998753

Alternate name: tetrahydrodipicolinate N-succinyltransferase.

>PRK05289 UDP-N-acetylglucosamine acyltransferase; Provisional

Probab=99.16  E-value=1.2e-10  Score=112.59  Aligned_cols=68  Identities=19%  Similarity=0.234  Sum_probs=50.5

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTM  374 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~  374 (388)
                      +++||++|.|+.++.+.++++||++|+||++++|.+++  .+++++.+ -+.+.++........+.|++..
T Consensus       123 ~~~IG~~v~i~~~~~i~g~v~Igd~~~Ig~~~~i~~~v~Ig~~~~Ig~-gs~V~~di~~~~~~~G~pa~~~  192 (262)
T PRK05289        123 DCVVGNHVILANNATLAGHVEVGDYAIIGGLTAVHQFVRIGAHAMVGG-MSGVSQDVPPYVLAEGNPARLR  192 (262)
T ss_pred             eEEECCCeEECCccccccccccCCcEEEeecceecCCCEECCCCEEee-ecceeccCCCCeEEecccCeEe
Confidence            45666666667777777788999999999999999886  66665554 4888877766666678887653

>COG1044 LpxD UDP-3-O-[3-hydroxymyristoyl]

Probab=99.14  E-value=1.4e-10  Score=114.73  Aligned_cols=20  Identities=30%  Similarity=0.582  Sum_probs=10.6

Q ss_pred             CcEECCCCEECCCCEECCCC
Q 047635          324 NIKIGDGAKIGAGSVVLKDV  343 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~dV  343 (388)
                      +|+|||+|.||+++.|-+..
T Consensus       202 ~V~Igd~VeIGanT~Idrga  221 (338)
T COG1044         202 RVIIGDDVEIGANTTIDRGA  221 (338)
T ss_pred             eEEECCceEEcccceecccc
Confidence            35555555555555555543

>PRK10502 putative acyl transferase; Provisional

Probab=99.13  E-value=2.5e-10  Score=104.70  Aligned_cols=113  Identities=19%  Similarity=0.280  Sum_probs=81.8

Q ss_pred             eeeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE---------
Q 047635          251 EVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI---------  321 (388)
Q Consensus       251 ~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I---------  321 (388)
                      ..++..||+++.|++++.|..+..+.||+++.||++|.|....            .++||++|.|+.++.|         
T Consensus        48 r~~ga~iG~~~~I~~~a~i~~~~~~~IG~~~~Ig~~~~I~~~~------------~v~IG~~~~I~~~~~I~~~~h~~~~  115 (182)
T PRK10502         48 RLFGAKIGKGVVIRPSVRITYPWKLTIGDYAWIGDDVWLYNLG------------EITIGAHCVISQKSYLCTGSHDYSD  115 (182)
T ss_pred             HHhccccCCCcEEcCCEEEecCCeEEECCCeEECCCceecccC------------ceEECCCcEECCCeEEECCCCCCcC
Confidence            3577889999999998888765567777777777777665311            3455566655555554         


Q ss_pred             ------CCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          322 ------LGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       322 ------lg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                            .++++||++|+||++++|..++  .+++ ++|..+.+.+.........+.|++.++.
T Consensus       116 ~~~~~~~~~i~Igd~~~Ig~~a~I~~Gv~Ig~~~-vIga~svV~~~v~~~~v~~G~Pa~~ik~  177 (182)
T PRK10502        116 PHFDLNTAPIVIGEGCWLAADVFVAPGVTIGSGA-VVGARSSVFKSLPANTICRGNPAVPIRP  177 (182)
T ss_pred             CCcccccCCEEEcCCcEEcCCCEEcCCCEECCCC-EECCCCEEecccCCCcEEECCcceEecc
Confidence                  3568999999999999998875  5654 5556788888877777778999976643

>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=99.13  E-value=3e-10  Score=118.63  Aligned_cols=47  Identities=40%  Similarity=0.661  Sum_probs=44.2

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEec
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGN  352 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~  352 (388)
                      .++||++|+||++++|.++++||++++||+|++|.+|+|+++++++.
T Consensus       399 ~~~Ig~~~~ig~~~~i~~~~~Ig~~~~i~~gs~v~~~v~~~~~~~~~  445 (481)
T PRK14358        399 QSKVGAGVFIGSNTTLIAPRVVGDAAFIAAGSAVHDDVPEGAMAVAR  445 (481)
T ss_pred             CCEECCCeEEcCCCEEcCCcEECCCCEECCCCEEecccCCCCEEEec
Confidence            47999999999999999999999999999999999999999999863

>PRK09527 lacA galactoside O-acetyltransferase; Reviewed

Probab=99.12  E-value=3.8e-10  Score=105.55  Aligned_cols=108  Identities=19%  Similarity=0.260  Sum_probs=77.9

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEEC--------------
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCIL--------------  322 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Il--------------  322 (388)
                      +|+++.|...+.++.      |.++.||++|.|+.+|+|.+.      ..++||++|.||++++|.              
T Consensus        58 ig~~~~I~~~~~~~~------g~ni~IG~~v~In~~~~I~d~------~~I~IGd~v~Ig~~v~I~~~~h~~~~~~r~~g  125 (203)
T PRK09527         58 VGENAWVEPPVYFSY------GSNIHIGRNFYANFNLTIVDD------YTVTIGDNVLIAPNVTLSVTGHPVHHELRKNG  125 (203)
T ss_pred             cCCCcEEcCCEEEee------CCCcEEcCCcEECCCcEEecC------CCEEECCCCEECCCCEEEeCCCCCChhhcccc
Confidence            677777777776654      344555555555555555331      246888888888888885              


Q ss_pred             ----CCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcccccc
Q 047635          323 ----GNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHT  377 (388)
Q Consensus       323 ----g~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~~  377 (388)
                          .+++||++|+||++++|..++  .++ .++|.-+.+.+.....+...+.|++.++..
T Consensus       126 ~~~~~pi~IGd~v~IG~~~~I~~gv~IG~~-~vIgagsvV~kdvp~~~v~~G~PAk~i~~~  185 (203)
T PRK09527        126 EMYSFPITIGNNVWIGSHVVINPGVTIGDN-SVIGAGSVVTKDIPPNVVAAGVPCRVIREI  185 (203)
T ss_pred             ccccCCeEECCCcEECCCCEEcCCCEECCC-CEECCCCEEcccCCCCcEEEeeCCEEeccC
Confidence                248999999999999999885  554 466777888888777777789999776553

>cd03351 LbH_UDP-GlcNAc_AT UDP-N-acetylglucosamine O-acyltransferase (UDP-GlcNAc acyltransferase): Proteins in this family catalyze the transfer of (R)-3-hydroxymyristic acid from its acyl carrier protein thioester to UDP-GlcNAc

Probab=99.12  E-value=4.4e-10  Score=108.02  Aligned_cols=98  Identities=19%  Similarity=0.253  Sum_probs=63.6

Q ss_pred             CcEECCCcEECCCcEEcC-------CCEECCCCccCC----CCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC
Q 047635          274 GVVVGETAVIGDNVSILH-------NVTLGGTGKMSG----DRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD  342 (388)
Q Consensus       274 gVvIG~~~~IGdnV~Ig~-------gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d  342 (388)
                      +++||+++.|+++|+|..       .++||+++.+..    ..+++||++|+|++++.|.++++||++|+||++++|.++
T Consensus        77 ~v~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~~~i~~~  156 (254)
T cd03351          77 RLEIGDNNTIREFVTIHRGTAQGGGVTRIGNNNLLMAYVHVAHDCVIGNNVILANNATLAGHVEIGDYAIIGGLSAVHQF  156 (254)
T ss_pred             eEEECCCCEECCccEEeccccCCCCceEECCCCEECCCCEECCCCEECCCcEECCCccccCCcEeCCCcEECCcceECCC
Confidence            345555555555554432       133333332221    135788888888888888999999999999999999998


Q ss_pred             C--CCCcEEEecCcEEeccCCCCccccCCCCc
Q 047635          343 V--PPRTTAVGNPARLIGGKENPFMLDKIPSF  372 (388)
Q Consensus       343 V--p~~s~VvG~PArvi~~~~~~~~~~~~p~~  372 (388)
                      +  .+++++.| -+.+.+.........+.|+.
T Consensus       157 v~Ig~~~~Ig~-~s~V~~~i~~~~~~~G~~~~  187 (254)
T cd03351         157 CRIGRHAMVGG-GSGVVQDVPPYVIAAGNRAR  187 (254)
T ss_pred             cEECCCCEECc-CCEEeeecCCCeEEEccCCe
Confidence            6  67766544 46666655444444566664

It is the first enzyme in the lipid A biosynthetic pathway and is also referred to as LpxA. Lipid A is essential for the growth of Escherichia coli and related bacteria. It is also essential for maintaining the integrity of the outer membrane. UDP-GlcNAc acyltransferase is a homotrimer of left-handed parallel beta helix (LbH) subunits. Each subunit contains an N-terminal LbH region with 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), and a C-terminal alpha-helical region.

>cd04649 LbH_THP_succinylT_putative Putative 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (THP succinyltransferase), C-terminal left-handed parallel alpha-helix (LbH) domain: This group is composed of mostly uncharacterized proteins containing an N-terminal domain of unknown function and a C-terminal LbH domain with similarity to THP succinyltransferase LbH

Probab=99.09  E-value=5.7e-10  Score=98.91  Aligned_cols=94  Identities=21%  Similarity=0.219  Sum_probs=70.4

Q ss_pred             eeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEc----CCCEECCCCccCCCCCCEECCCcEEccCCEECCC----
Q 047635          253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSIL----HNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGN----  324 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig----~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~----  324 (388)
                      .+..+.+.+.||+|+.|.+  +.++..++.||++|.|.    .+++|+.        ++.||++|.|.  +.+.++    
T Consensus         6 ~~~~V~~~a~IG~GtvI~~--gavV~~~a~IG~~~iIn~~ig~~a~Igh--------d~~IG~~~~I~--~~l~G~~~~p   73 (147)
T cd04649           6 DADRVRLGAYLAEGTTVMH--EGFVNFNAGTLGNCMVEGRISSGVIVGK--------GSDVGGGASIM--GTLSGGGNNV   73 (147)
T ss_pred             CCCEECCCCEECCCcEECC--CCEEccCCEECCCeEECCcccCCEEECC--------CCEECCCCEEE--EECCCCcccC
Confidence            4556777777787777777  77777778888888776    6666664        67777777777  556677    


Q ss_pred             cEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          325 IKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       325 V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      +.||++|+||+|++|...|++++ ++|..+.+++.
T Consensus        74 V~IG~~~~IG~ga~Igv~IG~~~-vIGaGsvV~k~  107 (147)
T cd04649          74 ISIGKRCLLGANSGIGISLGDNC-IVEAGLYVTAG  107 (147)
T ss_pred             EEECCCCEECCCCEEeEEECCCC-EECCCCEEeCC
Confidence            99999999999999965667765 45666766653

THP succinyltransferase catalyzes the conversion of tetrahydrodipicolinate and succinyl-CoA to N-succinyltetrahydrodipicolinate and CoA. It is the committed step in the succinylase pathway by which bacteria synthesize L-lysine and meso-diaminopimelate, a component of peptidoglycan. The enzyme is trimeric and displays the left-handed parallel alpha-helix (LbH) structural motif encoded by the hexapeptide repeat motif.

>cd03357 LbH_MAT_GAT Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates

Probab=99.07  E-value=1.8e-09  Score=97.66  Aligned_cols=104  Identities=21%  Similarity=0.294  Sum_probs=67.7

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE---------------
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI---------------  321 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I---------------  321 (388)
                      +++++.|+.++.+..+.++.||++      |.|+++++|.+.      ..++||++|+|+.+++|               
T Consensus        45 ~~~~~~i~~~~~~~~~~~i~IG~~------v~I~~~~~i~~~------~~i~IG~~v~Ig~~~~I~~~~h~~~~~~~~~~  112 (169)
T cd03357          45 VGENVYIEPPFHCDYGYNIHIGDN------FYANFNCTILDV------APVTIGDNVLIGPNVQIYTAGHPLDPEERNRG  112 (169)
T ss_pred             cCCCCEEcCCEEEEeCCcCEECCC------ceEcCCEEEecc------CcEEECCCCEECCCCEEEeCCCCCChhHcccc
Confidence            566666666665544334444444      444444444321      14577777777777777               


Q ss_pred             ---CCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcc
Q 047635          322 ---LGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFT  373 (388)
Q Consensus       322 ---lg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~  373 (388)
                         .++++||++|+||++++|..++  .++ .++|..+.+.+.....+...+.|++.
T Consensus       113 ~~~~~~v~IG~~~~Ig~~a~I~~gv~Ig~~-~~VgagavV~~~vp~~~vv~G~PAkv  168 (169)
T cd03357         113 LEYAKPITIGDNVWIGGGVIILPGVTIGDN-SVIGAGSVVTKDIPANVVAAGNPARV  168 (169)
T ss_pred             ceecCCcEeCCCEEECCCCEEeCCCEECCC-CEECCCCEEccccCCCcEEEccccEE
Confidence               4578999999999999998875  555 46677788888777776667888753

MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).

>TIGR00965 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase

Probab=99.06  E-value=9.1e-10  Score=106.63  Aligned_cols=94  Identities=22%  Similarity=0.308  Sum_probs=73.8

Q ss_pred             eeeeEecCCcEECCceEEcCCCCcEECC-----CcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEEC----
Q 047635          252 VFSVDIHPGAKIGRGLLFDHATGVVVGE-----TAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCIL----  322 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gtgVvIG~-----~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Il----  322 (388)
                      ..++.|.|++.|+++++|+.  +++|..     ++.||++|+|..+++||.        ++.||+||.|++++.|.    
T Consensus        98 ~~~~rv~p~a~i~~ga~Ig~--~vvI~p~~Vniga~IGeGt~I~~~a~IG~--------~v~IG~nv~I~~g~~IgG~~e  167 (269)
T TIGR00965        98 KAGFRVVPGAAVRQGAFIAK--NVVLMPSYVNIGAYVDEGTMVDTWATVGS--------CAQIGKNVHLSGGVGIGGVLE  167 (269)
T ss_pred             cCCEEECCCcEECCCcEECC--CCEEeeeEEcCCcEECCCCEECCCcEECC--------CCEECCCCEEcCCcccCCCcc
Confidence            45899999999999999988  776654     356777777777777775        68999999999999886    


Q ss_pred             ----CCcEECCCCEECCCCEECCCC--CCCcEEEecCcEE
Q 047635          323 ----GNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARL  356 (388)
Q Consensus       323 ----g~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArv  356 (388)
                          .+++||++|+||++++|..++  .+++ ++|..+.+
T Consensus       168 p~~~~~ViIgDnv~IGa~a~I~~GV~IG~ga-vIGaGavI  206 (269)
T TIGR00965       168 PLQANPTIIEDNCFIGARSEIVEGVIVEEGS-VISMGVFI  206 (269)
T ss_pred             cCCCCCeEECCCCEECCCCEEcCCCEECCCC-EEeCCCEE
Confidence                458999999999999999885  4443 44444444

The closely related TabB protein of Pseudomonas syringae (pv. tabaci) appears to act in the biosynthesis of tabtoxin rather than lysine. The trusted cutoff is set high enough to exclude this gene. Sequences below trusted also include a version of this enzyme which apparently utilize acetate rather than succinate (EC: 2.3.1.89).

>PRK10092 maltose O-acetyltransferase; Provisional

Probab=99.05  E-value=2.3e-09  Score=98.76  Aligned_cols=93  Identities=17%  Similarity=0.260  Sum_probs=68.1

Q ss_pred             EECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEEC------------------CCcEECCCCEECCCC
Q 047635          276 VVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCIL------------------GNIKIGDGAKIGAGS  337 (388)
Q Consensus       276 vIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Il------------------g~V~IGd~v~IGags  337 (388)
                      .+|.++.||+++.|+.+|+|++.      ..++|||+|.|+.+++|.                  ++++||++|+||+++
T Consensus        69 ~~g~~i~iG~~~~in~~~~i~d~------~~I~IGd~v~I~~~v~i~t~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a  142 (183)
T PRK10092         69 DYGYNIFLGNNFYANFDCVMLDV------CPIRIGDNCMLAPGVHIYTATHPLDPVARNSGAELGKPVTIGNNVWIGGRA  142 (183)
T ss_pred             eecCCcEEcCCcEECCceEEecC------ceEEECCCCEECCCCEEEcCCCCCChHHccccceecCCeEECCCcEECCCC
Confidence            44555555555666666655542      135888888888888884                  679999999999999


Q ss_pred             EECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcccc
Q 047635          338 VVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMD  375 (388)
Q Consensus       338 VV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~  375 (388)
                      +|..++  .+++ ++|.-+.+.+.........+.|++.++
T Consensus       143 ~I~~gv~IG~~~-vIgagsvV~~di~~~~i~~G~PAr~i~  181 (183)
T PRK10092        143 VINPGVTIGDNV-VVASGAVVTKDVPDNVVVGGNPARIIK  181 (183)
T ss_pred             EECCCCEECCCC-EECCCCEEccccCCCcEEEecCcEEee
Confidence            999875  5554 457778888877777777899997664

>PRK13627 carnitine operon protein CaiE; Provisional

Probab=99.05  E-value=2.1e-09  Score=99.98  Aligned_cols=89  Identities=18%  Similarity=0.296  Sum_probs=63.3

Q ss_pred             EECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEecc
Q 047635          282 VIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGG  359 (388)
Q Consensus       282 ~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~  359 (388)
                      +||++|.|+++|+|+...    ..+++||+++.||.++++ .+++||++|+||++++|..++  .+++ ++|.-+-+.+.
T Consensus        51 ~Ig~~~~Ig~~~~I~~~~----~~~siIg~~~~Ig~~a~i-~g~vIG~~v~IG~ga~V~~g~~IG~~s-~Vgags~V~~~  124 (196)
T PRK13627         51 IVQAGANLQDGCIMHGYC----DTDTIVGENGHIGHGAIL-HGCVIGRDALVGMNSVIMDGAVIGEES-IVAAMSFVKAG  124 (196)
T ss_pred             EECCCCEECCCCEEeCCC----CCCCEECCCCEECCCcEE-eeEEECCCCEECcCCccCCCcEECCCC-EEcCCCEEeCC
Confidence            566677777777775432    225899999999999976 578899999999999998763  5554 44555666654


Q ss_pred             C--CCCccccCCCCccccc
Q 047635          360 K--ENPFMLDKIPSFTMDH  376 (388)
Q Consensus       360 ~--~~~~~~~~~p~~~~~~  376 (388)
                      .  .......+.|++.++.
T Consensus       125 ~~ip~~~~~~G~Pa~~~~~  143 (196)
T PRK13627        125 FQGEKRQLLMGTPARAVRS  143 (196)
T ss_pred             cCcCCCcEEEecCCEEecc
Confidence            4  2344447888866554

>cd05636 LbH_G1P_TT_C_like Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains

Probab=99.04  E-value=1.5e-09  Score=97.13  Aligned_cols=19  Identities=32%  Similarity=0.433  Sum_probs=12.0

Q ss_pred             CcEECCCCEECCCCEECCC
Q 047635          324 NIKIGDGAKIGAGSVVLKD  342 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~d  342 (388)
                      ++.||++++||.+++|..+
T Consensus       129 ~~iIg~~~~ig~~~~i~~g  147 (163)
T cd05636         129 GAIIGDGVKTGINVSLNPG  147 (163)
T ss_pred             CcEEcCCeEECCCcEECCC
Confidence            4666666666666666654

Members in this family are predicted to be glucose-1-phosphate thymidylyltransferases, which are involved in the dTDP-L-rhamnose biosynthetic pathway. Glucose-1-phosphate thymidylyltransferase catalyzes the synthesis of deoxy-thymidine di-phosphate (dTDP)-L-rhamnose, an important component of the cell wall of many microorganisms. The C-terminal LbH domain contains multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.

>cd04745 LbH_paaY_like paaY-like: This group is composed by uncharacterized proteins with similarity to the protein product of the E

Probab=99.04  E-value=2.5e-09  Score=95.25  Aligned_cols=113  Identities=17%  Similarity=0.240  Sum_probs=72.8

Q ss_pred             ecCCcEECCceEEcCCCCcEECC---CcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEE
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGE---TAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI  333 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~---~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~I  333 (388)
                      |..++.||+++.|+.  +++|..   .+.||++|.|+++|+|..    ....+++||++|+||.++.+. ++.||++|+|
T Consensus        15 i~g~v~IG~~~~I~~--~~~i~~~~~~i~IG~~~~Ig~~~~I~~----~~~~~~~Ig~~~~Ig~~~~i~-~~~Ig~~~~I   87 (155)
T cd04745          15 LIGDVIIGKNCYIGP--HASLRGDFGRIVIRDGANVQDNCVIHG----FPGQDTVLEENGHIGHGAILH-GCTIGRNALV   87 (155)
T ss_pred             EEccEEECCCCEECC--CcEEeCCCCcEEECCCCEECCCCEEee----cCCCCeEEcCCCEECCCcEEE-CCEECCCCEE
Confidence            333444555555544  444433   256666777777776632    112358999999999999764 6999999999


Q ss_pred             CCCCEECCC--CCCCcEEEecCcEEec--cCCCCccccCCCCcccccc
Q 047635          334 GAGSVVLKD--VPPRTTAVGNPARLIG--GKENPFMLDKIPSFTMDHT  377 (388)
Q Consensus       334 GagsVV~~d--Vp~~s~VvG~PArvi~--~~~~~~~~~~~p~~~~~~~  377 (388)
                      |++++|..+  +.++++ +|.-+.+.+  .........+.|++.++..
T Consensus        88 g~~~~I~~g~~Ig~~~~-Ig~~s~v~~~~~i~~~~~v~G~Pa~~~~~~  134 (155)
T cd04745          88 GMNAVVMDGAVIGEESI-VGAMAFVKAGTVIPPRSLIAGSPAKVIREL  134 (155)
T ss_pred             CCCCEEeCCCEECCCCE-ECCCCEeCCCCEeCCCCEEecCCceEeccC
Confidence            999999876  366554 455555544  2333444468898877653

coli paaY gene, which is part of the paa gene cluster responsible for phenylacetic acid degradation. Proteins in this group are expected to adopt the left-handed parallel beta-helix (LbH) structure. They contain imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Similarity to gamma carbonic anhydrase and Ferripyochelin Binding Protein (FBP) may suggest metal binding capacity.

>cd00710 LbH_gamma_CA Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site

Probab=99.04  E-value=2.1e-09  Score=97.08  Aligned_cols=52  Identities=29%  Similarity=0.356  Sum_probs=42.1

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEe
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI  357 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi  357 (388)
                      .+.||++++|++++.|.++++||++|+||++++|...+-....++|..+.+.
T Consensus        64 ~v~Ig~~~~I~~~~~i~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~Ig~~s~i~  115 (167)
T cd00710          64 SVWIGKNVSIAHGAIVHGPAYIGDNCFIGFRSVVFNAKVGDNCVIGHNAVVD  115 (167)
T ss_pred             CEEECCCceECCCCEEeCCEEECCCCEECCCCEEECCEECCCCEEcCCCEEe
Confidence            5789999999999999999999999999999999765433334556666664

They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three distinct groups of carbonic anhydrases - alpha, beta and gamma - which show no significant sequence identity or structural similarity. Gamma CAs are homotrimeric enzymes, with each subunit containing a left-handed parallel beta helix (LbH) structural domain.

>TIGR03536 DapD_gpp 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase

Probab=99.03  E-value=6.2e-10  Score=109.36  Aligned_cols=35  Identities=31%  Similarity=0.568  Sum_probs=33.1

Q ss_pred             CEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC
Q 047635          307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV  343 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV  343 (388)
                      +.||++|+||+||+|  ++.||++|+||+|++|..+.
T Consensus       251 V~IGe~~lIGagA~I--GI~IGd~~iIGAGavVtagT  285 (341)
T TIGR03536       251 ISVGEGCLLGANAGI--GIPLGDRCTVEAGLYITAGT  285 (341)
T ss_pred             EEECCCcEECCCCEE--eeEECCCCEECCCCEEeCCc
Confidence            899999999999999  99999999999999998763

2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (DapD) is involved in the succinylated branch of the "lysine biosynthesis via diaminopimelate (DAP)" pathway (GenProp0125). This model represents a clade of DapD sequences most closely related to the actinobacterial DapD family represented by the TIGR03535 model. All of the genes evaluated for the seed of this model are found in genomes where the downstream desuccinylase is present, but known DapD genes are absent. Additionally, many of the genes identified by this model are found proximal to genes involved in this lysine biosynthesis pathway.

>PRK09677 putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ; Provisional

Probab=99.02  E-value=2.5e-09  Score=98.88  Aligned_cols=114  Identities=21%  Similarity=0.270  Sum_probs=72.9

Q ss_pred             eeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEEC----------
Q 047635          253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCIL----------  322 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Il----------  322 (388)
                      ..+.+|+++.++.++.++.    .......||++|.|++++.|...      ..++||++|.||.++.|.          
T Consensus        42 ~~I~iG~~v~i~~~~ri~~----~~~~~i~IG~~v~Ig~~v~I~~~------~~v~IG~~v~Ig~~v~I~~~~hg~~~~~  111 (192)
T PRK09677         42 GSINFGEGFTSGVGLRLDA----FGRGKLFFGDNVQVNDYVHIACI------ESITIGRDTLIASKVFITDHNHGSFKHS  111 (192)
T ss_pred             CeEEECCceEECCCeEEEe----cCCCeEEECCCCEECCCcEEccC------ceEEECCCCEECCCeEEECCCCcccccc
Confidence            3455666666666666532    11223455555555555555421      135677777777766664          


Q ss_pred             -----------------CCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcccccc
Q 047635          323 -----------------GNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHT  377 (388)
Q Consensus       323 -----------------g~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~~  377 (388)
                                       ++++||++|+||++++|..++  .++ .++|.-+.+.+.........+.|++.++.-
T Consensus       112 ~~~~~~~~~~~~~~~~~~~v~Ig~~~~ig~~~~i~~g~~Ig~~-~~Iga~s~v~~~i~~~~~~~G~Pa~~ik~~  184 (192)
T PRK09677        112 DDFSSPNLPPDMRTLESSAVVIGQRVWIGENVTILPGVSIGNG-CIVGANSVVTKSIPENTVIAGNPAKIIKKY  184 (192)
T ss_pred             ccccccccChhhcccccCCeEEcCCcEECCCCEEcCCCEECCC-CEECCCCEECcccCCCcEEEecCCEEEecc
Confidence                             347899999999999998874  444 456667888777777777789999776654

>cd05636 LbH_G1P_TT_C_like Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains

Probab=99.02  E-value=3.7e-09  Score=94.63  Aligned_cols=85  Identities=25%  Similarity=0.396  Sum_probs=44.1

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCC---CCCEECCCcEEccCCEECCCcEECCC
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGD---RHPKIGNGVLVGAGTCILGNIKIGDG  330 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~---~~~~IGd~V~IGaga~Ilg~V~IGd~  330 (388)
                      .+.||+++.|++++.|.+  .++||+++.|++++.|..++.|+.++.+...   .+++||+++.|+.++.+ +++.||++
T Consensus        17 ~v~ig~~~~I~~~a~i~~--~v~Ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~siig~~~~I~~~~~i-~~siIg~~   93 (163)
T cd05636          17 PVWIGEGAIVRSGAYIEG--PVIIGKGCEIGPNAYIRGYTVLGDGCVVGNSVEVKNSIIMDGTKVPHLNYV-GDSVLGEN   93 (163)
T ss_pred             CeEEcCCCEECCCCEEeC--CeEECCCCEECCCCEEcCCCEECCCCEECCCcEEeeeEecCCCEeccCCEE-ecCEECCC
Confidence            345555555555555544  4455555544444444433333333222211   13466666666666654 45667777


Q ss_pred             CEECCCCEECC
Q 047635          331 AKIGAGSVVLK  341 (388)
Q Consensus       331 v~IGagsVV~~  341 (388)
                      +.|++++++..
T Consensus        94 ~~I~~~~~i~~  104 (163)
T cd05636          94 VNLGAGTITAN  104 (163)
T ss_pred             CEECCCcEEcc
Confidence            77777776643

Members in this family are predicted to be glucose-1-phosphate thymidylyltransferases, which are involved in the dTDP-L-rhamnose biosynthetic pathway. Glucose-1-phosphate thymidylyltransferase catalyzes the synthesis of deoxy-thymidine di-phosphate (dTDP)-L-rhamnose, an important component of the cell wall of many microorganisms. The C-terminal LbH domain contains multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.

>TIGR03308 phn_thr-fam phosphonate metabolim protein, transferase hexapeptide repeat family

Probab=99.01  E-value=2.5e-09  Score=99.97  Aligned_cols=114  Identities=18%  Similarity=0.205  Sum_probs=75.6

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEEC------------
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCIL------------  322 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Il------------  322 (388)
                      +.|++++.|. ++.|+.  +++||++++|. ++.||.++.|+.++.+.   +++||++|.|+.++.|.            
T Consensus         9 ~~I~~~a~i~-~~~IG~--~~~Ig~~a~I~-~s~IG~~s~I~~~~~i~---~~~IG~~~~I~~~v~I~~~~h~~~~~s~~   81 (204)
T TIGR03308         9 PTLHPTAELT-ESKLGR--YTEIGERTRLR-EVALGDYSYVMRDCDII---YTTIGKFCSIAAMVRINATNHPMERPTLH   81 (204)
T ss_pred             CeECCCcEEe-ccEeCC--CcEECCCcEEe-CCEECCCCEECCCcEEe---eeEECCCCEECCCCEECCCCCCCCccccc
Confidence            3455555553 244443  44444444433 33444444444433332   46888888888888774            


Q ss_pred             -------------------------CCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcccc
Q 047635          323 -------------------------GNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMD  375 (388)
Q Consensus       323 -------------------------g~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~  375 (388)
                                               .++.||++|+||.+++|..++  .++ .++|..+.+.+.........+.|+..++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~I~~gv~Ig~~-~~I~~gs~v~~~i~~~~~~~G~Pa~~~~  160 (204)
T TIGR03308        82 HFTYRAAMYFDDASDDADFFAWRRAKRVTIGHDVWIGHGAVILPGVTIGNG-AVIAAGAVVTKDVAPYTIVAGVPAKLIR  160 (204)
T ss_pred             ccccccccccccccccccccccccCCCeEECCCCEECCCCEECCCCEECCC-CEECCCCEECCCCCCCcEEEecCchHhh
Confidence                                     488899999999999999885  454 5667778888888877777899998776


Q ss_pred             c
Q 047635          376 H  376 (388)
Q Consensus       376 ~  376 (388)
                      +
T Consensus       161 ~  161 (204)
T TIGR03308       161 R  161 (204)
T ss_pred             h
Confidence            4

This family of proteins contains copies of the Bacterial transferase hexapeptide repeat family (pfam00132) and is only found in operons encoding the phosphonate C-P lyase system (GenProp0232). Many C-P lyase operons, however, lack a homolog of this protein.

>cd04646 LbH_Dynactin_6 Dynactin 6 (or subunit p27): Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport

Probab=99.01  E-value=3.5e-09  Score=95.57  Aligned_cols=118  Identities=19%  Similarity=0.224  Sum_probs=79.2

Q ss_pred             eeEecCCcEECCceEEcCCCCcEEC---CCcEECCCcEEcCCCEECCCCcc--CCCCCCEECCCcEEccCCEECCCcEEC
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVG---ETAVIGDNVSILHNVTLGGTGKM--SGDRHPKIGNGVLVGAGTCILGNIKIG  328 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG---~~~~IGdnV~Ig~gvtIgg~~~i--~g~~~~~IGd~V~IGaga~Ilg~V~IG  328 (388)
                      +..|.+++.||+++.|.+  +++|.   ..++||++|.|+++|+|......  .....+.||+++.|+.++.|.+ ++||
T Consensus        11 ~a~i~g~v~IG~~~~I~~--~a~I~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~v~IG~~~~i~~~~~i~~-~~IG   87 (164)
T cd04646          11 ESEIRGDVTIGPGTVVHP--RATIIAEAGPIIIGENNIIEEQVTIVNKKPKDPAEPKPMIIGSNNVFEVGCKCEA-LKIG   87 (164)
T ss_pred             CCEEcCceEECCCCEEcC--CeEEecCCCCeEECCCCEECCCcEEecCCCCCCCCCCCeEECCCCEECCCcEEEe-eEEC
Confidence            344555666777777766  66663   34688888888888888753221  1123478999999999999875 9999


Q ss_pred             CCCEECCCCEECCCC--CCCcEEEecCcEEecc--CCCCccccCCCCcccc
Q 047635          329 DGAKIGAGSVVLKDV--PPRTTAVGNPARLIGG--KENPFMLDKIPSFTMD  375 (388)
Q Consensus       329 d~v~IGagsVV~~dV--p~~s~VvG~PArvi~~--~~~~~~~~~~p~~~~~  375 (388)
                      ++|+||++++|..++  .+++ ++|.-+.+.+.  .+......+.|+..+.
T Consensus        88 d~~~Ig~~a~I~~gv~Ig~~~-~IgagsvV~~~~~i~~~~vi~g~~~~~~~  137 (164)
T cd04646          88 NNNVFESKSFVGKNVIITDGC-IIGAGCKLPSSEILPENTVIYGADCLRRT  137 (164)
T ss_pred             CCCEEeCCCEECCCCEECCCC-EEeCCeEECCCcEECCCeEEeCCceEEEe
Confidence            999999999998874  4444 45555665553  3344444566765543

Dynactin is a heterocomplex of at least eight subunits, including a 150,000-MW protein called Glued, the actin-capping protein Arp1, and dynamatin. In vitro binding experiments show that dynactin enhances dynein-dependent motility, possibly through interaction with microtubules and vesicles. Subunit p27 is part of the pointed-end subcomplex in dynactin that also includes p25, p26, and Arp11. This subcomplex interacts with membranous cargoes. p25 and p27 contain the imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), indicating a left-handed parallel beta helix (LbH) structural domain. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.

>PLN02296 carbonate dehydratase

Probab=98.99  E-value=4.6e-09  Score=102.21  Aligned_cols=113  Identities=19%  Similarity=0.236  Sum_probs=73.3

Q ss_pred             CcEECCceEEcCCCCcEECCC---cEECCCcEEcCCCEECCCCc-cC-CCCCCEECCCcEEccCCEECCCcEECCCCEEC
Q 047635          260 GAKIGRGLLFDHATGVVVGET---AVIGDNVSILHNVTLGGTGK-MS-GDRHPKIGNGVLVGAGTCILGNIKIGDGAKIG  334 (388)
Q Consensus       260 ~a~IG~gv~I~~gtgVvIG~~---~~IGdnV~Ig~gvtIgg~~~-i~-g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IG  334 (388)
                      .+.||+++.|..  +++|...   ++||++|.|+++|+|..... .. ...+++||++|+||.||+| .+++||++|+||
T Consensus        70 ~V~IG~~~~I~~--gavI~g~~~~I~IG~~~~I~d~~vI~~~~~~~~g~~~~siIG~~v~IG~~avI-~g~~Igd~v~IG  146 (269)
T PLN02296         70 DVQVGRGSSIWY--GCVLRGDVNSISVGSGTNIQDNSLVHVAKTNLSGKVLPTIIGDNVTIGHSAVL-HGCTVEDEAFVG  146 (269)
T ss_pred             ceEECCCCEECC--CCEEEcCCCceEECCCCEECCCCEEEeCCCcccCCCCCcEeCCCCEECCCcee-cCCEECCCcEEC
Confidence            344555555554  4455443   36777777777777753211 11 1236899999999999987 569999999999


Q ss_pred             CCCEECCCC--CCCcEEEecCcEEecc--CCCCccccCCCCccccc
Q 047635          335 AGSVVLKDV--PPRTTAVGNPARLIGG--KENPFMLDKIPSFTMDH  376 (388)
Q Consensus       335 agsVV~~dV--p~~s~VvG~PArvi~~--~~~~~~~~~~p~~~~~~  376 (388)
                      .|++|..++  .+++++ |.-+.+.+.  ........+.|++.++.
T Consensus       147 ~ga~I~~gv~Ig~~a~I-gagSvV~~~~~I~~~~~~~G~PA~~ir~  191 (269)
T PLN02296        147 MGATLLDGVVVEKHAMV-AAGALVRQNTRIPSGEVWAGNPAKFLRK  191 (269)
T ss_pred             CCcEECCCeEECCCCEE-CCCCEEecCCEeCCCeEEeccCcEEeCC
Confidence            999999874  666544 444555544  23344446788866544

>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=98.99  E-value=4.3e-09  Score=108.15  Aligned_cols=66  Identities=23%  Similarity=0.262  Sum_probs=51.2

Q ss_pred             CCEECCCcEEccCCEE-------CCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCc
Q 047635          306 HPKIGNGVLVGAGTCI-------LGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSF  372 (388)
Q Consensus       306 ~~~IGd~V~IGaga~I-------lg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~  372 (388)
                      +++||++|.||+++++       ..+++||++|+||+|++|..++  .+++++ |..+.+.+.........+.|..
T Consensus       355 ~~~ig~~~~Ig~~~~~~~~~~~~~~~~~Ig~~~~ig~~~~i~~~~~Ig~~~~i-g~~s~v~~~v~~~~~~~g~~~~  429 (446)
T PRK14353        355 DATIGAGANIGAGTITCNYDGFNKHRTEIGAGAFIGSNSALVAPVTIGDGAYI-ASGSVITEDVPDDALALGRARQ  429 (446)
T ss_pred             CcEEcCCcEECCceeeeccccccCCCcEECCCcEECCCCEEeCCCEECCCCEE-CCCCEECccCCCCCEEEecCce
Confidence            3578888899998877       3379999999999999999875  676655 8888888877666655565543

>PLN02472 uncharacterized protein

Probab=98.98  E-value=4.2e-09  Score=101.27  Aligned_cols=119  Identities=13%  Similarity=0.081  Sum_probs=75.7

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCC---cEECCCcEEcCCCEECCCCcc--CCCCCCEECCCcEEccCCEECCCcEEC
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGET---AVIGDNVSILHNVTLGGTGKM--SGDRHPKIGNGVLVGAGTCILGNIKIG  328 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~---~~IGdnV~Ig~gvtIgg~~~i--~g~~~~~IGd~V~IGaga~Ilg~V~IG  328 (388)
                      +..+..+++||+++.|+.  +++|..+   .+||+++.|+++|+|......  .-..+++||++|.||.+++| .+++||
T Consensus        71 ~a~i~G~V~Ig~~a~I~~--gavirgd~~~I~IG~~t~Ig~~~vI~~~~~~~~~i~~~tvIG~~v~IG~~s~L-~~~~Ig  147 (246)
T PLN02472         71 NVVLAGQVTVWDGASVWN--GAVLRGDLNKITVGFCSNVQERCVLHAAWNSPTGLPAETLIDRYVTIGAYSLL-RSCTIE  147 (246)
T ss_pred             CCEEecCEEECCCCEEcC--CCEEecCCcceEECCCCEECCCCEEeecCccccCCCCCcEECCCCEECCCcEE-CCeEEc
Confidence            444444566666666665  4444333   678888888888888643211  11136899999999999988 489999


Q ss_pred             CCCEECCCCEECCCC--CCCcEEEecCcEEe--ccCCCCccccCCCCccccc
Q 047635          329 DGAKIGAGSVVLKDV--PPRTTAVGNPARLI--GGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       329 d~v~IGagsVV~~dV--p~~s~VvG~PArvi--~~~~~~~~~~~~p~~~~~~  376 (388)
                      ++|.||.+++|..+.  ..++++ |.-+.+-  .....+....+.|++.++.
T Consensus       148 d~v~IG~~svI~~gavIg~~~~I-g~gsvV~~g~~Ip~g~~~~G~PA~~~~~  198 (246)
T PLN02472        148 PECIIGQHSILMEGSLVETHSIL-EAGSVLPPGRRIPTGELWAGNPARFVRT  198 (246)
T ss_pred             CCCEECCCCEECCCCEECCCCEE-CCCCEECCCCEeCCCCEEEecCCEEecc
Confidence            999999999998763  555433 3333333  1223334446888876543

>TIGR02287 PaaY phenylacetic acid degradation protein PaaY

Probab=98.97  E-value=4.4e-09  Score=97.59  Aligned_cols=90  Identities=18%  Similarity=0.314  Sum_probs=58.1

Q ss_pred             cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC--CCCCcEEEecCcEEec
Q 047635          281 AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIG  358 (388)
Q Consensus       281 ~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~  358 (388)
                      ++||++|.|+++|+|.+.    ...+++||+++.||.+++| .+++||++|+||.+++|..+  |.++++ +|..+.+..
T Consensus        48 i~Ig~~t~Ig~~~~I~~~----~~~~siIg~~~~Ig~~a~I-~~siIg~~~~IG~ga~I~~g~~IG~~s~-Vgags~V~~  121 (192)
T TIGR02287        48 IVLKEGANIQDNCVMHGF----PGQDTVVEENGHVGHGAIL-HGCIVGRNALVGMNAVVMDGAVIGENSI-VAASAFVKA  121 (192)
T ss_pred             eEECCCCEECCCeEEecc----CCCCCeECCCCEECCCCEE-cCCEECCCCEECCCcccCCCeEECCCCE-EcCCCEECC
Confidence            344555666666655321    1236899999999999976 46999999999999988775  355543 344454443


Q ss_pred             c--CCCCccccCCCCccccc
Q 047635          359 G--KENPFMLDKIPSFTMDH  376 (388)
Q Consensus       359 ~--~~~~~~~~~~p~~~~~~  376 (388)
                      .  ........+.|++.++.
T Consensus       122 ~~~ip~~~l~~G~Pak~i~~  141 (192)
T TIGR02287       122 GAEMPAQYLVVGSPAKVIRE  141 (192)
T ss_pred             CCEECCCeEEEccCCEEecc
Confidence            2  22333446778876654

Members of this family are located next to other genes organized into apparent operons for phenylacetic acid degradation. PaaY is located near the end of these gene clusters and often next to PaaX, a transcriptional regulator.

>PRK11830 dapD 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional

Probab=98.97  E-value=3.5e-09  Score=103.07  Aligned_cols=81  Identities=30%  Similarity=0.401  Sum_probs=63.6

Q ss_pred             eeeeEecCCcEECCceEEcCCCCcEE-----CCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECC---
Q 047635          252 VFSVDIHPGAKIGRGLLFDHATGVVV-----GETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILG---  323 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gtgVvI-----G~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg---  323 (388)
                      ..++.|.+++.|+.+++|+.  +++|     +.++.||++|+|+.+++||.        .+.||++|.|++++.|.+   
T Consensus       101 ~~~~rI~p~a~V~~ga~Ig~--gavI~p~~V~iGa~Ig~gt~I~~~a~IG~--------~a~IG~nv~I~~gv~I~g~~~  170 (272)
T PRK11830        101 EAGVRVVPGAVVRRGAYIAP--NVVLMPSYVNIGAYVDEGTMVDTWATVGS--------CAQIGKNVHLSGGVGIGGVLE  170 (272)
T ss_pred             cCCcEEcCCeEECCCCEECC--CcEEEEEEECCCCEECCCcEEccccEECC--------CCEECCCcEECCCccCCCCcc
Confidence            45788999999999999988  4444     44567777777777777765        578999999999988765   


Q ss_pred             -----CcEECCCCEECCCCEECCC
Q 047635          324 -----NIKIGDGAKIGAGSVVLKD  342 (388)
Q Consensus       324 -----~V~IGd~v~IGagsVV~~d  342 (388)
                           +++||++|+||++++|..+
T Consensus       171 ~~~~~~viIgDnv~IGa~s~I~~G  194 (272)
T PRK11830        171 PLQANPVIIEDNCFIGARSEVVEG  194 (272)
T ss_pred             ccCcCCeEEcCCCEECCCCEEcCC
Confidence                 5888888888888888655

>COG0663 PaaY Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]

Probab=98.94  E-value=4.9e-09  Score=95.45  Aligned_cols=109  Identities=27%  Similarity=0.396  Sum_probs=75.1

Q ss_pred             CcEECCceEEcCCCCcEECCC---cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCC
Q 047635          260 GAKIGRGLLFDHATGVVVGET---AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAG  336 (388)
Q Consensus       260 ~a~IG~gv~I~~gtgVvIG~~---~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGag  336 (388)
                      .++||+++.|++  +++|..+   ..||+++.|-+||.|.....    ..++||++|.||.+|.|-+ |+||++|.||.|
T Consensus        29 dV~Ig~~vsIw~--~aVlRgD~~~I~IG~~tNIQDg~ViH~~~~----~p~~IG~~vtIGH~aivHG-c~Ig~~~lIGmg  101 (176)
T COG0663          29 DVRIGAGVSIWP--GAVLRGDVEPIRIGARTNIQDGVVIHADPG----YPVTIGDDVTIGHGAVVHG-CTIGDNVLIGMG  101 (176)
T ss_pred             eEEECCCCEECC--ceEEEccCCceEECCCceecCCeEEecCCC----CCeEECCCcEEcCccEEEE-eEECCCcEEecC
Confidence            345666666666  5555544   36666666666666654221    4689999999999999987 999999999999


Q ss_pred             CEECCC--CCCCcEEEecCcEEeccC--CCCccccCCCCccccc
Q 047635          337 SVVLKD--VPPRTTAVGNPARLIGGK--ENPFMLDKIPSFTMDH  376 (388)
Q Consensus       337 sVV~~d--Vp~~s~VvG~PArvi~~~--~~~~~~~~~p~~~~~~  376 (388)
                      |+|..+  |..++ ++|..|-+...+  +......+.|++.+++
T Consensus       102 A~vldga~IG~~~-iVgAgalV~~~k~~p~~~L~~G~Pak~~r~  144 (176)
T COG0663         102 ATVLDGAVIGDGS-IVGAGALVTPGKEIPGGSLVVGSPAKVVRP  144 (176)
T ss_pred             ceEeCCcEECCCc-EEccCCcccCCcCCCCCeEeecCcceeeec
Confidence            999985  56665 445556665432  2222336788876654

>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=98.92  E-value=9.4e-09  Score=107.18  Aligned_cols=70  Identities=14%  Similarity=0.232  Sum_probs=53.6

Q ss_pred             CCEECCCcEEccCCEEC-------CCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccc-cCCCCcccc
Q 047635          306 HPKIGNGVLVGAGTCIL-------GNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFML-DKIPSFTMD  375 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Il-------g~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~-~~~p~~~~~  375 (388)
                      +++||++|.||+|+++.       .+++||++|+||.+++|..++  .++ .++|..+.+.+....+... .+.|+..+.
T Consensus       374 ~~~Ig~~~~IG~~~~i~~~~~~~~~~~~IGd~~~iG~~~~i~~~~~Ig~~-~~igags~v~~~v~~~~~~~~~~p~~~~~  452 (482)
T PRK14352        374 DADIGEHSNIGASSVFVNYDGVNKHRTTIGSHVRTGSDTMFVAPVTVGDG-AYTGAGTVIREDVPPGALAVSEGPQRNIE  452 (482)
T ss_pred             ccEECCCcEECCCcEEeccccccCCCCeECCCcEECCCCEEeCCCEECCC-cEECCCCEEcCCCCCCcEEEecccccccc
Confidence            46889999999999885       359999999999999999885  444 5677777787776655543 467877765


Q ss_pred             c
Q 047635          376 H  376 (388)
Q Consensus       376 ~  376 (388)
                      +
T Consensus       453 ~  453 (482)
T PRK14352        453 G  453 (482)
T ss_pred             c
Confidence            4

>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=98.91  E-value=6.8e-09  Score=106.72  Aligned_cols=68  Identities=22%  Similarity=0.293  Sum_probs=53.6

Q ss_pred             CCEECCCcEEccCCEECC-------CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccc
Q 047635          306 HPKIGNGVLVGAGTCILG-------NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTM  374 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg-------~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~  374 (388)
                      ++.||++|.||+++.+..       +++||++|+||++++|..++  .++ .++|..+.+.+.......+.+.|....
T Consensus       365 ~~~i~~~~~iG~~~~~~~~~~~~~~~~~Ig~~~~iG~~~~i~~~~~ig~~-~~v~~~~~v~~~~~~~~~~~g~~~~~~  441 (450)
T PRK14360        365 DATLGEQVNIGAGTITANYDGVKKHRTVIGDRSKTGANSVLVAPITLGED-VTVAAGSTITKDVPDNSLAIARSRQVI  441 (450)
T ss_pred             CceecCCcEECccceeccccccccCCcEeCCCeEeCCCCEEeCCcEECCC-CEECCCCEECccCCCCCEEEeccceee
Confidence            467899999999988743       79999999999999999875  554 566777888888777776677775543

>KOG1461 consensus Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6) [Translation, ribosomal structure and biogenesis]

Probab=98.91  E-value=1.7e-09  Score=113.56  Aligned_cols=126  Identities=27%  Similarity=0.385  Sum_probs=74.0

Q ss_pred             cceeeeccchhHHHHHHHHHHHHHHhcchH-------HHH-----HHHh------ccceeeeeEecCCcEECCceEEcCC
Q 047635          211 YAHCLLNFKGFLACQAHRIAHRLWLQGRKV-------LAL-----LIQN------RVSEVFSVDIHPGAKIGRGLLFDHA  272 (388)
Q Consensus       211 ~~~~ll~~~gf~al~~~Ria~~l~~~g~~~-------la~-----~i~~------~~~~~~gV~Ig~~a~IG~gv~I~~g  272 (388)
                      |...+-.|..|.......+.+|.++.-...       +..     +-..      .+...-.+.||.++.||.|+.|.  
T Consensus       272 yA~rv~n~~syd~vSkDiI~RW~YP~Vpd~~~~~~q~~~~~r~~IYk~~dv~~~~~~~v~~~~~ig~gT~Ig~g~~I~--  349 (673)
T KOG1461|consen  272 YAARVENLRSYDLVSKDIIQRWTYPLVPDINFSGNQTFSLERRNIYKSPDVVLSHSVIVGANVVIGAGTKIGSGSKIS--  349 (673)
T ss_pred             hhhhhcccHHHHHHHHHHHHhhcccccccccCCCCceeeecccccccCccceehhhccccceEEecccccccCCCeee--
Confidence            444556677777777778888877753211       000     0000      11111223344444444444443  


Q ss_pred             CCcEECCCcEECCCcE-----EcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC
Q 047635          273 TGVVVGETAVIGDNVS-----ILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD  342 (388)
Q Consensus       273 tgVvIG~~~~IGdnV~-----Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d  342 (388)
                       +.+||.+|.||.||.     |++||+||+++.+.   ++.|||+|.|++||++.++++||.+++||.+-++.++
T Consensus       350 -NSVIG~~c~IgsN~~I~~S~iw~~v~Igdnc~I~---~aii~d~v~i~~~~~l~~g~vl~~~VVv~~~~~l~~n  420 (673)
T KOG1461|consen  350 -NSVIGANCRIGSNVRIKNSFIWNNVTIGDNCRID---HAIICDDVKIGEGAILKPGSVLGFGVVVGRNFVLPKN  420 (673)
T ss_pred             -cceecCCCEecCceEEeeeeeecCcEECCCceEe---eeEeecCcEeCCCcccCCCcEEeeeeEeCCCcccccc
Confidence             567888888888775     47777777776665   5677777777777777777777776666666555443

>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase

Probab=98.91  E-value=8.4e-09  Score=105.74  Aligned_cols=65  Identities=22%  Similarity=0.286  Sum_probs=45.1

Q ss_pred             CEECCCcEEccCCEECC-------CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCc
Q 047635          307 PKIGNGVLVGAGTCILG-------NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSF  372 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg-------~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~  372 (388)
                      +.||++|.||+++++..       +++||++|+||.+++|..++  .+++ ++|..+.+.+..+......+.|..
T Consensus       366 ~~Ig~~~~ig~~~~~~~~~~~~~~~~~Igd~~~ig~~~~i~~~~~ig~~~-~i~~g~~v~~~v~~~~~~~~~~~~  439 (451)
T TIGR01173       366 AEIGSNVNIGAGTITCNYDGANKHKTIIGDGVFIGSNTQLVAPVKVGDGA-TIAAGSTVTKDVPEGALAISRARQ  439 (451)
T ss_pred             eEEcCCcEECCCeEEeCcccccCCCCEECCCcEECCCCEEECCcEECCCC-EEccCCEECccCCCCcEEEccCce
Confidence            56777777777777653       58899999999999888774  5554 445567777766665555555543

This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.

>cd04650 LbH_FBP Ferripyochelin Binding Protein (FBP): FBP is an outer membrane protein which plays a role in iron acquisition

Probab=98.89  E-value=1.7e-08  Score=90.20  Aligned_cols=113  Identities=17%  Similarity=0.202  Sum_probs=72.0

Q ss_pred             EecCCcEECCceEEcCCCCcEECCC---cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCE
Q 047635          256 DIHPGAKIGRGLLFDHATGVVVGET---AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAK  332 (388)
Q Consensus       256 ~Ig~~a~IG~gv~I~~gtgVvIG~~---~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~  332 (388)
                      .|.+.+.||+++.|.+  +++|...   ++||++|.|+++|.|....    ..+++||+++.|+.++.+ .++.||++|+
T Consensus        14 ~i~~~v~iG~~~~I~~--~a~I~~~~~~i~Ig~~~~Ig~~~~I~~~~----~~~~~Ig~~~~I~~~~~i-~~~~Ig~~~~   86 (154)
T cd04650          14 YVIGDVVIGELTSVWH--YAVIRGDNDSIYIGKYSNVQENVSIHTDH----GYPTEIGDYVTIGHNAVV-HGAKVGNYVI   86 (154)
T ss_pred             EEEeeEEECCCCEEcC--CeEEEcCCCcEEECCCCEECCCCEEEeCC----CCCeEECCCCEECCCcEE-ECcEECCCCE
Confidence            3444455555555555  5555543   4777777777777775421    125899999999999988 5789999999


Q ss_pred             ECCCCEECCCC--CCCcEEEecCcEEec--cCCCCccccCCCCccccc
Q 047635          333 IGAGSVVLKDV--PPRTTAVGNPARLIG--GKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       333 IGagsVV~~dV--p~~s~VvG~PArvi~--~~~~~~~~~~~p~~~~~~  376 (388)
                      ||+++++..++  .+++++. .-+.+..  +........+.|+..++.
T Consensus        87 Ig~~~~i~~~~~Ig~~~~vg-~~~~v~~g~~i~~~~v~~G~pa~~~~~  133 (154)
T cd04650          87 VGMGAILLNGAKIGDHVIIG-AGAVVTPGKEIPDYSLVLGVPAKVVRK  133 (154)
T ss_pred             EcCCCEEeCCCEECCCCEEC-CCCEECCCcEeCCCCEEeccCceEecc
Confidence            99999997663  5554443 3333332  222333336777766544

It binds iron when it is complexed with pyochelin. It adopts the left-handed parallel beta-helix (LbH) structure, and contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Acyltransferase activity has not been observed in this group.

>PRK10191 putative acyl transferase; Provisional

Probab=98.86  E-value=1.3e-08  Score=90.64  Aligned_cols=74  Identities=31%  Similarity=0.556  Sum_probs=53.4

Q ss_pred             eeeEecCCcEECCceEEcCCCCcEECCC-------cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCc
Q 047635          253 FSVDIHPGAKIGRGLLFDHATGVVVGET-------AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNI  325 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gtgVvIG~~-------~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V  325 (388)
                      .++.|+++++||+++.|+|  +++||+.       ++||++|.|+.++++.+        +++||++++||+|++|.+++
T Consensus        60 ~~i~I~~~~~IGd~~~I~h--~v~IG~~~~~~~~~~~IGd~~~Ig~~~~I~~--------~v~IG~~~~Igags~V~~dv  129 (146)
T PRK10191         60 YAVVINKNVVAGDDFTIRH--GVTIGNRGADNMACPHIGNGVELGANVIILG--------DITIGNNVTVGAGSVVLDSV  129 (146)
T ss_pred             CeEEECCCcEECCCCEECC--CCEECCCCcCCCCCCEECCCcEEcCCCEEeC--------CCEECCCCEECCCCEECCcc
Confidence            3677788888888888887  7777754       57777777777777765        68899999999999888764


Q ss_pred             EECCCCEECCCC
Q 047635          326 KIGDGAKIGAGS  337 (388)
Q Consensus       326 ~IGd~v~IGags  337 (388)
                      . .+...+|..+
T Consensus       130 ~-~~~~v~G~pA  140 (146)
T PRK10191        130 P-DNALVVGEKA  140 (146)
T ss_pred             C-CCcEEEccCc
Confidence            3 3334444444

>cd05787 LbH_eIF2B_epsilon eIF-2B epsilon subunit, central Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator, a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha, beta, gamma, delta and epsilon)

Probab=98.86  E-value=2.1e-08  Score=78.21  Aligned_cols=71  Identities=30%  Similarity=0.458  Sum_probs=38.9

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCC
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAG  336 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGag  336 (388)
                      ||++++|++++.|.   +.+||+++.||+++.|. ++.|+.        +++||++++|. +++|.++++||+++.|+++
T Consensus         2 ig~~~~I~~~~~i~---~s~ig~~~~ig~~~~i~-~s~i~~--------~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~~   68 (79)
T cd05787           2 IGRGTSIGEGTTIK---NSVIGRNCKIGKNVVID-NSYIWD--------DVTIEDGCTIH-HSIVADGAVIGKGCTIPPG   68 (79)
T ss_pred             ccCCCEECCCCEEe---ccEECCCCEECCCCEEe-CcEEeC--------CCEECCCCEEe-CcEEcCCCEECCCCEECCC
Confidence            57777777777775   35556655555555553 344433        34555555543 4455555555555555555


Q ss_pred             CEEC
Q 047635          337 SVVL  340 (388)
Q Consensus       337 sVV~  340 (388)
                      ++|.
T Consensus        69 ~~v~   72 (79)
T cd05787          69 SLIS   72 (79)
T ss_pred             CEEe
Confidence            5443

eIF2B is important for regenerating GTP-bound eIF2 during the initiation process. This event is obligatory for eIF2 to bind initiator methionyl-tRNA, forming the ternary initiation complex. The eIF-2B epsilon subunit contains an N-terminal domain that resembles a dinucleotide-binding Rossmann fold, a central LbH domain containing 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), and a C-terminal domain of unknown function that is present in eIF-4 gamma, eIF-5, and eIF-2B epsilon. The epsilon and gamma subunits form the catalytic subcomplex of eIF-2B, which binds eIF2 and catalyzes guanine nucleotide exchange.

>cd03359 LbH_Dynactin_5 Dynactin 5 (or subunit p25); Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport

Probab=98.85  E-value=2.2e-08  Score=89.86  Aligned_cols=81  Identities=15%  Similarity=0.219  Sum_probs=57.2

Q ss_pred             CcEECCceEEcCCCCcEECCC---cEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEE-----CCCcEE
Q 047635          260 GAKIGRGLLFDHATGVVVGET---AVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCI-----LGNIKI  327 (388)
Q Consensus       260 ~a~IG~gv~I~~gtgVvIG~~---~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~I-----lg~V~I  327 (388)
                      +..||+++.|++  +++|...   +.||++|.|+++|+|.+.......    ..++||++++|+.++++     ..++.|
T Consensus        21 ~I~ig~~~~I~~--~~~I~g~~~~v~IG~~~~I~~~~~I~~~~~~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~~Ig~~v~I   98 (161)
T cd03359          21 NIVLNGKTIIQS--DVIIRGDLATVSIGRYCILSEGCVIRPPFKKFSKGVAFFPLHIGDYVFIGENCVVNAAQIGSYVHI   98 (161)
T ss_pred             CEEECCceEEcC--CCEEeCCCcceEECCCcEECCCCEEeCCccccCCCccccCeEECCccEECCCCEEEeeEEcCCcEE
Confidence            677788888877  5566654   689999999999999865433221    35689999999999975     445556


Q ss_pred             CCCCEECCCCEECCC
Q 047635          328 GDGAKIGAGSVVLKD  342 (388)
Q Consensus       328 Gd~v~IGagsVV~~d  342 (388)
                      |++++|+.+++|..+
T Consensus        99 g~~~~Ig~~~~I~~~  113 (161)
T cd03359          99 GKNCVIGRRCIIKDC  113 (161)
T ss_pred             CCCCEEcCCCEECCC
Confidence            666666666655554

Dynactin is a heterocomplex of at least eight subunits, including a 150,000-MW protein called Glued, the actin-capping protein Arp1, and dynamatin. In vitro binding experiments show that dynactin enhances dynein-dependent motility, possibly through interaction with microtubules and vesicles. Subunit p25 is part of the pointed-end subcomplex in dynactin that also includes p26, p27, and Arp11. This subcomplex interacts with membranous cargoes. p25 and p27 contain imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), indicating a left-handed parallel beta helix (LbH) structural domain. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.

>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=98.84  E-value=1.4e-08  Score=104.53  Aligned_cols=68  Identities=22%  Similarity=0.231  Sum_probs=48.5

Q ss_pred             CCEECCCcEEccCCEEC-------CCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccc
Q 047635          306 HPKIGNGVLVGAGTCIL-------GNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTM  374 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Il-------g~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~  374 (388)
                      +++||++|.||+|+++.       .+++||++|+||++++|..++  .+++ ++|.-+.+.+.......+.+.|....
T Consensus       358 ~~~Ig~~~~ig~~~~~~~~~~~~~~~~~Igd~~~ig~~~~i~~gv~Ig~~~-~i~ag~~v~~~v~~~~~~~g~~~~~~  434 (448)
T PRK14357        358 DATVGKNVNIGAGTITCNYDGKKKNPTFIEDGAFIGSNSSLVAPVRIGKGA-LIGAGSVITEDVPPYSLALGRARQIV  434 (448)
T ss_pred             CcEECCCcEECCCcccccccccccCCcEECCCCEECCCCEEeCCcEECCCC-EEcCCCEECCcCCCCcEEEccccEEe
Confidence            35777788888877653       368899999999999998875  5554 45556777777666666666665443

>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=98.83  E-value=2.7e-08  Score=102.84  Aligned_cols=68  Identities=21%  Similarity=0.391  Sum_probs=49.4

Q ss_pred             CCEECCCcEEccCCEECC-------CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccc-cCCCCccc
Q 047635          306 HPKIGNGVLVGAGTCILG-------NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFML-DKIPSFTM  374 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg-------~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~-~~~p~~~~  374 (388)
                      ++.||++|.||+++++..       +++|||+|+||.+++|...+  .+++ ++|..+.+.+.......+ .+.|.+..
T Consensus       369 ~~~ig~~~~ig~~~~~~~~~~~~~~~~~Igd~~~ig~~~~i~~~~~ig~~~-~i~~gs~v~~~v~~~~~~~~~~~~~~~  446 (456)
T PRK09451        369 DAEIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGA-TIGAGTTVTRDVAENELVISRVPQRHI  446 (456)
T ss_pred             ccEECCCCEEcCCeEEecccCcccCCCEECCCcEECCCCEEeCCcEECCCC-EECCCCEEccccCCCCEEEeccCceec
Confidence            458888888888887742       48899999999999998875  5554 455567777776665555 45665554

>cd04645 LbH_gamma_CA_like Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E

Probab=98.82  E-value=3.5e-08  Score=87.53  Aligned_cols=62  Identities=27%  Similarity=0.431  Sum_probs=44.0

Q ss_pred             EECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcE
Q 047635          282 VIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTT  348 (388)
Q Consensus       282 ~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~  348 (388)
                      +||++|.|+.+++|.+..    ..+++||++++|+.+++|. ++.||++++||+++.|..++  .+++.
T Consensus        40 ~IG~~~~I~~~~~I~~~~----~~~~~Ig~~~~I~~~~~i~-~~~Ig~~~~Ig~~~~v~~~~~ig~~~~  103 (153)
T cd04645          40 RIGERTNIQDGSVLHVDP----GYPTIIGDNVTVGHGAVLH-GCTIGDNCLIGMGAIILDGAVIGKGSI  103 (153)
T ss_pred             EECCCCEECCCcEEecCC----CCCeEEcCCcEECCCcEEe-eeEECCCCEECCCCEEcCCCEECCCCE
Confidence            555555555555554311    1247999999999999986 58999999999999998663  55543

coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.

>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=98.82  E-value=3.9e-08  Score=101.77  Aligned_cols=70  Identities=31%  Similarity=0.507  Sum_probs=36.6

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEEC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIG  334 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IG  334 (388)
                      +.|++++.||+++.|++  +++|+++++||++|.|+.+|+|++         ++||++|.|+++++| .++.||+++.||
T Consensus       263 ~~i~~~v~ig~~~~I~~--~~~I~~~~~Ig~~~~I~~~~~I~~---------~~Ig~~~~I~~~~~i-~~~~i~~~~~ig  330 (459)
T PRK14355        263 TYIDRGVVIGRDTTIYP--GVCISGDTRIGEGCTIEQGVVIKG---------CRIGDDVTVKAGSVL-EDSVVGDDVAIG  330 (459)
T ss_pred             eEECCCeEEcCCCEEeC--CcEEeCCCEECCCCEECCCCEEeC---------CEEcCCCEECCCeEE-eCCEECCCCEEC
Confidence            44666666666666665  555565666666666655555542         344444444444443 233333333333


Q ss_pred             CC
Q 047635          335 AG  336 (388)
Q Consensus       335 ag  336 (388)
                      ++
T Consensus       331 ~~  332 (459)
T PRK14355        331 PM  332 (459)
T ss_pred             CC
Confidence            33

>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=98.82  E-value=2.5e-08  Score=101.87  Aligned_cols=70  Identities=17%  Similarity=0.246  Sum_probs=53.1

Q ss_pred             CCCEECCCcEEccCCEECC-------CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCcccc-CCCCccc
Q 047635          305 RHPKIGNGVLVGAGTCILG-------NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLD-KIPSFTM  374 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg-------~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~-~~p~~~~  374 (388)
                      .+++||++|.||+++++.+       +++||++|+||+++.|...+  .++ .++|..+.+.+....+.... +.|...+
T Consensus       341 ~d~~Ig~~~~ig~~~~~~~~~~~~~~~~~ig~~~~ig~~~~i~~~~~ig~~-~~i~~g~~v~~~v~~~~~~~~~~~~~~~  419 (430)
T PRK14359        341 GDCEIDEGTNIGAGTITCNYDGKKKHKTIIGKNVFIGSDTQLVAPVNIEDN-VLIAAGSTVTKDVPKGSLAISRAPQKNI  419 (430)
T ss_pred             cCCEECCCCEECCCceEccccCccCcCCEECCCeEEcCCCEEeCCcEECCC-CEECCCCEEccccCCCcEEEeccCceeh
Confidence            3579999999999998864       48999999999999999875  454 56666788888776666553 4665554


Q ss_pred             c
Q 047635          375 D  375 (388)
Q Consensus       375 ~  375 (388)
                      +
T Consensus       420 ~  420 (430)
T PRK14359        420 K  420 (430)
T ss_pred             h
Confidence            3

>cd05635 LbH_unknown Uncharacterized proteins, Left-handed parallel beta-Helix (LbH) domain: Members in this group are uncharacterized bacterial proteins containing a LbH domain with multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X)

Probab=98.81  E-value=4e-08  Score=81.98  Aligned_cols=83  Identities=22%  Similarity=0.229  Sum_probs=57.9

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCC-CCCCEECCCcEEccCCEECCCcEECCCCE
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSG-DRHPKIGNGVLVGAGTCILGNIKIGDGAK  332 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g-~~~~~IGd~V~IGaga~Ilg~V~IGd~v~  332 (388)
                      .+.|++++.|++++.|..  .+.||+++.||+++.|..+++||.++.+.. -.+++|++++.|+.++.| +++.||+++.
T Consensus        11 ~v~ig~~~~I~~~~~i~g--~v~IG~~~~Ig~~~~I~~~v~IG~~~~Ig~~i~~svi~~~~~i~~~~~l-g~siIg~~v~   87 (101)
T cd05635          11 PIYIGKDAVIEPFAVIEG--PVYIGPGSRVKMGARIYGNTTIGPTCKIGGEVEDSIIEGYSNKQHDGFL-GHSYLGSWCN   87 (101)
T ss_pred             CEEECCCCEECCCCEEeC--CCEECCCCEECCCCEEeCcCEECCCCEECCEECccEEcCCCEecCcCEE-eeeEECCCCE
Confidence            467788888887777765  567777777766666666666665444421 125677777788888776 5888888888


Q ss_pred             ECCCCEE
Q 047635          333 IGAGSVV  339 (388)
Q Consensus       333 IGagsVV  339 (388)
                      ||++++.
T Consensus        88 ig~~~~~   94 (101)
T cd05635          88 LGAGTNN   94 (101)
T ss_pred             ECCCcee
Confidence            8888765

Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.

>TIGR03536 DapD_gpp 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase

Probab=98.78  E-value=1.7e-08  Score=99.43  Aligned_cols=98  Identities=22%  Similarity=0.277  Sum_probs=50.4

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCE-ECCCCccC-CCCCCEECCCcEEccCC----EECCC----cE
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVT-LGGTGKMS-GDRHPKIGNGVLVGAGT----CILGN----IK  326 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvt-Igg~~~i~-g~~~~~IGd~V~IGaga----~Ilg~----V~  326 (388)
                      |+.++.|++.+.|..  ++.||++++|.+++.|+.++. +|+..... -...++||++|.||.++    ++.|+    |.
T Consensus       175 vp~gVrI~~sa~Vr~--gA~LGeGT~IM~~a~Vn~nAgtiG~~~IEgrInsGavIGhds~IG~gasIg~tLsGg~~~~V~  252 (341)
T TIGR03536       175 VPKGVRIADTARVRL--GAYVGEGTTVMHEGFINFNAGTEGPSMVEGRISAGVMVGKGSDLGGGCSTMGTLSGGGNIVIS  252 (341)
T ss_pred             ccCCcEEcCCCeEcC--CcEECCCCEEecCCEECcCcEecCCceEecccccCCEECCCCEECCCCEEeEEEeCCCceeEE
Confidence            444444444444443  444444444444444444444 33222200 01134555555555554    45667    99


Q ss_pred             ECCCCEECCCCEECCCCCCCcEEEecCcEEe
Q 047635          327 IGDGAKIGAGSVVLKDVPPRTTAVGNPARLI  357 (388)
Q Consensus       327 IGd~v~IGagsVV~~dVp~~s~VvG~PArvi  357 (388)
                      ||++|+||+||+|.-.|.++++ +|..+.++
T Consensus       253 IGe~~lIGagA~IGI~IGd~~i-IGAGavVt  282 (341)
T TIGR03536       253 VGEGCLLGANAGIGIPLGDRCT-VEAGLYIT  282 (341)
T ss_pred             ECCCcEECCCCEEeeEECCCCE-ECCCCEEe
Confidence            9999999999999433455443 34444443

2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (DapD) is involved in the succinylated branch of the "lysine biosynthesis via diaminopimelate (DAP)" pathway (GenProp0125). This model represents a clade of DapD sequences most closely related to the actinobacterial DapD family represented by the TIGR03535 model. All of the genes evaluated for the seed of this model are found in genomes where the downstream desuccinylase is present, but known DapD genes are absent. Additionally, many of the genes identified by this model are found proximal to genes involved in this lysine biosynthesis pathway.

>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=98.75  E-value=6.2e-08  Score=101.30  Aligned_cols=56  Identities=21%  Similarity=0.300  Sum_probs=39.5

Q ss_pred             CCEECCCcEEccCCEECC-------CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCC
Q 047635          306 HPKIGNGVLVGAGTCILG-------NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg-------~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~  362 (388)
                      +++||++|.||.++++..       +++||++|+||++++|...+  ++++++ |..+.+.+....
T Consensus       374 ~~~ig~~~~ig~~~~i~~~~~~~~~~~~Ig~~~~ig~~~~i~~~~~Ig~~~~i-~~gs~v~~~v~~  438 (481)
T PRK14358        374 DVTIGAETNVGAGTIVANFDGVNKHQSKVGAGVFIGSNTTLIAPRVVGDAAFI-AAGSAVHDDVPE  438 (481)
T ss_pred             CeEEcCCceEcCCEEEeCCCCccCCCCEECCCeEEcCCCEEcCCcEECCCCEE-CCCCEEecccCC
Confidence            478888888888887753       57899999999999888764  665544 344555554433

>COG0110 WbbJ Acetyltransferase (isoleucine patch superfamily) [General function prediction only]

Probab=98.74  E-value=6.8e-08  Score=87.83  Aligned_cols=110  Identities=27%  Similarity=0.395  Sum_probs=73.2

Q ss_pred             eEecCCcEECCceEEcCC-CCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEEC-----------
Q 047635          255 VDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCIL-----------  322 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Il-----------  322 (388)
                      ..+...+.+.....++-+ ..+.+|.++.|+.+|.+..    +        ..++||+++.|+.++.|.           
T Consensus        47 ~~~~~~~~i~~~~~~~~~~~~~~iG~~~~i~~~~~~~~----~--------~~i~ig~~~~i~~~v~i~~~~h~~~~~~~  114 (190)
T COG0110          47 IKIGEVAVIRPPVRIDLGEKNLTIGDLCFIGVNVVILV----G--------EGITIGDNVVVGPNVTIYTNSHPGDFVTA  114 (190)
T ss_pred             cccCCccEECCCEEEecCCcceEECCeeEEcCCcEEEe----c--------CCeEECCCceECCCcEEecCCCCCChhhc
Confidence            334444566666555422 3455555555555554311    1        134566666666666552           


Q ss_pred             --------CCcEECCCCEECCCCEECCCC-CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          323 --------GNIKIGDGAKIGAGSVVLKDV-PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       323 --------g~V~IGd~v~IGagsVV~~dV-p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                              ++++||++||||+|++|+.+| -.+..++|..+.+.++.+......++|++..+.
T Consensus       115 ~~~~~~~~~~v~IG~~vwIG~~a~IlpGV~IG~gavigagsVVtkdvp~~~iv~G~Pa~vir~  177 (190)
T COG0110         115 NIGALVGAGPVTIGEDVWIGAGAVILPGVTIGEGAVIGAGSVVTKDVPPYGIVAGNPARVIRK  177 (190)
T ss_pred             ccCCceecCCeEECCCeEEcCccEECCCEEECCCcEEeeCCEEeCccCCCeEEeCCcceEEEe
Confidence                    359999999999999999995 445578899999999888887778999976543

>cd05825 LbH_wcaF_like wcaF-like: This group is composed of the protein product of the E

Probab=98.72  E-value=8.7e-08  Score=80.20  Aligned_cols=101  Identities=21%  Similarity=0.174  Sum_probs=53.3

Q ss_pred             CCcEECCceEEcCCCCcEEC--CCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCC
Q 047635          259 PGAKIGRGLLFDHATGVVVG--ETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAG  336 (388)
Q Consensus       259 ~~a~IG~gv~I~~gtgVvIG--~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGag  336 (388)
                      .+.+||+++.|++  +++|.  ..++||++|.|++++.|......     ....+      ...+.++++||++|+||++
T Consensus         2 ~~i~iG~~~~I~~--~~~i~~~~~i~IG~~~~I~~~~~I~~~~h~-----~~~~~------~~~~~~~v~Ig~~~~ig~~   68 (107)
T cd05825           2 WNLTIGDNSWIGE--GVWIYNLAPVTIGSDACISQGAYLCTGSHD-----YRSPA------FPLITAPIVIGDGAWVAAE   68 (107)
T ss_pred             ceEEECCCCEECC--CCEEeeCCceEECCCCEECCCeEeecCCCC-----CCcCc------cceecCCEEECCCCEECCC
Confidence            4567888888877  56664  35777888888777777542211     11111      1122344555555555555


Q ss_pred             CEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcc
Q 047635          337 SVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFT  373 (388)
Q Consensus       337 sVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~  373 (388)
                      ++|..++  .+++ ++|.-+.+.+.........+.|++.
T Consensus        69 ~~i~~g~~Ig~~~-~i~~gs~v~~~~~~~~~~~G~Pa~~  106 (107)
T cd05825          69 AFVGPGVTIGEGA-VVGARSVVVRDLPAWTVYAGNPAVP  106 (107)
T ss_pred             CEECCCCEECCCC-EECCCCEEeCcCCCCCEEECCccEe
Confidence            5554442  3332 3333455545445455556777653

coli wcaF gene and similar proteins. WcaF is part of the gene cluster responsible for the biosynthesis of the extracellular polysaccharide colanic acid. The wcaF protein is predicted to contain a left-handed parallel beta-helix (LbH) domain encoded by imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Many are trimeric in their active forms.

>cd00208 LbetaH Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X)

Probab=98.72  E-value=9e-08  Score=73.69  Aligned_cols=68  Identities=29%  Similarity=0.402  Sum_probs=52.3

Q ss_pred             EecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCC--------CEECCCCccCCCCCCEECCCcEEccCCEECCCcEE
Q 047635          256 DIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHN--------VTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKI  327 (388)
Q Consensus       256 ~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~g--------vtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~I  327 (388)
                      .|++++.|+.++.|..  .++||+++.|++++.|+..        ++|++        ++.||.++.|..++.|..++.|
T Consensus         2 ~ig~~~~i~~~~~i~~--~~~Ig~~~~I~~~~~i~~~~~~~~~~~~~ig~--------~~~v~~~~~i~~~~~ig~~~~i   71 (78)
T cd00208           2 FIGEGVKIHPKAVIRG--PVVIGDNVNIGPGAVIGAATGPNEKNPTIIGD--------NVEIGANAVIHGGVKIGDNAVI   71 (78)
T ss_pred             EECCCeEECCCCEEeC--cEEECCCCEECCCCEEEeccCCCccCCcEECC--------CcEECCCCEEeCCCEECCCCEE
Confidence            4777788888887765  6788888888888888754        67765        6778888888878888888888


Q ss_pred             CCCCEE
Q 047635          328 GDGAKI  333 (388)
Q Consensus       328 Gd~v~I  333 (388)
                      |+++.|
T Consensus        72 ~~~s~v   77 (78)
T cd00208          72 GAGAVV   77 (78)
T ss_pred             CcCcEe
Confidence            887776

Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms.

>cd05824 LbH_M1P_guanylylT_C Mannose-1-phosphate guanylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Mannose-1-phosphate guanylyltransferase is also known as GDP-mannose pyrophosphorylase

Probab=98.71  E-value=7.6e-08  Score=76.14  Aligned_cols=27  Identities=26%  Similarity=0.279  Sum_probs=12.3

Q ss_pred             CEECCCcEEccCCEECCCcEECCCCEE
Q 047635          307 PKIGNGVLVGAGTCILGNIKIGDGAKI  333 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~V~IGd~v~I  333 (388)
                      ++||+++.||+++.+.++..||+++.|
T Consensus        52 sii~~~~~v~~~~~~~~~~~ig~~~~i   78 (80)
T cd05824          52 SIVGWNSTVGRWTRLENVTVLGDDVTI   78 (80)
T ss_pred             CEEeCCCEECCCcEEecCEEECCceEE
Confidence            344444444444444444444444444

It catalyzes the synthesis of GDP-mannose from GTP and mannose-1-phosphate, and is involved in the maintenance of cell wall integrity and glycosylation. Similar to ADP-glucose pyrophosphorylase, it contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain, presumably with 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.

>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=98.71  E-value=9.1e-08  Score=98.62  Aligned_cols=63  Identities=21%  Similarity=0.288  Sum_probs=35.4

Q ss_pred             CEECCCcEEccCCEECC-------CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCC
Q 047635          307 PKIGNGVLVGAGTCILG-------NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIP  370 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg-------~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p  370 (388)
                      ++||++|.||+|+.+..       +++||++++||.+++|..++  .+++ ++|.-+.+.+..+....+.+.|
T Consensus       369 ~~ig~~~~ig~~~~~~~~~~~~~~~~~igd~~~ig~~s~i~~~~~ig~~~-~v~~~~~v~~~~~~~~~~~~~~  440 (458)
T PRK14354        369 AEVGENVNIGCGTITVNYDGKNKFKTIIGDNAFIGCNSNLVAPVTVGDNA-YIAAGSTITKDVPEDALAIARA  440 (458)
T ss_pred             cccCCceEEcCceeecccccccccCCEECCCcEEccCCEEeCCcEECCCC-EECCCCEECCCCCCCCEEEecc
Confidence            34555555555555432       46777777777777777664  4443 4455566666555444434433

>cd03353 LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase

Probab=98.70  E-value=8.7e-08  Score=87.88  Aligned_cols=83  Identities=25%  Similarity=0.384  Sum_probs=42.2

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEEC-----CCCccCCC---CCCEECCCcEEccCCEECCCcE
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLG-----GTGKMSGD---RHPKIGNGVLVGAGTCILGNIK  326 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIg-----g~~~i~g~---~~~~IGd~V~IGaga~Ilg~V~  326 (388)
                      +.+++.++||+++.|.+  ++.|+++++||+||.|++++.|+     .+..+...   .+++||+++.||+++.|..++.
T Consensus        10 ~~~~~~v~ig~~~~I~~--~a~i~~~~~Ig~~~~I~~~~~I~~~~Ig~~~~I~~~~~i~~~~ig~~~~Ig~~~~I~~~~~   87 (193)
T cd03353          10 TYIDGDVEIGVDVVIDP--GVILEGKTVIGEDCVIGPNCVIKDSTIGDGVVIKASSVIEGAVIGNGATVGPFAHLRPGTV   87 (193)
T ss_pred             EEEcCCeEECCCcEECC--CCEEeCcCEECCCCEECCCcEEeCCEECCCCEEcCCeEEEeeEECCCCEECCccEEcCccE
Confidence            33444444444444444  33333444444444444333333     22222111   1356777777777777766777


Q ss_pred             ECCCCEECCCCEE
Q 047635          327 IGDGAKIGAGSVV  339 (388)
Q Consensus       327 IGd~v~IGagsVV  339 (388)
                      ||+++.|++++.+
T Consensus        88 Ig~~~~Ig~~~~i  100 (193)
T cd03353          88 LGEGVHIGNFVEI  100 (193)
T ss_pred             ECCCCEECCcEEE
Confidence            7777776666554

It is a bifunctional bacterial enzyme that catalyzes two consecutive steps in the formation of UDP-N-acetylglucosamine (UDP-GlcNAc), an important precursor in bacterial cell wall formation. The two enzymatic activities, uridyltransferase and acetyltransferase, are carried out by two independent domains. The C-terminal LbH domain possesses the acetyltransferase activity. It catalyzes the CoA-dependent acetylation of GlcN-1-phosphate to GlcNAc-1-phosphate. The LbH domain contains 10 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X. The acetyltransferase active site is located at the interface between two subunits of the active LbH trimer.

>COG1043 LpxA Acyl-[acyl carrier protein]

Probab=98.70  E-value=3.2e-08  Score=93.73  Aligned_cols=36  Identities=28%  Similarity=0.201  Sum_probs=20.4

Q ss_pred             CEECCCcEEccCCEECC-------CcEECCCCEECCCCEECCC
Q 047635          307 PKIGNGVLVGAGTCILG-------NIKIGDGAKIGAGSVVLKD  342 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg-------~V~IGd~v~IGagsVV~~d  342 (388)
                      .+||+++.|-..++|..       -++|||++++-+.+-|..|
T Consensus        82 l~IG~~n~IRE~vTi~~GT~~g~g~T~IGdnnl~May~HVAHD  124 (260)
T COG1043          82 LIIGDNNTIREFVTIHRGTVQGGGVTRIGDNNLIMAYAHVAHD  124 (260)
T ss_pred             EEECCCCeEeeEEEEeccccCCceeEEECCCCEEEEeeeeecc
Confidence            56677776666666622       2455665555555555444

>TIGR03535 DapD_actino 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase

Probab=98.68  E-value=7.5e-08  Score=94.40  Aligned_cols=98  Identities=20%  Similarity=0.321  Sum_probs=64.6

Q ss_pred             eeeEecCCcEECCceEEcCCCCcEECCCcEECCCc-EEcCCCEECCCCccCCCCCCEECCCcEEccCCEECC----C---
Q 047635          253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNV-SILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILG----N---  324 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV-~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg----~---  324 (388)
                      .++.|.++..+..|++|+.  |++|...++|.-|+ +||.+ .|.  +.+  +++++|||+|.|++++.|++    +   
T Consensus       152 ~gVRI~~~~rVRlGAyLGe--GtvVm~~a~VN~nAgtIG~~-iI~--g~I--~HdvvIGd~~~IgpGvsI~G~LsGg~~~  224 (319)
T TIGR03535       152 TGVRIGDADRVRLGAHLAE--GTTVMHEGFVNFNAGTLGAS-MVE--GRI--SAGVVVGDGSDIGGGASIMGTLSGGGKE  224 (319)
T ss_pred             CccEECCCceeeeccEECC--CCEEcCCCEEccCceEecCc-eEE--EEE--ccCCEECCCCEECCCceecceecCCCcc
Confidence            3555666666666555555  55555555555555 45553 331  222  24689999999999999555    8   


Q ss_pred             -cEECCCCEECCCCEECCCCCCCcEEEecCcEEec
Q 047635          325 -IKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG  358 (388)
Q Consensus       325 -V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~  358 (388)
                       |.||++|+||+||+|.-.|.+++ ++|..+.+++
T Consensus       225 pV~IGe~~~IGagA~IGI~IGd~~-VVGAGaVVtk  258 (319)
T TIGR03535       225 VISIGERCLLGANSGLGISLGDDC-VVEAGLYVTA  258 (319)
T ss_pred             cEEECCCcEECCCCEECeEECCCC-EECCCCEEeC
Confidence             99999999999999944455554 3455565554

Alternate name: tetrahydrodipicolinate N-succinyltransferase.

>COG2171 DapD Tetrahydrodipicolinate N-succinyltransferase [Amino acid transport and metabolism]

Probab=98.66  E-value=3.9e-08  Score=94.52  Aligned_cols=86  Identities=26%  Similarity=0.370  Sum_probs=59.8

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECC--------Cc
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILG--------NI  325 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg--------~V  325 (388)
                      +..+-.+++||+|+.+.+  +..|.=++.++..++|-.++++|+        ..+||+||.||.||.|+|        ++
T Consensus       114 ~a~VR~ga~i~~gtvvM~--~sfVNigA~~~~gtMVd~~as~G~--------~a~VGkn~higgGa~I~GVLep~~a~Pv  183 (271)
T COG2171         114 GAIVRLGAYIAKGTVVMP--ESFVNIGAGTGEGTMVDGRASVGS--------CAQVGKNSHIGGGASIGGVLEPLQANPV  183 (271)
T ss_pred             ccEEeeccEECCCcEEcc--cceEEECcccCcceEEeeeeeeec--------cEEECCCcccCCcceEeEEecCCCCCCe
Confidence            333444444444444444  223333466777777777778876        579999999999999955        78


Q ss_pred             EECCCCEECCCCEECCCC--CCCcEE
Q 047635          326 KIGDGAKIGAGSVVLKDV--PPRTTA  349 (388)
Q Consensus       326 ~IGd~v~IGagsVV~~dV--p~~s~V  349 (388)
                      .|||+|.|||+|++..+|  .+|+++
T Consensus       184 ~IgdncliGAns~~veGV~vGdg~VV  209 (271)
T COG2171         184 IIGDNCLIGANSEVVEGVIVGDGCVV  209 (271)
T ss_pred             EECCccEeccccceEeeeEeCCCcEE
Confidence            999999999999877764  455543

>cd04652 LbH_eIF2B_gamma_C eIF-2B gamma subunit, C-terminal Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator, a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha, beta, gamma, delta and epsilon)

Probab=98.65  E-value=1.8e-07  Score=74.14  Aligned_cols=33  Identities=30%  Similarity=0.388  Sum_probs=17.3

Q ss_pred             CEECCCcEEccCCEECCCcEECCCCEECCCCEEC
Q 047635          307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVL  340 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~  340 (388)
                      .+|++++.||.++.| .++.|++++.|++++.+.
T Consensus        34 s~i~~~~~ig~~~~l-~~svi~~~~~i~~~~~v~   66 (81)
T cd04652          34 CVIMDNVTIEDGCTL-ENCIIGNGAVIGEKCKLK   66 (81)
T ss_pred             cEEeCCCEECCCCEE-eccEEeCCCEECCCCEEc
Confidence            345555555555554 345555555555555553

eIF2B is important for regenerating GTP-bound eIF2 during the initiation process. This event is obligatory for eIF2 to bind initiator methionyl-tRNA, forming the ternary initiation complex. The eIF-2B gamma subunit contains an N-terminal domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH domain with 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). The epsilon and gamma subunits form the catalytic subcomplex of eIF-2B, which binds eIF2 and catalyzes guanine nucleotide exchange.

>cd05787 LbH_eIF2B_epsilon eIF-2B epsilon subunit, central Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator, a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha, beta, gamma, delta and epsilon)

Probab=98.64  E-value=1.9e-07  Score=72.73  Aligned_cols=64  Identities=34%  Similarity=0.546  Sum_probs=31.4

Q ss_pred             ECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEE
Q 047635          263 IGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV  339 (388)
Q Consensus       263 IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV  339 (388)
                      ||+++.|+.  ++.|+ ++.||++|.|++++.|.         +..|++++.|+.++.|. ++.|++++.|+.++.+
T Consensus         2 ig~~~~I~~--~~~i~-~s~ig~~~~ig~~~~i~---------~s~i~~~~~i~~~~~i~-~~~i~~~~~i~~~~~i   65 (79)
T cd05787           2 IGRGTSIGE--GTTIK-NSVIGRNCKIGKNVVID---------NSYIWDDVTIEDGCTIH-HSIVADGAVIGKGCTI   65 (79)
T ss_pred             ccCCCEECC--CCEEe-ccEECCCCEECCCCEEe---------CcEEeCCCEECCCCEEe-CcEEcCCCEECCCCEE
Confidence            444444444  44443 24445555555444443         23555555555555543 4555555555555544

eIF2B is important for regenerating GTP-bound eIF2 during the initiation process. This event is obligatory for eIF2 to bind initiator methionyl-tRNA, forming the ternary initiation complex. The eIF-2B epsilon subunit contains an N-terminal domain that resembles a dinucleotide-binding Rossmann fold, a central LbH domain containing 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), and a C-terminal domain of unknown function that is present in eIF-4 gamma, eIF-5, and eIF-2B epsilon. The epsilon and gamma subunits form the catalytic subcomplex of eIF-2B, which binds eIF2 and catalyzes guanine nucleotide exchange.

>cd04652 LbH_eIF2B_gamma_C eIF-2B gamma subunit, C-terminal Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator, a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha, beta, gamma, delta and epsilon)

Probab=98.63  E-value=2e-07  Score=73.94  Aligned_cols=46  Identities=28%  Similarity=0.530  Sum_probs=28.6

Q ss_pred             EEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCC
Q 047635          288 SILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGS  337 (388)
Q Consensus       288 ~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGags  337 (388)
                      .|++++.|+.+..+.   +++||+++.||+++.| .++.||+++.|++++
T Consensus        35 ~i~~~~~ig~~~~l~---~svi~~~~~i~~~~~v-~~~ii~~~~~i~~~~   80 (81)
T cd04652          35 VIMDNVTIEDGCTLE---NCIIGNGAVIGEKCKL-KDCLVGSGYRVEAGT   80 (81)
T ss_pred             EEeCCCEECCCCEEe---ccEEeCCCEECCCCEE-ccCEECCCcEeCCCC
Confidence            344444554443332   4677888888888776 367777777776653

eIF2B is important for regenerating GTP-bound eIF2 during the initiation process. This event is obligatory for eIF2 to bind initiator methionyl-tRNA, forming the ternary initiation complex. The eIF-2B gamma subunit contains an N-terminal domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH domain with 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). The epsilon and gamma subunits form the catalytic subcomplex of eIF-2B, which binds eIF2 and catalyzes guanine nucleotide exchange.

>cd05635 LbH_unknown Uncharacterized proteins, Left-handed parallel beta-Helix (LbH) domain: Members in this group are uncharacterized bacterial proteins containing a LbH domain with multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X)

Probab=98.60  E-value=4.7e-07  Score=75.53  Aligned_cols=72  Identities=18%  Similarity=0.210  Sum_probs=46.8

Q ss_pred             CcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEc---cCCEECCCcEECCCCEECCC
Q 047635          260 GAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG---AGTCILGNIKIGDGAKIGAG  336 (388)
Q Consensus       260 ~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IG---aga~Ilg~V~IGd~v~IGag  336 (388)
                      .++|++++.|..  ++.|+..+.||+++.|+.+++|++        ++.||++|.||   .+++|.++++|++++.|+ +
T Consensus        11 ~v~ig~~~~I~~--~~~i~g~v~IG~~~~Ig~~~~I~~--------~v~IG~~~~Ig~~i~~svi~~~~~i~~~~~lg-~   79 (101)
T cd05635          11 PIYIGKDAVIEP--FAVIEGPVYIGPGSRVKMGARIYG--------NTTIGPTCKIGGEVEDSIIEGYSNKQHDGFLG-H   79 (101)
T ss_pred             CEEECCCCEECC--CCEEeCCCEECCCCEECCCCEEeC--------cCEECCCCEECCEECccEEcCCCEecCcCEEe-e
Confidence            367777777766  666766777777777777777765        56777777776   455555555555555554 4


Q ss_pred             CEECCC
Q 047635          337 SVVLKD  342 (388)
Q Consensus       337 sVV~~d  342 (388)
                      ++|..+
T Consensus        80 siIg~~   85 (101)
T cd05635          80 SYLGSW   85 (101)
T ss_pred             eEECCC
Confidence            444433

Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.

>KOG3121 consensus Dynactin, subunit p25 [Cytoskeleton]

Probab=98.59  E-value=8.7e-08  Score=84.23  Aligned_cols=107  Identities=21%  Similarity=0.353  Sum_probs=69.0

Q ss_pred             eEecCCcEECCceEEcC-CCCcEECCCcEECCCcEEcCCC------------EECCCCccCCC---CCCEECCCcEEccC
Q 047635          255 VDIHPGAKIGRGLLFDH-ATGVVVGETAVIGDNVSILHNV------------TLGGTGKMSGD---RHPKIGNGVLVGAG  318 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~-gtgVvIG~~~~IGdnV~Ig~gv------------tIgg~~~i~g~---~~~~IGd~V~IGag  318 (388)
                      +.+...+.+-.|++|.. -.++.+|..|+++.++.|.+.-            +||+...+..+   .-..||..|.+|.+
T Consensus        34 I~lnGKtIv~~g~iIRGDLAnVr~GryCV~ksrsvIRPp~K~FSKg~affp~hiGdhVFieE~cVVnAAqIgsyVh~Gkn  113 (184)
T KOG3121|consen   34 ILLNGKTIVEEGVIIRGDLANVRIGRYCVLKSRSVIRPPMKIFSKGPAFFPVHIGDHVFIEEECVVNAAQIGSYVHLGKN  113 (184)
T ss_pred             EEEcCcEEEeeCcEEecccccceEcceEEeccccccCCchHHhcCCceeeeeeecceEEEecceEeehhhheeeeEeccc
Confidence            44555566666666654 2466777777766666553221            22221111111   02467777777777


Q ss_pred             CEECCCcEECCCCEECCCCEECCC--CCCCcEEEecCcEEeccCC
Q 047635          319 TCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       319 a~Ilg~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~~~  361 (388)
                      ++|+.++++-|.|.|-.++|+..+  +|+.+++.|+|+.+.+..+
T Consensus       114 aviGrrCVlkdCc~ild~tVlPpet~vppy~~~~g~p~~~~G~~P  158 (184)
T KOG3121|consen  114 AVIGRRCVLKDCCRILDDTVLPPETLVPPYSTIGGNPAQVVGTEP  158 (184)
T ss_pred             eeEcCceEhhhheeccCCcccCcccccCCceEEcCCCceeeccCc
Confidence            777777777777778888888776  6999999999999998654

>cd03356 LbH_G1P_AT_C_like Left-handed parallel beta-Helix (LbH) domain of a group of proteins with similarity to glucose-1-phosphate adenylyltransferase: Included in this family are glucose-1-phosphate adenylyltransferase, mannose-1-phosphate guanylyltransferase, and the eukaryotic translation initiation factor eIF-2B subunits, epsilon and gamma

Probab=98.58  E-value=4.8e-07  Score=70.88  Aligned_cols=65  Identities=35%  Similarity=0.528  Sum_probs=32.9

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCC
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAG  336 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGag  336 (388)
                      |++++.|++++.|.        + +.||++|.|+.++.|.         +++||+++.|+.++.|. ++.|++++.|+++
T Consensus         2 ig~~~~I~~~~~i~--------~-s~ig~~~~Ig~~~~i~---------~svi~~~~~i~~~~~i~-~svv~~~~~i~~~   62 (79)
T cd03356           2 IGESTVIGENAIIK--------N-SVIGDNVRIGDGVTIT---------NSILMDNVTIGANSVIV-DSIIGDNAVIGEN   62 (79)
T ss_pred             ccCCcEECCCCEEe--------C-CEECCCCEECCCCEEe---------CCEEeCCCEECCCCEEE-CCEECCCCEECCC
Confidence            44555555544443        2 4444444444444443         24556666666665543 4455555555555


Q ss_pred             CEEC
Q 047635          337 SVVL  340 (388)
Q Consensus       337 sVV~  340 (388)
                      +.+.
T Consensus        63 ~~i~   66 (79)
T cd03356          63 VRVV   66 (79)
T ss_pred             CEEc
Confidence            5543

Most members of this family contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold, followed by a LbH fold domain with at least 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). eIF-2B epsilon contains an additional domain of unknown function at the C-terminus. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.

>cd03356 LbH_G1P_AT_C_like Left-handed parallel beta-Helix (LbH) domain of a group of proteins with similarity to glucose-1-phosphate adenylyltransferase: Included in this family are glucose-1-phosphate adenylyltransferase, mannose-1-phosphate guanylyltransferase, and the eukaryotic translation initiation factor eIF-2B subunits, epsilon and gamma

Probab=98.58  E-value=3.6e-07  Score=71.63  Aligned_cols=68  Identities=24%  Similarity=0.351  Sum_probs=42.2

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCc-----EECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETA-----VIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGD  329 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~-----~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd  329 (388)
                      ..|++++.|++ +.|++  ++.||+++     +|++++.|+.++.|.         +++|++++.|+.++.|..+..||+
T Consensus         6 ~~I~~~~~i~~-s~ig~--~~~Ig~~~~i~~svi~~~~~i~~~~~i~---------~svv~~~~~i~~~~~i~~~~~ig~   73 (79)
T cd03356           6 TVIGENAIIKN-SVIGD--NVRIGDGVTITNSILMDNVTIGANSVIV---------DSIIGDNAVIGENVRVVNLCIIGD   73 (79)
T ss_pred             cEECCCCEEeC-CEECC--CCEECCCCEEeCCEEeCCCEECCCCEEE---------CCEECCCCEECCCCEEcCCeEECC
Confidence            44555555543 44444  44444444     445555555555553         368888888888888877788888


Q ss_pred             CCEEC
Q 047635          330 GAKIG  334 (388)
Q Consensus       330 ~v~IG  334 (388)
                      ++.|+
T Consensus        74 ~~~i~   78 (79)
T cd03356          74 DVVVE   78 (79)
T ss_pred             CeEEC
Confidence            87776

Most members of this family contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold, followed by a LbH fold domain with at least 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). eIF-2B epsilon contains an additional domain of unknown function at the C-terminus. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.

>cd04651 LbH_G1P_AT_C Glucose-1-phosphate adenylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Glucose-1-phosphate adenylyltransferase is also known as ADP-glucose synthase or ADP-glucose pyrophosphorylase

Probab=98.58  E-value=3.1e-07  Score=76.67  Aligned_cols=53  Identities=21%  Similarity=0.177  Sum_probs=41.9

Q ss_pred             cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC
Q 047635          281 AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV  343 (388)
Q Consensus       281 ~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV  343 (388)
                      +.|+++|.|+.++.|.         +..|++++.||.++.+ .++.||+++.|+++++|..+.
T Consensus        29 svi~~~~~Ig~~~~I~---------~siI~~~~~Ig~~~~i-~~siig~~~~Ig~~~~v~~~~   81 (104)
T cd04651          29 SVLFRGVRVGSGSVVE---------DSVIMPNVGIGRNAVI-RRAIIDKNVVIPDGVVIGGDP   81 (104)
T ss_pred             CEEeCCCEECCCCEEE---------EeEEcCCCEECCCCEE-EeEEECCCCEECCCCEECCCc
Confidence            4555555555555553         4789999999999998 589999999999999998874

It catalyzes the first committed and rate-limiting step in starch biosynthesis in plants and glycogen biosynthesis in bacteria. It is the enzymatic site for regulation of storage polysaccharide accumulation in plants and bacteria. The enzyme is a homotetramer, with each subunit containing an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain with at 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). The LbH domain is involved in cooperative allosteric regulation and oligomerization.

>cd05824 LbH_M1P_guanylylT_C Mannose-1-phosphate guanylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Mannose-1-phosphate guanylyltransferase is also known as GDP-mannose pyrophosphorylase

Probab=98.58  E-value=4e-07  Score=71.99  Aligned_cols=65  Identities=29%  Similarity=0.349  Sum_probs=36.7

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCC
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAG  336 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGag  336 (388)
                      |++++.||+++.|        |++++||++|.|+.++.|.+         ..|++++.|+.++.|. ++.||+++.|+++
T Consensus         2 i~~~~~I~~~~~i--------~~~~~Ig~~~~Ig~~~~i~~---------sii~~~~~i~~~~~i~-~sii~~~~~v~~~   63 (80)
T cd05824           2 IDPSAKIGKTAKI--------GPNVVIGPNVTIGDGVRLQR---------CVILSNSTVRDHSWVK-SSIVGWNSTVGRW   63 (80)
T ss_pred             cCCCCEECCCCEE--------CCCCEECCCCEECCCcEEee---------eEEcCCCEECCCCEEe-CCEEeCCCEECCC
Confidence            4555555555444        44445555555555555542         4666666666666654 4566666666666


Q ss_pred             CEE
Q 047635          337 SVV  339 (388)
Q Consensus       337 sVV  339 (388)
                      +.+
T Consensus        64 ~~~   66 (80)
T cd05824          64 TRL   66 (80)
T ss_pred             cEE
Confidence            555

It catalyzes the synthesis of GDP-mannose from GTP and mannose-1-phosphate, and is involved in the maintenance of cell wall integrity and glycosylation. Similar to ADP-glucose pyrophosphorylase, it contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain, presumably with 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.

>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=98.56  E-value=3.4e-07  Score=94.44  Aligned_cols=84  Identities=21%  Similarity=0.266  Sum_probs=48.1

Q ss_pred             eeeEecCCcEECCceEEcCCC----CcEECCCcEECCCcEE-----cCCCEECCCCccCCCCCCEECCCcEEccCCEECC
Q 047635          253 FSVDIHPGAKIGRGLLFDHAT----GVVVGETAVIGDNVSI-----LHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gt----gVvIG~~~~IGdnV~I-----g~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg  323 (388)
                      ..+.|++++.|++++.|..+.    +++||+++.||++|.|     +++|.|+..+.+   .+++||++|.||.++.|.+
T Consensus       262 ~~~~i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~i~~~~~I~~~~~i---~~~~ig~~~~Ig~~~~i~~  338 (456)
T PRK14356        262 ESVRIGPRATIEPGAEIYGPCEIYGASRIARGAVIHSHCWLRDAVVSSGATIHSFSHL---EGAEVGDGCSVGPYARLRP  338 (456)
T ss_pred             CcEEECCCcEECCCCEEeCCcEEeCceEECCCCEECCCeEEEeeEECCCCEEeeeEEE---cccceecccEECCceEECC
Confidence            345666666666666665511    3445555555544433     333333332222   2467777777777777777


Q ss_pred             CcEECCCCEECCCCEE
Q 047635          324 NIKIGDGAKIGAGSVV  339 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV  339 (388)
                      +++||++|.||.++.+
T Consensus       339 ~~~ig~~~~ig~~~~i  354 (456)
T PRK14356        339 GAVLEEGARVGNFVEM  354 (456)
T ss_pred             CCEECCCCEecCCcee
Confidence            7777777777776544

>KOG1461 consensus Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6) [Translation, ribosomal structure and biogenesis]

Probab=98.55  E-value=1.4e-07  Score=99.32  Aligned_cols=56  Identities=29%  Similarity=0.411  Sum_probs=29.2

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCc-----EECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETA-----VIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI  321 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~-----~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I  321 (388)
                      +.+...+.+|.++.|+.  |..||.++     +||.||.||.+|.|.+         ..||+||+||.||.|
T Consensus       322 v~~~~~~~v~~~~~ig~--gT~Ig~g~~I~NSVIG~~c~IgsN~~I~~---------S~iw~~v~Igdnc~I  382 (673)
T KOG1461|consen  322 VVLSHSVIVGANVVIGA--GTKIGSGSKISNSVIGANCRIGSNVRIKN---------SFIWNNVTIGDNCRI  382 (673)
T ss_pred             ceehhhccccceEEecc--cccccCCCeeecceecCCCEecCceEEee---------eeeecCcEECCCceE
Confidence            34444455556666655  44555543     4555555555554432         355555555555543

>cd04647 LbH_MAT_like Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins

Probab=98.47  E-value=1.9e-06  Score=71.03  Aligned_cols=79  Identities=30%  Similarity=0.388  Sum_probs=53.0

Q ss_pred             CcEECCceEEcCCCCcEECC--CcEECCCcEEcCCCEECCCCccCCCC-----CCEECCCcEEccCCEECCCcEECCCCE
Q 047635          260 GAKIGRGLLFDHATGVVVGE--TAVIGDNVSILHNVTLGGTGKMSGDR-----HPKIGNGVLVGAGTCILGNIKIGDGAK  332 (388)
Q Consensus       260 ~a~IG~gv~I~~gtgVvIG~--~~~IGdnV~Ig~gvtIgg~~~i~g~~-----~~~IGd~V~IGaga~Ilg~V~IGd~v~  332 (388)
                      ++.||++++|+.  ++.|..  .+.||++|.|+++|.|..........     +..+..++.||.++.|..++.|++++.
T Consensus         1 ~v~Ig~~~~I~~--~~~i~~~~~v~IG~~~~Ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~ig~~~~i~~~~~   78 (109)
T cd04647           1 NISIGDNVYIGP--GCVISAGGGITIGDNVLIGPNVTIYDHNHDIDDPERPIEQGVTSAPIVIGDDVWIGANVVILPGVT   78 (109)
T ss_pred             CeEECCCcEECC--CCEEecCCceEECCCCEECCCCEEECCCCCCCccccccccccccCCeEECCCCEECCCCEEcCCCE
Confidence            367999999988  777877  89999999999999998752211111     123455566666666666666666666


Q ss_pred             ECCCCEEC
Q 047635          333 IGAGSVVL  340 (388)
Q Consensus       333 IGagsVV~  340 (388)
                      ||.++++.
T Consensus        79 ig~~~~i~   86 (109)
T cd04647          79 IGDGAVVG   86 (109)
T ss_pred             ECCCCEEC
Confidence            66665554

MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.

>cd03354 LbH_SAT Serine acetyltransferase (SAT): SAT catalyzes the CoA-dependent acetylation of the side chain hydroxyl group of L-serine to form O-acetylserine, as the first step of a two-step biosynthetic pathway in bacteria and plants leading to the formation of L-cysteine

Probab=98.43  E-value=2e-06  Score=70.84  Aligned_cols=20  Identities=40%  Similarity=0.579  Sum_probs=11.1

Q ss_pred             CCCcEECCCCEECCCCEECC
Q 047635          322 LGNIKIGDGAKIGAGSVVLK  341 (388)
Q Consensus       322 lg~V~IGd~v~IGagsVV~~  341 (388)
                      .+++.||++|+|++++.+..
T Consensus        52 ~~~~~Ig~~~~Ig~~~~i~~   71 (101)
T cd03354          52 KRHPTIGDNVVIGAGAKILG   71 (101)
T ss_pred             CCCCEECCCcEEcCCCEEEC
Confidence            44445666666665555544

This reaction represents a key metabolic point of regulation for the cysteine biosynthetic pathway due to its feedback inhibition by cysteine. The enzyme is a 175 kDa homohexamer, composed of a dimer of homotrimers. Each subunit contains an N-terminal alpha helical region and a C-terminal left-handed beta-helix (LbH) subdomain with 5 turns, each containing a hexapeptide repeat motif characteristic of the acyltransferase superfamily of enzymes. The trimer interface mainly involves the C-terminal LbH subdomain while the dimer (of trimers) interface is mediated by the N-terminal alpha helical subdomain.

>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form

Probab=98.43  E-value=1.1e-06  Score=87.87  Aligned_cols=95  Identities=19%  Similarity=0.235  Sum_probs=40.6

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCC--CCCEECCCcEEccCCEECCCcEECCCCE
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGD--RHPKIGNGVLVGAGTCILGNIKIGDGAK  332 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~--~~~~IGd~V~IGaga~Ilg~V~IGd~v~  332 (388)
                      +.|++++.| .++.|..  +++||++|.|+ ++.|+++|+||.++.+.+.  .+++|++++.|+.++....++.||+++.
T Consensus       255 ~~i~~~~~i-~~~~i~~--~~~Ig~~~~I~-~~~i~~~~~Ig~~~~i~~~~i~~s~i~~~~~i~~~~~~~~~~ii~~~~~  330 (353)
T TIGR01208       255 VVVGEGAKI-VNSVIRG--PAVIGEDCIIE-NSYIGPYTSIGEGVVIRDAEVEHSIVLDESVIEGVQARIVDSVIGKKVR  330 (353)
T ss_pred             EEECCCCEE-eCCEEEC--CcEECCCCEEc-CcEECCCCEECCCCEEeeeEEEeeEEcCCCEEcCCcceeecCEEcCCCE
Confidence            344444444 3333333  34555555443 3344444444443333210  1234444444444431123455555555


Q ss_pred             ECCCCEECCCCCCCcEEEecCcEE
Q 047635          333 IGAGSVVLKDVPPRTTAVGNPARL  356 (388)
Q Consensus       333 IGagsVV~~dVp~~s~VvG~PArv  356 (388)
                      |+.++.+..+   ...++|.++++
T Consensus       331 i~~~~~~~~~---~~~~~g~~~~~  351 (353)
T TIGR01208       331 IKGNRRRPGD---LRLTIGDYSQV  351 (353)
T ss_pred             ECCCcccccc---cceEEcCCcee
Confidence            5555444322   23556666543

Alternate name: dTDP-D-glucose synthase

>cd03349 LbH_XAT Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others

Probab=98.39  E-value=3.1e-06  Score=75.08  Aligned_cols=114  Identities=19%  Similarity=0.170  Sum_probs=64.7

Q ss_pred             cEECCceEEcCCCCcEEC-CCcEECCCcEEcCCCEECCC-CccCC--CCCC-EECCCcE----EccCCEECCCcEECCCC
Q 047635          261 AKIGRGLLFDHATGVVVG-ETAVIGDNVSILHNVTLGGT-GKMSG--DRHP-KIGNGVL----VGAGTCILGNIKIGDGA  331 (388)
Q Consensus       261 a~IG~gv~I~~gtgVvIG-~~~~IGdnV~Ig~gvtIgg~-~~i~g--~~~~-~IGd~V~----IGaga~Ilg~V~IGd~v  331 (388)
                      ..||++++|+.+ ...++ ..+.||++|.|+++|+|... .+...  ...+ .++++..    ......+.++++||++|
T Consensus         2 ~~iG~~s~i~~~-~~~~~~~~i~IG~~~~I~~~v~i~~~~~H~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~   80 (145)
T cd03349           2 ISVGDYSYGSGP-DCDVGGDKLSIGKFCSIAPGVKIGLGGNHPTDWVSTYPFYIFGGEWEDDAKFDDWPSKGDVIIGNDV   80 (145)
T ss_pred             EEEeCceeeCCC-CceEeCCCeEECCCCEECCCCEECCCCCCCCCCccccceEeeccccccccccccccccCCcEECCCC
Confidence            579999999763 33444 47999999999999999875 22211  0001 1222211    11122234456666666


Q ss_pred             EECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          332 KIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       332 ~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      +||++++|..++  .++ .++|.-+.+.+.........+.|++.++.
T Consensus        81 ~Ig~~~~i~~gv~Ig~~-~vIgags~V~~~v~~~~v~~G~Pa~~i~~  126 (145)
T cd03349          81 WIGHGATILPGVTIGDG-AVIAAGAVVTKDVPPYAIVGGNPAKVIRY  126 (145)
T ss_pred             EECCCCEEeCCCEECCC-CEECCCCEEccccCCCeEEEecCCEeehh
Confidence            666666665543  333 33444455555555555556788766654

Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.

>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional

Probab=98.34  E-value=1.5e-06  Score=88.97  Aligned_cols=71  Identities=17%  Similarity=0.332  Sum_probs=54.7

Q ss_pred             cCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCC
Q 047635          258 HPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGS  337 (388)
Q Consensus       258 g~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGags  337 (388)
                      .+++.||++|.|.   ++.|. +++||++|.|+.+|.|.         +++|+++|.||.+|+|. ++.|+++|.||+++
T Consensus       313 ~~~~~ig~~~~I~---~~~i~-~svIg~~~~I~~~~~i~---------~sii~~~~~i~~~~~i~-~~ii~~~~~i~~~~  378 (407)
T PRK00844        313 AQDSLVSAGSIIS---GATVR-NSVLSPNVVVESGAEVE---------DSVLMDGVRIGRGAVVR-RAILDKNVVVPPGA  378 (407)
T ss_pred             EEeCEEcCCCEEC---CeeeE-cCEECCCCEECCCCEEe---------eeEECCCCEECCCCEEE-eeEECCCCEECCCC
Confidence            3456667777664   45554 37777777777777775         36899999999999884 68999999999999


Q ss_pred             EECCC
Q 047635          338 VVLKD  342 (388)
Q Consensus       338 VV~~d  342 (388)
                      +|..+
T Consensus       379 ~i~~~  383 (407)
T PRK00844        379 TIGVD  383 (407)
T ss_pred             EECCC
Confidence            99876

>TIGR02091 glgC glucose-1-phosphate adenylyltransferase

Probab=98.33  E-value=3.2e-06  Score=84.60  Aligned_cols=77  Identities=22%  Similarity=0.323  Sum_probs=50.0

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECC----CcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCE
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGD----NVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAK  332 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGd----nV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~  332 (388)
                      +.+.+.|+.++.+.   +++||++|+||+    ++.|+.+|+|+.++.+.   +++|++++.||.++.| .+++||+++.
T Consensus       280 ~~~~~~i~~~~~i~---~~~ig~~~~I~~~~v~~s~i~~~~~I~~~~~i~---~sii~~~~~v~~~~~l-~~~ivg~~~~  352 (361)
T TIGR02091       280 LPPAKFVDSDAQVV---DSLVSEGCIISGATVSHSVLGIRVRIGSGSTVE---DSVIMGDVGIGRGAVI-RNAIIDKNVR  352 (361)
T ss_pred             CCCceEecCCCEEE---CCEECCCCEECCCEEEccEECCCCEECCCCEEe---eeEEeCCCEECCCCEE-eeeEECCCCE
Confidence            44455555554332   344555555555    55555555555544443   4788899999998887 5888888999


Q ss_pred             ECCCCEEC
Q 047635          333 IGAGSVVL  340 (388)
Q Consensus       333 IGagsVV~  340 (388)
                      |+++++|.
T Consensus       353 i~~~~~i~  360 (361)
T TIGR02091       353 IGEGVVIG  360 (361)
T ss_pred             ECCCCEeC
Confidence            88888764

This enzyme, glucose-1-phosphate adenylyltransferase, is also called ADP-glucose pyrophosphorylase. The plant form is an alpha2,beta2 heterodimer, allosterically regulated in plants. Both subunits are homologous and included in this model. In bacteria, both homomeric forms of GlgC and more active heterodimers of GlgC and GlgD have been described. This model describes the GlgC subunit only. This enzyme appears in variants of glycogen synthesis pathways that use ADP-glucose, rather than UDP-glucose as in animals.

>PF14602 Hexapep_2: Hexapeptide repeat of succinyl-transferase; PDB: 2P2O_B 2IC7_B 2RIJ_A 3FSY_B 3FSX_D 3CJ8_A 1QRE_A 1QRG_A 1THJ_B 1QRM_A

Probab=98.26  E-value=8.4e-07  Score=59.83  Aligned_cols=33  Identities=45%  Similarity=0.796  Sum_probs=24.3

Q ss_pred             CEECCCcEEccCCEECCCcEECCCCEECCCCEECC
Q 047635          307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK  341 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~  341 (388)
                      ++||++|+||+++.|  +++|||+|.|++|++|.+
T Consensus         2 v~IG~~~~ig~~~~i--gi~igd~~~i~~g~~I~~   34 (34)
T PF14602_consen    2 VTIGDNCFIGANSTI--GITIGDGVIIGAGVVITA   34 (34)
T ss_dssp             EEE-TTEEE-TT-EE--TSEE-TTEEE-TTEEEES
T ss_pred             eEECCCEEECccccc--CCEEcCCCEECCCCEEcC
Confidence            578999999999998  599999999999998864

...

>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional

Probab=98.23  E-value=5e-06  Score=83.90  Aligned_cols=51  Identities=24%  Similarity=0.323  Sum_probs=35.6

Q ss_pred             cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECC
Q 047635          281 AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK  341 (388)
Q Consensus       281 ~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~  341 (388)
                      ++||++|.|+.+|.|.         +++|+++|.||.++.|. +++||+++.||.++.+..
T Consensus       309 s~ig~~~~I~~~~~i~---------~svi~~~~~i~~~~~i~-~~ii~~~~~i~~~~~i~~  359 (380)
T PRK05293        309 SVLFQGVQVGEGSVVK---------DSVIMPGAKIGENVVIE-RAIIGENAVIGDGVIIGG  359 (380)
T ss_pred             eEEcCCCEECCCCEEE---------CCEEeCCCEECCCeEEe-EEEECCCCEECCCCEEcC
Confidence            3444444444444442         46899999999988874 588888888888877754

>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit

Probab=98.20  E-value=8.5e-06  Score=81.95  Aligned_cols=77  Identities=16%  Similarity=0.252  Sum_probs=46.2

Q ss_pred             CCcEECCceEEcCCCCcEECCCcEEC---CCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECC
Q 047635          259 PGAKIGRGLLFDHATGVVVGETAVIG---DNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGA  335 (388)
Q Consensus       259 ~~a~IG~gv~I~~gtgVvIG~~~~IG---dnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGa  335 (388)
                      +.+.||+++.|.   +++||++|+|+   .++.|+++|+|++++.+.   +++|+++|.|++++.+ .++.||+++.||+
T Consensus       277 ~p~~i~~~~~i~---~~~Ig~~~~i~~~v~~s~i~~~~~I~~~~~i~---~sii~~~~~I~~~~~i-~~~ii~~~~~v~~  349 (369)
T TIGR02092       277 PPTYYAENSKVE---NSLVANGCIIEGKVENSILSRGVHVGKDALIK---NCIIMQRTVIGEGAHL-ENVIIDKDVVIEP  349 (369)
T ss_pred             CCcEEcCCCEEE---EeEEcCCCEEeeEEeCCEECCCCEECCCCEEE---eeEEeCCCEECCCCEE-EEEEECCCCEECC
Confidence            445555555552   34455544444   223455555555444443   4678888888888876 4578888888888


Q ss_pred             CCEECCC
Q 047635          336 GSVVLKD  342 (388)
Q Consensus       336 gsVV~~d  342 (388)
                      ++.+..+
T Consensus       350 ~~~~~~~  356 (369)
T TIGR02092       350 NVKIAGT  356 (369)
T ss_pred             CCEeCCC
Confidence            8777443

This family is GlgD, an apparent regulatory protein that appears in an alpha2/beta2 heterotetramer with GlgC (glucose-1-phosphate adenylyltransferase, TIGR02091) in a subset of bacteria that use GlgC for glycogen biosynthesis.

>PLN02241 glucose-1-phosphate adenylyltransferase

Probab=98.20  E-value=4.3e-06  Score=86.47  Aligned_cols=39  Identities=28%  Similarity=0.360  Sum_probs=26.3

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGG  297 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg  297 (388)
                      +.|++++.|+ ++.|.   +.+||+++.||++|.|.+++.+|.
T Consensus       316 s~I~~~~~I~-~~~I~---~svI~~~~~Ig~~~~I~~sii~g~  354 (436)
T PLN02241        316 SIISHGCFLR-ECKIE---HSVVGLRSRIGEGVEIEDTVMMGA  354 (436)
T ss_pred             eEEcCCcEEc-CeEEE---eeEEcCCCEECCCCEEEEeEEECC
Confidence            4577777777 66664   357777777777777766666553

>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional

Probab=98.16  E-value=7.8e-06  Score=84.30  Aligned_cols=69  Identities=22%  Similarity=0.265  Sum_probs=54.7

Q ss_pred             CcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEE
Q 047635          260 GAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV  339 (388)
Q Consensus       260 ~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV  339 (388)
                      ++.||+||.| .  ++.|. +++||++|.|+.+|.|.         +++|+++|.||.++.| .++.||++|.|+++++|
T Consensus       327 ~s~i~~~~~i-~--~~~i~-~svi~~~~~I~~~~~i~---------~svi~~~~~I~~~~~i-~~~ii~~~~~i~~~~~i  392 (425)
T PRK00725        327 NSLVSGGCII-S--GAVVR-RSVLFSRVRVNSFSNVE---------DSVLLPDVNVGRSCRL-RRCVIDRGCVIPEGMVI  392 (425)
T ss_pred             eCEEcCCcEE-c--Ccccc-CCEECCCCEECCCCEEe---------eeEEcCCCEECCCCEE-eeEEECCCCEECCCCEE
Confidence            5677777777 4  56665 47788888888887775         4789999999999987 57889999999999888


Q ss_pred             CCC
Q 047635          340 LKD  342 (388)
Q Consensus       340 ~~d  342 (388)
                      ..+
T Consensus       393 ~~~  395 (425)
T PRK00725        393 GED  395 (425)
T ss_pred             CCC
Confidence            755

>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]

Probab=98.15  E-value=1.1e-05  Score=81.75  Aligned_cols=69  Identities=33%  Similarity=0.506  Sum_probs=44.9

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEEC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIG  334 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IG  334 (388)
                      +.|-..+.||+++.|+.  ++.||.+++||+||.|++++.|.         +.+|.++|.||.++.|. +..||++|.||
T Consensus       256 ~~i~gp~~ig~~~~i~~--~~~i~~~~~ig~~~~I~~~~~i~---------~Sii~~~~~i~~~~~i~-~sIi~~~~~ig  323 (358)
T COG1208         256 AYIIGPVVIGPGAKIGP--GALIGPYTVIGEGVTIGNGVEIK---------NSIIMDNVVIGHGSYIG-DSIIGENCKIG  323 (358)
T ss_pred             ceEeCCEEECCCCEECC--CCEECCCcEECCCCEECCCcEEE---------eeEEEcCCEECCCCEEe-eeEEcCCcEEC
Confidence            34555566666666655  56666666666666666666664         35777777777777764 56677777777


Q ss_pred             C
Q 047635          335 A  335 (388)
Q Consensus       335 a  335 (388)
                      +
T Consensus       324 ~  324 (358)
T COG1208         324 A  324 (358)
T ss_pred             C
Confidence            6

>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form

Probab=98.14  E-value=7.9e-06  Score=81.71  Aligned_cols=69  Identities=25%  Similarity=0.336  Sum_probs=45.1

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEEC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIG  334 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IG  334 (388)
                      ..+.+.+.||+++.| +  +++|+..+.||++|.|+ ++.|++        +++||++|.|+ ++.| .+++|+++|.|+
T Consensus       249 ~~i~~~~~i~~~~~i-~--~~~i~~~~~Ig~~~~I~-~~~i~~--------~~~Ig~~~~i~-~~~i-~~s~i~~~~~i~  314 (353)
T TIGR01208       249 SKIRGRVVVGEGAKI-V--NSVIRGPAVIGEDCIIE-NSYIGP--------YTSIGEGVVIR-DAEV-EHSIVLDESVIE  314 (353)
T ss_pred             CEEcCCEEECCCCEE-e--CCEEECCcEECCCCEEc-CcEECC--------CCEECCCCEEe-eeEE-EeeEEcCCCEEc
Confidence            455666777777777 3  45565666677777665 344543        56777777776 5555 477888888887


Q ss_pred             CCC
Q 047635          335 AGS  337 (388)
Q Consensus       335 ags  337 (388)
                      .++
T Consensus       315 ~~~  317 (353)
T TIGR01208       315 GVQ  317 (353)
T ss_pred             CCc
Confidence            763

Alternate name: dTDP-D-glucose synthase

>KOG4042 consensus Dynactin subunit p27/WS-3, involved in transport of organelles along microtubules [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton]

Probab=98.13  E-value=3.5e-06  Score=74.76  Aligned_cols=102  Identities=20%  Similarity=0.362  Sum_probs=74.0

Q ss_pred             eeeeEecCCcEECCceEEcC-CCCcEECCCcEECCCcEEcC----C---------CEECCCCccC-C--CCCCEECCCcE
Q 047635          252 VFSVDIHPGAKIGRGLLFDH-ATGVVVGETAVIGDNVSILH----N---------VTLGGTGKMS-G--DRHPKIGNGVL  314 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~-gtgVvIG~~~~IGdnV~Ig~----g---------vtIgg~~~i~-g--~~~~~IGd~V~  314 (388)
                      ...+.|++++.+.+.+.+.. ...++||+++.|++...|.+    |         -.||...... +  ..--++||+.+
T Consensus        24 rGdvti~~gcVvHP~a~~iA~aGPI~iGEnniiEEyA~i~n~~~~~~~~d~~~~pmiIGt~NvFeVgc~s~A~kvGd~NV  103 (190)
T KOG4042|consen   24 RGDVTIKEGCVVHPFAVFIATAGPIYIGENNIIEEYAVIRNRLEPGAVWDSDGQPMIIGTWNVFEVGCKSSAKKVGDRNV  103 (190)
T ss_pred             ccceEecCCcEecceEEEEcccCCEEEccCchhhhHHHHHhhcCCCCccCCCCCeEEEeccceEEeechhhhhhhcCcce
Confidence            34566677777766665544 33689999998888887754    1         2344322111 1  11248999999


Q ss_pred             EccCCEECCCcEECCCCEECCCCEEC--CCCCCCcEEEecC
Q 047635          315 VGAGTCILGNIKIGDGAKIGAGSVVL--KDVPPRTTAVGNP  353 (388)
Q Consensus       315 IGaga~Ilg~V~IGd~v~IGagsVV~--~dVp~~s~VvG~P  353 (388)
                      |+..|.++.||.+-+||.|||++.|.  +.+|+++++.|.-
T Consensus       104 ieskayvg~gv~vssgC~vGA~c~v~~~q~lpent~vYga~  144 (190)
T KOG4042|consen  104 IESKAYVGDGVSVSSGCSVGAKCTVFSHQNLPENTSVYGAT  144 (190)
T ss_pred             EeeeeEecCCcEEcCCceeccceEEecccccCCcceEEccc
Confidence            99999999999999999999999997  4589999999853

>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional

Probab=98.09  E-value=8.7e-06  Score=82.11  Aligned_cols=32  Identities=38%  Similarity=0.539  Sum_probs=14.4

Q ss_pred             CEECCCcEEccCCEECCCcEECCCCEECCCCEE
Q 047635          307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV  339 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV  339 (388)
                      ++||++|.||++|.|. +++|+++|.||.++.|
T Consensus       309 s~ig~~~~I~~~~~i~-~svi~~~~~i~~~~~i  340 (380)
T PRK05293        309 SVLFQGVQVGEGSVVK-DSVIMPGAKIGENVVI  340 (380)
T ss_pred             eEEcCCCEECCCCEEE-CCEEeCCCEECCCeEE
Confidence            4455555555544432 3344444444444433

>PF00132 Hexapep: Bacterial transferase hexapeptide (six repeats); InterPro: IPR001451 A variety of bacterial transferases contain a repeat structure composed of tandem repeats of a [LIV]-G-X(4) hexapeptide, which, in the tertiary structure of LpxA (UDP N-acetylglucosamine acyltransferase) [], has been shown to form a left-handed parallel beta helix

Probab=98.09  E-value=1.8e-06  Score=58.12  Aligned_cols=35  Identities=37%  Similarity=0.659  Sum_probs=29.3

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEEC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVL  340 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~  340 (388)
                      +++||++|+|++++.|.++++||++|.|+++++|.
T Consensus         1 ~~~Ig~~~~i~~~~~i~~~~~Ig~~~~I~~~~~I~   35 (36)
T PF00132_consen    1 NVVIGDNVIIGPNAVIGGGVVIGDNCVIGPGVVIG   35 (36)
T ss_dssp             TEEEETTEEEETTEEEETTEEE-TTEEEETTEEEE
T ss_pred             CCEEcCCCEECCCcEecCCCEECCCCEEcCCCEEC
Confidence            36889999999999999999999999999988875

A number of different transferase protein families contain this repeat, such as galactoside acetyltransferase-like proteins [], the gamma-class of carbonic anhydrases [], and tetrahydrodipicolinate-N-succinlytransferases (DapD), the latter containing an extra N-terminal 3-helical domain [].; PDB: 3DK5_A 3F1X_A 2JF2_A 1LXA_A 2AQ9_A 2QIV_X 2QIA_A 2JF3_A 1T3D_C 3R8Y_F ....

>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]

Probab=98.08  E-value=9.9e-06  Score=81.97  Aligned_cols=82  Identities=39%  Similarity=0.575  Sum_probs=60.0

Q ss_pred             cceeeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcE-----EcCCCEECCCCccCCCCCCEECCCcEEccCCEECC
Q 047635          249 VSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVS-----ILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       249 ~~~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~-----Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg  323 (388)
                      ......+.||+++.||.++.|..  +++||++|.||+++.     |+.+|.|+....+.   +.+||++|.||++. .  
T Consensus       256 ~~i~gp~~ig~~~~i~~~~~i~~--~~~ig~~~~I~~~~~i~~Sii~~~~~i~~~~~i~---~sIi~~~~~ig~~~-~--  327 (358)
T COG1208         256 AYIIGPVVIGPGAKIGPGALIGP--YTVIGEGVTIGNGVEIKNSIIMDNVVIGHGSYIG---DSIIGENCKIGASL-I--  327 (358)
T ss_pred             ceEeCCEEECCCCEECCCCEECC--CcEECCCCEECCCcEEEeeEEEcCCEECCCCEEe---eeEEcCCcEECCce-e--
Confidence            44567788999999999999987  889999998888865     45666666655554   46889999988832 2  


Q ss_pred             CcEECCCCEECCCCEECCC
Q 047635          324 NIKIGDGAKIGAGSVVLKD  342 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~d  342 (388)
                         ||+ +.+|.++.+.++
T Consensus       328 ---i~d-~~~g~~~~i~~g  342 (358)
T COG1208         328 ---IGD-VVIGINSEILPG  342 (358)
T ss_pred             ---ecc-eEecCceEEcCc
Confidence               566 666666555554

>PLN02241 glucose-1-phosphate adenylyltransferase

Probab=98.08  E-value=9.4e-06  Score=83.92  Aligned_cols=36  Identities=19%  Similarity=0.235  Sum_probs=28.1

Q ss_pred             cEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCc
Q 047635          261 AKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGK  300 (388)
Q Consensus       261 a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~  300 (388)
                      +.|+++|.|.   +++|+ +++||++|.|+.+|.|.....
T Consensus       316 s~I~~~~~I~---~~~I~-~svI~~~~~Ig~~~~I~~sii  351 (436)
T PLN02241        316 SIISHGCFLR---ECKIE-HSVVGLRSRIGEGVEIEDTVM  351 (436)
T ss_pred             eEEcCCcEEc---CeEEE-eeEEcCCCEECCCCEEEEeEE
Confidence            6778888775   56775 579999999999999986433

>KOG1462 consensus Translation initiation factor 2B, gamma subunit (eIF-2Bgamma/GCD1) [Translation, ribosomal structure and biogenesis]

Probab=98.06  E-value=8.7e-06  Score=81.97  Aligned_cols=68  Identities=32%  Similarity=0.461  Sum_probs=37.5

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEEC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIG  334 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IG  334 (388)
                      ..++++++||+++.|..         ++||+||.||..|+|.+         ..|-+||.||.|+.| +|+.||.|+.||
T Consensus       335 ~iv~~~t~i~~~s~ik~---------SviG~nC~Ig~~~~v~n---------Silm~nV~vg~G~~I-ensIIg~gA~Ig  395 (433)
T KOG1462|consen  335 SIVGDNTQIGENSNIKR---------SVIGSNCDIGERVKVAN---------SILMDNVVVGDGVNI-ENSIIGMGAQIG  395 (433)
T ss_pred             hccCCCceecccceeee---------eeecCCccccCCcEEEe---------eEeecCcEecCCcce-ecceecccceec
Confidence            44566666665555542         44555555555555532         455566666666654 356666666666


Q ss_pred             CCCEECC
Q 047635          335 AGSVVLK  341 (388)
Q Consensus       335 agsVV~~  341 (388)
                      +||.+..
T Consensus       396 ~gs~L~n  402 (433)
T KOG1462|consen  396 SGSKLKN  402 (433)
T ss_pred             CCCeeee
Confidence            6665543

>cd04651 LbH_G1P_AT_C Glucose-1-phosphate adenylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Glucose-1-phosphate adenylyltransferase is also known as ADP-glucose synthase or ADP-glucose pyrophosphorylase

Probab=97.98  E-value=4.2e-05  Score=63.77  Aligned_cols=66  Identities=21%  Similarity=0.305  Sum_probs=32.0

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCC
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAG  336 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGag  336 (388)
                      ||+++.|+ ++.|.   ..+|++++.||+++.|. ++.|+.        ++.||+++.| .++.|..++.||+++.|+..
T Consensus        15 Ig~~~~I~-~~~I~---~svi~~~~~Ig~~~~I~-~siI~~--------~~~Ig~~~~i-~~siig~~~~Ig~~~~v~~~   80 (104)
T cd04651          15 VSEGCIIS-GGTVE---NSVLFRGVRVGSGSVVE-DSVIMP--------NVGIGRNAVI-RRAIIDKNVVIPDGVVIGGD   80 (104)
T ss_pred             ECCCCEEc-CeEEE---eCEEeCCCEECCCCEEE-EeEEcC--------CCEECCCCEE-EeEEECCCCEECCCCEECCC
Confidence            44444444 44443   24455555555555553 334433        3455555555 34555555555555555554

It catalyzes the first committed and rate-limiting step in starch biosynthesis in plants and glycogen biosynthesis in bacteria. It is the enzymatic site for regulation of storage polysaccharide accumulation in plants and bacteria. The enzyme is a homotetramer, with each subunit containing an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain with at 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). The LbH domain is involved in cooperative allosteric regulation and oligomerization.

>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]

Probab=97.90  E-value=2.1e-05  Score=80.32  Aligned_cols=88  Identities=24%  Similarity=0.322  Sum_probs=51.4

Q ss_pred             eeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEEC-----CCCccCC---CCCCEECCCcEEccCCEECC
Q 047635          252 VFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLG-----GTGKMSG---DRHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIg-----g~~~i~g---~~~~~IGd~V~IGaga~Ilg  323 (388)
                      ...++|...++||.++.|+.  +++|...++||++|.||++|.|-     ++..+..   -...+||++|.||+-+.+.+
T Consensus       260 P~t~~i~~dv~ig~DvvI~p--~v~l~G~t~ig~~v~iGpg~~i~ds~I~~~a~I~~~S~ie~s~vg~~~~VGPfA~LRP  337 (460)
T COG1207         260 PATTYIRGDVEIGRDVVIEP--NVILEGNTVIGDNVVIGPGSVIKDSVIGDNAVIKAYSVIEGSTVGEGATVGPFARLRP  337 (460)
T ss_pred             CCeEEEcCcEEECCceEEec--CcEEeeeEEECCceEECCCcEEEeeEEcCCCEEEecceeeccEecCCcccCCccccCC
Confidence            44566777777777777776  56666666666666666664442     2222111   01346666666666666666


Q ss_pred             CcEECCCCEECCCCEECC
Q 047635          324 NIKIGDGAKIGAGSVVLK  341 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~  341 (388)
                      +..+|+++.||.-+-+.+
T Consensus       338 g~~L~~~~hIGNFVEvK~  355 (460)
T COG1207         338 GAVLGADVHIGNFVEVKK  355 (460)
T ss_pred             cCcccCCCeEeeeEEEec
Confidence            666666666666655554

>PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional

Probab=97.90  E-value=2.9e-05  Score=80.20  Aligned_cols=32  Identities=19%  Similarity=0.307  Sum_probs=16.9

Q ss_pred             cEECCceEEcCCCCcEECCCcEECCCcEEcCCCEEC
Q 047635          261 AKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLG  296 (388)
Q Consensus       261 a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIg  296 (388)
                      +.||++|.| .  ++.|+ +++||++|.|+.+|.|-
T Consensus       309 ~~ig~~~~i-~--~~~i~-~svi~~~~~Ig~~~~i~  340 (429)
T PRK02862        309 SIIAEGCII-K--NCSIH-HSVLGIRSRIESGCTIE  340 (429)
T ss_pred             CEECCCCEE-C--CcEEE-EEEEeCCcEECCCCEEE
Confidence            455666655 3  44443 25555555555555553

>KOG1462 consensus Translation initiation factor 2B, gamma subunit (eIF-2Bgamma/GCD1) [Translation, ribosomal structure and biogenesis]

Probab=97.84  E-value=2.8e-05  Score=78.41  Aligned_cols=16  Identities=13%  Similarity=-0.012  Sum_probs=7.3

Q ss_pred             hHHHHHHHHHHhhhcH
Q 047635          173 SGTLFELFMGVIVEDQ  188 (388)
Q Consensus       173 ~~~l~~~~~~~l~~~p  188 (388)
                      ++.+..++...++..|
T Consensus       237 ~~f~P~lvkkQ~q~~~  252 (433)
T KOG1462|consen  237 ADFLPYLVKKQFQKNP  252 (433)
T ss_pred             ccccchhhhhhhhcCC
Confidence            3344445554444443

>KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]

Probab=97.81  E-value=0.0001  Score=72.39  Aligned_cols=60  Identities=30%  Similarity=0.291  Sum_probs=31.0

Q ss_pred             cEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCE
Q 047635          275 VVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSV  338 (388)
Q Consensus       275 VvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsV  338 (388)
                      +.+..++.||+||+||.+++||.+..+.   .++|=++|.|..|++|+ +..||-++.||-=+-
T Consensus       295 akvhptAkiGPNVSIga~vrvg~GvRl~---~sIIl~d~ei~enavVl-~sIigw~s~iGrWaR  354 (407)
T KOG1460|consen  295 AKVHPTAKIGPNVSIGANVRVGPGVRLR---ESIILDDAEIEENAVVL-HSIIGWKSSIGRWAR  354 (407)
T ss_pred             ceeCCccccCCCceecCCceecCCceee---eeeeccCcEeeccceEE-eeeecccccccceee
Confidence            3333334444444444444443332222   35777777777777776 455666666664333

>PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional

Probab=97.80  E-value=5.5e-05  Score=78.17  Aligned_cols=78  Identities=23%  Similarity=0.282  Sum_probs=44.2

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccC----------CCCCCEECCCcEEccCCEECC
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMS----------GDRHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~----------g~~~~~IGd~V~IGaga~Ilg  323 (388)
                      ++.||+++.| +++.|.   +.+||.+|.||++|.|-..+..++....+          +..++.||++|.| .+++|..
T Consensus       308 ~~~ig~~~~i-~~~~i~---~svi~~~~~Ig~~~~i~~svi~~~~~~p~~~~~~~~~~~~~~~~~Ig~~~~i-~~~ii~~  382 (429)
T PRK02862        308 ESIIAEGCII-KNCSIH---HSVLGIRSRIESGCTIEDTLVMGADFYESSEEREELRKEGKPPLGIGEGTTI-KRAIIDK  382 (429)
T ss_pred             eCEECCCCEE-CCcEEE---EEEEeCCcEECCCCEEEeeEEecCcccccccccccccccCCcccEECCCCEE-EEEEECC
Confidence            3567888877 677775   35777778888877775555544211000          1113455555555 3455555


Q ss_pred             CcEECCCCEECCC
Q 047635          324 NIKIGDGAKIGAG  336 (388)
Q Consensus       324 ~V~IGd~v~IGag  336 (388)
                      ++.||++|.|..+
T Consensus       383 ~~~i~~~~~~~~~  395 (429)
T PRK02862        383 NARIGNNVRIVNK  395 (429)
T ss_pred             CcEECCCcEEecC
Confidence            5555555555433

>KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=97.80  E-value=3.3e-05  Score=76.60  Aligned_cols=87  Identities=23%  Similarity=0.212  Sum_probs=55.7

Q ss_pred             eeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCC--CCCCEECCCcEEccCCEECCCcEECC
Q 047635          252 VFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSG--DRHPKIGNGVLVGAGTCILGNIKIGD  329 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g--~~~~~IGd~V~IGaga~Ilg~V~IGd  329 (388)
                      ...+.+.+.+.||++|.|++  +++||.+++|+++|.|-+.+.+++.-....  -+...+|-++.||.++.|-++++||+
T Consensus       262 ~~nvlvd~~~~iG~~C~Ig~--~vvIG~r~~i~~gV~l~~s~il~~~~~~~~s~i~s~ivg~~~~IG~~~~id~~a~lG~  339 (371)
T KOG1322|consen  262 VGNVLVDSIASIGENCSIGP--NVVIGPRVRIEDGVRLQDSTILGADYYETHSEISSSIVGWNVPIGIWARIDKNAVLGK  339 (371)
T ss_pred             cccEeeccccccCCccEECC--CceECCCcEecCceEEEeeEEEccceechhHHHHhhhccccccccCceEEecccEecc
Confidence            34566778888888888877  788888888888877766555554221111  12345666667777776666666666


Q ss_pred             CCEECCCCEEC
Q 047635          330 GAKIGAGSVVL  340 (388)
Q Consensus       330 ~v~IGagsVV~  340 (388)
                      +++|...-.|.
T Consensus       340 nV~V~d~~~vn  350 (371)
T KOG1322|consen  340 NVIVADEDYVN  350 (371)
T ss_pred             ceEEecccccc
Confidence            66665554443

>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional

Probab=97.80  E-value=6.4e-05  Score=77.58  Aligned_cols=33  Identities=9%  Similarity=0.040  Sum_probs=16.3

Q ss_pred             CEECCCcEEccCCEECCCcEECCCCEECCCCEEC
Q 047635          307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVL  340 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~  340 (388)
                      ++||++|.||.+|.| .+++|+++|.||.++.|.
T Consensus       344 svi~~~~~I~~~~~i-~~svi~~~~~I~~~~~i~  376 (425)
T PRK00725        344 SVLFSRVRVNSFSNV-EDSVLLPDVNVGRSCRLR  376 (425)
T ss_pred             CEECCCCEECCCCEE-eeeEEcCCCEECCCCEEe
Confidence            455555555555554 244444444444444443

>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional

Probab=97.78  E-value=6.3e-05  Score=77.08  Aligned_cols=71  Identities=20%  Similarity=0.299  Sum_probs=44.9

Q ss_pred             ECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEE
Q 047635          277 VGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARL  356 (388)
Q Consensus       277 IG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArv  356 (388)
                      +..++.||++|.|+ +++|.         +++||++|.||.||.|. ++.|+++|.||++++|...|-.....+|..+++
T Consensus       312 ~~~~~~ig~~~~I~-~~~i~---------~svIg~~~~I~~~~~i~-~sii~~~~~i~~~~~i~~~ii~~~~~i~~~~~i  380 (407)
T PRK00844        312 SAQDSLVSAGSIIS-GATVR---------NSVLSPNVVVESGAEVE-DSVLMDGVRIGRGAVVRRAILDKNVVVPPGATI  380 (407)
T ss_pred             eEEeCEEcCCCEEC-CeeeE---------cCEECCCCEECCCCEEe-eeEECCCCEECCCCEEEeeEECCCCEECCCCEE
Confidence            34446666666665 66664         36778888888888775 566777888887777766543333344555544


Q ss_pred             ec
Q 047635          357 IG  358 (388)
Q Consensus       357 i~  358 (388)
                      .+
T Consensus       381 ~~  382 (407)
T PRK00844        381 GV  382 (407)
T ss_pred             CC
Confidence            43

>TIGR02091 glgC glucose-1-phosphate adenylyltransferase

Probab=97.68  E-value=0.00015  Score=72.49  Aligned_cols=35  Identities=29%  Similarity=0.490  Sum_probs=23.1

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK  341 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~  341 (388)
                      +++||++|.||.+|+|. ++.|++++.||.++.|..
T Consensus       310 ~s~i~~~~~I~~~~~i~-~sii~~~~~v~~~~~l~~  344 (361)
T TIGR02091       310 HSVLGIRVRIGSGSTVE-DSVIMGDVGIGRGAVIRN  344 (361)
T ss_pred             ccEECCCCEECCCCEEe-eeEEeCCCEECCCCEEee
Confidence            35677777777777664 566666777766666643

This enzyme, glucose-1-phosphate adenylyltransferase, is also called ADP-glucose pyrophosphorylase. The plant form is an alpha2,beta2 heterodimer, allosterically regulated in plants. Both subunits are homologous and included in this model. In bacteria, both homomeric forms of GlgC and more active heterodimers of GlgC and GlgD have been described. This model describes the GlgC subunit only. This enzyme appears in variants of glycogen synthesis pathways that use ADP-glucose, rather than UDP-glucose as in animals.

>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit

Probab=97.61  E-value=0.00013  Score=73.48  Aligned_cols=77  Identities=18%  Similarity=0.292  Sum_probs=48.7

Q ss_pred             CcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecC
Q 047635          274 GVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNP  353 (388)
Q Consensus       274 gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~P  353 (388)
                      .+.||+++.| .++.|+.||+|++  .+   .+++||++|.||.||.| .++.|+++|.|++++.+...|-....++|.-
T Consensus       278 p~~i~~~~~i-~~~~Ig~~~~i~~--~v---~~s~i~~~~~I~~~~~i-~~sii~~~~~I~~~~~i~~~ii~~~~~v~~~  350 (369)
T TIGR02092       278 PTYYAENSKV-ENSLVANGCIIEG--KV---ENSILSRGVHVGKDALI-KNCIIMQRTVIGEGAHLENVIIDKDVVIEPN  350 (369)
T ss_pred             CcEEcCCCEE-EEeEEcCCCEEee--EE---eCCEECCCCEECCCCEE-EeeEEeCCCEECCCCEEEEEEECCCCEECCC
Confidence            4555555555 4556666666642  12   24689999999999987 4677888888888877766543333344544


Q ss_pred             cEEe
Q 047635          354 ARLI  357 (388)
Q Consensus       354 Arvi  357 (388)
                      +++.
T Consensus       351 ~~~~  354 (369)
T TIGR02092       351 VKIA  354 (369)
T ss_pred             CEeC
Confidence            4443

This family is GlgD, an apparent regulatory protein that appears in an alpha2/beta2 heterotetramer with GlgC (glucose-1-phosphate adenylyltransferase, TIGR02091) in a subset of bacteria that use GlgC for glycogen biosynthesis.

>PF00132 Hexapep: Bacterial transferase hexapeptide (six repeats); InterPro: IPR001451 A variety of bacterial transferases contain a repeat structure composed of tandem repeats of a [LIV]-G-X(4) hexapeptide, which, in the tertiary structure of LpxA (UDP N-acetylglucosamine acyltransferase) [], has been shown to form a left-handed parallel beta helix

Probab=97.58  E-value=4.2e-05  Score=51.31  Aligned_cols=15  Identities=33%  Similarity=0.713  Sum_probs=6.8

Q ss_pred             CEECCCcEEccCCEE
Q 047635          307 PKIGNGVLVGAGTCI  321 (388)
Q Consensus       307 ~~IGd~V~IGaga~I  321 (388)
                      ++||+++.|+++++|
T Consensus        20 ~~Ig~~~~I~~~~~I   34 (36)
T PF00132_consen   20 VVIGDNCVIGPGVVI   34 (36)
T ss_dssp             EEE-TTEEEETTEEE
T ss_pred             CEECCCCEEcCCCEE
Confidence            444455555555444

A number of different transferase protein families contain this repeat, such as galactoside acetyltransferase-like proteins [], the gamma-class of carbonic anhydrases [], and tetrahydrodipicolinate-N-succinlytransferases (DapD), the latter containing an extra N-terminal 3-helical domain [].; PDB: 3DK5_A 3F1X_A 2JF2_A 1LXA_A 2AQ9_A 2QIV_X 2QIA_A 2JF3_A 1T3D_C 3R8Y_F ....

>KOG3121 consensus Dynactin, subunit p25 [Cytoskeleton]

Probab=97.57  E-value=0.00015  Score=64.12  Aligned_cols=77  Identities=25%  Similarity=0.388  Sum_probs=43.3

Q ss_pred             cEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEE-----CCCcEECCCCEECCCC------EECCC--C
Q 047635          281 AVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCI-----LGNIKIGDGAKIGAGS------VVLKD--V  343 (388)
Q Consensus       281 ~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~I-----lg~V~IGd~v~IGags------VV~~d--V  343 (388)
                      +.||..|.++.++.|...-++-..    ....|||+|+|+.+|+|     ..-|.+|.+++||-++      .|..|  +
T Consensus        55 Vr~GryCV~ksrsvIRPp~K~FSKg~affp~hiGdhVFieE~cVVnAAqIgsyVh~GknaviGrrCVlkdCc~ild~tVl  134 (184)
T KOG3121|consen   55 VRIGRYCVLKSRSVIRPPMKIFSKGPAFFPVHIGDHVFIEEECVVNAAQIGSYVHLGKNAVIGRRCVLKDCCRILDDTVL  134 (184)
T ss_pred             ceEcceEEeccccccCCchHHhcCCceeeeeeecceEEEecceEeehhhheeeeEeccceeEcCceEhhhheeccCCccc
Confidence            456666666666666543332221    24689999999988876     2234455555555544      44444  3


Q ss_pred             CCCcEEEecCcEEecc
Q 047635          344 PPRTTAVGNPARLIGG  359 (388)
Q Consensus       344 p~~s~VvG~PArvi~~  359 (388)
                      |+.+++  .|-..++.
T Consensus       135 Ppet~v--ppy~~~~g  148 (184)
T KOG3121|consen  135 PPETLV--PPYSTIGG  148 (184)
T ss_pred             Cccccc--CCceEEcC
Confidence            666554  34555543

>KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=97.52  E-value=9.3e-05  Score=73.44  Aligned_cols=85  Identities=26%  Similarity=0.305  Sum_probs=54.1

Q ss_pred             EecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCC---CCCEECCCcEEccCCEECCCcEECCCCE
Q 047635          256 DIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGD---RHPKIGNGVLVGAGTCILGNIKIGDGAK  332 (388)
Q Consensus       256 ~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~---~~~~IGd~V~IGaga~Ilg~V~IGd~v~  332 (388)
                      ..-+++.|-.++.++.  -+.+|++|.||.|+.||.+|+|+++..+...   +...++++++| +.+.+.++++||.+++
T Consensus       254 r~~p~~~i~~nvlvd~--~~~iG~~C~Ig~~vvIG~r~~i~~gV~l~~s~il~~~~~~~~s~i-~s~ivg~~~~IG~~~~  330 (371)
T KOG1322|consen  254 RLLPGSKIVGNVLVDS--IASIGENCSIGPNVVIGPRVRIEDGVRLQDSTILGADYYETHSEI-SSSIVGWNVPIGIWAR  330 (371)
T ss_pred             cccCCccccccEeecc--ccccCCccEECCCceECCCcEecCceEEEeeEEEccceechhHHH-HhhhccccccccCceE
Confidence            3455678888888877  6777778888888877777777764433321   12244444443 2234466777777777


Q ss_pred             ECCCCEECCCC
Q 047635          333 IGAGSVVLKDV  343 (388)
Q Consensus       333 IGagsVV~~dV  343 (388)
                      |..++++.+||
T Consensus       331 id~~a~lG~nV  341 (371)
T KOG1322|consen  331 IDKNAVLGKNV  341 (371)
T ss_pred             EecccEeccce
Confidence            77777777664

>PF14602 Hexapep_2: Hexapeptide repeat of succinyl-transferase; PDB: 2P2O_B 2IC7_B 2RIJ_A 3FSY_B 3FSX_D 3CJ8_A 1QRE_A 1QRG_A 1THJ_B 1QRM_A

Probab=97.44  E-value=0.00016  Score=48.66  Aligned_cols=31  Identities=52%  Similarity=0.799  Sum_probs=15.8

Q ss_pred             EECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEEC
Q 047635          282 VIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCIL  322 (388)
Q Consensus       282 ~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Il  322 (388)
                      .||+||.|+.+++||          +.|||+|.|++|++|.
T Consensus         3 ~IG~~~~ig~~~~ig----------i~igd~~~i~~g~~I~   33 (34)
T PF14602_consen    3 TIGDNCFIGANSTIG----------ITIGDGVIIGAGVVIT   33 (34)
T ss_dssp             EE-TTEEE-TT-EET----------SEE-TTEEE-TTEEEE
T ss_pred             EECCCEEECcccccC----------CEEcCCCEECCCCEEc
Confidence            455555555555552          4677777777777663

...

>KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]

Probab=97.25  E-value=0.00049  Score=67.69  Aligned_cols=87  Identities=22%  Similarity=0.319  Sum_probs=52.7

Q ss_pred             eeeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEE-----cCCCEECCCCccCCCCCCEECCCcEEccCCEECCC-
Q 047635          251 EVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSI-----LHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGN-  324 (388)
Q Consensus       251 ~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~I-----g~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~-  324 (388)
                      ....|.|||+|++.+.+.|+.  +|.||.+++||++|.|     .++|.|..+..+.   |++||-++.||.=+.|.+. 
T Consensus       285 IigdVyIhPsakvhptAkiGP--NVSIga~vrvg~GvRl~~sIIl~d~ei~enavVl---~sIigw~s~iGrWaRVe~~p  359 (407)
T KOG1460|consen  285 IIGDVYIHPSAKVHPTAKIGP--NVSIGANVRVGPGVRLRESIILDDAEIEENAVVL---HSIIGWKSSIGRWARVEGIP  359 (407)
T ss_pred             EEeeeEEcCcceeCCccccCC--CceecCCceecCCceeeeeeeccCcEeeccceEE---eeeecccccccceeeecccc
Confidence            345677777777777777766  7777777777776654     4455554443332   4567777777655554321 


Q ss_pred             ------------cEECCCCEECCCCEECCC
Q 047635          325 ------------IKIGDGAKIGAGSVVLKD  342 (388)
Q Consensus       325 ------------V~IGd~v~IGagsVV~~d  342 (388)
                                  ++.|+.|.++..++|...
T Consensus       360 v~~s~~~~~~a~Tilga~v~v~dev~v~~s  389 (407)
T KOG1460|consen  360 VEPSPNLPFAALTILGADVSVEDEVIVLNS  389 (407)
T ss_pred             cccCCCCCcceeEEecccceecceeEEeee
Confidence                        345566666666666554

>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism]

Probab=96.99  E-value=0.0025  Score=64.96  Aligned_cols=66  Identities=26%  Similarity=0.358  Sum_probs=37.1

Q ss_pred             EECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECC
Q 047635          262 KIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK  341 (388)
Q Consensus       262 ~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~  341 (388)
                      -|+.||+|.   | .| .+++|+.+|.|+.+++|.+         ++|=.+|.||.||+|. ++.|.++|.|+.|.+|..
T Consensus       298 Lv~~GciI~---G-~V-~nSVL~~~v~I~~gs~i~~---------svim~~~~IG~~~~l~-~aIIDk~v~I~~g~~i~~  362 (393)
T COG0448         298 LVAGGCIIS---G-TV-ENSVLFRGVRIGKGSVIEN---------SVIMPDVEIGEGAVLR-RAIIDKNVVIGEGVVIGG  362 (393)
T ss_pred             eeeCCeEEE---e-EE-EeeEEecCeEECCCCEEEe---------eEEeCCcEECCCCEEE-EEEeCCCcEeCCCcEEcC
Confidence            355555554   2 22 2356666666666666643         4566666666666643 556666666666655554


Q ss_pred             C
Q 047635          342 D  342 (388)
Q Consensus       342 d  342 (388)
                      +
T Consensus       363 ~  363 (393)
T COG0448         363 D  363 (393)
T ss_pred             C
Confidence            4

>PF06426 SATase_N: Serine acetyltransferase, N-terminal ; InterPro: IPR010493 The N-terminal domain of serine acetyltransferase has a sequence that is conserved in plants [] and bacteria []

Probab=96.40  E-value=0.00042  Score=58.42  Aligned_cols=55  Identities=22%  Similarity=0.253  Sum_probs=43.4

Q ss_pred             cccccccccccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHH
Q 047635          104 QAIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALA  159 (388)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la  159 (388)
                      +....++.+.++....+.|++.++.|+++..++||++.++++ ++|.++||++..+
T Consensus        51 ~~~~l~~~~~~~~~~~p~i~~~~~~Dl~Av~~RDPA~~~~~~-~lL~~kGF~AlQa  105 (105)
T PF06426_consen   51 SADQLRDLFRDALEADPEIVEAARADLQAVYERDPACPSYLE-PLLFFKGFHALQA  105 (105)
T ss_dssp             -HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSTT--STHH-HHHH-HHHHHHHH
T ss_pred             CHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhCCccccchhH-HHHHCccHHHhcC
Confidence            333455667777788889999999999999999999999987 8999999998764

; GO: 0009001 serine O-acetyltransferase activity, 0006535 cysteine biosynthetic process from serine, 0005737 cytoplasm; PDB: 1T3D_C 3MC4_B 3P47_A 3P1B_A 3Q1X_A 1SSM_A 1S80_C 1SSQ_D 1SST_A 3GVD_L ....

>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism]

Probab=96.23  E-value=0.011  Score=60.32  Aligned_cols=21  Identities=19%  Similarity=0.224  Sum_probs=11.3

Q ss_pred             eccchhHH----HHHHHHHHHHHHh
Q 047635          216 LNFKGFLA----CQAHRIAHRLWLQ  236 (388)
Q Consensus       216 l~~~gf~a----l~~~Ria~~l~~~  236 (388)
                      +-|.|||.    +..|--++.....
T Consensus       238 Y~f~gYw~dVgTi~syy~aNmdLl~  262 (393)
T COG0448         238 YEFSGYWRDVGTIDSYYEANMDLLS  262 (393)
T ss_pred             EeccchhhhcccHHHHHHhhHHhcC
Confidence            34566764    4555555555544

>COG4801 Predicted acyltransferase [General function prediction only]

Probab=96.20  E-value=0.013  Score=55.88  Aligned_cols=14  Identities=14%  Similarity=0.408  Sum_probs=6.7

Q ss_pred             ecCCcEECCceEEc
Q 047635          257 IHPGAKIGRGLLFD  270 (388)
Q Consensus       257 Ig~~a~IG~gv~I~  270 (388)
                      ....+.||++..+.
T Consensus        19 v~gdViIG~nS~l~   32 (277)
T COG4801          19 VKGDVIIGKNSMLK   32 (277)
T ss_pred             EeccEEEcccceee
Confidence            33444555555554

>COG4801 Predicted acyltransferase [General function prediction only]

Probab=95.93  E-value=0.011  Score=56.42  Aligned_cols=30  Identities=23%  Similarity=0.420  Sum_probs=14.7

Q ss_pred             CEECCCcEEccCCEECCCcEECCCCEECCC
Q 047635          307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAG  336 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~V~IGd~v~IGag  336 (388)
                      ..||+++.|+...++.++-.||+++.|..|
T Consensus        75 ayiGE~~sI~gkl~v~gdLdig~dV~Iegg  104 (277)
T COG4801          75 AYIGEFSSIKGKLTVIGDLDIGADVIIEGG  104 (277)
T ss_pred             eEEeccceeeeeEEEecccccccceEEecC
Confidence            444444444444444555555555555433

>KOG4042 consensus Dynactin subunit p27/WS-3, involved in transport of organelles along microtubules [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton]

Probab=92.71  E-value=0.084  Score=47.38  Aligned_cols=42  Identities=24%  Similarity=0.309  Sum_probs=18.2

Q ss_pred             EECCCcEEccCCEE---CCCcEECCCCEECCCCEECCCCCCCcEE
Q 047635          308 KIGNGVLVGAGTCI---LGNIKIGDGAKIGAGSVVLKDVPPRTTA  349 (388)
Q Consensus       308 ~IGd~V~IGaga~I---lg~V~IGd~v~IGagsVV~~dVp~~s~V  349 (388)
                      +|+++|+|-+-+++   .|++.||+|++|..-++|..-.|+|.++
T Consensus        28 ti~~gcVvHP~a~~iA~aGPI~iGEnniiEEyA~i~n~~~~~~~~   72 (190)
T KOG4042|consen   28 TIKEGCVVHPFAVFIATAGPIYIGENNIIEEYAVIRNRLEPGAVW   72 (190)
T ss_pred             EecCCcEecceEEEEcccCCEEEccCchhhhHHHHHhhcCCCCcc
Confidence            33444444443333   2344444444444444444444444433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	388
1t3d_A	289	Crystal Structure Of Serine Acetyltransferase From		2e-55
3gvd_A	276	Crystal Structure Of Serine Acetyltransferase Cyse		1e-54
1ssq_A	267	Serine Acetyltransferase- Complex With Cysteine Len		7e-52
1sst_A	267	Serine Acetyltransferase- Complex With Coa Length =		7e-52
3mc4_A	287	Crystal Structure Of WwRSP5WWP DOMAIN: BACTERIAL TR		3e-51
1ssm_A	242	Serine Acetyltransferase- Apoenzyme (Truncated) Len		8e-51
1s80_A	278	Structure Of Serine Acetyltransferase From Haemophi		9e-51
3p47_A	315	Crystal Structure Of Entamoeba Histolytica Serine A		4e-19
3p1b_A	314	Crystal Structure Of The Native Serine Acetyltransf		4e-19
3q1x_A	313	Crystal Structure Of Entamoeba Histolytica Serine A		5e-19
3f1x_A	310	Three Dimensional Structure Of The Serine Acetyltra		3e-14
1kqa_A	203	Galactoside Acetyltransferase In Complex With Coenz		1e-05
3srt_A	188	The Crystal Structure Of A Maltose O-Acetyltransfer		9e-05

>pdb|1T3D|A Chain A, Crystal Structure Of Serine Acetyltransferase From E.Coli At 2.2a Length = 289

Iteration: 1
 Score =  213 bits (541), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 114/237 (48%), Positives = 147/237 (62%)
Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
           +W  ++ EAR+  + EP L+S+Y A++L H++L                  +  + E+  
Sbjct: 25  VWNNIKAEARTLADCEPXLASFYHATLLKHENLGSALSYXLANKLSSPIXPAIAIREVVE 84
Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                D E I +   D+ A++ RDPA   Y+  LL  KGF A QA+RI H LW QGR+ L
Sbjct: 85  EAYAADPEXIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRAL 144
Query: 242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
           A+ +QN+VS  F VDIHP AKIGRG+  DHATG+VVGETAVI ++VSIL +VTLGGTGK 
Sbjct: 145 AIFLQNQVSVTFQVDIHPAAKIGRGIXLDHATGIVVGETAVIENDVSILQSVTLGGTGKS 204
Query: 302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLIG 358
            GDRHPKI  GV +GAG  IL              SVVL+ VPP TTA G PAR++G
Sbjct: 205 GGDRHPKIREGVXIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVG 261

>pdb|3GVD|A Chain A, Crystal Structure Of Serine Acetyltransferase Cyse From Yersinia Pestis Length = 276

Iteration: 1
 Score =  210 bits (535), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/255 (44%), Positives = 154/255 (60%), Gaps = 5/255 (1%)
Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
           +W  ++ EAR+  E EP+L+S++ A++L H++L                  +  + E+  
Sbjct: 12  VWSNIKSEARALAECEPMLASFFHATLLKHENLGSALSYILANKLANPIMPAIAIREVVE 71
Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                D  +I +   D++A++ RDPA   Y+  LL  KGF A QA+RI H LW Q RK L
Sbjct: 72  EAYRSDAHMIVSAARDILAVRLRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWAQDRKAL 131
Query: 242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
           A+ +QN+VS  F VDIHP A IG G++ DHATG+V+GETAV+ ++VSIL +VTLGGTGK 
Sbjct: 132 AIYLQNQVSVAFGVDIHPAATIGCGIMLDHATGIVIGETAVVENDVSILQSVTLGGTGKT 191
Query: 302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLIGGKE 361
           SGDRHPKI  GV++GAG  IL              SVVL+ VP  TTA G PAR++G  E
Sbjct: 192 SGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQSVPAHTTAAGVPARIVGKPE 251
Query: 362 NPFMLDKIPSFTMDH 376
           +    DK PS  MD 
Sbjct: 252 S----DK-PSLDMDQ 261

>pdb|1SSQ|A Chain A, Serine Acetyltransferase- Complex With Cysteine Length = 267

Iteration: 1
 Score =  201 bits (510), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 105/236 (44%), Positives = 142/236 (60%)
Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
           +W  ++ EA+   E EP+L+S++ ++IL H++L                  + +L E+  
Sbjct: 5   VWQHIRQEAKELAENEPMLASFFHSTILKHQNLGGALSYLLANKLANPIMPAISLREIIE 64
Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                +  II     D+ A++ RDPA   ++  LL  KGF A Q++RI H LW Q RK L
Sbjct: 65  EAYQSNPSIIDCAACDIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSL 124
Query: 242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
           AL +QN++S  F VDIHP AKIG G++FDHATG+VVGET+VI ++VSIL  VTLGGTGK 
Sbjct: 125 ALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTGKE 184
Query: 302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLI 357
           SGDRHPK+  GV++GAG  IL              SVVL  VP   TA G PAR++
Sbjct: 185 SGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV 240

>pdb|1SST|A Chain A, Serine Acetyltransferase- Complex With Coa Length = 267

Iteration: 1
 Score =  201 bits (510), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 105/236 (44%), Positives = 142/236 (60%)
Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
           +W  ++ EA+   E EP+L+S++ ++IL H++L                  + +L E+  
Sbjct: 5   VWQHIRQEAKELAENEPMLASFFHSTILKHQNLGGALSYLLANKLANPIMPAISLREIIE 64
Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                +  II     D+ A++ RDPA   ++  LL  KGF A Q++RI H LW Q RK L
Sbjct: 65  EAYQSNPSIIDCAACDIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSL 124
Query: 242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
           AL +QN++S  F VDIHP AKIG G++FDHATG+VVGET+VI ++VSIL  VTLGGTGK 
Sbjct: 125 ALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTGKE 184
Query: 302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLI 357
           SGDRHPK+  GV++GAG  IL              SVVL  VP   TA G PAR++
Sbjct: 185 SGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV 240

>pdb|3MC4|A Chain A, Crystal Structure Of WwRSP5WWP DOMAIN: BACTERIAL TRANSFERASE Hexapeptide Repeat: Serine O-Acetyltransferase From Brucella Melitensis Length = 287

Iteration: 1
 Score =  199 bits (505), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 107/237 (45%), Positives = 139/237 (58%)
Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
           +W  ++ EA      +PVL ++ +A+IL+  SLE                 +  L + F 
Sbjct: 32  IWHSIRAEAEEATRNDPVLGAFLYATILNQPSLEEAVMHRIAERLGHPDVSADILRQTFD 91
Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
            ++  + E    ++ D+ A+ +RDPA   +   +L  KGF A Q HR+AH L+ QGRK  
Sbjct: 92  TMLEANPEWSHVLRVDIQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGRKDF 151
Query: 242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
           A  +Q+R S +F  DIHP A++G GL  DHATG+VVGETAV+ DNVSILH VTLGGTGK 
Sbjct: 152 AYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKS 211
Query: 302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLIG 358
           SGDRHPKI  GVL+GAG  IL              SVVLK VP   T  G PAR+IG
Sbjct: 212 SGDRHPKIRQGVLIGAGAKILGNIQVGQXSKIAAGSVVLKSVPHNVTVAGVPARIIG 268

>pdb|1SSM|A Chain A, Serine Acetyltransferase- Apoenzyme (Truncated) Length = 242

Iteration: 1
 Score =  197 bits (501), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 106/236 (44%), Positives = 140/236 (59%)
Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
           +W  ++ EA+   E EP L+S++ ++IL H++L                  + +L E+  
Sbjct: 5   VWQHIRQEAKELAENEPXLASFFHSTILKHQNLGGALSYLLANKLANPIXPAISLREIIE 64
Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                +  II     D+ A++ RDPA   ++  LL  KGF A Q++RI H LW Q RK L
Sbjct: 65  EAYQSNPSIIDCAACDIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSL 124
Query: 242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
           AL +QN++S  F VDIHP AKIG G+ FDHATG+VVGET+VI ++VSIL  VTLGGTGK 
Sbjct: 125 ALYLQNQISVAFDVDIHPAAKIGHGIXFDHATGIVVGETSVIENDVSILQGVTLGGTGKE 184
Query: 302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLI 357
           SGDRHPK+  GV +GAG  IL              SVVL  VP   TA G PAR++
Sbjct: 185 SGDRHPKVREGVXIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV 240

>pdb|1S80|A Chain A, Structure Of Serine Acetyltransferase From Haemophilis Influenzae Rd Length = 278

Iteration: 1
 Score =  197 bits (501), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 106/236 (44%), Positives = 140/236 (59%)
Query: 122 LWLKMQDEARSDVEEEPVLSSYYFASILSHKSLEXXXXXXXXXXXXXXXXQSGTLFELFM 181
           +W  ++ EA+   E EP L+S++ ++IL H++L                  + +L E+  
Sbjct: 7   VWQHIRQEAKELAENEPXLASFFHSTILKHQNLGGALSYLLANKLANPIXPAISLREIIE 66
Query: 182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVL 241
                +  II     D+ A++ RDPA   ++  LL  KGF A Q++RI H LW Q RK L
Sbjct: 67  EAYQSNPSIIDCAACDIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSL 126
Query: 242 ALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM 301
           AL +QN++S  F VDIHP AKIG G+ FDHATG+VVGET+VI ++VSIL  VTLGGTGK 
Sbjct: 127 ALYLQNQISVAFDVDIHPAAKIGHGIXFDHATGIVVGETSVIENDVSILQGVTLGGTGKE 186
Query: 302 SGDRHPKIGNGVLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLI 357
           SGDRHPK+  GV +GAG  IL              SVVL  VP   TA G PAR++
Sbjct: 187 SGDRHPKVREGVXIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV 242

>pdb|3P47|A Chain A, Crystal Structure Of Entamoeba Histolytica Serine Acetyltransferase 1 In Complex With L-Cysteine Length = 315

Iteration: 1
 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 178 ELF-----MGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHR 232
           ELF     M ++ +   I + +K DLIA    DPA    +  +  + GF A   +RIAH 
Sbjct: 84  ELFAHQCVMAILEKLPSIKRTLKTDLIAAYAGDPAAPGLSLIIRCYPGFQAVIVYRIAHV 143
Query: 233 LWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHN 292
           L+  G +     +   V    S+DIHPGA I      DH  GVV+GETA+IG+   I  +
Sbjct: 144 LYECGERYYCREMMESVHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQS 203
Query: 293 VTL--------GGTGKMSGDRHPKIGNGVLVGAGTCIL 322
           VTL        GG  K    RHP +G+ V +G G  +L
Sbjct: 204 VTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVL 241

>pdb|3P1B|A Chain A, Crystal Structure Of The Native Serine Acetyltransferase 1 From Entamoeba Histolytica Length = 314

Iteration: 1
 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 178 ELF-----MGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHR 232
           ELF     M ++ +   I + +K DLIA    DPA    +  +  + GF A   +RIAH 
Sbjct: 83  ELFAHQCVMAILEKLPSIKRTLKTDLIAAYAGDPAAPGLSLIIRCYPGFQAVIVYRIAHV 142
Query: 233 LWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHN 292
           L+  G +     +   V    S+DIHPGA I      DH  GVV+GETA+IG+   I  +
Sbjct: 143 LYECGERYYCREMMESVHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQS 202
Query: 293 VTL--------GGTGKMSGDRHPKIGNGVLVGAGTCIL 322
           VTL        GG  K    RHP +G+ V +G G  +L
Sbjct: 203 VTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVL 240

>pdb|3Q1X|A Chain A, Crystal Structure Of Entamoeba Histolytica Serine Acetyltransferase 1 In Complex With L-Serine Length = 313

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 178 ELF-----MGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHR 232
           ELF     M ++ +   I + +K DLIA    DPA    +  +  + GF A   +RIAH 
Sbjct: 82  ELFAHQCVMAILEKLPSIKRTLKTDLIAAYAGDPAAPGLSLIIRCYPGFQAVIVYRIAHV 141
Query: 233 LWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHN 292
           L+  G +     +   V    S+DIHPGA I      DH  GVV+GETA+IG+   I  +
Sbjct: 142 LYECGERYYCREMMESVHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQS 201
Query: 293 VTL--------GGTGKMSGDRHPKIGNGVLVGAGTCIL 322
           VTL        GG  K    RHP +G+ V +G G  +L
Sbjct: 202 VTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVL 239

>pdb|3F1X|A Chain A, Three Dimensional Structure Of The Serine Acetyltransferase From Bacteroides Vulgatus, Northeast Structural Genomics Consortium Target Bvr62 Length = 310

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 189 EIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNR 248
           E+ + +  D+ A    DPA   +   +  +    A   +RIAH L + G  ++   I   
Sbjct: 125 ELRRILATDVEAAYYGDPAATCFGEIISCYPAIRAISNYRIAHELLILGVPLIPRFITEX 184
Query: 249 VSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLG---------GTG 299
                 +DIHPGA+IG     DH TGVV+G T++IG+NV +   VTLG         G  
Sbjct: 185 AHSETGIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNNGNP 244
Query: 300 KMSGDRHPKIGNGVLVGAGTCIL 322
                RHP + + V+V +   IL
Sbjct: 245 IKGIPRHPILEDDVIVYSNATIL 267

>pdb|1KQA|A Chain A, Galactoside Acetyltransferase In Complex With Coenzyme A Length = 203

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 263 IGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTG-------KMSGDRHP---KIGNG 312
           IGR    +    +V   T  IGDNV I  NVTL  TG       + +G+ +     IGN 
Sbjct: 78  IGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNN 137
Query: 313 VLVGAGTCILXXXXXXXXXXXXXXSVVLKDVPPRTTAVGNPARLI 357
           V +G+   I               S+V KD+PP   A G P R+I
Sbjct: 138 VWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVI 182

>pdb|3SRT|A Chain A, The Crystal Structure Of A Maltose O-Acetyltransferase From Clostridium Difficile 630 Length = 188

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 283 IGDNVSILHNVTL-------GGTGKMSGDRHP---KIGNGVLVGAGTCILXXXXXXXXXX 332
           IGDNV +  NV +           + SG  +    KIG+ V +G G  I           
Sbjct: 99  IGDNVXLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDNVV 158
Query: 333 XXXXSVVLKDVPPRTTAVGNPARLI 357
               SVV KD+PP T AVGNP R+I
Sbjct: 159 IGAGSVVTKDIPPNTVAVGNPCRVI 183

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	388
1ssq_A	267	SAT, serine acetyltransferase; LEFT-handed paralle	1e-146
3mc4_A	287	WW/RSP5/WWP domain:bacterial transferase hexapept	1e-145
1t3d_A	289	SAT, serine acetyltransferase; LEFT-handed-beta-he	1e-145
3f1x_A	310	Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9	4e-68
3q1x_A	313	Serine acetyltransferase; cysteine biosynthesis, L	1e-66
3bfp_A	194	Acetyltransferase; LEFT-handed beta helix, COA bin	1e-27
4ea9_A	220	Perosamine N-acetyltransferase; beta helix, acetyl	2e-25
3vbi_A	205	ANTD, galactoside O-acetyltransferase; anthrose, a	1e-24
3vbi_A	205	ANTD, galactoside O-acetyltransferase; anthrose, a	6e-06
3r8y_A	240	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- ac	2e-24
3fs8_A	273	QDTC; acetyltransferase, natural product, deoxysug	3e-23
3fs8_A	273	QDTC; acetyltransferase, natural product, deoxysug	1e-08
3fs8_A	273	QDTC; acetyltransferase, natural product, deoxysug	3e-07
3fs8_A	273	QDTC; acetyltransferase, natural product, deoxysug	7e-07
3hjj_A	190	Maltose O-acetyltransferase; LEFT-handed beta-heli	2e-20
3ftt_A	199	Putative acetyltransferase sacol2570; galactoside	2e-20
2p2o_A	185	Maltose transacetylase; GK1921, GKA001001921.1, ge	2e-20
1krr_A	203	Galactoside O-acetyltransferase; LEFT-handed paral	2e-20
1ocx_A	182	Maltose O-acetyltransferase; LEFT-handed parallel	3e-20
3jqy_B	252	NEUO, polysialic acid O-acetyltransferase; LEFT-ha	3e-20
3srt_A	188	Maltose O-acetyltransferase; structural genomics,	3e-20
3nz2_A	195	Hexapeptide-repeat containing-acetyltransferase; s	3e-20
3mqg_A	192	Lipopolysaccharides biosynthesis acetyltransferas;	1e-19
3mqg_A	192	Lipopolysaccharides biosynthesis acetyltransferas;	1e-08
3mqg_A	192	Lipopolysaccharides biosynthesis acetyltransferas;	6e-05
1mr7_A	209	Streptogramin A acetyltransferase; LEFT-handed par	2e-18
1xat_A	212	Xenobiotic acetyltransferase; chloramphenicol, LEF	2e-18
2wlg_A	215	Polysialic acid O-acetyltransferase; enzyme, LEFT-	2e-18
4e8l_A	219	Virginiamycin A acetyltransferase; structural geno	8e-18
3eev_A	212	Chloramphenicol acetyltransferase; beta-helix, str	3e-17
3r3r_A	187	Ferripyochelin binding protein; structural genomic	1e-14
1v3w_A	173	Ferripyochelin binding protein; beta-helix, carbon	2e-14
1xhd_A	173	Putative acetyltransferase/acyltransferase; struct	2e-14
3r1w_A	189	Carbonic anhydrase; beta-helix, lyase; 1.73A {Unid	2e-14
3ixc_A	191	Hexapeptide transferase family protein; niaid, ssg	2e-14
2qia_A	262	UDP-N-acetylglucosamine acyltransferase; LEFT-hand	3e-14
2qia_A	262	UDP-N-acetylglucosamine acyltransferase; LEFT-hand	1e-05
1j2z_A	270	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	3e-14
1j2z_A	270	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	7e-06
3r0s_A	266	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	3e-14
3r0s_A	266	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	1e-05
4eqy_A	283	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	8e-14
4eqy_A	283	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	8e-06
3hsq_A	259	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosam	1e-13
3hsq_A	259	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosam	7e-06
3t57_A	305	UDP-N-acetylglucosamine O-acyltransferase domain-	4e-13
2iu8_A	374	LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a	3e-11
2iu8_A	374	LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a	5e-09
2iu8_A	374	LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a	1e-07
3pmo_A	372	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr;	2e-10
3pmo_A	372	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr;	6e-09
3pmo_A	372	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr;	1e-08
3pmo_A	372	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr;	7e-08
3eh0_A	341	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltr	2e-10
3eh0_A	341	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltr	2e-09
3eh0_A	341	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltr	4e-09
3eh0_A	341	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltr	1e-08
2ggo_A	401	401AA long hypothetical glucose-1-phosphate thymid	5e-09
2ggo_A	401	401AA long hypothetical glucose-1-phosphate thymid	3e-04
3c8v_A	496	Putative acetyltransferase; YP_390128.1, structura	6e-09
2pig_A	334	Putative transferase; SCR6, NESG, YDCK, structural	3e-08
1qre_A	247	Carbonic anhydrase; beta-helix, lyase; 1.46A {Meth	6e-08
3eg4_A	304	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su	2e-07
2v0h_A	456	Bifunctional protein GLMU; cell WALL, magnesium, c	3e-07
2v0h_A	456	Bifunctional protein GLMU; cell WALL, magnesium, c	2e-05
4fce_A	459	Bifunctional protein GLMU; GLMU. csgid, niaid, str	4e-07
4fce_A	459	Bifunctional protein GLMU; GLMU. csgid, niaid, str	1e-05
3st8_A	501	Bifunctional protein GLMU; acetyltransferase, pyro	5e-07
1hm9_A	468	GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr	5e-07
1hm9_A	468	GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr	9e-04
3gos_A	276	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su	3e-06
3tk8_A	316	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su	4e-06
3kwd_A	213	Carbon dioxide concentrating mechanism protein; LE	3e-05

>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A* Length = 267

 Score =  413 bits (1064), Expect = e-146
 Identities = 123/259 (47%), Positives = 172/259 (66%), Gaps = 5/259 (1%)

Query: 119 DVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFE 178
           ++D+W  ++ EA+   E EP+L+S++ ++IL H++L  AL+  L+ KL++  + + +L E
Sbjct: 2   NLDVWQHIRQEAKELAENEPMLASFFHSTILKHQNLGGALSYLLANKLANPIMPAISLRE 61

Query: 179 LFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGR 238
           +       +  II     D+ A++ RDPA   ++  LL  KGF A Q++RI H LW Q R
Sbjct: 62  IIEEAYQSNPSIIDCAACDIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNR 121

Query: 239 KVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGT 298
           K LAL +QN++S  F VDIHP AKIG G++FDHATG+VVGET+VI ++VSIL  VTLGGT
Sbjct: 122 KSLALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGT 181

Query: 299 GKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
           GK SGDRHPK+  GV++GAG  ILGNI++G  AKIGA SVVL  VP   TA G PAR++ 
Sbjct: 182 GKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIVS 241

Query: 359 GKENPFMLDKIPSFTMDHT 377
             +        P+F M+  
Sbjct: 242 QDK-----AAKPAFDMNQY 255

>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus} Length = 287

 Score =  413 bits (1064), Expect = e-145
 Identities = 120/257 (46%), Positives = 160/257 (62%), Gaps = 5/257 (1%)

Query: 121 DLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELF 180
            +W  ++ EA      +PVL ++ +A+IL+  SLE A+   ++ +L    + +  L + F
Sbjct: 31  PIWHSIRAEAEEATRNDPVLGAFLYATILNQPSLEEAVMHRIAERLGHPDVSADILRQTF 90

Query: 181 MGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKV 240
             ++  + E    ++ D+ A+ +RDPA   +   +L  KGF A Q HR+AH L+ QGRK 
Sbjct: 91  DTMLEANPEWSHVLRVDIQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGRKD 150

Query: 241 LALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGK 300
            A  +Q+R S +F  DIHP A++G GL  DHATG+VVGETAV+ DNVSILH VTLGGTGK
Sbjct: 151 FAYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGK 210

Query: 301 MSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGK 360
            SGDRHPKI  GVL+GAG  ILGNI++G  +KI AGSVVLK VP   T  G PAR+IG  
Sbjct: 211 SSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLKSVPHNVTVAGVPARIIGET 270

Query: 361 ENPFMLDKIPSFTMDHT 377
                    PS  MD  
Sbjct: 271 G-----CTEPSRVMDQM 282

>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6 Length = 289

 Score =  412 bits (1061), Expect = e-145
 Identities = 138/271 (50%), Positives = 185/271 (68%), Gaps = 9/271 (3%)

Query: 121 DLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELF 180
            +W  ++ EAR+  + EP+L+S+Y A++L H++L SAL+  L+ KLSS  + +  + E+ 
Sbjct: 24  IVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPAIAIREVV 83

Query: 181 MGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKV 240
                 D E+I +   D+ A++ RDPA   Y+  LL  KGF A QA+RI H LW QGR+ 
Sbjct: 84  EEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRA 143

Query: 241 LALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGK 300
           LA+ +QN+VS  F VDIHP AKIGRG++ DHATG+VVGETAVI ++VSIL +VTLGGTGK
Sbjct: 144 LAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGK 203

Query: 301 MSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGK 360
             GDRHPKI  GV++GAG  ILGNI++G GAKIGAGSVVL+ VPP TTA G PAR++G  
Sbjct: 204 SGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKP 263

Query: 361 ENPFMLDKIPSFTMDH----TSHIHEWSDYV 387
           ++       PS  MD      +H  E+ D +
Sbjct: 264 DS-----DKPSMDMDQHFNGINHTFEYGDGI 289

>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482} Length = 310

 Score =  216 bits (552), Expect = 4e-68
 Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 9/183 (4%)

Query: 189 EIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNR 248
           E+ + +  D+ A    DPA   +   +  +    A   +RIAH L + G  ++   I   
Sbjct: 125 ELRRILATDVEAAYYGDPAATCFGEIISCYPAIRAISNYRIAHELLILGVPLIPRFITEM 184

Query: 249 VSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLG---------GTG 299
                 +DIHPGA+IG     DH TGVV+G T++IG+NV +   VTLG         G  
Sbjct: 185 AHSETGIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNNGNP 244

Query: 300 KMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG 359
                RHP + + V+V +   ILG + IG GA +G    V ++VP  +  V    +    
Sbjct: 245 IKGIPRHPILEDDVIVYSNATILGRVTIGKGATVGGNIWVTENVPAGSRIVQRKNKDELE 304

Query: 360 KEN 362
             +
Sbjct: 305 HHH 307

>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A Length = 313

 Score =  212 bits (542), Expect = 1e-66
 Identities = 65/197 (32%), Positives = 91/197 (46%), Gaps = 10/197 (5%)

Query: 189 EIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNR 248
            I + +K DLIA    DPA    +  +  + GF A   +RIAH L+  G +     +   
Sbjct: 98  SIKRTLKTDLIAAYAGDPAAPGLSLIIRCYPGFQAVIVYRIAHVLYECGERYYCREMMES 157

Query: 249 VSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLG--------GTGK 300
           V    S+DIHPGA I      DH  GVV+GETA+IG+   I  +VTLG        G  K
Sbjct: 158 VHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIK 217

Query: 301 MSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAV--GNPARLIG 358
               RHP +G+ V +G G  +LGNI +G   +IGA   + +DV    T     +P   + 
Sbjct: 218 RGTKRHPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDRDVDSNQTVYISEHPTHFVK 277

Query: 359 GKENPFMLDKIPSFTMD 375
                 M +      + 
Sbjct: 278 PCTTKGMKNDTEIIAII 294

>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A Length = 194

 Score =  106 bits (268), Expect = 1e-27
 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 10/101 (9%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I+  AKI +G++ +  T  V+    VIG+   +       G        + KIG    +G
Sbjct: 104 INAKAKIEKGVILN--TSSVIEHECVIGEFSHVSVGAKCAG--------NVKIGKNCFLG 153

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
             +C+L N+ + D + +G G+ ++K+   +   VG PA+ +
Sbjct: 154 INSCVLPNLSLADDSILGGGATLVKNQDEKGVFVGVPAKRM 194

>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A* Length = 220

 Score =  101 bits (254), Expect = 2e-25
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 10/104 (9%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I+  + IG   + +  TG VV     +G    +     L G           +G    +G
Sbjct: 126 INADSWIGDLAIIN--TGAVVDHDCRLGAACHLGPASALAG--------GVSVGERAFLG 175

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGK 360
            G  ++  + IG    +GAG VV++D+P    A+G PA++ G +
Sbjct: 176 VGARVIPGVTIGADTIVGAGGVVVRDLPDSVLAIGVPAKIKGDR 219

>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A* Length = 205

 Score = 99.4 bits (248), Expect = 1e-24
 Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 18/122 (14%)

Query: 255 VDIHPGAKIGR-------GLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP 307
             +     IG          L+    G+ + + A I     +   +       + G   P
Sbjct: 65  CILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDFSGNALMGPTIP 124

Query: 308 K-----------IGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARL 356
                       +   V++GA + I  N+ IG+G  +GA S+V + +      VG P R 
Sbjct: 125 NQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVKESLDDWYIYVGVPVRK 184

Query: 357 IG 358
           I 
Sbjct: 185 IK 186

>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A* Length = 205

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 6/61 (9%)

Query: 279 ETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSV 338
               +G NV I    ++             IGN V +     + G + IG  + I A + 
Sbjct: 31  GFLSVGKNVLISKKASI------YNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTA 84

Query: 339 V 339
           +
Sbjct: 85  L 85

>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A* Length = 240

 Score = 99.1 bits (247), Expect = 2e-24
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I+ GA IG G + D     V+G  A +G N  +     L G  +    +   + + V++G
Sbjct: 118 INIGAVIGEGSMID--MNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIG 175

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
           A   +L  + +G GA + AG+VV +DVPP T   G PAR+I 
Sbjct: 176 ANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIK 217

>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A* Length = 273

 Score = 97.1 bits (242), Expect = 3e-23
 Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRH--PKIGNG 312
            DI     IG  +       V VGE ++I D V +  +V L        +      I   
Sbjct: 119 SDIQHHVYIGNYVNIHS--NVFVGEKSIIKDFVWLFPHVVLTNDPTPPSNELLGVTIELF 176

Query: 313 VLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
            ++ A + +L  I I + A +GAG+VV KDVP  T  VGNPAR I 
Sbjct: 177 AVIAARSVVLPGIHINEDALVGAGAVVTKDVPKETVVVGNPAREIC 222

>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A* Length = 273

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 8/89 (8%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVL 314
           V I  G  I           V + + + IG    +   +      +++      IG   L
Sbjct: 27  VYIDYGCIIRDN--------VHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENAL 78

Query: 315 VGAGTCILGNIKIGDGAKIGAGSVVLKDV 343
           +     I G+  IGD  + G    + ++ 
Sbjct: 79  IRTENVIYGDTIIGDNFQTGHKVTIRENT 107

>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A* Length = 273

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 10/105 (9%)

Query: 245 IQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGT---GKM 301
           I++ V       I   + +G  L+  +   +      +IG+N  I     + G    G  
Sbjct: 35  IRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIYGDTIIGDN 94

Query: 302 SGDRHP-------KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV 339
               H        KIGN V +G  + I  ++ IG+   I +   V
Sbjct: 95  FQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFV 139

>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A* Length = 273

 Score = 49.4 bits (118), Expect = 7e-07
 Identities = 18/93 (19%), Positives = 27/93 (29%), Gaps = 28/93 (30%)

Query: 254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGV 313
             +I   A I               E  +IG+NV+I  NV               I  G 
Sbjct: 2   PNNISKSAIIK--------------EGVIIGENVTIEDNV--------------YIDYGC 33

Query: 314 LVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPR 346
           ++     I     IG  + +G   V   +    
Sbjct: 34  IIRDNVHIKKGSFIGARSILGEYLVDFYNDRIN 66

>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} PDB: 3igj_A* Length = 190

 Score = 87.2 bits (217), Expect = 2e-20
 Identities = 32/91 (35%), Positives = 39/91 (42%), Gaps = 22/91 (24%)

Query: 283 IGDNVSILHNVTLGGTGKMSGDRHP----------------KIGNGVLVGAGTCILGNIK 326
           IGD+      V +          HP                KIGN V VG G  I   + 
Sbjct: 101 IGDHCMFAPGVHIYTAT------HPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINPGVS 154

Query: 327 IGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           IGD A I +G+VV KDVP      GNPA++I
Sbjct: 155 IGDNAVIASGAVVTKDVPNNVVVGGNPAKVI 185

>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* Length = 199

 Score = 87.2 bits (217), Expect = 2e-20
 Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 22/91 (24%)

Query: 283 IGDNVSILHNVTLGGTGKMSGDRHP----------------KIGNGVLVGAGTCILGNIK 326
           IGDNV I  N             HP                 IG+    G    +L  + 
Sbjct: 97  IGDNVFIGPNCGFYTAT------HPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVT 150

Query: 327 IGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           IG+G+ IGAGSVV KD+PP + AVGNP +++
Sbjct: 151 IGEGSVIGAGSVVTKDIPPHSLAVGNPCKVV 181

>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A Length = 185

 Score = 86.8 bits (216), Expect = 2e-20
 Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 22/91 (24%)

Query: 283 IGDNVSILHNVTLGGTGKMSGDRHP----------------KIGNGVLVGAGTCILGNIK 326
           IGD+  I   V +          HP                 IG+ V +G    I   + 
Sbjct: 97  IGDHCFIGPGVHIYTAT------HPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVT 150

Query: 327 IGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           IGD A I +G+VV KDVP      GNPA++I
Sbjct: 151 IGDNAVIASGAVVTKDVPANAVVGGNPAKVI 181

>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A* Length = 203

 Score = 87.2 bits (217), Expect = 2e-20
 Identities = 38/91 (41%), Positives = 45/91 (49%), Gaps = 22/91 (24%)

Query: 283 IGDNVSILHNVTLGGTGKMSGDRHP----------------KIGNGVLVGAGTCILGNIK 326
           IGDNV I  NVTL  TG      HP                 IGN V +G+   I   + 
Sbjct: 98  IGDNVLIAPNVTLSVTG------HPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVT 151

Query: 327 IGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           IGD + IGAGS+V KD+PP   A G P R+I
Sbjct: 152 IGDNSVIGAGSIVTKDIPPNVVAAGVPCRVI 182

>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3 Length = 182

 Score = 86.4 bits (215), Expect = 3e-20
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 22/91 (24%)

Query: 283 IGDNVSILHNVTLGGTGKMSGDRHP----------------KIGNGVLVGAGTCILGNIK 326
           IGDN  +   V +          HP                 IGN V +G    I   + 
Sbjct: 95  IGDNCMLAPGVHIYTAT------HPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVT 148

Query: 327 IGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           IGD   + +G+VV KDVP      GNPAR+I
Sbjct: 149 IGDNVVVASGAVVTKDVPDNVVVGGNPARII 179

>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli} Length = 252

 Score = 88.3 bits (219), Expect = 3e-20
 Identities = 36/113 (31%), Positives = 48/113 (42%), Gaps = 22/113 (19%)

Query: 262 KIGRGLLFDHATGVVVGETAV-IGDNVSILHNVTLGGTGKMSGDRHP------------- 307
            IGR         VV  +  V IG +  I  +V L      + D HP             
Sbjct: 107 IIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVIL-----RASDGHPIFDIHSKKRINWA 161

Query: 308 ---KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
               I + V VG    I+  + +G G+ IG GS+V KDVP    A GNPA++I
Sbjct: 162 KDIIISSYVWVGRNVSIMKGVSVGSGSVIGYGSIVTKDVPSMCAAAGNPAKII 214

>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} Length = 188

 Score = 86.8 bits (216), Expect = 3e-20
 Identities = 39/91 (42%), Positives = 45/91 (49%), Gaps = 22/91 (24%)

Query: 283 IGDNVSILHNVTLGGTGKMSGDRHP----------------KIGNGVLVGAGTCILGNIK 326
           IGDNV +  NV +          HP                KIG+ V +G G  I   I 
Sbjct: 99  IGDNVMLAPNVQIYTAY------HPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGIT 152

Query: 327 IGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           IGD   IGAGSVV KD+PP T AVGNP R+I
Sbjct: 153 IGDNVVIGAGSVVTKDIPPNTVAVGNPCRVI 183

>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} PDB: 3ect_A* Length = 195

 Score = 86.4 bits (215), Expect = 3e-20
 Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 22/91 (24%)

Query: 283 IGDNVSILHNVTLGGTGKMSGDRHP----------------KIGNGVLVGAGTCILGNIK 326
           IGD+V I  +             H                  I + V +G    I   + 
Sbjct: 99  IGDHVLIGPSTQFYTAS------HSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQGVT 152

Query: 327 IGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           IG  + + A SVV +DVPP T   G PAR++
Sbjct: 153 IGARSVVAANSVVNQDVPPDTLVGGTPARIL 183

>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A* Length = 192

 Score = 85.0 bits (210), Expect = 1e-19
 Identities = 45/153 (29%), Positives = 61/153 (39%), Gaps = 32/153 (20%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTL------------GGTGKMS 302
           V I  GA+IG G        V VG    IG+ V I +NV++            G +   +
Sbjct: 28  VHICGGAEIGEGCSLG--QNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFT 85

Query: 303 GDRHP-------------KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTA 349
              +P              +  G  +GA   ++    IG  A +GAG+VV KDVP     
Sbjct: 86  NVYNPRAAIERKSEYRDTIVRQGATLGANCTVVCGATIGRYAFVGAGAVVNKDVPDFALV 145

Query: 350 VGNPARLIG-----GKENPFMLDKIPSFTMDHT 377
           VG PAR IG     G++    L      T  HT
Sbjct: 146 VGVPARQIGWMSRHGEQLDLPLRGNAEATCPHT 178

>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A* Length = 192

 Score = 53.8 bits (129), Expect = 1e-08
 Identities = 28/129 (21%), Positives = 41/129 (31%), Gaps = 22/129 (17%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVL 314
             IHP A              +V E A IG +  I H V + G          +IG G  
Sbjct: 4   ATIHPTA--------------IVDEGARIGAHSRIWHWVHICG--------GAEIGEGCS 41

Query: 315 VGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSFTM 374
           +G    +   ++IG+  KI     V  +V         P+ +     NP    +  S   
Sbjct: 42  LGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNVYNPRAAIERKSEYR 101

Query: 375 DHTSHIHEW 383
           D        
Sbjct: 102 DTIVRQGAT 110

>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A* Length = 192

 Score = 42.7 bits (100), Expect = 6e-05
 Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 20/70 (28%)

Query: 274 GVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI 333
              +  TA++ +                      +IG    +     I G  +IG+G  +
Sbjct: 3   MATIHPTAIVDEGA--------------------RIGAHSRIWHWVHICGGAEIGEGCSL 42

Query: 334 GAGSVVLKDV 343
           G    V   V
Sbjct: 43  GQNVFVGNRV 52

>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A* Length = 209

 Score = 82.2 bits (203), Expect = 2e-18
 Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 38/136 (27%)

Query: 253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP----- 307
              D   G    + +L+ +    ++ +   IG   SI   VT+     M+G  H      
Sbjct: 36  SYYDSKNGETFDKQILYHYP---ILNDKLKIGKFCSIGPGVTII----MNGANHRMDGST 88

Query: 308 --------------------------KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK 341
                                      IGN V +G    I+  +KIGDGA + A SVV+K
Sbjct: 89  YPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVK 148

Query: 342 DVPPRTTAVGNPARLI 357
           D+ P   A GNPA  I
Sbjct: 149 DIAPYMLAGGNPANEI 164

>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A* Length = 212

 Score = 82.3 bits (203), Expect = 2e-18
 Identities = 26/115 (22%), Positives = 37/115 (32%), Gaps = 28/115 (24%)

Query: 271 HATGVVVGETAVIGDNVSILHNVTL--GGTGKMSGDR---HP------------------ 307
                   +  VIG   SI         G      +     P                  
Sbjct: 47  LMPDRDDVDKLVIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHEEPAFAGAVNGYQ 106

Query: 308 -----KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
                 IG+ V +G     +  +++G GA IG+ ++V  DV P     GNPAR I
Sbjct: 107 PAGDTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAIVGGNPARTI 161

>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A* Length = 215

 Score = 82.1 bits (203), Expect = 2e-18
 Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 22/92 (23%)

Query: 283 IGDNVSILHNVTLGGTGKMSGDRHP----------------KIGNGVLVGAGTCILGNIK 326
           IG +  + H   +  T     D HP                 IGN V +G    IL  + 
Sbjct: 103 IGKDCMLAHGYEIRNT-----DMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVC 157

Query: 327 IGDGAKIGAGSVVLKDVP-PRTTAVGNPARLI 357
           I +   +G+ +V+ K    P     G+PA+++
Sbjct: 158 IPNNVVVGSHTVLYKSFKEPNCVIAGSPAKIV 189

>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus} Length = 219

 Score = 80.8 bits (199), Expect = 8e-18
 Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 35/113 (30%)

Query: 276 VVGETAVIGDNVSILHNVTLGGTGKMSGDRHP---------------------------- 307
           V+G+  +IG   SI    T      M+G  H                             
Sbjct: 61  VIGDKLIIGRFCSIGPGTTFI----MNGANHRMDGSTYPFHLFRMGWEKYMPSLKDLPLK 116

Query: 308 ---KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
              +IGN V +G    I+  +KIGDGA I A +VV K+V P +   GNP + I
Sbjct: 117 GDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYSIVGGNPLKFI 169

>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} Length = 212

 Score = 78.8 bits (194), Expect = 3e-17
 Identities = 30/103 (29%), Positives = 36/103 (34%), Gaps = 27/103 (26%)

Query: 282 VIGDNVSILHNVTL--GGTGKMSGDR---HP----------------------KIGNGVL 314
           VIG   SI         G      D     P                       IG+ V 
Sbjct: 60  VIGSFCSIGSGAVFMMAGNQGHRSDWISTFPFFYQDNDNFADARDGFTRSGDTIIGHDVW 119

Query: 315 VGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           +G    I+  +KIG GA I + SVV KDV P      NPA+ I
Sbjct: 120 IGTEAMIMPGVKIGHGAIIASRSVVTKDVAPYEVVGSNPAKHI 162

>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} Length = 187

 Score = 70.8 bits (174), Expect = 1e-14
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 11/82 (13%)

Query: 278 GETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGS 337
           G   +IG++V++ H V L G           IGN VLVG G+ +L    I D   IGAGS
Sbjct: 81  GNPLIIGEDVTVGHKVMLHGC---------TIGNRVLVGMGSIVLDGAIIEDDVMIGAGS 131

Query: 338 VVL--KDVPPRTTAVGNPARLI 357
           +V   K +      +G+P + I
Sbjct: 132 LVPQHKRLESGYLYLGSPVKQI 153

>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A Length = 173

 Score = 69.9 bits (172), Expect = 2e-14
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 11/82 (13%)

Query: 278 GETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGS 337
           G    IG+ V+I HN  + G          K+GN V++G  + IL   KIGD   IGAG+
Sbjct: 69  GYPTEIGEYVTIGHNAMVHGA---------KVGNYVIIGISSVILDGAKIGDHVIIGAGA 119

Query: 338 VVL--KDVPPRTTAVGNPARLI 357
           VV   K++P  +  +G P +++
Sbjct: 120 VVPPNKEIPDYSLVLGVPGKVV 141

>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A Length = 173

 Score = 70.0 bits (172), Expect = 2e-14
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 11/82 (13%)

Query: 278 GETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGS 337
               ++ D+V++ H V L             I    L+G G+ IL   +IG+GA IGAGS
Sbjct: 71  QYPLILEDDVTVGHQVILHSC---------HIKKDALIGMGSIILDGAEIGEGAFIGAGS 121

Query: 338 VVL--KDVPPRTTAVGNPARLI 357
           +V   K +PP T A G PA++I
Sbjct: 122 LVSQGKKIPPNTLAFGRPAKVI 143

>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified} Length = 189

 Score = 70.4 bits (173), Expect = 2e-14
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 11/82 (13%)

Query: 278 GETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGS 337
           G   +IGD+V+I H   L G           IGN VL+G  + I+    + D   + AG+
Sbjct: 85  GYPLIIGDDVTIGHQAMLHGC---------TIGNRVLIGMKSMIMDGAIVEDEVIVAAGA 135

Query: 338 VVL--KDVPPRTTAVGNPARLI 357
            V   K +      +G PA+ +
Sbjct: 136 TVSPGKVLESGFVYMGTPAKKV 157

>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum} Length = 191

 Score = 70.0 bits (172), Expect = 2e-14
 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 11/78 (14%)

Query: 282 VIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVL- 340
           VIG  V+I H+  L             +GN   VG G+ ++    + +G+ + AGS++  
Sbjct: 97  VIGKFVTIGHSCILHAC---------TLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTR 147

Query: 341 -KDVPPRTTAVGNPARLI 357
            K V       G PA+ +
Sbjct: 148 GKIVKSGELWAGRPAKFL 165

>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A Length = 262

 Score = 71.5 bits (176), Expect = 3e-14
 Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 17/111 (15%)

Query: 255 VDIHPGAKIGRGL-------LFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP 307
           V IH G   G GL       L        +     +G+   + +N TL G        H 
Sbjct: 96  VTIHRGTVQGGGLTKVGSDNLL--MINAHIAHDCTVGNRCILANNATLAG--------HV 145

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
            + +  ++G  T +     IG    +G  S V +DVPP   A GN A   G
Sbjct: 146 SVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFG 196

>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A Length = 262

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 29/108 (26%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           +  GA IG            +G   ++G +V                    +IG G ++ 
Sbjct: 14  VEEGASIGAN--------AHIGPFCIVGPHV--------------------EIGEGTVLK 45

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPF 364
           +   + G+ KIG   +I   +  + +V       G P R+  G  N  
Sbjct: 46  SHVVVNGHTKIGRDNEIYQFA-SIGEVNQDLKYAGEPTRVEIGDRNRI 92

>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1 Length = 270

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 17/111 (15%)

Query: 255 VDIHPGAKIGRGL-------LFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP 307
             I+PG + G          L      V V    VIG +  + + VTL G        H 
Sbjct: 92  CMINPGTEGGIKKTLIGDKNLL--MAYVHVAHDCVIGSHCILANGVTLAG--------HI 141

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
           +IG+ V +G  T I   ++I  G  I   S + KDVPP  T  GN A + G
Sbjct: 142 EIGDYVNIGGLTAIHQFVRIAKGCMIAGKSALGKDVPPYCTVEGNRAFIRG 192

>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1 Length = 270

 Score = 46.1 bits (110), Expect = 7e-06
 Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 29/108 (26%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I P A+I +G        V +GE  VIGD V                    K+  GV + 
Sbjct: 10  ISPKAEINKG--------VEIGEFCVIGDGV--------------------KLDEGVKLH 41

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPF 364
               + G+  +G   +I   +V+    P      G  + LI G++N  
Sbjct: 42  NNVTLQGHTFVGKNTEIFPFAVL-GTQPQDLKYKGEYSELIIGEDNLI 88

>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} Length = 266

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 17/111 (15%)

Query: 255 VDIHPGAKIGRGL-------LFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP 307
             I+ G   G G                 +    ++G+N+ + +N TL G        H 
Sbjct: 96  ATINSGTAKGDGFTRIGDNAFI--MAYCHIAHDCLLGNNIILANNATLAG--------HV 145

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
           ++G+  +VG  T I   +K+G+G  I   S + +D+ P   A GN A +  
Sbjct: 146 ELGDFTVVGGLTPIHQFVKVGEGCMIAGASALSQDIVPFCLAEGNRASIRS 196

>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} Length = 266

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 28/83 (33%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I  GA++G          VV+   A +  +                     KIGN V++ 
Sbjct: 13  IEEGAQLGDD--------VVIEAYAYVSKDA--------------------KIGNNVVIK 44

Query: 317 AGTCILGNIKIGDGAKIGAGSVV 339
            G  IL +  IGD +++ + ++V
Sbjct: 45  QGARILSDTTIGDHSRVFSYAIV 67

>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis} Length = 283

 Score = 70.4 bits (173), Expect = 8e-14
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 17/111 (15%)

Query: 255 VDIHPGAKIGRGL-------LFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP 307
             IH G     G+              V +G    +G +V +  N  + G        H 
Sbjct: 113 TTIHTGTVQDAGVTTLGDDNWI--MAYVHIGHDCRVGSHVVLSSNAQMAG--------HV 162

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
           +IG+  +VG  + +   ++IG  + +G  S +++D+PP   A GN A   G
Sbjct: 163 EIGDWAIVGGMSGVHQYVRIGAHSMLGGASALVQDIPPFVIAAGNKAEPHG 213

>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis} Length = 283

 Score = 46.1 bits (110), Expect = 8e-06
 Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 29/108 (26%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I PGA++           V VG  A++G NV                     IG    +G
Sbjct: 31  IEPGAQLHET--------VEVGPYAIVGSNV--------------------TIGARTTIG 62

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPF 364
           + + I G+  IG+  +IG  + V    P        P RL+ G  N  
Sbjct: 63  SHSVIEGHTTIGEDNRIGHYASV-GGRPQDMKYKDEPTRLVIGDRNTI 109

>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} PDB: 3i3a_A* 3i3x_A* Length = 259

 Score = 69.2 bits (170), Expect = 1e-13
 Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 16/110 (14%)

Query: 255 VDIHPG------AKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPK 308
            +IH G        IG    F       VG   ++G+N  + H   L G        H  
Sbjct: 92  SNIHKGTKEDSPTVIGNKNYF--MGNSHVGHDCILGNNNILTHGAVLAG--------HVT 141

Query: 309 IGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
           +GN   +     +     +GD + +   + V++DVPP +T  GNP+ ++G
Sbjct: 142 LGNFAFISGLVAVHQFCFVGDYSMVAGLAKVVQDVPPYSTVDGNPSTVVG 191

>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} PDB: 3i3a_A* 3i3x_A* Length = 259

 Score = 46.0 bits (110), Expect = 7e-06
 Identities = 16/83 (19%), Positives = 26/83 (31%), Gaps = 28/83 (33%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I P A++           V VG  ++I  NV                     I  G ++ 
Sbjct: 9   IDPKAELH--------ESVEVGPYSIIEGNV--------------------SIQEGTIIE 40

Query: 317 AGTCILGNIKIGDGAKIGAGSVV 339
               I    +IG   +   G+V+
Sbjct: 41  GHVKICAGSEIGKFNRFHQGAVI 63

>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana} Length = 305

 Score = 68.6 bits (168), Expect = 4e-13
 Identities = 28/110 (25%), Positives = 36/110 (32%), Gaps = 16/110 (14%)

Query: 255 VDIHPGA------KIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPK 308
             IH  +       IG   L        +     IGD     +N  L G        H  
Sbjct: 121 CSIHRSSKPSDKTVIGDNNLI--MGSCHIAHDCKIGDRNIFANNTLLAG--------HVV 170

Query: 309 IGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
           + +       + +     IG  A IG GSVV +DVP      G  A L G
Sbjct: 171 VEDNTHTAGASVVHQFCHIGSFAFIGGGSVVSQDVPKYMMVAGERAELRG 220

>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A* Length = 374

 Score = 63.1 bits (154), Expect = 3e-11
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 17/92 (18%)

Query: 277 VGETAVIG-----DN-VSILHNVTLG-------GTGKMSGDRHPKIGNGVLVGAGTCILG 323
              + V+      DN V I H V +G         G ++G    KIGN V++G    I G
Sbjct: 248 FKHS-VVREGSKIDNLVQIAHQVEVGQHSMIVAQAG-IAGS--TKIGNHVIIGGQAGITG 303

Query: 324 NIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAR 355
           +I I D   + A + V K +       G PAR
Sbjct: 304 HICIADHVIMMAQTGVTKSITSPGIYGGAPAR 335

>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A* Length = 374

 Score = 56.1 bits (136), Expect = 5e-09
 Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 24/105 (22%)

Query: 239 KVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGT 298
           K L L I     +     IHP A              V+  TA+I D+V I     +   
Sbjct: 111 KCLELFITPV--DSGFPGIHPTA--------------VIHPTAIIEDHVCIEPYAVVC-- 152

Query: 299 GKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV 343
                 +H  +G+   +G+G+ I     +G+ + I    V+ + V
Sbjct: 153 ------QHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERV 191

>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A* Length = 374

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 23/107 (21%), Positives = 35/107 (32%), Gaps = 36/107 (33%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLG----------------GT 298
             I  G+ IG            VGE + I   V I   V++G                G 
Sbjct: 161 CHIGSGSVIGAY--------STVGEHSYIHPRVVIRERVSIGKRVIIQPGAVIGSCGFGY 212

Query: 299 GKMSGDRHPK--------IGNGVLVGAGTCI----LGNIKIGDGAKI 333
              +  +H          I + V +GA T I      +  + +G+KI
Sbjct: 213 VTSAFGQHKHLKHLGKVIIEDDVEIGANTTIDRGRFKHSVVREGSKI 259

>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa} Length = 372

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 33/143 (23%), Positives = 53/143 (37%), Gaps = 46/143 (32%)

Query: 255 VDIHPGAKIGR---GLLFDHA-------TGVVV------------------GETAVIG-- 284
           V I  GA IG    G   +          G V                    +T +IG  
Sbjct: 192 VSIQSGAVIGGEGFGFANEKGVWQKIAQIGGVTIGDDVEIGANTTIDRGALSDT-LIGNG 250

Query: 285 ---DN-VSILHNVTLG-------GTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI 333
              DN + I HNV +G         G +SG    KIG   ++  G  ++G+I+I D   +
Sbjct: 251 VKLDNQIMIAHNVQIGDHTAMAACVG-ISGS--AKIGRHCMLAGGVGLVGHIEICDNVFV 307

Query: 334 GAGSVVLKDVP-PRTTAVGNPAR 355
              ++V + +  P + + G   +
Sbjct: 308 TGMTMVTRSITEPGSYSSGTAMQ 330

>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa} Length = 372

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 16/96 (16%)

Query: 248 RVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP 307
            +S +F       A I       H T  +V   A +  + S+     +            
Sbjct: 107 SLSHLFDRKPKAAAGI-------HPT-AIVAADAEVDPSASVGAYAVIE--------SGA 150

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV 343
           +IG GV +GA   I     IG+G  +     +  DV
Sbjct: 151 RIGAGVSIGAHCVIGARSVIGEGGWLAPRVTLYHDV 186

>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa} Length = 372

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 26/98 (26%), Positives = 34/98 (34%), Gaps = 19/98 (19%)

Query: 255 VDIHPGAKIGRGLLFDHAT----GVVVGETAVIGDNVSILHNVTLGGTG---KMSGDRHP 307
           V I     IG   +          V +     IG  VSI     +GG G           
Sbjct: 156 VSIGAHCVIGARSVIGEGGWLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVWQ 215

Query: 308 K--------IGNGVLVGAGTCI----LGNIKIGDGAKI 333
           K        IG+ V +GA T I    L +  IG+G K+
Sbjct: 216 KIAQIGGVTIGDDVEIGANTTIDRGALSDTLIGNGVKL 253

>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa} Length = 372

 Score = 52.6 bits (127), Expect = 7e-08
 Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 16/83 (19%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           +   A++            V+   A IG  VSI  +                IG   ++G
Sbjct: 128 VAADAEVDPSASVGA--YAVIESGARIGAGVSIGAHCV--------------IGARSVIG 171

Query: 317 AGTCILGNIKIGDGAKIGAGSVV 339
            G  +   + +     IGA   +
Sbjct: 172 EGGWLAPRVTLYHDVTIGARVSI 194

>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli} Length = 341

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 32/143 (22%), Positives = 51/143 (35%), Gaps = 46/143 (32%)

Query: 255 VDIHPGAKIGR---GLLFDHA-------TGVVV------------------GETAVIG-- 284
             I  G  +G    G   D          G V+                   +T +IG  
Sbjct: 170 CLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGALDDT-IIGNG 228

Query: 285 ---DN-VSILHNVTLG-------GTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI 333
              DN   I HNV +G       G   M+G    KIG   ++G  + I G+++I D   +
Sbjct: 229 VIIDNQCQIAHNVVIGDNTAVAGGVI-MAGS--LKIGRYCMIGGASVINGHMEICDKVTV 285

Query: 334 GAGSVVLKDVP-PRTTAVGNPAR 355
               +V++ +  P   + G P +
Sbjct: 286 TGMGMVMRPITEPGVYSSGIPLQ 308

>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli} Length = 341

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 10/83 (12%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I   AK+G  +        V+     +GDNV I     +G        ++ KIG G  + 
Sbjct: 106 IDATAKLGNNVSIGA--NAVIESGVELGDNVIIGAGCFVG--------KNSKIGAGSRLW 155

Query: 317 AGTCILGNIKIGDGAKIGAGSVV 339
           A   I   I+IG    I +G+VV
Sbjct: 156 ANVTIYHEIQIGQNCLIQSGTVV 178

>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli} Length = 341

 Score = 56.5 bits (137), Expect = 4e-09
 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 16/96 (16%)

Query: 248 RVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP 307
           R++++      P   I         +  V+  TA +G+NVSI  N  +            
Sbjct: 85  RMAQILDTTPQPAQNI-------APS-AVIDATAKLGNNVSIGANAVIE--------SGV 128

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV 343
           ++G+ V++GAG  +  N KIG G+++ A   +  ++
Sbjct: 129 ELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEI 164

>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli} Length = 341

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 24/98 (24%), Positives = 33/98 (33%), Gaps = 19/98 (19%)

Query: 255 VDIHPGAKIGRGLLFDHAT----GVVVGETAVIGDNVSILHNVTLGGTG---KMSGDRHP 307
           V I  G  +G+       +     V +     IG N  I     +G  G           
Sbjct: 134 VIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVGADGFGYANDRGNWV 193

Query: 308 K--------IGNGVLVGAGTCI----LGNIKIGDGAKI 333
           K        IG+ V +GA T I    L +  IG+G  I
Sbjct: 194 KIPQIGRVIIGDRVEIGACTTIDRGALDDTIIGNGVII 231

>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* Length = 401

 Score = 56.4 bits (137), Expect = 5e-09
 Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 25/105 (23%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSI------------LHNVTLGGTGKMSGD 304
           I  G+KI       H +   VG+ +VI ++V+                V +   GK    
Sbjct: 300 IMEGSKIP------HLS--YVGD-SVIAEDVNFGAGTLIANLRFDEKEVKVNVKGKRISS 350

Query: 305 RHPK----IGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPP 345
              K    IG  V  G    IL  +KIG  A+I  G+VV +DV  
Sbjct: 351 GRRKLGAFIGGHVRTGINVTILPGVKIGAYARIYPGAVVNRDVGY 395

>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* Length = 401

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 11/101 (10%)

Query: 240 VLALLIQN-RVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGT 298
            + L+ ++ RV  +          IG+           +       +  ++  NV + G 
Sbjct: 187 AINLMAKDHRVKVIEYEGYW--MDIGKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKG- 243

Query: 299 GKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV 339
                     I     + +GT I G + IG G++IG  S +
Sbjct: 244 -------KVIIEEDAEIKSGTYIEGPVYIGKGSEIGPNSYL 277

>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp} Length = 496

 Score = 56.5 bits (136), Expect = 6e-09
 Identities = 14/133 (10%), Positives = 39/133 (29%), Gaps = 27/133 (20%)

Query: 245 IQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGD 304
           +  R   + +  +  G+               +   + +  N    H   +         
Sbjct: 300 VSQRA-YLDNAWMGKGSNAQ------ENC--YII-NSRLERNCVTAHGGKIINA------ 343

Query: 305 RHPKIGNGVLVGAGTCILGN----IKIGDGAKIGAGSVVLK----DVPPRTTAVGNPARL 356
               +G+ +  G  + + G+    +KIGDG  +   +++      ++P      G     
Sbjct: 344 ---HLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTIIDLEEPLEIPAGHLVWGYIRNK 400

Query: 357 IGGKENPFMLDKI 369
                +    ++ 
Sbjct: 401 ADLAAHSISFEEF 413

>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A Length = 334

 Score = 53.7 bits (128), Expect = 3e-08
 Identities = 30/157 (19%), Positives = 58/157 (36%), Gaps = 7/157 (4%)

Query: 202 KERDPACISYAHCLLNFKGFLACQ--AHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHP 259
           +  D A ++++  +   + +         I HR  +    ++     N V       ++ 
Sbjct: 153 QIYDRATVNHSRIVHQVQLYGNATITHAFIEHRAEVFDFALIEGDKDNNVWICDCAKVYG 212

Query: 260 GAKIGRGLLFDHATGV----VVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLV 315
            A++  G   D    +     V E A+I  N  + H+V +GG  ++ G     + + VL+
Sbjct: 213 HARVIAGTEEDAIPTLRYSSQVAEHALIEGNCVLKHHVLVGGHAEVRGGPI-LLDDRVLI 271

Query: 316 GAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGN 352
               CI G I I    +I   + V+          G 
Sbjct: 272 EGHACIQGEILIERQVEISGRAAVIAFDDNTIHLRGP 308

>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A Length = 247

 Score = 52.2 bits (125), Expect = 6e-08
 Identities = 15/108 (13%), Positives = 31/108 (28%), Gaps = 17/108 (15%)

Query: 258 HPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGA 317
               + G  +  +            IG+NVS+ H   + G           +G+   +G 
Sbjct: 118 ETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPA--------AVGDDTFIGM 169

Query: 318 GTCILGNIKIGDG-----AKIGAGSVVL--KDVPPRTTAVGN-PARLI 357
              +    K+G+           G  +   + +P          A  +
Sbjct: 170 QAFVF-KSKVGNNCVLEPRSAAIGVTIPDGRYIPAGMVVTSQAEADKL 216

>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis} Length = 304

 Score = 51.3 bits (122), Expect = 2e-07
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 2/99 (2%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           ++ GA + +G + D  T   VG  A IG NV +   V +GG  +        I +   +G
Sbjct: 155 VNLGAYVDKGAMID--TWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIG 212

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAR 355
           A + ++    + +G+ +G G  + K       A G    
Sbjct: 213 ARSEVVEGCIVREGSVLGMGVFIGKSTKIVDRATGEVFY 251

>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* Length = 456

 Score = 51.0 bits (123), Expect = 3e-07
 Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 52/144 (36%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIG------------DNVSI-----LHNVTLGG 297
           V I    +I     +      +VGE A IG                +     +   T+G 
Sbjct: 301 VVIGNDVEIKP---YSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKKSTVGK 357

Query: 298 TGKMS-----GDRHPKIGNGVLVGAG--TC----------ILGN-------------IKI 327
             K++     GD    IG+   +GAG  TC          I+G+             +K+
Sbjct: 358 GSKVNHLTYVGDSE--IGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKV 415

Query: 328 GDGAKIGAGSVVLKDVPPRTTAVG 351
            +GA IGAG+ + +DV      + 
Sbjct: 416 ANGATIGAGTTITRDVGENELVIT 439

>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* Length = 456

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 10/72 (13%)

Query: 268 LFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKI 327
           ++D A    +  T   G +V I  NV + G        + K+G+ V +G G C+L N+ I
Sbjct: 254 IYDPAR-FDLRGTLEHGKDVEIDVNVIIEG--------NVKLGDRVKIGTG-CVLKNVVI 303

Query: 328 GDGAKIGAGSVV 339
           G+  +I   SV+
Sbjct: 304 GNDVEIKPYSVL 315

>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* Length = 459

 Score = 50.6 bits (122), Expect = 4e-07
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG 351
            IG+ V VG+ T ++  + + +GA IGAG+ V +DV      + 
Sbjct: 399 IIGDDVFVGSDTQLVAPVTVANGATIGAGTTVTRDVAENELVIS 442

>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* Length = 459

 Score = 45.9 bits (110), Expect = 1e-05
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 10/72 (13%)

Query: 268 LFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKI 327
           L D +    +      G +++I  NV + G        H  +G+ V +G G C+L N  I
Sbjct: 257 LLDPSR-FDLRGELTHGRDITIDTNVIIEG--------HVILGDRVRIGTG-CVLKNCVI 306

Query: 328 GDGAKIGAGSVV 339
           GD ++I   +V+
Sbjct: 307 GDDSEISPYTVL 318

>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* Length = 501

 Score = 50.6 bits (122), Expect = 5e-07
 Identities = 20/44 (45%), Positives = 27/44 (61%)

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG 351
            +G+ V  G+ T  +  + IGDGA  GAG+VV +DVPP   AV 
Sbjct: 413 TVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVVREDVPPGALAVS 456

>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* Length = 468

 Score = 50.6 bits (122), Expect = 5e-07
 Identities = 18/44 (40%), Positives = 29/44 (65%)

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG 351
            IG+ V VG+ + I+  +++GD + +GAGS + KDVP    A+G
Sbjct: 404 VIGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIG 447

>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* Length = 468

 Score = 40.2 bits (95), Expect = 9e-04
 Identities = 16/66 (24%), Positives = 22/66 (33%), Gaps = 10/66 (15%)

Query: 268 LFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKI 327
             +      +     I   V I  NV L G          KIG   ++  G   + +  I
Sbjct: 263 FVNPEA-TYIDIDVEIAPEVQIEANVILKG--------QTKIGAETVLTNG-TYVVDSTI 312

Query: 328 GDGAKI 333
           G GA I
Sbjct: 313 GAGAVI 318

>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A Length = 276

 Score = 47.5 bits (112), Expect = 3e-06
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 260 GAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGT 319
           GA +  G + D  T   VG  A IG NV +   V +GG  +        I +   VGA +
Sbjct: 133 GAFVDEGTMVD--TWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVGARS 190

Query: 320 CILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG 351
            ++  + + +G+ I  G  + +         G
Sbjct: 191 EVVEGVIVEEGSVISMGVFIGQSTRIYDRETG 222

>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei} Length = 316

 Score = 47.1 bits (111), Expect = 4e-06
 Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 2/96 (2%)

Query: 260 GAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGT 319
           GA +  G + D  T   VG  A IG NV +   V +GG  +        I +   +GA +
Sbjct: 174 GAYVDEGTMVD--TWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGARS 231

Query: 320 CILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAR 355
            ++  + + + + I  G  + +         G    
Sbjct: 232 EVVEGVIVEENSVISMGVYLGQSTKIYDRETGEVTY 267

>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A Length = 213

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 30/106 (28%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 259 PGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP-KIGNGVLVGA 317
           PG  I R    D  T   +G    I D   ++H +  G      G  +   IG+ V +  
Sbjct: 68  PGTSI-RA---DEGTPFHIGSRTNIQDG-VVIHGLQQGRVIGDDGQEYSVWIGDNVSITH 122

Query: 318 GTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENP 363
              I G   IGDG  IG  S V          V     LI   E P
Sbjct: 123 MALIHGPAYIGDGCFIGFRSTVFNARVGAGCVVMMHV-LIQDVEIP 167

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	388
3mc4_A	287	WW/RSP5/WWP domain:bacterial transferase hexapept	100.0
1ssq_A	267	SAT, serine acetyltransferase; LEFT-handed paralle	100.0
1t3d_A	289	SAT, serine acetyltransferase; LEFT-handed-beta-he	100.0
3f1x_A	310	Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9	100.0
3q1x_A	313	Serine acetyltransferase; cysteine biosynthesis, L	100.0
3ftt_A	199	Putative acetyltransferase sacol2570; galactoside	99.83
1ocx_A	182	Maltose O-acetyltransferase; LEFT-handed parallel	99.81
2p2o_A	185	Maltose transacetylase; GK1921, GKA001001921.1, ge	99.81
3nz2_A	195	Hexapeptide-repeat containing-acetyltransferase; s	99.81
3mqg_A	192	Lipopolysaccharides biosynthesis acetyltransferas;	99.81
3srt_A	188	Maltose O-acetyltransferase; structural genomics,	99.8
3hjj_A	190	Maltose O-acetyltransferase; LEFT-handed beta-heli	99.8
4hur_A	220	Virginiamycin A acetyltransferase; structural geno	99.8
1krr_A	203	Galactoside O-acetyltransferase; LEFT-handed paral	99.79
4ea9_A	220	Perosamine N-acetyltransferase; beta helix, acetyl	99.78
3eev_A	212	Chloramphenicol acetyltransferase; beta-helix, str	99.77
3jqy_B	252	NEUO, polysialic acid O-acetyltransferase; LEFT-ha	99.76
3vbi_A	205	ANTD, galactoside O-acetyltransferase; anthrose, a	99.76
3fs8_A	273	QDTC; acetyltransferase, natural product, deoxysug	99.75
3r8y_A	240	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- ac	99.75
4e8l_A	219	Virginiamycin A acetyltransferase; structural geno	99.73
3bfp_A	194	Acetyltransferase; LEFT-handed beta helix, COA bin	99.73
2wlg_A	215	Polysialic acid O-acetyltransferase; enzyme, LEFT-	99.73
3q1x_A	313	Serine acetyltransferase; cysteine biosynthesis, L	99.72
3tv0_A	194	Dynactin subunit 6; LEFT-handed beta-helix, ARP11,	99.71
3gos_A	276	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su	99.7
1mr7_A	209	Streptogramin A acetyltransferase; LEFT-handed par	99.69
3r0s_A	266	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	99.69
3hsq_A	259	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosam	99.69
3r3r_A	187	Ferripyochelin binding protein; structural genomic	99.69
3r1w_A	189	Carbonic anhydrase; beta-helix, lyase; 1.73A {Unid	99.69
1xat_A	212	Xenobiotic acetyltransferase; chloramphenicol, LEF	99.68
3t57_A	305	UDP-N-acetylglucosamine O-acyltransferase domain-	99.68
3tk8_A	316	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su	99.68
1ssq_A	267	SAT, serine acetyltransferase; LEFT-handed paralle	99.68
4eqy_A	283	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	99.67
1xhd_A	173	Putative acetyltransferase/acyltransferase; struct	99.67
3eg4_A	304	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su	99.67
4e6u_A	265	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	99.67
3mc4_A	287	WW/RSP5/WWP domain:bacterial transferase hexapept	99.67
2qia_A	262	UDP-N-acetylglucosamine acyltransferase; LEFT-hand	99.66
3ixc_A	191	Hexapeptide transferase family protein; niaid, ssg	99.66
1j2z_A	270	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	99.66
3f1x_A	310	Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9	99.66
1t3d_A	289	SAT, serine acetyltransferase; LEFT-handed-beta-he	99.64
1v3w_A	173	Ferripyochelin binding protein; beta-helix, carbon	99.64
4fce_A	459	Bifunctional protein GLMU; GLMU. csgid, niaid, str	99.64
3eh0_A	341	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltr	99.63
2v0h_A	456	Bifunctional protein GLMU; cell WALL, magnesium, c	99.62
2iu8_A	374	LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a	99.62
3pmo_A	372	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr;	99.62
4e79_A	357	UDP-3-O-acylglucosamine N-acyltransferase; lipopol	99.59
1hm9_A	468	GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr	99.58
3kwd_A	213	Carbon dioxide concentrating mechanism protein; LE	99.53
4ea9_A	220	Perosamine N-acetyltransferase; beta helix, acetyl	99.49
3st8_A	501	Bifunctional protein GLMU; acetyltransferase, pyro	99.49
3bfp_A	194	Acetyltransferase; LEFT-handed beta helix, COA bin	99.49
3fsy_A	332	Tetrahydrodipicolinate N-succinyltransferase; beta	99.47
2ggo_A	401	401AA long hypothetical glucose-1-phosphate thymid	99.47
3vbi_A	205	ANTD, galactoside O-acetyltransferase; anthrose, a	99.44
3mqg_A	192	Lipopolysaccharides biosynthesis acetyltransferas;	99.43
3r5d_A	347	Tetrahydrodipicolinate N-succinyletransferase; 1.8	99.42
3eh0_A	341	UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltr	99.41
4e79_A	357	UDP-3-O-acylglucosamine N-acyltransferase; lipopol	99.41
4eqy_A	283	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	99.4
3r8y_A	240	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- ac	99.39
1qre_A	247	Carbonic anhydrase; beta-helix, lyase; 1.46A {Meth	99.39
3pmo_A	372	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr;	99.39
3hsq_A	259	Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosam	99.38
3r0s_A	266	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	99.37
4e6u_A	265	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	99.37
1j2z_A	270	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam	99.36
3r1w_A	189	Carbonic anhydrase; beta-helix, lyase; 1.73A {Unid	99.34
3r3r_A	187	Ferripyochelin binding protein; structural genomic	99.33
3ixc_A	191	Hexapeptide transferase family protein; niaid, ssg	99.32
2qia_A	262	UDP-N-acetylglucosamine acyltransferase; LEFT-hand	99.32
3ftt_A	199	Putative acetyltransferase sacol2570; galactoside	99.32
2rij_A	387	Putative 2,3,4,5-tetrahydropyridine-2-carboxylate	99.31
3srt_A	188	Maltose O-acetyltransferase; structural genomics,	99.3
2v0h_A	456	Bifunctional protein GLMU; cell WALL, magnesium, c	99.3
3fs8_A	273	QDTC; acetyltransferase, natural product, deoxysug	99.29
3hjj_A	190	Maltose O-acetyltransferase; LEFT-handed beta-heli	99.29
3nz2_A	195	Hexapeptide-repeat containing-acetyltransferase; s	99.27
3c8v_A	496	Putative acetyltransferase; YP_390128.1, structura	99.27
3eg4_A	304	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su	99.26
3gos_A	276	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su	99.24
1ocx_A	182	Maltose O-acetyltransferase; LEFT-handed parallel	99.24
1krr_A	203	Galactoside O-acetyltransferase; LEFT-handed paral	99.24
3tk8_A	316	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su	99.23
1hm9_A	468	GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr	99.23
3kwd_A	213	Carbon dioxide concentrating mechanism protein; LE	99.22
2ggo_A	401	401AA long hypothetical glucose-1-phosphate thymid	99.22
3t57_A	305	UDP-N-acetylglucosamine O-acyltransferase domain-	99.22
2p2o_A	185	Maltose transacetylase; GK1921, GKA001001921.1, ge	99.21
2iu8_A	374	LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a	99.2
4fce_A	459	Bifunctional protein GLMU; GLMU. csgid, niaid, str	99.18
3r5d_A	347	Tetrahydrodipicolinate N-succinyletransferase; 1.8	99.17
1xhd_A	173	Putative acetyltransferase/acyltransferase; struct	99.15
1qre_A	247	Carbonic anhydrase; beta-helix, lyase; 1.46A {Meth	99.13
3jqy_B	252	NEUO, polysialic acid O-acetyltransferase; LEFT-ha	99.13
2wlg_A	215	Polysialic acid O-acetyltransferase; enzyme, LEFT-	99.12
3fsy_A	332	Tetrahydrodipicolinate N-succinyltransferase; beta	99.1
1v3w_A	173	Ferripyochelin binding protein; beta-helix, carbon	99.1
4hur_A	220	Virginiamycin A acetyltransferase; structural geno	99.08
3tv0_A	194	Dynactin subunit 6; LEFT-handed beta-helix, ARP11,	99.08
2pig_A	334	Putative transferase; SCR6, NESG, YDCK, structural	98.9
3c8v_A	496	Putative acetyltransferase; YP_390128.1, structura	98.89
3eev_A	212	Chloramphenicol acetyltransferase; beta-helix, str	98.89
3brk_X	420	Glucose-1-phosphate adenylyltransferase; ADP-gluco	98.85
4e8l_A	219	Virginiamycin A acetyltransferase; structural geno	98.82
1yp2_A	451	Glucose-1-phosphate adenylyltransferase small subu	98.79
1yp2_A	451	Glucose-1-phosphate adenylyltransferase small subu	98.74
3st8_A	501	Bifunctional protein GLMU; acetyltransferase, pyro	98.73
2rij_A	387	Putative 2,3,4,5-tetrahydropyridine-2-carboxylate	98.73
1mr7_A	209	Streptogramin A acetyltransferase; LEFT-handed par	98.61
1xat_A	212	Xenobiotic acetyltransferase; chloramphenicol, LEF	98.55
2pig_A	334	Putative transferase; SCR6, NESG, YDCK, structural	98.54
3brk_X	420	Glucose-1-phosphate adenylyltransferase; ADP-gluco	98.38

>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.4e-52  Score=406.85  Aligned_cols=255  Identities=47%  Similarity=0.759  Sum_probs=232.6

Q ss_pred             CchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHhhhcHHHHHHHHHH
Q 047635          118 ADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKAD  197 (388)
Q Consensus       118 ~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l~~~p~i~~~i~~D  197 (388)
                      ..+++|++||+||+..+++||+|++||+..||+|++|+++|+++||+||.+..++...+++++.+++...|++++.+.+|
T Consensus        28 ~~~~~w~~~~~ea~~~~~~ep~l~~~~~~~~l~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~d  107 (287)
T 3mc4_A           28 QVDPIWHSIRAEAEEATRNDPVLGAFLYATILNQPSLEEAVMHRIAERLGHPDVSADILRQTFDTMLEANPEWSHVLRVD  107 (287)
T ss_dssp             GCCHHHHHHHHHHHHHHHHCGGGHHHHHHHTTTCSSHHHHHHHHHHHHHCCSSSCHHHHHHHHHHHHHHCTTHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHhhCcHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEEcCCCCcEE
Q 047635          198 LIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVV  277 (388)
Q Consensus       198 l~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I~~gtgVvI  277 (388)
                      +.+++++||++.++..++++|+||++++.||++|++|..+...++.+++......++++||++++||++++|+|+++++|
T Consensus       108 ~~~~~~~DPa~~~~~e~ll~y~G~~al~~yRiah~L~~~g~~~la~~i~~~~~~~~gi~I~p~a~IG~~v~I~hg~gvvI  187 (287)
T 3mc4_A          108 IQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGRKDFAYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVV  187 (287)
T ss_dssp             HHHHHHHCTTCCCTHHHHHHCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCEECTTCEECSSCEEESCTTCEE
T ss_pred             HHHHhccCcccCCCCEEEEeCHHHHHHHHHHHHHHHHHcCChhHHHHHHhhceeccCeEECCCCEECCCeEEccCCCeEE
Confidence            99999999999999999999999999999999999999999999999988888889999999999999999999999999


Q ss_pred             CCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEe
Q 047635          278 GETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI  357 (388)
Q Consensus       278 G~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi  357 (388)
                      |++++||+||+|+++|+|++++...+.++++||++|+||+||+|+++++||++|+||+|++|.+|||++++++|+|||++
T Consensus       188 G~~~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG~~a~IGagsvV~kdVp~~svvvG~PAkii  267 (287)
T 3mc4_A          188 GETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLKSVPHNVTVAGVPARII  267 (287)
T ss_dssp             CTTCEECSSCEEETTCEEEC-----CCCSCEECTTCEECTTCEEESSCEECTTCEECTTCEECSCBCTTEEEETTTTEEE
T ss_pred             CCCeEECCCCEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEECCCCEECCCCEEccccCCCCEEEccCCEEe
Confidence            99999999999999999999888888889999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCccccCCCCcccccc
Q 047635          358 GGKENPFMLDKIPSFTMDHT  377 (388)
Q Consensus       358 ~~~~~~~~~~~~p~~~~~~~  377 (388)
                      ++..     ...|+..|+|.
T Consensus       268 ~~~~-----~~~p~~~~d~~  282 (287)
T 3mc4_A          268 GETG-----CTEPSRVMDQM  282 (287)
T ss_dssp             EECC----------------
T ss_pred             CcCC-----CcCcchhhhhh
Confidence            8765     56788899885

>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*

Probab=100.00  E-value=8.8e-52  Score=398.15  Aligned_cols=254  Identities=48%  Similarity=0.789  Sum_probs=232.7

Q ss_pred             chHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHhhhcHHHHHHHHHHH
Q 047635          119 DVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADL  198 (388)
Q Consensus       119 ~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l~~~p~i~~~i~~Dl  198 (388)
                      .+++|++||+||+..+++||+|++||+..||+|++|+++|+++|+++|.+..+++..+++++.++++.+|++++.+.+|+
T Consensus         2 ~~~~w~~~~~ea~~~~~~EP~L~~~l~~~IL~~~~l~~aLa~~la~kl~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~D~   81 (267)
T 1ssq_A            2 NLDVWQHIRQEAKELAENEPMLASFFHSTILKHQNLGGALSYLLANKLANPIMPAISLREIIEEAYQSNPSIIDCAACDI   81 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTTSSSHHHHHHHHHHHHHCBTTBCHHHHHHHHHHHHHHCTHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhcCCHHHHHhcccccCCCCHHHHHHHHHhccCCCccCCHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEEcCCCCcEEC
Q 047635          199 IAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVG  278 (388)
Q Consensus       199 ~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I~~gtgVvIG  278 (388)
                      .+.+++||++.+...++++|+||++++.||++|++|..++..++.+++......++++||++++||++++|+|+++++||
T Consensus        82 ~~~~~~DPa~~~~~~~l~~~~g~~al~~yR~ah~l~~~~~~~l~~~l~~~~~~~~g~~I~p~a~IG~g~~I~~~~~vvIG  161 (267)
T 1ssq_A           82 QAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSLALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVG  161 (267)
T ss_dssp             HHHHHHCTTCCCTHHHHHHCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHSCEECTTCEECSSCEESSCTTCEEC
T ss_pred             HHHHcCChhhhcccHHHhhhchHHHHHHHHHHHHHHHhHHHHHHHHHHHhceeccceEeCCCCEECCCEEECCCCceEEC
Confidence            99999999999999999999999999999999999999999888888887777899999999999999999999999999


Q ss_pred             CCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEec
Q 047635          279 ETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG  358 (388)
Q Consensus       279 ~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~  358 (388)
                      ++++||+||+|+++|+|++++...+.++++||++|+||+||+|+++++||++|+||+|++|.+|||++++++|+|||+++
T Consensus       162 ~~~~IG~~v~I~~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~gv~IG~~a~IGagsvV~~dVp~~~~v~G~PAr~i~  241 (267)
T 1ssq_A          162 ETSVIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIVS  241 (267)
T ss_dssp             TTCEECTTCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEECTTCEECSCBCTTCEEETTTTEECC
T ss_pred             CeeEECCCCEEcCCcEECCCcccCCCCCeEECCCeEEcCCCEEeCCcEECCCCEECCCCEEccCCCCCCEEEecCcEEec
Confidence            99999999999999999998877778899999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCccccCCCCcccccc
Q 047635          359 GKENPFMLDKIPSFTMDHT  377 (388)
Q Consensus       359 ~~~~~~~~~~~p~~~~~~~  377 (388)
                      +..     ...|+.+|||.
T Consensus       242 ~~~-----~~~~~~~~~~~  255 (267)
T 1ssq_A          242 QDK-----AAKPAFDMNQY  255 (267)
T ss_dssp             -------------------
T ss_pred             cCC-----CCCCccchhhh
Confidence            765     56789999986

>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6

Probab=100.00  E-value=1.9e-51  Score=399.53  Aligned_cols=257  Identities=53%  Similarity=0.822  Sum_probs=244.4

Q ss_pred             hHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHhhhcHHHHHHHHHHHH
Q 047635          120 VDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLI  199 (388)
Q Consensus       120 ~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l~~~p~i~~~i~~Dl~  199 (388)
                      +.+|++||+||+..+++||+|++||+..||+|++|+++|+++|+++|.+..+++..+++++.++++.+|++++.+.+|+.
T Consensus        23 ~~~w~~~~~ea~~~~~~EP~L~~~l~~~IL~~~~l~~aLa~~La~kl~~~~~~~~~~~~~~~~~~~~~P~i~~~i~~D~~  102 (289)
T 1t3d_A           23 EIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQ  102 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHHHHTTTCSSHHHHHHHHHHHHHCCSSSCHHHHHHHHHHHHHHCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCHHHHHhcccccCCCCHHHHHHHHHhccCCcccCCHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            46999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEEcCCCCcEECC
Q 047635          200 AIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGE  279 (388)
Q Consensus       200 a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~  279 (388)
                      +++++||++.+...++++|+||++++.||++|++|..++..++.++.......++++|+++++||++++|+++++++||+
T Consensus       103 ~~~~~DPa~~~~~~~l~~~~G~~al~~yR~ah~l~~~~r~~l~~~l~~~~~~~~g~~I~p~a~IG~gv~I~~g~gvvIG~  182 (289)
T 1t3d_A          103 AVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGE  182 (289)
T ss_dssp             HHHHHCTTCCCSHHHHHHCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCEECTTCEECSSCEECSCTTCEECT
T ss_pred             HHHcCCHhHhcccHHHhhcccHHHHHHHHHHHHHHHcChHHHHHHHHHhceeccceEEcCCCEEcCCEEECCCCceEECC
Confidence            99999999999999999999999999999999999999999988888877778999999999999999999999999999


Q ss_pred             CcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          280 TAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       280 ~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      +++||+||+|+++|+|++++...+.++++|||+|+||+||+|+++++||++|+||+|++|.+|||++++++|+|||++++
T Consensus       183 ~~~IG~~v~I~~gvtLg~~~~~~~~~~~~IGd~v~IGaga~Ilggv~IG~~a~IGagsvV~~dVp~~s~v~G~PAr~i~~  262 (289)
T 1t3d_A          183 TAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGK  262 (289)
T ss_dssp             TCEECSSCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEECTTCEECSCBCTTCEEETTTTEEEEC
T ss_pred             CcEECCCCEEcCCcEECCCccccCCCCeEECCCeEECCCCEEecCcEECCCCEECCCCEEccCCCCCCEEEecCCEEeCc
Confidence            99999999999999999987777778999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCccccCCCCcccccccccc
Q 047635          360 KENPFMLDKIPSFTMDHTSHIH  381 (388)
Q Consensus       360 ~~~~~~~~~~p~~~~~~~~~~~  381 (388)
                      ..     ...|+.+|||...+.
T Consensus       263 ~~-----~~~p~~~~~~~~~~~  279 (289)
T 1t3d_A          263 PD-----SDKPSMDMDQHFNGI  279 (289)
T ss_dssp             CS-----SSCHHHHCCCCCCC-
T ss_pred             CC-----CCCCCcccchhcccc
Confidence            65     567888999875543

>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}

Probab=100.00  E-value=5.1e-34  Score=279.62  Aligned_cols=189  Identities=31%  Similarity=0.457  Sum_probs=170.2

Q ss_pred             hHHHHHHHHHHhhhcHHHHHHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhcccee
Q 047635          173 SGTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEV  252 (388)
Q Consensus       173 ~~~l~~~~~~~l~~~p~i~~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~  252 (388)
                      .....+++.++++..|++++.+.+|+.+++++||++.+...++++|+||++++.||++|++|..+...++.++.......
T Consensus       109 ~~~~~~~~~~~~~~~p~i~~~l~~di~~~~~~DPa~~s~~e~l~~ypg~~al~~~Riah~l~~~~~~~lar~i~~~~~~~  188 (310)
T 3f1x_A          109 RETASLLAARFISKLPELRRILATDVEAAYYGDPAATCFGEIISCYPAIRAISNYRIAHELLILGVPLIPRFITEMAHSE  188 (310)
T ss_dssp             HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTCCCHHHHHHHCHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCCchhcCcceEEEeCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccc
Confidence            45677889999999999999999999999999999999999999999999999999999999999988888888888888


Q ss_pred             eeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCcc---------CCCCCCEECCCcEEccCCEECC
Q 047635          253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKM---------SGDRHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i---------~g~~~~~IGd~V~IGaga~Ilg  323 (388)
                      ++++||++++||++++|+|+++++||++++||+||.|+++|+|++.+..         ...++++||++|+||+||+|++
T Consensus       189 ~gv~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga~Il~  268 (310)
T 3f1x_A          189 TGIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNATILG  268 (310)
T ss_dssp             HSCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEECC--------------CCSCEECTTCEECTTCEEES
T ss_pred             CCcEECCCCEECCCcEECCCCCeEECCceEEcCCCEECCCCEECCCccccccccccccCCCCCCEECCCcEEcCCCEECC
Confidence            9999999999999999999999999999999999999999999987622         2346789999999999999999


Q ss_pred             CcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          324 NIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                      +++||++|+||+|++|.+|||++++|+|+||+..+.+.
T Consensus       269 gv~IGd~a~IGagsvV~~dVp~~svv~GnPAk~~~~~~  306 (310)
T 3f1x_A          269 RVTIGKGATVGGNIWVTENVPAGSRIVQRKNKDELEHH  306 (310)
T ss_dssp             SCEECTTCEECSSCEECSCBCTTCEECCCCCC------
T ss_pred             CcEECCCCEECCCCEECCccCCCcEEECCCcccCCccc
Confidence            99999999999999999999999999999999987654

>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A

Probab=100.00  E-value=4.3e-34  Score=280.59  Aligned_cols=188  Identities=34%  Similarity=0.513  Sum_probs=164.3

Q ss_pred             HHHHHHHHHHhhhcHHHHHHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceee
Q 047635          174 GTLFELFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVF  253 (388)
Q Consensus       174 ~~l~~~~~~~l~~~p~i~~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~  253 (388)
                      ....+++.++++..|++++.+.+|+.+++++||++.+...++++|+||++++.||++|++|..+...++.++.......+
T Consensus        83 ~~~~~~~~~~~~~~pei~~~l~~d~~~~~~~DPa~~~~~e~l~~ypG~~al~~yRlah~L~~~~~~~l~r~l~~~~~~~~  162 (313)
T 3q1x_A           83 LFAHQCVMAILEKLPSIKRTLKTDLIAAYAGDPAAPGLSLIIRCYPGFQAVIVYRIAHVLYECGERYYCREMMESVHSYT  162 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHCHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhCHHHHHHHHHHHHHHHcCCccccCCCeeEEeCcCHHHHHHHHHHHHHHHcCChhHHHHHHHhceecC
Confidence            45677888999999999999999999999999999999999999999999999999999999999888888888888889


Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCC--------CCCCEECCCcEEccCCEECCCc
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSG--------DRHPKIGNGVLVGAGTCILGNI  325 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g--------~~~~~IGd~V~IGaga~Ilg~V  325 (388)
                      +++||++++||++++|+++++++||++++||+||+|+++|+||++..+..        .++++|||+|+||+||+|++++
T Consensus       163 gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilggv  242 (313)
T 3q1x_A          163 SIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNI  242 (313)
T ss_dssp             CCEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEESSC
T ss_pred             CeEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEECCCc
Confidence            99999999999999999999999999999999999999999998654321        3578999999999999999999


Q ss_pred             EECCCCEECCCCEECCCCCCCcEEE--ecCcEEeccCC
Q 047635          326 KIGDGAKIGAGSVVLKDVPPRTTAV--GNPARLIGGKE  361 (388)
Q Consensus       326 ~IGd~v~IGagsVV~~dVp~~s~Vv--G~PArvi~~~~  361 (388)
                      +||++|+||+|++|++|||++++++  |+||+++++..
T Consensus       243 ~IG~~a~IGagsvV~~dVp~gs~vvi~G~PAkvik~~~  280 (313)
T 3q1x_A          243 IVGSHVRIGANCWIDRDVDSNQTVYISEHPTHFVKPCT  280 (313)
T ss_dssp             EECSSEEECTTCEECSCBCSSEEC--------------
T ss_pred             EECCCCEECCCCEECCCcCCCCEEEEcCCCcEEEeeCc
Confidence            9999999999999999999999998  99999998654

>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A

Probab=99.83  E-value=2.9e-20  Score=170.57  Aligned_cols=106  Identities=31%  Similarity=0.486  Sum_probs=77.5

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECC--CcEECCCcEEcCCCEECCCCccC----------CCCCCEECCCcEEccCCEE
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGE--TAVIGDNVSILHNVTLGGTGKMS----------GDRHPKIGNGVLVGAGTCI  321 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~--~~~IGdnV~Ig~gvtIgg~~~i~----------g~~~~~IGd~V~IGaga~I  321 (388)
                      .+++|.++.||++++|+.  +++|++  .++||++|.|+++|+|.......          ...+++|||+|+||++|+|
T Consensus        68 ~~~~g~~~~IG~~~~I~~--~~~i~~~~~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I  145 (199)
T 3ftt_A           68 DTDYGWNVKLGKNVYVNT--NCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAV  145 (199)
T ss_dssp             EESSSTTEEECSSEEECT--TEEEECSSCEEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSEEECTTCEE
T ss_pred             EEEecCCcEECCCeEECC--CeEEecCCEEEECCCCEECCCCEEecCCCcCccccccccceecCCeEEcCCcEEcCCCEE
Confidence            344455555566555555  444422  24555555555555553221100          0236799999999999999


Q ss_pred             CCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          322 LGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       322 lg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                      +++++||++|+||+||+|++|||++++++|+|||++++..
T Consensus       146 ~~gv~IG~~~vIgagsvV~~dvp~~~v~~G~Pak~i~~~~  185 (199)
T 3ftt_A          146 LPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVRKID  185 (199)
T ss_dssp             CTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEECC
T ss_pred             CCCCEECCCCEECCCCEECcccCCCCEEEEECCEEEeeCC
Confidence            9999999999999999999999999999999999998765

>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3

Probab=99.81  E-value=3.5e-20  Score=168.33  Aligned_cols=105  Identities=30%  Similarity=0.419  Sum_probs=82.1

Q ss_pred             eeeEecCCcEECCceEEcCCCCcEEC--CCcEECCCcEEcCCCEECCCCcc----------CCCCCCEECCCcEEccCCE
Q 047635          253 FSVDIHPGAKIGRGLLFDHATGVVVG--ETAVIGDNVSILHNVTLGGTGKM----------SGDRHPKIGNGVLVGAGTC  320 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gtgVvIG--~~~~IGdnV~Ig~gvtIgg~~~i----------~g~~~~~IGd~V~IGaga~  320 (388)
                      +.++++.++.||++++|.+  +++|.  ..++||++|.|+++|+|......          ....+++||++||||+||+
T Consensus        65 ~~~~~g~~v~IG~~~~I~~--~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~  142 (182)
T 1ocx_A           65 FRCDYGYNIFLGNNFFANF--DCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAV  142 (182)
T ss_dssp             EEESSSTTEEECSSEEECS--SEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCE
T ss_pred             EEEEeCCCEEECCCcEEeC--CeEEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCE
Confidence            3455667777777777766  55553  34677777777777777432110          0023689999999999999


Q ss_pred             ECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          321 ILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       321 Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      |+++++||++|+||+||+|.+|||++++++|+|||++++
T Consensus       143 I~~gv~IG~~~vIgagsvV~~dip~~~vv~G~Pa~~i~~  181 (182)
T 1ocx_A          143 INPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARIIKK  181 (182)
T ss_dssp             ECTTCEECTTCEECTTCEECSCBCSSEEEETTTTEEEEE
T ss_pred             ECCCcEECCCCEECCCCEECCcCCCCcEEEccccEEecc
Confidence            999999999999999999999999999999999999974

>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A

Probab=99.81  E-value=1.1e-19  Score=165.45  Aligned_cols=104  Identities=29%  Similarity=0.388  Sum_probs=80.9

Q ss_pred             eeEecCCcEECCceEEcCCCCcEEC--CCcEECCCcEEcCCCEECCCCcc----------CCCCCCEECCCcEEccCCEE
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVG--ETAVIGDNVSILHNVTLGGTGKM----------SGDRHPKIGNGVLVGAGTCI  321 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG--~~~~IGdnV~Ig~gvtIgg~~~i----------~g~~~~~IGd~V~IGaga~I  321 (388)
                      .++++.++.||++++|+.  +++|.  ..++||++|.|+++|+|....+.          .-..+++|||+||||++|+|
T Consensus        68 ~~~~g~~v~IG~~~~i~~--~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I  145 (185)
T 2p2o_A           68 RCDYGYNIHVGENFFMNF--DGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVI  145 (185)
T ss_dssp             EESCSTTEEECTTEEECS--SEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEE
T ss_pred             EEEecCCEEECCeeEEcC--CeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEE
Confidence            455667777777777766  55553  44667777777777766432110          00236899999999999999


Q ss_pred             CCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          322 LGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       322 lg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      +++++||++|+||+||+|++|||++++++|+|||++++
T Consensus       146 ~~gv~IG~~~vIgagsvV~~~vp~~~vv~G~Pa~vi~~  183 (185)
T 2p2o_A          146 NPGVTIGDNAVIASGAVVTKDVPANAVVGGNPAKVIKW  183 (185)
T ss_dssp             CTTCEECTTCEECTTCEECSCBCTTEEEEETTEEEEEE
T ss_pred             CCCCEECCCCEECCCCEECCCCCCCcEEEcccCEEeee
Confidence            99999999999999999999999999999999999975

>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*

Probab=99.81  E-value=9.7e-20  Score=166.61  Aligned_cols=107  Identities=26%  Similarity=0.355  Sum_probs=80.6

Q ss_pred             eeEecCCcEECCceEEcCCCCcEEC--CCcEECCCcEEcCCCEECCCCccC----------CCCCCEECCCcEEccCCEE
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVG--ETAVIGDNVSILHNVTLGGTGKMS----------GDRHPKIGNGVLVGAGTCI  321 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG--~~~~IGdnV~Ig~gvtIgg~~~i~----------g~~~~~IGd~V~IGaga~I  321 (388)
                      .+++|.++.||++++|++  +++|+  ..++||++|.|+++|+|.......          -..+++|||+|+||+||+|
T Consensus        70 ~~~ig~~v~IG~~~~I~~--~~~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I  147 (195)
T 3nz2_A           70 HCEFGKTIRIGDHTFINM--NVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVI  147 (195)
T ss_dssp             EESCSTTEEECTTCEECT--TEEEECSSCEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECTTCEECTTCEE
T ss_pred             EEEeCCCeEECCCcEECc--CCEEecCceEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECCCCEEcCCCEE
Confidence            455666666666666665  55552  334666666666666654422111          1135799999999999999


Q ss_pred             CCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCCC
Q 047635          322 LGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       322 lg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~  362 (388)
                      +++++||++|+||+||+|++|||++++++|+|||++++..+
T Consensus       148 ~~gv~IG~~~vIgagsvV~~dvp~~~v~~G~Pa~~i~~~~~  188 (195)
T 3nz2_A          148 NQGVTIGARSVVAANSVVNQDVPPDTLVGGTPARILRSLKD  188 (195)
T ss_dssp             CTTCEECTTCEECTTCEECSCBCSSEEEETTTTEEEEECC-
T ss_pred             CCCCEECCCCEECCCCEEccccCCCcEEEccCCEEecccCh
Confidence            99999999999999999999999999999999999987653

>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*

Probab=99.81  E-value=2.2e-19  Score=162.45  Aligned_cols=107  Identities=33%  Similarity=0.460  Sum_probs=80.8

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCC-------------------CCCCEECCCcE
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSG-------------------DRHPKIGNGVL  314 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g-------------------~~~~~IGd~V~  314 (388)
                      ++.||+++.||.++.|.+  +++||+++.|+++|.|+++++|+++..+..                   ..+++||++|+
T Consensus        33 ~~~IG~~~~Ig~~~~I~~--~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~v~  110 (192)
T 3mqg_A           33 GAEIGEGCSLGQNVFVGN--RVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNVYNPRAAIERKSEYRDTIVRQGAT  110 (192)
T ss_dssp             TCEECTTCEECTTCEECS--SCEECSSCEECTTCEECTTEEECTTCEECTTCBCCSCSSCBTTBCCGGGCCCEEECTTCE
T ss_pred             CcEECCCCEECCCEEECC--ceEECCCcEEcCCcEEeCCCEECCCCEECCceEEecccCCccccccccccCCcEECCCcE
Confidence            345555555555555544  566666666666666655555555443321                   14589999999


Q ss_pred             EccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCCC
Q 047635          315 VGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       315 IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~  362 (388)
                      ||++++|+++++||++|+||+|++|.+|+|++++++|+|||++++...
T Consensus       111 IG~~~~I~~g~~Ig~~~~IgagsvV~~~vp~~~v~~G~PAk~i~~~~~  158 (192)
T 3mqg_A          111 LGANCTVVCGATIGRYAFVGAGAVVNKDVPDFALVVGVPARQIGWMSR  158 (192)
T ss_dssp             ECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEEBCT
T ss_pred             ECCCCEECCCCEECCCCEEcCCCEECcccCCCCEEEccCCEEEEeecc
Confidence            999999999999999999999999999999999999999999987554

>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*

Probab=99.80  E-value=1.8e-20  Score=170.51  Aligned_cols=104  Identities=38%  Similarity=0.529  Sum_probs=74.6

Q ss_pred             eEecCCcEECCceEEcCCCCcEECC--CcEECCCcEEcCCCEECCCCccC----------CCCCCEECCCcEEccCCEEC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGE--TAVIGDNVSILHNVTLGGTGKMS----------GDRHPKIGNGVLVGAGTCIL  322 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~--~~~IGdnV~Ig~gvtIgg~~~i~----------g~~~~~IGd~V~IGaga~Il  322 (388)
                      +++|.++.||++++|+.  +++|.+  .++||++|.|+++|+|.......          -..+++||++|+||+||+|+
T Consensus        71 ~~~g~~~~IG~~~~i~~--~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~  148 (188)
T 3srt_A           71 CDYGYNIHVGENFFANY--DCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIIT  148 (188)
T ss_dssp             ESSSTTEEECTTEEECT--TEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEEC
T ss_pred             EEeCCCeEECCcccccC--ceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEEC
Confidence            33445555555555554  444433  23555555555555553211110          01368999999999999999


Q ss_pred             CCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccC
Q 047635          323 GNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGK  360 (388)
Q Consensus       323 g~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~  360 (388)
                      ++++||++|+||+|++|++|||++++++|+|||++++.
T Consensus       149 ~gv~IG~~~vIgagsvV~~dvp~~~v~~G~Pa~vi~~i  186 (188)
T 3srt_A          149 PGITIGDNVVIGAGSVVTKDIPPNTVAVGNPCRVIKKI  186 (188)
T ss_dssp             TTCEECSSEEECTTCEECSCBCSSEEEETTTTEEEEEC
T ss_pred             CCcEECCCCEECCCCEECcccCCCCEEEccCCEEeccC
Confidence            99999999999999999999999999999999999865

>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*

Probab=99.80  E-value=8.1e-19  Score=159.57  Aligned_cols=106  Identities=32%  Similarity=0.464  Sum_probs=80.8

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECC--CcEECCCcEEcCCCEECCCCccCC----------CCCCEECCCcEEccCCEE
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGE--TAVIGDNVSILHNVTLGGTGKMSG----------DRHPKIGNGVLVGAGTCI  321 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~--~~~IGdnV~Ig~gvtIgg~~~i~g----------~~~~~IGd~V~IGaga~I  321 (388)
                      .+++|.++.||++++|+.  +++|++  .++||++|.|+++|+|........          ..+++||++|+||++|+|
T Consensus        72 ~~~~g~~v~IG~~~~I~~--~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I  149 (190)
T 3hjj_A           72 RCDYGYNIHVGKSFFANF--NCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAII  149 (190)
T ss_dssp             EESSSTTEEECTTCEECT--TCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEE
T ss_pred             EEEeCCceEECCceeeCC--CeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEE
Confidence            344556666666666665  555554  446666666666666643221110          235799999999999999


Q ss_pred             CCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          322 LGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       322 lg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                      .++++||++|+||+||+|.+|||++++++|+|||++++..
T Consensus       150 ~~gv~IG~~~vIgagsvV~~dvp~~~v~~G~Pa~~i~~~~  189 (190)
T 3hjj_A          150 NPGVSIGDNAVIASGAVVTKDVPNNVVVGGNPAKVIKTIE  189 (190)
T ss_dssp             CTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEECC
T ss_pred             CCCCEECCCCEECCCCEECcccCCCCEEEccCCEEeccCC
Confidence            9999999999999999999999999999999999998753

>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A

Probab=99.80  E-value=7.8e-20  Score=170.08  Aligned_cols=106  Identities=31%  Similarity=0.427  Sum_probs=80.4

Q ss_pred             eeEecCCcEECCceEE-------------cCCCCcEECCCcEECCCcEEcCCCEEC---CCCccC---------------
Q 047635          254 SVDIHPGAKIGRGLLF-------------DHATGVVVGETAVIGDNVSILHNVTLG---GTGKMS---------------  302 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I-------------~~gtgVvIG~~~~IGdnV~Ig~gvtIg---g~~~i~---------------  302 (388)
                      .+.+++++.||++++|             ++  +++||++++||++|+|+++|+|.   ++..+.               
T Consensus        29 ~~v~~~~v~IG~~t~i~~~~~~~~~~~vI~~--~~~Ig~~v~IG~~~~Ig~~v~i~~~g~~~~~~~~~~~~~~~~~~~~~  106 (220)
T 4hur_A           29 PTITNENILVGEYSYYDSKRGESFEDQVLYH--YEVIGDKLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEK  106 (220)
T ss_dssp             GGCCSTTEEECTTCEEECSSSCCGGGGEESC--CTTTCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGG
T ss_pred             ceEECCCEEECCCeEECCcCCcccCCeEEeC--CCEECCCeEECCCCEECCCCEEEECCCCcccCCcceeeeeecccccc
Confidence            4456666666666665             33  45556666777777777777651   111111               


Q ss_pred             ---------CCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          303 ---------GDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       303 ---------g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                               ...+++||++|+||+||+|+++++||++|+||+||+|.+|||++++++|+|||+++++.
T Consensus       107 ~~~~~~~~~~~g~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~dVp~~~vv~G~PAk~ir~r~  174 (220)
T 4hur_A          107 YMPSLKDLPLKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYSIVGGNPLKFIRKRF  174 (220)
T ss_dssp             GCCCGGGSCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEESS
T ss_pred             cccccccccccCCeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEcccCCCCcEEeCCCCEeehhcC
Confidence                     12468999999999999999999999999999999999999999999999999998653

>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*

Probab=99.79  E-value=2.6e-19  Score=165.56  Aligned_cols=105  Identities=38%  Similarity=0.551  Sum_probs=75.4

Q ss_pred             eEecCCcEECCceEEcCCCCcEECC--CcEECCCcEEcCCCEECCCCcc----------CCCCCCEECCCcEEccCCEEC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGE--TAVIGDNVSILHNVTLGGTGKM----------SGDRHPKIGNGVLVGAGTCIL  322 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~--~~~IGdnV~Ig~gvtIgg~~~i----------~g~~~~~IGd~V~IGaga~Il  322 (388)
                      +++|.++.||++++|+.  +++|.+  .++||++|.|+++|+|...++.          ....+++||++||||+||+|+
T Consensus        70 ~~~g~~i~IG~~~~I~~--~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~  147 (203)
T 1krr_A           70 FSYGSNIHIGRNFYANF--NLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVIN  147 (203)
T ss_dssp             ESCSTTEEECSSCEECS--CEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEEC
T ss_pred             EEeCCCeEECCeeEECC--ccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEe
Confidence            34455555555555554  333332  2455555555555555332110          011358999999999999999


Q ss_pred             CCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          323 GNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       323 g~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                      ++|+||++|+||+||+|++|||++++++|+|||++++..
T Consensus       148 ~gv~IG~~~vIgagsvV~~dvp~~~vv~G~PArvik~~~  186 (203)
T 1krr_A          148 PGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREIN  186 (203)
T ss_dssp             TTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEECC
T ss_pred             CCeEECCCCEECCCCEECCCcCCCcEEEccCcEEeccCC
Confidence            999999999999999999999999999999999998754

>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*

Probab=99.78  E-value=1.1e-18  Score=161.34  Aligned_cols=53  Identities=34%  Similarity=0.713  Sum_probs=50.7

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      +++||++|+||++++|.++++||++|+||+|++|.+|+|++++++|+||| +++
T Consensus       165 ~v~Ig~~~~Ig~~~~i~~~~~Ig~~~~igagsvv~~~v~~~~~~~G~Pa~-i~~  217 (220)
T 4ea9_A          165 GVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVVRDLPDSVLAIGVPAK-IKG  217 (220)
T ss_dssp             SCEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTCEEETTTTE-ECC
T ss_pred             CCEECCCCEECCCCEEcCCcEECCCCEECCCCEEccccCCCcEEEEeCCE-Eec
Confidence            68999999999999999999999999999999999999999999999999 543

>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3

Probab=99.77  E-value=1.2e-18  Score=160.94  Aligned_cols=108  Identities=28%  Similarity=0.345  Sum_probs=82.8

Q ss_pred             eeEecCCcEECCceEEcC--------------CCCcEECCCcEECCCcEEcCCCEECCCC---c----------------
Q 047635          254 SVDIHPGAKIGRGLLFDH--------------ATGVVVGETAVIGDNVSILHNVTLGGTG---K----------------  300 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~--------------gtgVvIG~~~~IGdnV~Ig~gvtIgg~~---~----------------  300 (388)
                      .+.++++++||++++|+.              ..++.+++.+.||++|.|+++|+|...+   .                
T Consensus        18 ~vv~~~~v~IG~~t~I~~~~~~~~~~~~~~~i~~~~~i~~~v~IG~~~~I~~~v~i~~~~~~~h~~~~v~~~~~~~~~~~   97 (212)
T 3eev_A           18 QQVTNPNIIVGKHSYYSGYYHGHSFDDCVRYLHPERDDVDKLVIGSFCSIGSGAVFMMAGNQGHRSDWISTFPFFYQDND   97 (212)
T ss_dssp             GTCCCTTEEECSSCEECCGGGCSCGGGGEETCCSSCSSSCCEEECSSCEECTTCEEECSTTTTCCTTSSCCSCGGGSCCG
T ss_pred             heeeCCCeEECCCeEEccccCccccccceeEECCCccccCCcEECCCCEECCCCEEEeCCCCcccccceeeccceeeccc
Confidence            456777888888887761              1233455566777777777777652211   0                


Q ss_pred             --------cCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          301 --------MSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       301 --------i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                              ....++++||++|+||+||+|+++++||++|+||+||+|.+|||++++++|+|||+++++.
T Consensus        98 ~~~~~~~~~~~~g~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~~dVp~~~vv~G~PAk~i~~~~  166 (212)
T 3eev_A           98 NFADARDGFTRSGDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTKDVAPYEVVGSNPAKHIKFRF  166 (212)
T ss_dssp             GGTTCCCCCCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEESS
T ss_pred             ccccccCCcccCCCeEECCCCEECCCCEEcCCCEECCCCEECCCCEEccccCCCcEEEecCCEEEeccC
Confidence                    0112468999999999999999999999999999999999999999999999999998753

>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}

Probab=99.76  E-value=8.9e-19  Score=166.00  Aligned_cols=107  Identities=31%  Similarity=0.507  Sum_probs=87.2

Q ss_pred             eeeEecCCcEECCceEEcCCCCcEECCCcEECCCc---------EEcCCCEECCCCccCC-----------------CCC
Q 047635          253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNV---------SILHNVTLGGTGKMSG-----------------DRH  306 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV---------~Ig~gvtIgg~~~i~g-----------------~~~  306 (388)
                      ..+.||+++.|++++.|..+..++||+++.||+++         +||++|.||.++.+..                 ..+
T Consensus        84 ~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~  163 (252)
T 3jqy_B           84 NYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKD  163 (252)
T ss_dssp             CEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCC
T ss_pred             CeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCC
Confidence            34678888888888888776677888877777743         4455666655544332                 123


Q ss_pred             CEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      ++|||+|+||++|+|.++++||++|+||+|++|.+|||++++++|+||+++++
T Consensus       164 v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~~vp~~~~~~G~Pa~~i~~  216 (252)
T 3jqy_B          164 IIISSYVWVGRNVSIMKGVSVGSGSVIGYGSIVTKDVPSMCAAAGNPAKIIKR  216 (252)
T ss_dssp             EEECSSCEECSSEEECTTCEECTTCEECTTCEECSCBCTTEEEEETTEEEEEE
T ss_pred             eEEecCcEECCCCEECCCCEECCCCEECCCCEECcccCCCCEEEccCCEEEcc
Confidence            79999999999999999999999999999999999999999999999999986

>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*

Probab=99.76  E-value=2.5e-18  Score=157.22  Aligned_cols=106  Identities=21%  Similarity=0.319  Sum_probs=79.3

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEE---------cCCCEECCCCccCC---------------------
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSI---------LHNVTLGGTGKMSG---------------------  303 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~I---------g~gvtIgg~~~i~g---------------------  303 (388)
                      .+.||+++.|++++.|..  +++||+++.|+++|.|         |++|.|+.+..+..                     
T Consensus        52 ~v~IG~~~~I~~~~~I~~--~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~  129 (205)
T 3vbi_A           52 VISIGNNVRIDDFCILSG--KVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDFSGNALMGPTIPNQYKN  129 (205)
T ss_dssp             GEEECSSEEECTTCEEEE--EEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEECCCSSSSCCSTTSCGGGCC
T ss_pred             eeEECCCCEECCCCEEcc--ceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCCcccccccCcccccccce
Confidence            456666666666666654  5666666555555443         33333333332210                     


Q ss_pred             --CCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          304 --DRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       304 --~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                        ...++||++|+||++|+|+++++||++|+||+|++|.+|||++++++|+|||+++++.
T Consensus       130 ~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~~~v~~~~v~~G~Pa~~i~~~~  189 (205)
T 3vbi_A          130 VKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVKESLDDWYIYVGVPVRKIKARK  189 (205)
T ss_dssp             CEECCEEECTTCEECTTCEECSSCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEECC
T ss_pred             eccCCEEECCCCEECCCCEEcCCCEECCCCEEcCCCEECCccCCCeEEEccCCEEeeech
Confidence              2468999999999999999999999999999999999999999999999999998765

>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*

Probab=99.75  E-value=1.2e-17  Score=158.82  Aligned_cols=88  Identities=32%  Similarity=0.365  Sum_probs=67.3

Q ss_pred             CcEECCCcEECCCcEEcCCCEECCCCcc------CC--------CCCCEECCCcEEccCCEECCCcEECCCCEECCCCEE
Q 047635          274 GVVVGETAVIGDNVSILHNVTLGGTGKM------SG--------DRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV  339 (388)
Q Consensus       274 gVvIG~~~~IGdnV~Ig~gvtIgg~~~i------~g--------~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV  339 (388)
                      +++||+++.||++|.|+++++|++...+      .+        ...++|||+|+||++++|+++++||++|+||+||+|
T Consensus       124 ~~~IG~~~~I~~~~~I~~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~v~Ig~~~~IG~~~~I~~g~~IG~~~~IgagsvV  203 (273)
T 3fs8_A          124 HVYIGNYVNIHSNVFVGEKSIIKDFVWLFPHVVLTNDPTPPSNELLGVTIELFAVIAARSVVLPGIHINEDALVGAGAVV  203 (273)
T ss_dssp             SCEECSSCEECTTCEECTTCEECTTCEECTTCEECCCSSSSCSCCCCCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred             ceEECCceEECCCCEECCCceeCCceeecCceEecCCCCCcccccCCcEECCCeEEcCCCEEcCCCEECCCCEECCCCEE
Confidence            4455555555555555555544443221      11        125899999999999999999999999999999999


Q ss_pred             CCCCCCCcEEEecCcEEeccCC
Q 047635          340 LKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       340 ~~dVp~~s~VvG~PArvi~~~~  361 (388)
                      .+|||++++++|+|||+++...
T Consensus       204 ~~dvp~~~~~~G~PA~~i~~~~  225 (273)
T 3fs8_A          204 TKDVPKETVVVGNPAREICSIR  225 (273)
T ss_dssp             CSCBCTTEEEEETTEEEEEEGG
T ss_pred             CccCCCCcEEEecCcEEecccc
Confidence            9999999999999999998544

>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*

Probab=99.75  E-value=9.4e-18  Score=157.45  Aligned_cols=58  Identities=36%  Similarity=0.685  Sum_probs=53.6

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCCC
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~  362 (388)
                      ..++||++|+||.+|+|+++++||++|+|++|++|.++||++++++|+|||++++...
T Consensus       164 ~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~~gsvV~~~vp~~~v~~G~Pak~i~~~~~  221 (240)
T 3r8y_A          164 KPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIKEIDE  221 (240)
T ss_dssp             CCCEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEEETTEEEEEEC--
T ss_pred             CCcEECCCCEECCCCEECCCcEECCCCEECCCCEECCCcCCCcEEEccCCEEEecCCH
Confidence            3489999999999999999999999999999999999999999999999999987653

>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}

Probab=99.73  E-value=3.8e-18  Score=159.50  Aligned_cols=107  Identities=30%  Similarity=0.395  Sum_probs=80.2

Q ss_pred             eEecCCcEECCceEEcCC-----------CCcEECCCcEECCCcEEcCCCEECCC----Cc-------------------
Q 047635          255 VDIHPGAKIGRGLLFDHA-----------TGVVVGETAVIGDNVSILHNVTLGGT----GK-------------------  300 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~g-----------tgVvIG~~~~IGdnV~Ig~gvtIgg~----~~-------------------  300 (388)
                      +.+++++.||++++++..           ....||+.++||++|.|+++|+|...    ..                   
T Consensus        29 ~~~~~~i~IG~~t~i~~~~~~~~~~~vi~~~~~i~~~v~IG~~~~I~~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~  108 (219)
T 4e8l_A           29 TITNENILVGEYSYYDSKRGESFEDQVLYHYEVIGDKLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYMP  108 (219)
T ss_dssp             GCCSSSEEECTTCEEECSSSCCGGGGEESCCTTTCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTCGGGCC
T ss_pred             cEECCCEEECCccEEcCCcCceecceEEeecceeCCCEEECCCCEEcCCCEEEeCCCcceecCCCcceeEecCccccccc
Confidence            444555555555555432           13345667778888888877777311    00                   


Q ss_pred             ----cCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          301 ----MSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       301 ----i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                          ....++++||++|+||++|+|+++++||++|+||+|++|.+|||++++++|+|||+++++.
T Consensus       109 ~~~~~~~~g~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~dv~~~~~~~G~Pa~~i~~r~  173 (219)
T 4e8l_A          109 SLKDLPLKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYSIVGGNPLKFIRKRF  173 (219)
T ss_dssp             CTTTSCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEESS
T ss_pred             ccccccccCCcEECCCeEECCCCEEcCCCEECCCCEECCCCEEcccCCCCeEEEecCCEeecccC
Confidence                0112468999999999999999999999999999999999999999999999999997654

>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A

Probab=99.73  E-value=1.1e-17  Score=152.50  Aligned_cols=84  Identities=23%  Similarity=0.479  Sum_probs=63.8

Q ss_pred             CcEECCCcEECCCcEEcCCCEECCCCccCC----CCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEE
Q 047635          274 GVVVGETAVIGDNVSILHNVTLGGTGKMSG----DRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTA  349 (388)
Q Consensus       274 gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~V  349 (388)
                      +++||+++.|+++++|++++.||+++.+..    ..+++||++|+||++++|.++++||++++||+|++|.+|+|+++++
T Consensus       107 ~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Igagsvv~~~v~~~~~~  186 (194)
T 3bfp_A          107 KAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGGGATLVKNQDEKGVF  186 (194)
T ss_dssp             TCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCSCCEE
T ss_pred             CCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCEECCCCEECCCCEECCCCEEccccCCCCEE
Confidence            444444444444444444444444433332    1358999999999999999999999999999999999999999999


Q ss_pred             EecCcEEe
Q 047635          350 VGNPARLI  357 (388)
Q Consensus       350 vG~PArvi  357 (388)
                      +|+|||++
T Consensus       187 ~G~Pa~~i  194 (194)
T 3bfp_A          187 VGVPAKRM  194 (194)
T ss_dssp             CCCCCCCC
T ss_pred             EeeccEEC
Confidence            99999864

>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*

Probab=99.73  E-value=1.6e-17  Score=153.45  Aligned_cols=105  Identities=19%  Similarity=0.332  Sum_probs=77.4

Q ss_pred             eEecCCcEECCceEEcC-CCCcEECCCcEEC---------------CCcEEcCCCEECCCC-----------ccCCCCCC
Q 047635          255 VDIHPGAKIGRGLLFDH-ATGVVVGETAVIG---------------DNVSILHNVTLGGTG-----------KMSGDRHP  307 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~-gtgVvIG~~~~IG---------------dnV~Ig~gvtIgg~~-----------~i~g~~~~  307 (388)
                      +.||+++.|+.++.|.. +..++||+++.||               ++|.|+++|+|.+..           ......++
T Consensus        59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v  138 (215)
T 2wlg_A           59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDV  138 (215)
T ss_dssp             EEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCE
T ss_pred             EEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCe
Confidence            66777777777766653 1235666655444               444444444443310           00112357


Q ss_pred             EECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEE-ecCcEEecc
Q 047635          308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAV-GNPARLIGG  359 (388)
Q Consensus       308 ~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~Vv-G~PArvi~~  359 (388)
                      +||++|+||++++|+++++||++|+||++++|.++||++++++ |+|||++++
T Consensus       139 ~Igd~v~IG~~~~I~~gv~Ig~~~vIgagsvV~~~vp~~~i~~aG~Pa~~i~~  191 (215)
T 2wlg_A          139 IIGNHVWLGRNVTILKGVCIPNNVVVGSHTVLYKSFKEPNCVIAGSPAKIVKE  191 (215)
T ss_dssp             EECTTCEECTTCEECTTCEECSSCEECTTCEECSCCCCCSCEEETTTTEEEEC
T ss_pred             EECCCcEECCCCEECCCCEECCCCEECCCCEEcCccCCCeEEEcccCCEEECC
Confidence            9999999999999999999999999999999999999999999 999999986

>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A

Probab=99.72  E-value=4.4e-18  Score=166.90  Aligned_cols=179  Identities=14%  Similarity=0.132  Sum_probs=112.0

Q ss_pred             cccccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHhhhcHH
Q 047635          110 SNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQE  189 (388)
Q Consensus       110 ~~~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l~~~p~  189 (388)
                      +...++....+++++.+++|.++.+++||++.++.+ .++.+|++++.+.||+|++|+......  +...+...      
T Consensus        87 ~~~~~~~~~~pei~~~l~~d~~~~~~~DPa~~~~~e-~l~~ypG~~al~~yRlah~L~~~~~~~--l~r~l~~~------  157 (313)
T 3q1x_A           87 QCVMAILEKLPSIKRTLKTDLIAAYAGDPAAPGLSL-IIRCYPGFQAVIVYRIAHVLYECGERY--YCREMMES------  157 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHH-HHHHCHHHHHHHHHHHHHHHHHTTCCS--HHHHHHHH------
T ss_pred             HHHHHHHHhCHHHHHHHHHHHHHHHcCCccccCCCe-eEEeCcCHHHHHHHHHHHHHHHcCChh--HHHHHHHh------
Confidence            345566677789999999999999999999999886 888999999999999999998653211  11111100      


Q ss_pred             HHHHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEE
Q 047635          190 IIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLF  269 (388)
Q Consensus       190 i~~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I  269 (388)
                            .....-.+.+|.+......+                                 +....++.||+++.||++|.|
T Consensus       158 ------~~~~~gv~I~p~a~IG~~v~---------------------------------I~~g~gvvIG~~~~IG~~v~I  198 (313)
T 3q1x_A          158 ------VHSYTSIDIHPGASIKGHFF---------------------------------IDHGVGVVIGETAIIGEWCRI  198 (313)
T ss_dssp             ------HHHHHCCEECTTCEECSSCE---------------------------------ESSCTTCEECTTCEECSSCEE
T ss_pred             ------ceecCCeEECCCCEECCCEE---------------------------------ECCCCceEECCCcEECCCCEE
Confidence                  00011112233332111111                                 112346778888888888888


Q ss_pred             cCCCCcEECCCc----------------EECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEE
Q 047635          270 DHATGVVVGETA----------------VIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI  333 (388)
Q Consensus       270 ~~gtgVvIG~~~----------------~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~I  333 (388)
                      ++  +++||.++                +||++|.||.|++|.+        +++||++|+||+|++|.++|..|..+.|
T Consensus       199 ~~--~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilg--------gv~IG~~a~IGagsvV~~dVp~gs~vvi  268 (313)
T 3q1x_A          199 YQ--SVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLG--------NIIVGSHVRIGANCWIDRDVDSNQTVYI  268 (313)
T ss_dssp             CT--TCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEES--------SCEECSSEEECTTCEECSCBCSSEEC--
T ss_pred             CC--CcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEECC--------CcEECCCCEECCCCEECCCcCCCCEEEE
Confidence            87  77777644                5555555555555543        6899999999999999999888777776


Q ss_pred             -CCCCEECCCCCCC
Q 047635          334 -GAGSVVLKDVPPR  346 (388)
Q Consensus       334 -GagsVV~~dVp~~  346 (388)
                       |..+.+.+++++.
T Consensus       269 ~G~PAkvik~~~~~  282 (313)
T 3q1x_A          269 SEHPTHFVKPCTTK  282 (313)
T ss_dssp             --------------
T ss_pred             cCCCcEEEeeCccc
Confidence             8999999988654

>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}

Probab=99.71  E-value=6.6e-17  Score=146.99  Aligned_cols=54  Identities=19%  Similarity=0.204  Sum_probs=50.0

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC--CCCCcEEEecCcEEecc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGG  359 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~  359 (388)
                      .+.||++|+||++|+|+++++||++|+||+|++|.++  ||++++++|+||+...+
T Consensus       102 ~~~Ig~~~~Ig~~~~I~~gv~IG~~~~IgagsvV~~~~~Ip~~svv~G~pa~~~~~  157 (194)
T 3tv0_A          102 AMKMGDNNVIESKAYVGRNVILTSGCIIGACCNLNTFEVIPENTVIYGADCLRRVQ  157 (194)
T ss_dssp             CSEECSSCEECTTCEECTTEEECSSCEECTTCEECCCEEECTTEEEESTTCCEEEE
T ss_pred             eeeecccceecceeeECCeEEECCCCEECCCCEECCCcEECCCCEEECCCcEEeec
Confidence            4688999999999999999999999999999999999  89999999999986543

>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A

Probab=99.70  E-value=7.8e-17  Score=155.27  Aligned_cols=58  Identities=24%  Similarity=0.454  Sum_probs=53.5

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECC---------------CCCCCcEEE-ec-C----------cEEe
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK---------------DVPPRTTAV-GN-P----------ARLI  357 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~---------------dVp~~s~Vv-G~-P----------Arvi  357 (388)
                      .+++||++|+||+||+|.++++||++|+||+|++|.+               +||++++|+ |+ |          |+++
T Consensus       176 ~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~~~~I~~~~~~~~~~g~Vp~~svvv~G~~P~~~g~~~~~~A~ii  255 (276)
T 3gos_A          176 NPTIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQSTRIYDRETGEVHYGRVPAGSVVVSGNLPSKDGSYSLYCAVIV  255 (276)
T ss_dssp             CCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEEEEEEEECTTSSCEEEEEEEE
T ss_pred             CCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEccccccceeccccCCCcEEECCCccCCCCcccccccEEE
Confidence            4689999999999999999999999999999999998               899999994 96 9          9999


Q ss_pred             ccCCC
Q 047635          358 GGKEN  362 (388)
Q Consensus       358 ~~~~~  362 (388)
                      ++...
T Consensus       256 k~~~~  260 (276)
T 3gos_A          256 KKVDA  260 (276)
T ss_dssp             EECCC
T ss_pred             EEcCh
Confidence            87654

>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*

Probab=99.69  E-value=4.3e-17  Score=151.12  Aligned_cols=106  Identities=31%  Similarity=0.379  Sum_probs=78.7

Q ss_pred             eeEecCCcEECCc-------eEEcCCCCcEECCCcEECCCcEEcCCCEECC---CC----------cc------------
Q 047635          254 SVDIHPGAKIGRG-------LLFDHATGVVVGETAVIGDNVSILHNVTLGG---TG----------KM------------  301 (388)
Q Consensus       254 gV~Ig~~a~IG~g-------v~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg---~~----------~i------------  301 (388)
                      ++.||+.+.|+++       +.+.+  ...+++.++||++|.|+++|+|..   +-          .+            
T Consensus        29 ~i~IG~~~~I~~~~~~~i~~~~i~~--~~~i~~~v~IG~~~~Ig~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~i~~  106 (209)
T 1mr7_A           29 NVEVGEYSYYDSKNGETFDKQILYH--YPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLD  106 (209)
T ss_dssp             TEEECTTCEEECSSSCCGGGGEESC--CGGGCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGG
T ss_pred             CeEECCCcEEcCCCceEEeceEEee--ccccCCCEEECCCCEEcCCCEEEeCCCcccccCccccceEECCcccccccccc
Confidence            4556666666553       33333  344566677777777777776521   00          00            


Q ss_pred             --CCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          302 --SGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       302 --~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                        ....+++||++|+||++|+|+++++||++|+||+|++|.+|||++++++|+|||+++.+.
T Consensus       107 ~~~~~~~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~~~v~~~~i~~G~Pa~~i~~~~  168 (209)
T 1mr7_A          107 QLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRF  168 (209)
T ss_dssp             GSCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEEETTEEEEEESS
T ss_pred             cccccCCcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEcCCCCCCeEEEeeCCEEeeccC
Confidence              112358999999999999999999999999999999999999999999999999997653

>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0

Probab=99.69  E-value=1.8e-16  Score=151.33  Aligned_cols=107  Identities=27%  Similarity=0.311  Sum_probs=88.3

Q ss_pred             eeeEecCCcEECCceEEcCCC-----CcEECCCcEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEECC
Q 047635          253 FSVDIHPGAKIGRGLLFDHAT-----GVVVGETAVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gt-----gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Ilg  323 (388)
                      ..+.||+++.|++++.|..++     .++||+++.|+.++.|+++++||++..+...    .+++|||+|+||++++|.+
T Consensus        82 ~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~  161 (266)
T 3r0s_A           82 SGVVIGKNATIREFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQ  161 (266)
T ss_dssp             CEEEECTTCEECTTCEEECCCTTTTSEEEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred             ceEEECCCCEECCceEecCCcccCCccEEECCCceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCEECC
Confidence            467788888888888887643     2778887777777777777766665544332    3699999999999999999


Q ss_pred             CcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          324 NIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      +++||++++||++++|.+|||++++++|+|||+.+.
T Consensus       162 ~v~Ig~~a~Vg~~s~V~~dvp~~~~~~G~Pa~~~~~  197 (266)
T 3r0s_A          162 FVKVGEGCMIAGASALSQDIVPFCLAEGNRASIRSL  197 (266)
T ss_dssp             TCEECTTCEECSSCBBCSCBCTTEEEEEBTEEEEEE
T ss_pred             CcEECCCCEEccCCeEecccCCCeEEeccCcEEeec
Confidence            999999999999999999999999999999999543

>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*

Probab=99.69  E-value=1.4e-16  Score=151.13  Aligned_cols=107  Identities=21%  Similarity=0.284  Sum_probs=84.9

Q ss_pred             eeeEecCCcEECCceEEcCCC----CcEECCCcEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEECCC
Q 047635          253 FSVDIHPGAKIGRGLLFDHAT----GVVVGETAVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCILGN  324 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gt----gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Ilg~  324 (388)
                      ..+.||+++.|++++.|..++    .++||+++.|++++.|+++|+||.+..+...    .+++|||+|+||++++|.++
T Consensus        78 ~~v~IG~~~~Ig~~~~I~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~  157 (259)
T 3hsq_A           78 TKTVIGDHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQF  157 (259)
T ss_dssp             CCEEECSSCEECTTCEEECCSBTTBCEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECSSEEECTT
T ss_pred             CcEEECCCcEECCCCEECCCccCCCcEEECCCcEEcCCcEECCCcEECCccEEcCCceECCccEECCCcEEeCCCEECCC
Confidence            456777777777777776432    5666776666666666666666555444332    36899999999999999999


Q ss_pred             cEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          325 IKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       325 V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      ++||++|+||++++|.+|||+++++.|+|||+++.
T Consensus       158 v~Ig~~~~Vg~~s~V~~dvp~~~~~~G~pa~~~~~  192 (259)
T 3hsq_A          158 CFVGDYSMVAGLAKVVQDVPPYSTVDGNPSTVVGL  192 (259)
T ss_dssp             CEECTTCEECSSEEECSBBCTTEEEETTTTEEEEE
T ss_pred             CEECCCCEECCCCEEcccCCCCcEEeccCcEEEee
Confidence            99999999999999999999999999999999854

>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A

Probab=99.69  E-value=8.7e-17  Score=144.54  Aligned_cols=110  Identities=25%  Similarity=0.318  Sum_probs=80.8

Q ss_pred             eeeeEecCCcEECCceEEcCCC-CcEECCCcEECCCcEE-----------cCCCEECCCCccCCC---CCCEECCCcEEc
Q 047635          252 VFSVDIHPGAKIGRGLLFDHAT-GVVVGETAVIGDNVSI-----------LHNVTLGGTGKMSGD---RHPKIGNGVLVG  316 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gt-gVvIG~~~~IGdnV~I-----------g~gvtIgg~~~i~g~---~~~~IGd~V~IG  316 (388)
                      ..++.||+++.|+.++.|..+. .++||+++.|+++|.|           +.+++||++..+...   ..++||++|+||
T Consensus        31 ~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig  110 (187)
T 3r3r_A           31 IGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRVLVG  110 (187)
T ss_dssp             EEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEESCEECSSEEEC
T ss_pred             ECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeCcEECCCCEEC
Confidence            3456666666666666665411 2466666666666655           233444443332221   247999999999


Q ss_pred             cCCEECCCcEECCCCEECCCCEEC--CCCCCCcEEEecCcEEeccCC
Q 047635          317 AGTCILGNIKIGDGAKIGAGSVVL--KDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       317 aga~Ilg~V~IGd~v~IGagsVV~--~dVp~~s~VvG~PArvi~~~~  361 (388)
                      ++++|.++++||++|+||+|++|.  ++||++++++|+||++++...
T Consensus       111 ~~~~I~~~~~Ig~~~~Ig~~s~V~~~~~i~~~~vv~G~pa~~i~~~~  157 (187)
T 3r3r_A          111 MGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLS  157 (187)
T ss_dssp             TTCEECTTCEECSSEEECTTCEECTTCEECTTEEEETTTTEEEEECC
T ss_pred             CCCEECCCCEECCCCEECCCCEECCCcCcCCCcEEEecCCeEcCcCC
Confidence            999999999999999999999999  789999999999999998654

>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}

Probab=99.69  E-value=9.4e-17  Score=144.37  Aligned_cols=110  Identities=17%  Similarity=0.256  Sum_probs=80.9

Q ss_pred             eeeeEecCCcEECCceEEcCC-CCcEECCCcEECCCcEEcC-----------CCEECCCCccCCC---CCCEECCCcEEc
Q 047635          252 VFSVDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSILH-----------NVTLGGTGKMSGD---RHPKIGNGVLVG  316 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~Ig~-----------gvtIgg~~~i~g~---~~~~IGd~V~IG  316 (388)
                      ..++.||+++.|+.++.|... ..++||+++.|+++|.|..           +++||.+..+...   ..++||++|+||
T Consensus        35 ~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig  114 (189)
T 3r1w_A           35 IGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCTIGNRVLIG  114 (189)
T ss_dssp             EEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESCEECSSEEEC
T ss_pred             eeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCcEECCCcEEC
Confidence            345667777777777776521 1456777777766665432           2344333322221   137999999999


Q ss_pred             cCCEECCCcEECCCCEECCCCEEC--CCCCCCcEEEecCcEEeccCC
Q 047635          317 AGTCILGNIKIGDGAKIGAGSVVL--KDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       317 aga~Ilg~V~IGd~v~IGagsVV~--~dVp~~s~VvG~PArvi~~~~  361 (388)
                      ++++|.++++||++|+||+|++|.  ++||++++++|+||++++...
T Consensus       115 ~~~~i~~~v~Ig~~~~Ig~~s~V~~g~~i~~~~vv~G~pa~~i~~~~  161 (189)
T 3r1w_A          115 MKSMIMDGAIVEDEVIVAAGATVSPGKVLESGFVYMGTPAKKVRPIT  161 (189)
T ss_dssp             TTCEECTTCEECSSCEECTTCEECTTCEECTTEEEETTTTEEEEECC
T ss_pred             CCCEEcCCCEECCCCEEccCCEECCCCEeCCCCEEECCccccccCCC
Confidence            999999999999999999999999  779999999999999998654

>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*

Probab=99.68  E-value=6.8e-17  Score=150.27  Aligned_cols=56  Identities=34%  Similarity=0.589  Sum_probs=53.6

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccC
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGK  360 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~  360 (388)
                      .+++||++|+||++|+|+++++||++|+||+||+|.+|||++++++|+|||+++.+
T Consensus       109 ~~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~~vp~~~~~~G~Pa~~i~~~  164 (212)
T 1xat_A          109 GDTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAIVGGNPARTIRKR  164 (212)
T ss_dssp             CCEEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEES
T ss_pred             CCeEECCCCEECCCCEEeCCCEECCCCEECCCCEEcccCCCCcEEEccCCEEEccc
Confidence            36899999999999999999999999999999999999999999999999999764

>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}

Probab=99.68  E-value=2.5e-16  Score=153.34  Aligned_cols=108  Identities=23%  Similarity=0.305  Sum_probs=88.9

Q ss_pred             eeeEecCCcEECCceEEcCCC----CcEECCCcEECCCcEEcCCCEECCCCccCC----CCCCEECCCcEEccCCEECCC
Q 047635          253 FSVDIHPGAKIGRGLLFDHAT----GVVVGETAVIGDNVSILHNVTLGGTGKMSG----DRHPKIGNGVLVGAGTCILGN  324 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gt----gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Ilg~  324 (388)
                      ..+.||.++.|++++.|..++    .++||+++.|+.++.|+++|+||.+..+..    ..+++|||+|+||++++|.++
T Consensus       107 ~~i~IG~~~~I~~~~~I~~g~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~g~v~Igd~~~Ig~~~~V~~~  186 (305)
T 3t57_A          107 CFLCIGNNNEIREFCSIHRSSKPSDKTVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAGHVVVEDNTHTAGASVVHQF  186 (305)
T ss_dssp             EEEEECSSCEECTTCEEECCSSTTCCEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTT
T ss_pred             ceEEECCCcccCceEEEeecccccCccEEccCccccceEEEeCceEeCCceEECCCcccCCCCEECCceEEcCCCEEcCC
Confidence            347788888888888886532    567777777777777777777776544433    247999999999999999999


Q ss_pred             cEECCCCEECCCCEECCCCCCCcEEEecCcEEeccC
Q 047635          325 IKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGK  360 (388)
Q Consensus       325 V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~  360 (388)
                      ++||++|+||+|++|.+|||+++++.|+|||+.+..
T Consensus       187 v~IG~~a~ig~gs~V~~dvp~~~~~~G~Pa~~~~~n  222 (305)
T 3t57_A          187 CHIGSFAFIGGGSVVSQDVPKYMMVAGERAELRGLN  222 (305)
T ss_dssp             CEECTTCEECTTCEECSBBCTTEEEETTBTEEEEEC
T ss_pred             eEECCCCEEcCCCeEcccCCCCeEEecCCcEEeccc
Confidence            999999999999999999999999999999997543

>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}

Probab=99.68  E-value=2e-16  Score=155.39  Aligned_cols=88  Identities=23%  Similarity=0.388  Sum_probs=64.9

Q ss_pred             cEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECC-------------
Q 047635          275 VVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK-------------  341 (388)
Q Consensus       275 VvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~-------------  341 (388)
                      ++||+++.||++|.|++++.|++........+++|||+|+||++|+|+++++||++|+||+|++|.+             
T Consensus       187 ~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~g~vIgagsvV~~~t~I~d~~~~~v~  266 (316)
T 3tk8_A          187 ATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDNCFIGARSEVVEGVIVEENSVISMGVYLGQSTKIYDRETGEVT  266 (316)
T ss_dssp             EEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCCEEETTTCCEE
T ss_pred             eEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCCCEECCCCEEcCCCEECCCCEEcCCCEEcCCeeeccccccccc
Confidence            3444444444444444444443322222233689999999999999999999999999999999998             


Q ss_pred             --CCCCCcEE-Eec-C----------cEEeccCCC
Q 047635          342 --DVPPRTTA-VGN-P----------ARLIGGKEN  362 (388)
Q Consensus       342 --dVp~~s~V-vG~-P----------Arvi~~~~~  362 (388)
                        +||++++| .|+ |          |+++++...
T Consensus       267 ~g~Vp~gsvVvaGsvP~~~g~~~~~~A~iik~~~~  301 (316)
T 3tk8_A          267 YGRIPAGSVVVAGNLPAKDGTHSLYCAVIVKKVDA  301 (316)
T ss_dssp             CSEECTTEEEEEEEEECTTSSCEEEEEEEEEECCC
T ss_pred             ccEeCCCCEEECCCCcCCcccccccceEEEEECCc
Confidence              89999999 596 9          999987654

>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*

Probab=99.68  E-value=9.7e-17  Score=154.18  Aligned_cols=179  Identities=14%  Similarity=0.174  Sum_probs=126.2

Q ss_pred             cccccccccccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHH
Q 047635          104 QAIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGV  183 (388)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~  183 (388)
                      +....++...++...++++++.+++|.+..+++||++.++++ .++.+++|++...||+||+|+.....  .+...+...
T Consensus        55 ~~~~~~~~~~~~~~~~p~i~~~~~~D~~~~~~~DPa~~~~~~-~l~~~~g~~al~~yR~ah~l~~~~~~--~l~~~l~~~  131 (267)
T 1ssq_A           55 PAISLREIIEEAYQSNPSIIDCAACDIQAVRHRDPAVELWST-PLLYLKGFHAIQSYRITHYLWNQNRK--SLALYLQNQ  131 (267)
T ss_dssp             CHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHCTTCCCTHH-HHHHCHHHHHHHHHHHHHHHHTTTCH--HHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHcCChhhhcccH-HHhhhchHHHHHHHHHHHHHHHhHHH--HHHHHHHHh
Confidence            333445556677788899999999999999999999999886 78889999999999999999875331  111111100


Q ss_pred             hhhcHHHHHHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEE
Q 047635          184 IVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKI  263 (388)
Q Consensus       184 l~~~p~i~~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~I  263 (388)
                                .  ....-.+.+|.+......+                                 +....++.||++++|
T Consensus       132 ----------~--~~~~g~~I~p~a~IG~g~~---------------------------------I~~~~~vvIG~~~~I  166 (267)
T 1ssq_A          132 ----------I--SVAFDVDIHPAAKIGHGIM---------------------------------FDHATGIVVGETSVI  166 (267)
T ss_dssp             ----------H--HHHHSCEECTTCEECSSCE---------------------------------ESSCTTCEECTTCEE
T ss_pred             ----------c--eeccceEeCCCCEECCCEE---------------------------------ECCCCceEECCeeEE
Confidence                      0  0111122333332111111                                 112246789999999


Q ss_pred             CCceEEcCCCCcEECCC--------cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCC-EEC
Q 047635          264 GRGLLFDHATGVVVGET--------AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGA-KIG  334 (388)
Q Consensus       264 G~gv~I~~gtgVvIG~~--------~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v-~IG  334 (388)
                      |++|.|.+  +++||.+        ++||++|.||.|++|.+        +++||++|+||+|++|.++  |.+++ ++|
T Consensus       167 G~~v~I~~--gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~--------gv~IG~~a~IGagsvV~~d--Vp~~~~v~G  234 (267)
T 1ssq_A          167 ENDVSILQ--GVTLGGTGKESGDRHPKVREGVMIGAGAKILG--------NIEVGKYAKIGANSVVLNP--VPEYATAAG  234 (267)
T ss_dssp             CTTCEECT--TCEEECCSSSCSSCSCEECTTCEECTTCEEES--------SCEECTTCEECTTCEECSC--BCTTCEEET
T ss_pred             CCCCEEcC--CcEECCCcccCCCCCeEECCCeEEcCCCEEeC--------CcEECCCCEECCCCEEccC--CCCCCEEEe
Confidence            99999988  8888875        78999999999998876        6899999999999999987  45665 456


Q ss_pred             CCCEECCC
Q 047635          335 AGSVVLKD  342 (388)
Q Consensus       335 agsVV~~d  342 (388)
                      ..+.+.+.
T Consensus       235 ~PAr~i~~  242 (267)
T 1ssq_A          235 VPARIVSQ  242 (267)
T ss_dssp             TTTEECC-
T ss_pred             cCcEEecc
Confidence            66666543

>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}

Probab=99.67  E-value=4.1e-16  Score=150.06  Aligned_cols=106  Identities=25%  Similarity=0.340  Sum_probs=84.3

Q ss_pred             eeEecCCcEECCceEEcCCC-----CcEECCCcEECCCcEEcCCCEECCCCccCC----CCCCEECCCcEEccCCEECCC
Q 047635          254 SVDIHPGAKIGRGLLFDHAT-----GVVVGETAVIGDNVSILHNVTLGGTGKMSG----DRHPKIGNGVLVGAGTCILGN  324 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gt-----gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Ilg~  324 (388)
                      .+.||.++.|++++.|..++     .++||+++.|+.++.|+++|+||++..+..    ..+++|||+|+||++++|.++
T Consensus       100 ~v~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~  179 (283)
T 4eqy_A          100 RLVIGDRNTIREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQY  179 (283)
T ss_dssp             EEEECSSCEECTTEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred             eEEECCCcccCcceeEccceecCCCceEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCC
Confidence            56677777777777776533     267777766666666666666655544433    136999999999999999999


Q ss_pred             cEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          325 IKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       325 V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      ++||++++||++++|.+|||+++++.|+||++++.
T Consensus       180 v~Ig~~~vvg~~s~V~~dvp~~~~~~G~pa~~~~~  214 (283)
T 4eqy_A          180 VRIGAHSMLGGASALVQDIPPFVIAAGNKAEPHGI  214 (283)
T ss_dssp             CEECTTCEECTTCEECSBBCTTEEEETBTTEEEEE
T ss_pred             eEECCCcEECCCCeEecccCCCcEEeccCcEEeec
Confidence            99999999999999999999999999999999854

>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A

Probab=99.67  E-value=2.6e-16  Score=140.41  Aligned_cols=109  Identities=28%  Similarity=0.426  Sum_probs=82.9

Q ss_pred             eeeEecCCcEECCceEEcCC-CCcEECCCcEECCCcEEc----CCCEECCCCccCCC---CCCEECCCcEEccCCEECCC
Q 047635          253 FSVDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSIL----HNVTLGGTGKMSGD---RHPKIGNGVLVGAGTCILGN  324 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~Ig----~gvtIgg~~~i~g~---~~~~IGd~V~IGaga~Ilg~  324 (388)
                      ..+.||+++.|+.++.|... ..++||+++.|+++|.|.    ++++||.+..+...   ..++||++|+||++++|.++
T Consensus        29 ~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~  108 (173)
T 1xhd_A           29 GDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMGSIILDG  108 (173)
T ss_dssp             EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTCEECTTCEECTT
T ss_pred             CCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCCEEcCCCEEcCC
Confidence            45667777777777766531 126777777777776665    24555554443321   24799999999999999999


Q ss_pred             cEECCCCEECCCCEEC--CCCCCCcEEEecCcEEeccCC
Q 047635          325 IKIGDGAKIGAGSVVL--KDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       325 V~IGd~v~IGagsVV~--~dVp~~s~VvG~PArvi~~~~  361 (388)
                      ++||++|+||++++|.  ++||++++++|+||+++++..
T Consensus       109 ~~Ig~~~~Ig~~s~V~~~~~i~~~~vv~G~pa~~~~~~~  147 (173)
T 1xhd_A          109 AEIGEGAFIGAGSLVSQGKKIPPNTLAFGRPAKVIRELT  147 (173)
T ss_dssp             CEECTTCEECTTCEECTTCEECTTEEEEETTEEEEEECC
T ss_pred             CEECCCCEECCCCEECCCcEeCCCCEEECCCCEECCCCC
Confidence            9999999999999999  679999999999999998644

>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}

Probab=99.67  E-value=3.5e-16  Score=152.90  Aligned_cols=88  Identities=25%  Similarity=0.416  Sum_probs=65.0

Q ss_pred             CcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEEC-------------
Q 047635          274 GVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVL-------------  340 (388)
Q Consensus       274 gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~-------------  340 (388)
                      +++||+++.||++|.|+.++.|++.........++||++|+||++|+|+++++||++|+||+|++|.             
T Consensus       170 ~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~g~~Igd~~~g~~  249 (304)
T 3eg4_A          170 WATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIVDRATGEV  249 (304)
T ss_dssp             TEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCCEEETTTCCE
T ss_pred             CcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCCcEECCCCEEcCCeEECccceeee
Confidence            3344444444444444444444332222223468999999999999999999999999999999999             


Q ss_pred             --CCCCCCcEEE----------ecC-------cEEeccCC
Q 047635          341 --KDVPPRTTAV----------GNP-------ARLIGGKE  361 (388)
Q Consensus       341 --~dVp~~s~Vv----------G~P-------Arvi~~~~  361 (388)
                        ++||++++|+          |+|       |+++++..
T Consensus       250 ~~~~Ip~~svV~~Gs~v~kd~~G~P~g~~~~~A~iik~~~  289 (304)
T 3eg4_A          250 FYGEVPPYSVVVAGTMPGKNVPGENWGPSLYCAVIVKRAD  289 (304)
T ss_dssp             ECSEECTTEEEEEEEEECCCCTTSSCCCEEEEEEEEEECC
T ss_pred             ccCEeCCCCEEecCcEecCCCCCCcCcccccceEEEEEcc
Confidence              6799999999          999       99998754

>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*

Probab=99.67  E-value=5.4e-16  Score=147.50  Aligned_cols=107  Identities=29%  Similarity=0.395  Sum_probs=84.8

Q ss_pred             eeeEecCCcEECCceEEcCCC-----CcEECCCcEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEECC
Q 047635          253 FSVDIHPGAKIGRGLLFDHAT-----GVVVGETAVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gt-----gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Ilg  323 (388)
                      ..+.||+++.|++++.|..++     .++||+++.|+.++.|+++++||++..+...    .+++|||+|+||++++|.+
T Consensus        84 ~~~~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~  163 (265)
T 4e6u_A           84 TWLEIGNNNLIREHCSLHRGTVQDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQ  163 (265)
T ss_dssp             CEEEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECT
T ss_pred             CeEEECCCeEECCceEECcccccCCCceEEccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEECC
Confidence            356777777777777776532     3667776666666666666666555444331    3699999999999999999


Q ss_pred             CcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          324 NIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      +++||++++|+++++|.+|||+++++.|+|||+++.
T Consensus       164 ~v~Ig~~~~i~~~svV~~dvp~~~~~~G~pa~~~~~  199 (265)
T 4e6u_A          164 FCKIDSYSMIGGASLILKDVPAYVMASGNPAHAFGI  199 (265)
T ss_dssp             TCEECTTCEECTTCEECSBBCTTEEEEETTEEEEEE
T ss_pred             CcEECCCCEEcCCCEEcccCCCCeEEEccCCEEecc
Confidence            999999999999999999999999999999999854

>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}

Probab=99.67  E-value=6.2e-17  Score=156.92  Aligned_cols=176  Identities=15%  Similarity=0.185  Sum_probs=117.9

Q ss_pred             cccccccccccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHH
Q 047635          104 QAIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGV  183 (388)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~  183 (388)
                      +....+++..++....+++++.+++|.+..+++||++.++++ .+|.+++|++.+.||++++|+.....  .+...+   
T Consensus        82 ~~~~~~~~~~~~~~~~p~i~~~~~~d~~~~~~~DPa~~~~~e-~ll~y~G~~al~~yRiah~L~~~g~~--~la~~i---  155 (287)
T 3mc4_A           82 SADILRQTFDTMLEANPEWSHVLRVDIQAVYDRDPAYSRFMD-PVLYLKGFHAIQTHRLAHWLYKQGRK--DFAYYL---  155 (287)
T ss_dssp             CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHCTTCCCTHH-HHHHCHHHHHHHHHHHHHHHHHTTCH--HHHHHH---
T ss_pred             CHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccCcccCCCCE-EEEeCHHHHHHHHHHHHHHHHHcCCh--hHHHHH---
Confidence            333445556667778889999999999999999999999887 88899999999999999999864221  111111   


Q ss_pred             hhhcHHHHHHHHHHHHH--HhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCc
Q 047635          184 IVEDQEIIKAVKADLIA--IKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGA  261 (388)
Q Consensus       184 l~~~p~i~~~i~~Dl~a--~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a  261 (388)
                                 ......  -.+..|.+......+                                 +....++.||+++
T Consensus       156 -----------~~~~~~~~gi~I~p~a~IG~~v~---------------------------------I~hg~gvvIG~~~  191 (287)
T 3mc4_A          156 -----------QSRSSSIFQTDIHPAARLGSGLF---------------------------------LDHATGLVVGETA  191 (287)
T ss_dssp             -----------HHHHHHHTCCEECTTCEECSSCE---------------------------------EESCTTCEECTTC
T ss_pred             -----------HhhceeccCeEECCCCEECCCeE---------------------------------EccCCCeEECCCe
Confidence                       000000  111222221111111                                 1112467788888


Q ss_pred             EECCceEEcCCCCcEECCC--------cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCC-E
Q 047635          262 KIGRGLLFDHATGVVVGET--------AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGA-K  332 (388)
Q Consensus       262 ~IG~gv~I~~gtgVvIG~~--------~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v-~  332 (388)
                      +||++|.|.+  +++||.+        ++||+||.||.|++|.+        +++||++|+||+|++|.++|  .+++ +
T Consensus       192 ~IGd~v~I~~--gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~--------gv~IG~~a~IGagsvV~kdV--p~~svv  259 (287)
T 3mc4_A          192 VVEDNVSILH--GVTLGGTGKSSGDRHPKIRQGVLIGAGAKILG--------NIQVGQCSKIAAGSVVLKSV--PHNVTV  259 (287)
T ss_dssp             EECSSCEEET--TCEEEC-----CCCSCEECTTCEECTTCEEES--------SCEECTTCEECTTCEECSCB--CTTEEE
T ss_pred             EECCCCEEcC--CCEEcCCcccCCCcCCEECCCCEECCCCEECC--------CcEECCCCEECCCCEEcccc--CCCCEE
Confidence            8888888887  7788775        78888888888888876        57888888888888888763  3443 4


Q ss_pred             ECCCCEECC
Q 047635          333 IGAGSVVLK  341 (388)
Q Consensus       333 IGagsVV~~  341 (388)
                      +|..+.+.+
T Consensus       260 vG~PAkii~  268 (287)
T 3mc4_A          260 AGVPARIIG  268 (287)
T ss_dssp             ETTTTEEEE
T ss_pred             EccCCEEeC
Confidence            455555543

>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A

Probab=99.66  E-value=1.2e-16  Score=151.36  Aligned_cols=106  Identities=26%  Similarity=0.352  Sum_probs=87.5

Q ss_pred             eeEecCCcEECCceEEcCCC-----CcEECCCcEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEECCC
Q 047635          254 SVDIHPGAKIGRGLLFDHAT-----GVVVGETAVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCILGN  324 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gt-----gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Ilg~  324 (388)
                      .+.||+++.|++++.|..++     .++||+++.|+.++.|.++++||.+..+...    .+++||++|+||++++|.++
T Consensus        83 ~~~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~I~~~  162 (262)
T 2qia_A           83 RVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQF  162 (262)
T ss_dssp             EEEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred             ceEECCCceeCCCCEEcCCccCCCCcCEECCCcEEeeeeEECCCCEECCCeEECCcccccCCcEECCCcEEccCCEECCC
Confidence            56677777777777776542     3778888877777777777777665544332    46899999999999999999


Q ss_pred             cEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          325 IKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       325 V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      ++||++|+||++|+|.+|||+++++.|+||++++.
T Consensus       163 v~Ig~~~~ig~~s~V~~~v~~~~~~~G~pa~~~~~  197 (262)
T 2qia_A          163 CIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGV  197 (262)
T ss_dssp             CEECTTCEECSSCEECSBBCTTEEEEEBTEEEEEE
T ss_pred             CEECCCCEEccCCEECCcCCCCeEEeccCceEecc
Confidence            99999999999999999999999999999999864

>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}

Probab=99.66  E-value=5.4e-16  Score=140.74  Aligned_cols=110  Identities=24%  Similarity=0.345  Sum_probs=79.7

Q ss_pred             eeeeEecCCcEECCceEEcCC-CCcEECCCcEECCCcEEcC-----CCEECCCCccCCC---CCCEECCCcEEccCCEEC
Q 047635          252 VFSVDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSILH-----NVTLGGTGKMSGD---RHPKIGNGVLVGAGTCIL  322 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~Ig~-----gvtIgg~~~i~g~---~~~~IGd~V~IGaga~Il  322 (388)
                      ...+.||+++.|+.++.|... ..++||+++.||++|.|..     ++.||.+..+...   ..++||++|+||++++|.
T Consensus        49 ~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~  128 (191)
T 3ixc_A           49 IGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNNAFVGMGSIVM  128 (191)
T ss_dssp             EEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTTCEECTTCEEC
T ss_pred             eCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCCCEECCCCEEe
Confidence            345666666666666666421 1346666666666555432     3333333332221   247999999999999999


Q ss_pred             CCcEECCCCEECCCCEEC--CCCCCCcEEEecCcEEeccCC
Q 047635          323 GNIKIGDGAKIGAGSVVL--KDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       323 g~V~IGd~v~IGagsVV~--~dVp~~s~VvG~PArvi~~~~  361 (388)
                      ++++||++|+||+|++|.  ++||++++++|+||+++++..
T Consensus       129 ~~~~Ig~~~~Ig~gsvV~~~~~i~~~~~v~G~pa~~i~~~~  169 (191)
T 3ixc_A          129 DRAVMEEGSMLAAGSLLTRGKIVKSGELWAGRPAKFLRMMT  169 (191)
T ss_dssp             TTCEECTTCEECTTCEECTTCEECTTEEEEETTEEEEEECC
T ss_pred             CCeEECCCCEECCCCEECCCcCcCCCeEEECcCceecccCC
Confidence            999999999999999999  779999999999999998654

>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1

Probab=99.66  E-value=6.1e-16  Score=148.19  Aligned_cols=107  Identities=26%  Similarity=0.347  Sum_probs=84.4

Q ss_pred             eeeEecCCcEECCceEEcCCC-----CcEECCCcEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEECC
Q 047635          253 FSVDIHPGAKIGRGLLFDHAT-----GVVVGETAVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gt-----gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Ilg  323 (388)
                      ..+.||+++.|++++.|..++     .++||+++.|+.++.|+++|+||.+..+...    .+++|||+|+||++++|.+
T Consensus        78 ~~~~IG~~~~I~~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~~  157 (270)
T 1j2z_A           78 SELIIGEDNLIREFCMINPGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQ  157 (270)
T ss_dssp             CEEEECSSCEECTTCEECCCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECT
T ss_pred             cceEECCCCEECCCeEEcCCeecCCccEEECCCcEECcccccCCCcEECCCcEEcCCccccCccEECCCeEEecCCEECC
Confidence            346667777777777776542     4677777766666666666666655444331    3689999999999999999


Q ss_pred             CcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          324 NIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      +++||++|+||++|+|.+|||+++++.|+||++++.
T Consensus       158 ~v~IG~~a~Ig~~s~V~~dvp~~~~~~G~pa~~~~~  193 (270)
T 1j2z_A          158 FVRIAKGCMIAGKSALGKDVPPYCTVEGNRAFIRGL  193 (270)
T ss_dssp             TCEECTTCEECTTCEECSBBCTTEEEETTBTEEEEE
T ss_pred             CcEeCCceEEecCcEecccCCCCeEEecCCcEEecc
Confidence            999999999999999999999999999999999964

>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}

Probab=99.66  E-value=2.9e-16  Score=153.79  Aligned_cols=165  Identities=16%  Similarity=0.194  Sum_probs=105.2

Q ss_pred             ccccccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHhhhcH
Q 047635          109 RSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQ  188 (388)
Q Consensus       109 ~~~~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l~~~p  188 (388)
                      +++..++....+++++.+++|++..+++||++.++++ .++.+|++++.+.||++|+|+......  +..++....    
T Consensus       113 ~~~~~~~~~~~p~i~~~l~~di~~~~~~DPa~~s~~e-~l~~ypg~~al~~~Riah~l~~~~~~~--lar~i~~~~----  185 (310)
T 3f1x_A          113 SLLAARFISKLPELRRILATDVEAAYYGDPAATCFGE-IISCYPAIRAISNYRIAHELLILGVPL--IPRFITEMA----  185 (310)
T ss_dssp             HHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTCCCHHH-HHHHCHHHHHHHHHHHHHHHHHTTCCS--HHHHHHHHH----
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHhcCCchhcCcce-EEEeCcCHHHHHHHHHHHHHHHhhHHH--HHHHHHHhc----
Confidence            4556677788899999999999999999999999886 888999999999999999998653211  111111000    


Q ss_pred             HHHHHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceE
Q 047635          189 EIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLL  268 (388)
Q Consensus       189 ~i~~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~  268 (388)
                              ....-.+..|.+......+                                 +....++.||++++||++|.
T Consensus       186 --------~~~~gv~I~p~a~IG~~v~---------------------------------I~hg~gvvIG~~~~IG~~v~  224 (310)
T 3f1x_A          186 --------HSETGIDIHPGAQIGHHFT---------------------------------IDHGTGVVIGATSIIGNNVK  224 (310)
T ss_dssp             --------HHHHSCEECTTCEECSSCE---------------------------------EESCTTCEECTTCEECSSCE
T ss_pred             --------cccCCcEECCCCEECCCcE---------------------------------ECCCCCeEECCceEEcCCCE
Confidence                    0000111122221111100                                 11134566777777777777


Q ss_pred             EcCCCCcEECCCc-----------------EECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCC
Q 047635          269 FDHATGVVVGETA-----------------VIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGA  331 (388)
Q Consensus       269 I~~gtgVvIG~~~-----------------~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v  331 (388)
                      |++  +++||.++                 +||+||.||.|++|.+        +++||++|+||+|++|..+  |.+++
T Consensus       225 I~~--gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga~Il~--------gv~IGd~a~IGagsvV~~d--Vp~~s  292 (310)
T 3f1x_A          225 LYQ--GVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNATILG--------RVTIGKGATVGGNIWVTEN--VPAGS  292 (310)
T ss_dssp             EET--TCEEECC--------------CCSCEECTTCEECTTCEEES--------SCEECTTCEECSSCEECSC--BCTTC
T ss_pred             ECC--CCEECCCccccccccccccCCCCCCEECCCcEEcCCCEECC--------CcEECCCCEECCCCEECCc--cCCCc
Confidence            766  66666665                 6777777777776664        5777777777777777765  34444


Q ss_pred             EE
Q 047635          332 KI  333 (388)
Q Consensus       332 ~I  333 (388)
                      ++
T Consensus       293 vv  294 (310)
T 3f1x_A          293 RI  294 (310)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6

Probab=99.64  E-value=2.6e-16  Score=152.69  Aligned_cols=178  Identities=17%  Similarity=0.222  Sum_probs=122.3

Q ss_pred             ccccccccccccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHH
Q 047635          103 EQAIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMG  182 (388)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~  182 (388)
                      .+....++...++...+++|++.+++|.+..+++||++.++++ +++.+++|.+...||+||+|+.....  .+...+..
T Consensus        74 ~~~~~~~~~~~~~~~~~P~i~~~i~~D~~~~~~~DPa~~~~~~-~l~~~~G~~al~~yR~ah~l~~~~r~--~l~~~l~~  150 (289)
T 1t3d_A           74 MPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYST-PLLYLKGFHALQAYRIGHWLWNQGRR--ALAIFLQN  150 (289)
T ss_dssp             SCHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHCTTCCCSHH-HHHHCHHHHHHHHHHHHHHHHHHTCH--HHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHcCCHhHhcccH-HHhhcccHHHHHHHHHHHHHHHcChH--HHHHHHHH
Confidence            3444455667777888899999999999999999999999876 78889999999999999999854221  11111110


Q ss_pred             HhhhcHHHHHHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcE
Q 047635          183 VIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAK  262 (388)
Q Consensus       183 ~l~~~p~i~~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~  262 (388)
                      .          .  ....-...+|.+......+                                 +....++.||++++
T Consensus       151 ~----------~--~~~~g~~I~p~a~IG~gv~---------------------------------I~~g~gvvIG~~~~  185 (289)
T 1t3d_A          151 Q----------V--SVTFQVDIHPAAKIGRGIM---------------------------------LDHATGIVVGETAV  185 (289)
T ss_dssp             H----------H--HHHHSCEECTTCEECSSCE---------------------------------ECSCTTCEECTTCE
T ss_pred             h----------c--eeccceEEcCCCEEcCCEE---------------------------------ECCCCceEECCCcE
Confidence            0          0  0011122233332111111                                 11124678888888


Q ss_pred             ECCceEEcCCCCcEECCC--------cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCE-E
Q 047635          263 IGRGLLFDHATGVVVGET--------AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAK-I  333 (388)
Q Consensus       263 IG~gv~I~~gtgVvIG~~--------~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~-I  333 (388)
                      ||++|.|.+  +++||.+        ++||++|.||.|++|.+        +++||++|+||+|++|.++|  .++++ +
T Consensus       186 IG~~v~I~~--gvtLg~~~~~~~~~~~~IGd~v~IGaga~Ilg--------gv~IG~~a~IGagsvV~~dV--p~~s~v~  253 (289)
T 1t3d_A          186 IENDVSILQ--SVTLGGTGKSGGDRHPKIREGVMIGAGAKILG--------NIEVGRGAKIGAGSVVLQPV--PPHTTAA  253 (289)
T ss_dssp             ECSSCEECT--TCEEECCSSSCSSCSCEECTTCEECTTCEEES--------SCEECTTCEECTTCEECSCB--CTTCEEE
T ss_pred             ECCCCEEcC--CcEECCCccccCCCCeEECCCeEECCCCEEec--------CcEECCCCEECCCCEEccCC--CCCCEEE
Confidence            898888887  7888764        78888888888888875        58999999999999998874  45543 4


Q ss_pred             CCCCEEC
Q 047635          334 GAGSVVL  340 (388)
Q Consensus       334 GagsVV~  340 (388)
                      |..+.+.
T Consensus       254 G~PAr~i  260 (289)
T 1t3d_A          254 GVPARIV  260 (289)
T ss_dssp             TTTTEEE
T ss_pred             ecCCEEe
Confidence            5555444

>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A

Probab=99.64  E-value=7.2e-16  Score=137.66  Aligned_cols=109  Identities=28%  Similarity=0.429  Sum_probs=81.1

Q ss_pred             eeeEecCCcEECCceEEcCC-CCcEECCCcEECCCcEEcC----CCEECCCCccCCC---CCCEECCCcEEccCCEECCC
Q 047635          253 FSVDIHPGAKIGRGLLFDHA-TGVVVGETAVIGDNVSILH----NVTLGGTGKMSGD---RHPKIGNGVLVGAGTCILGN  324 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~g-tgVvIG~~~~IGdnV~Ig~----gvtIgg~~~i~g~---~~~~IGd~V~IGaga~Ilg~  324 (388)
                      ..+.||+++.|+.++.|... ..++||+++.|+++|.|..    +++||.+..+...   .+++||++|+||++++|.++
T Consensus        27 g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~  106 (173)
T 1v3w_A           27 GDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVIIGISSVILDG  106 (173)
T ss_dssp             EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSSEEECTTCEECTT
T ss_pred             CCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCCCEECCCCEEeCC
Confidence            45667777777777776531 1267777777766655542    2444443333221   24799999999999999999


Q ss_pred             cEECCCCEECCCCEEC--CCCCCCcEEEecCcEEeccCC
Q 047635          325 IKIGDGAKIGAGSVVL--KDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       325 V~IGd~v~IGagsVV~--~dVp~~s~VvG~PArvi~~~~  361 (388)
                      ++||++|+||++++|.  .+||+++++.|+||+++++..
T Consensus       107 ~~Ig~~~~Ig~~s~V~~~~~i~~~~~v~G~pa~~~~~~~  145 (173)
T 1v3w_A          107 AKIGDHVIIGAGAVVPPNKEIPDYSLVLGVPGKVVRQLT  145 (173)
T ss_dssp             CEECSSEEECTTCEECTTCEECTTEEEEETTEEEEEECC
T ss_pred             CEECCCCEECCCCEECCCcEeCCCcEEECcCCEEeccCC
Confidence            9999999999999999  468999999999999997643

>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*

Probab=99.64  E-value=3.2e-16  Score=158.26  Aligned_cols=54  Identities=28%  Similarity=0.498  Sum_probs=51.4

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      .++|||+|+||+|++|+++++||++|+||+||+|++|||++++++|+||+++++
T Consensus       397 ~v~Ig~~~~IG~~~~I~~gv~Ig~~~~igagsvV~~~v~~~~~~~G~p~~~~~~  450 (459)
T 4fce_A          397 KTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTVTRDVAENELVISRVKQVHIQ  450 (459)
T ss_dssp             CEEECTTCEECTTCEEESSEEECTTCEECTTCEECSCBCTTCEECCCCCCCCCT
T ss_pred             CCEECCCeEEcCCCEEcCCcEECCCCEECCCCEEccccCCCCEEEecccccchh
Confidence            489999999999999999999999999999999999999999999999987754

>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}

Probab=99.63  E-value=8.6e-16  Score=151.82  Aligned_cols=110  Identities=23%  Similarity=0.373  Sum_probs=90.6

Q ss_pred             eeeEecCCcEECCceEEcCC--CCcEECCCcEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEECCCcE
Q 047635          253 FSVDIHPGAKIGRGLLFDHA--TGVVVGETAVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCILGNIK  326 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~g--tgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Ilg~V~  326 (388)
                      ..+.||.++.||.++.|+.+  .+++||+++.|++++.|+++++||.++.+...    .+++||++|+||++++|.++++
T Consensus       199 g~v~IGd~v~Ig~~~~I~~~~~~~~~Ig~~~~I~~~v~I~~~v~IG~~~~i~~~~~i~g~v~IG~~~~Ig~~s~V~~~v~  278 (341)
T 3eh0_A          199 GRVIIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHME  278 (341)
T ss_dssp             CCEEECSSCEECTTCEEECCSSSCEEECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEE
T ss_pred             CcEEECCCcEECCccEeeccccCceEeccceEECCCCEEeCCcEECCCCEECCCCEECCCcEECCCcEEcCCCEECCCCE
Confidence            35778888888888888743  26777777777777777777777766555432    3689999999999999999999


Q ss_pred             ECCCCEECCCCEECCCCC-CCcEEEecCcEEeccCCC
Q 047635          327 IGDGAKIGAGSVVLKDVP-PRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       327 IGd~v~IGagsVV~~dVp-~~s~VvG~PArvi~~~~~  362 (388)
                      ||++++|+++++|.+|+| +++++.|+||+.++++.+
T Consensus       279 Ig~~~vv~a~s~V~~~v~~~~~~~~G~Pa~~~~~~~~  315 (341)
T 3eh0_A          279 ICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRK  315 (341)
T ss_dssp             ECSSEEECTTCEECSCBCSCEEEECCCCCEEHHHHHH
T ss_pred             ECCCCEEeeCCEECCCcCCCCeEEEecCchhHHHHHH
Confidence            999999999999999998 999999999999987653

>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*

Probab=99.62  E-value=5.8e-16  Score=156.30  Aligned_cols=54  Identities=30%  Similarity=0.487  Sum_probs=52.1

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      .++||++|+||+||+|.++++||++|+||+||+|.+|||++++++|+||+++++
T Consensus       394 ~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~s~v~~~v~~~~~~~G~pa~~~~~  447 (456)
T 2v0h_A          394 KTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTITRDVGENELVITRVAQRHIQ  447 (456)
T ss_dssp             CEEECSSCEECTTCEEEESEEECTTCEECTTCEECSCBCTTCEECCCCCCCCCT
T ss_pred             CcEECCCCEECCCCEEcCCcEECCCCEECCCCEECCCcCCCCEEEccCceehhh
Confidence            689999999999999999999999999999999999999999999999999974

>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*

Probab=99.62  E-value=1.6e-15  Score=151.45  Aligned_cols=108  Identities=30%  Similarity=0.351  Sum_probs=81.9

Q ss_pred             eEecCCcEECCceEEcCCC--CcEECCCcEECCCcEEcCCCEECCCCccCC----CCCCEECCCcEEccCCEECCCcEEC
Q 047635          255 VDIHPGAKIGRGLLFDHAT--GVVVGETAVIGDNVSILHNVTLGGTGKMSG----DRHPKIGNGVLVGAGTCILGNIKIG  328 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gt--gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Ilg~V~IG  328 (388)
                      +.||.+++||.|+.|+.++  .++||+++.|+++|.|+++|+||.++.+..    ..+++||++|+||.++.|.++++||
T Consensus       229 v~Ig~~v~IG~~~~I~~~~~~~t~ig~~~~i~~~v~I~~~v~IG~~~~i~~~~~v~~~~~Ig~~~~Ig~~~~i~~~v~Ig  308 (374)
T 2iu8_A          229 VIIEDDVEIGANTTIDRGRFKHSVVREGSKIDNLVQIAHQVEVGQHSMIVAQAGIAGSTKIGNHVIIGGQAGITGHICIA  308 (374)
T ss_dssp             EEECTTCEECTTCEEEECSSSCEEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEEC
T ss_pred             EEECCCCEECCCcEEccCcccceeECCCcEECCccccCCccEECCCCEEccCcccCCCcEECCCeEEecCcEECCCcccC
Confidence            5566666666666664321  345555555555555566666666555433    1468999999999999999999999


Q ss_pred             CCCEECCCCEECCCCCCCcEEEecCcEEeccCCC
Q 047635          329 DGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       329 d~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~  362 (388)
                      ++|+||++++|.+|||+++++.|+||++++.+.+
T Consensus       309 ~~~~I~a~s~V~~~v~~~~~~~G~pa~~~~~~~~  342 (374)
T 2iu8_A          309 DHVIMMAQTGVTKSITSPGIYGGAPARPYQEIHR  342 (374)
T ss_dssp             TTEEECTTCEECSCBCSCEEEEETTEEEHHHHHH
T ss_pred             CCcEEccCceeecccCCCcEEeCCCCchhHHHHH
Confidence            9999999999999999999999999999877543

>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}

Probab=99.62  E-value=7.9e-16  Score=154.09  Aligned_cols=109  Identities=21%  Similarity=0.410  Sum_probs=91.6

Q ss_pred             eeEecCCcEECCceEEcCC--CCcEECCCcEECCCcEEcCCCEECCCCccCC----CCCCEECCCcEEccCCEECCCcEE
Q 047635          254 SVDIHPGAKIGRGLLFDHA--TGVVVGETAVIGDNVSILHNVTLGGTGKMSG----DRHPKIGNGVLVGAGTCILGNIKI  327 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~g--tgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Ilg~V~I  327 (388)
                      .+.||.++.||.++.|+.+  .+++||+++.|++++.|+++++||.++.+..    ..+++||++|+||+++.|.++++|
T Consensus       222 ~v~IGd~v~IGa~~~I~~g~~~~t~IG~~~~I~~~v~I~~~v~IG~~~~I~~~~~I~~~v~IG~~~~Ig~~a~V~~~v~I  301 (372)
T 3pmo_A          222 GVTIGDDVEIGANTTIDRGALSDTLIGNGVKLDNQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGLVGHIEI  301 (372)
T ss_dssp             CEEECSSCEECTTCEEECCSSSCEEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEE
T ss_pred             CeEECCCCEECCCcEEccCcccceEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCeEEeCCCEECCCCEE
Confidence            5777778888888877643  3678888888888888888888877665544    246899999999999999999999


Q ss_pred             CCCCEECCCCEECCCC-CCCcEEEecCcEEeccCCC
Q 047635          328 GDGAKIGAGSVVLKDV-PPRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       328 Gd~v~IGagsVV~~dV-p~~s~VvG~PArvi~~~~~  362 (388)
                      |++|+|+++++|.+|| |+++++.|+||+.++++.+
T Consensus       302 g~~~vI~a~s~V~k~v~~~~~~~~G~Pa~~~~~~~~  337 (372)
T 3pmo_A          302 CDNVFVTGMTMVTRSITEPGSYSSGTAMQPAAEWKK  337 (372)
T ss_dssp             CSSEEECTTCEECSCBCSCEEECCSCCCCCHHHHHH
T ss_pred             CCCCEEeeCCEEccCcCCCCcEEEeCchHHHHHHHH
Confidence            9999999999999999 9999999999999986543

>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A

Probab=99.59  E-value=3.4e-15  Score=148.65  Aligned_cols=109  Identities=22%  Similarity=0.341  Sum_probs=90.6

Q ss_pred             eeEecCCcEECCceEEcCC--CCcEECCCcEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEECCCcEE
Q 047635          254 SVDIHPGAKIGRGLLFDHA--TGVVVGETAVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCILGNIKI  327 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~g--tgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Ilg~V~I  327 (388)
                      .+.||.++.||.++.|+.+  ..++||+++.|+++|.|+++|+||.++.+...    .+++||++|+||+++.|.++++|
T Consensus       205 ~v~IGd~v~IG~~~~I~~g~~~~t~Ig~~~~I~~~v~I~~~v~IG~~~~i~~~~~i~~~v~IG~~~~Ig~~s~V~~~~~I  284 (357)
T 4e79_A          205 SVLIGNDVRIGSNCSIDRGALDNTILEDGVIIDNLVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAGHLSI  284 (357)
T ss_dssp             CEEECTTCEECTTCEECCCSSSCEEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEE
T ss_pred             cEEEcCCcEEccccEEeccccCCccccCCcccCCCcccCCCeEECCCCEECCCCEECCCcEECCCCEECcCCEECCCeEE
Confidence            5778888888888888754  36777877777777777777777776555432    36899999999999999999999


Q ss_pred             CCCCEECCCCEECCCC-CCCcEEEecCcEEeccCCC
Q 047635          328 GDGAKIGAGSVVLKDV-PPRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       328 Gd~v~IGagsVV~~dV-p~~s~VvG~PArvi~~~~~  362 (388)
                      |++++|+++++|.+|+ |+++++.|+||+.++++.+
T Consensus       285 g~~~vv~g~s~V~~~v~~~~~~~~G~Pa~~~~~~~~  320 (357)
T 4e79_A          285 ADNVTLTGMSMVTKNISEAGTYSSGTGLFENNHWKK  320 (357)
T ss_dssp             CSSEEECTTCEECSCBCSCEEEECSCCCEEHHHHHH
T ss_pred             CCCCEEeecCEEcCccCCCCcEEEeCchHHHHHHHH
Confidence            9999999999999999 9999999999999976543

>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*

Probab=99.58  E-value=3.1e-15  Score=151.85  Aligned_cols=54  Identities=33%  Similarity=0.658  Sum_probs=51.8

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      .++||++|+||+||+|.++++||++|+||+|++|.+|||++++++|+||++++.
T Consensus       402 ~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~i~~~s~v~~~v~~~~~~~G~pa~~~~~  455 (468)
T 1hm9_A          402 KTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIGRGRQINKD  455 (468)
T ss_dssp             CEEECTTCEECTTCEEESSCEECTTCEECTTCEECSCBCTTCEECCSCCCCCCT
T ss_pred             CcEECCCeEECCCCEEeCCcEECCCCEECCCCEECCCCCCCCEEEcCcceeehh
Confidence            589999999999999999999999999999999999999999999999999863

>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A

Probab=99.53  E-value=5.1e-15  Score=136.22  Aligned_cols=110  Identities=20%  Similarity=0.259  Sum_probs=83.2

Q ss_pred             ceeeeeEecCCcEECCceEEcCC--CCcEECCCcEECCCcEEcC--------------CCEECCCCccCCC----CCCEE
Q 047635          250 SEVFSVDIHPGAKIGRGLLFDHA--TGVVVGETAVIGDNVSILH--------------NVTLGGTGKMSGD----RHPKI  309 (388)
Q Consensus       250 ~~~~gV~Ig~~a~IG~gv~I~~g--tgVvIG~~~~IGdnV~Ig~--------------gvtIgg~~~i~g~----~~~~I  309 (388)
                      ....++.||+++.|+.++.|...  ..++||+++.||++|.|..              +++||.+..+...    .+++|
T Consensus        53 ~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~~~~I~~~v~I  132 (213)
T 3kwd_A           53 NLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITHMALIHGPAYI  132 (213)
T ss_dssp             EEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECTTCEEEEEEEE
T ss_pred             EEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECCCcEEcCCCEE
Confidence            33456778888888888877553  2478888888888776642              2444444433321    13899


Q ss_pred             CCCcEEccCCEECCCcEECCCCEECCCCEE-------CCCCCCCcEEE-ecCcEEeccC
Q 047635          310 GNGVLVGAGTCILGNIKIGDGAKIGAGSVV-------LKDVPPRTTAV-GNPARLIGGK  360 (388)
Q Consensus       310 Gd~V~IGaga~Ilg~V~IGd~v~IGagsVV-------~~dVp~~s~Vv-G~PArvi~~~  360 (388)
                      |++|+||++++|.+ ++||++|+||+|++|       ..+||+++++. |+||+.+++.
T Consensus       133 g~~v~IG~~a~I~~-~~Ig~~~~Igags~V~~~~i~~~~~v~~~~vv~~g~pa~~i~~~  190 (213)
T 3kwd_A          133 GDGCFIGFRSTVFN-ARVGAGCVVMMHVLIQDVEIPPGKYVPSGMVITTQQQADRLPNV  190 (213)
T ss_dssp             CTTCEECTTCEEEE-EEECTTCEECSSCEEESCEECTTBEECTTCEECSHHHHTTCCBC
T ss_pred             CCCCEECCCCEEeC-cEECCCCEEcCCCEECCcEeCCCCEECCCcEEcCCCCccccccC
Confidence            99999999999986 999999999999999       56789999999 9999988764

>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*

Probab=99.49  E-value=2.2e-13  Score=125.77  Aligned_cols=107  Identities=21%  Similarity=0.406  Sum_probs=87.0

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEEC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIG  334 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IG  334 (388)
                      ..+++++.||+++.|.+  +++|+.+++||++|.|+.+++|+.        +++||++|+|+++++|.++++||++|+||
T Consensus       106 a~i~~~v~IG~g~~I~~--~~~i~~~~~IG~~~~I~~~~~I~~--------~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig  175 (220)
T 4ea9_A          106 AVVSPSVRLGEGVAVMA--GVAINADSWIGDLAIINTGAVVDH--------DCRLGAACHLGPASALAGGVSVGERAFLG  175 (220)
T ss_dssp             CEECTTCEECSSCEECT--TCEECTTCEECTTCEECTTCEECT--------TCEECTTCEECTTCEECSSCEECTTCEEC
T ss_pred             CEECCCCEECCCCEEcC--CCEECCCCEECCCCEECCCCEECC--------CCEECCCCEECCCCEEcCCCEECCCCEEC
Confidence            44566666666666665  677777777777777777777764        68999999999999999999999999999


Q ss_pred             CCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCc
Q 047635          335 AGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSF  372 (388)
Q Consensus       335 agsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~  372 (388)
                      ++++|.+++  .+++ ++|..+.+.+..+......++|++
T Consensus       176 ~~~~i~~~~~Ig~~~-~igagsvv~~~v~~~~~~~G~Pa~  214 (220)
T 4ea9_A          176 VGARVIPGVTIGADT-IVGAGGVVVRDLPDSVLAIGVPAK  214 (220)
T ss_dssp             TTCEECTTCEECTTC-EECTTCEECSCBCTTCEEETTTTE
T ss_pred             CCCEEcCCcEECCCC-EECCCCEEccccCCCcEEEEeCCE
Confidence            999999985  5554 558888998888887777899998

>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*

Probab=99.49  E-value=2.7e-14  Score=147.29  Aligned_cols=75  Identities=33%  Similarity=0.520  Sum_probs=60.8

Q ss_pred             cEEcCCCEECCCCccCC-----CCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEE-EecCcEEeccC
Q 047635          287 VSILHNVTLGGTGKMSG-----DRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTA-VGNPARLIGGK  360 (388)
Q Consensus       287 V~Ig~gvtIgg~~~i~g-----~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~V-vG~PArvi~~~  360 (388)
                      +.||++|.||.+....+     ..+++|||+|+||.++.|.++|+||++|+||+||+|++|||+++++ .|.|++.+..|
T Consensus       387 ~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~~v~Ig~~~~i~ags~v~~dvp~~~l~~~~~~~~~~~~w  466 (501)
T 3st8_A          387 ADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVVREDVPPGALAVSAGPQRNIENW  466 (501)
T ss_dssp             EEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEECSCBCTTCEECCCCCCCCCTTH
T ss_pred             ceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEEcCCcEECCCCEECCCCEECcccCCCCeEEeccCceeccch
Confidence            34566666665543322     1348999999999999999999999999999999999999999975 56999998765


Q ss_pred             C
Q 047635          361 E  361 (388)
Q Consensus       361 ~  361 (388)
                      .
T Consensus       467 ~  467 (501)
T 3st8_A          467 V  467 (501)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A

Probab=99.49  E-value=3.6e-13  Score=122.49  Aligned_cols=108  Identities=25%  Similarity=0.336  Sum_probs=83.8

Q ss_pred             eEecCCcEEC--CceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCE
Q 047635          255 VDIHPGAKIG--RGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAK  332 (388)
Q Consensus       255 V~Ig~~a~IG--~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~  332 (388)
                      ..|++++.||  +++.|.+  +++|+.+++||++|.|+.+++|+.        +++||++|+|+++++|.++++||++|+
T Consensus        82 a~i~~~~~Ig~~~g~~I~~--~~~I~~~~~IG~~~~I~~~~~i~~--------~~~Ig~~~~I~~~~~i~~~~~Ig~~~~  151 (194)
T 3bfp_A           82 ALISPSAIVEENAGILIMP--YVVINAKAKIEKGVILNTSSVIEH--------ECVIGEFSHVSVGAKCAGNVKIGKNCF  151 (194)
T ss_dssp             CEECTTCEECTTSCCEECT--TCEECTTCEECTTCEECTTCEECT--------TCEECTTCEECTTCEECTTCEECTTCE
T ss_pred             EEECCCceeCCCCCcEEcC--CCEECCCCEECCCCEECCCCEEcC--------CCEECCCCEECCCCEECCCcEECCCCE
Confidence            4455555555  5666655  566666666666666666666653        689999999999999999999999999


Q ss_pred             ECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcc
Q 047635          333 IGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFT  373 (388)
Q Consensus       333 IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~  373 (388)
                      ||++++|.+++  ++++ ++|..+.+.+....+....++|++.
T Consensus       152 Ig~~~~i~~~~~Ig~~~-~Igagsvv~~~v~~~~~~~G~Pa~~  193 (194)
T 3bfp_A          152 LGINSCVLPNLSLADDS-ILGGGATLVKNQDEKGVFVGVPAKR  193 (194)
T ss_dssp             ECTTCEECTTCEECTTC-EECTTCEECSCBCSCCEECCCCCCC
T ss_pred             EcCCCEECCCCEECCCC-EECCCCEEccccCCCCEEEeeccEE
Confidence            99999999885  6665 4588899988888777778999864

>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*

Probab=99.47  E-value=7.1e-14  Score=136.50  Aligned_cols=78  Identities=23%  Similarity=0.330  Sum_probs=60.1

Q ss_pred             cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC----CCCC------cEEE
Q 047635          281 AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD----VPPR------TTAV  350 (388)
Q Consensus       281 ~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d----Vp~~------s~Vv  350 (388)
                      ++||++|.|+++++|++.........++|||+|+||+|++|  +++||++|+||+|++|.+|    ++++      .+..
T Consensus       208 v~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv~IGanAtI--gVtIGd~~iIGAGSVVtkdt~I~~~~g~~v~a~el~g  285 (332)
T 3fsy_A          208 VVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGL--GISLGDDCVVEAGLYVTAGTRVTMPDSNSVKARELSG  285 (332)
T ss_dssp             CEECTTCEECTTCEECSBCC---CCBCEECTTCEECTTCEE--CSCBCSSCEECTTCEECTTCEEECTTSCEEEGGGGTT
T ss_pred             eEECCCCEECCCCEEcCCCCCCCccceEECCCCEECCCCEE--eeEECCCCEECCCCEECCCCEEEeCCCCEEEhHHhcC
Confidence            56888888888888877544444456999999999999999  9999999999999999998    3444      4444


Q ss_pred             ecCcEEeccC
Q 047635          351 GNPARLIGGK  360 (388)
Q Consensus       351 G~PArvi~~~  360 (388)
                      ++|+.+.++-
T Consensus       286 ~~~~~f~r~s  295 (332)
T 3fsy_A          286 SSNLLFRRNS  295 (332)
T ss_dssp             CSSEEEEECT
T ss_pred             CCCCEEEecC
Confidence            6777776543

>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*

Probab=99.47  E-value=1.7e-13  Score=136.27  Aligned_cols=45  Identities=36%  Similarity=0.351  Sum_probs=36.8

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEE
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAV  350 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~Vv  350 (388)
                      .++||++|+||+||+|.++++||++|+||+|++|.+|||++++++
T Consensus       356 ~v~Ig~~~~Ig~~~~I~~gv~Ig~~~vi~~gsvv~~~vp~~~~v~  400 (401)
T 2ggo_A          356 GAFIGGHVRTGINVTILPGVKIGAYARIYPGAVVNRDVGYGEFFK  400 (401)
T ss_dssp             CCEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTCEEC
T ss_pred             CcEECCCeEECCCcEEcCCcEECCCcEECCCCeEccccCCCcEEe
Confidence            578888888888888888888888888888888888888887764

>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*

Probab=99.44  E-value=1.9e-13  Score=124.73  Aligned_cols=121  Identities=12%  Similarity=0.170  Sum_probs=83.6

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEE------cCCCEECCCCccCCC-CCCEECCCcEEccCCEE------
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSI------LHNVTLGGTGKMSGD-RHPKIGNGVLVGAGTCI------  321 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~I------g~gvtIgg~~~i~g~-~~~~IGd~V~IGaga~I------  321 (388)
                      ..||+++.|++++.|..+.+++||+++.|+++|.|      |.+|.|+.+..+.+. .+++||++|+||++++|      
T Consensus        33 ~~ig~~~~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~  112 (205)
T 3vbi_A           33 LSVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDD  112 (205)
T ss_dssp             SEECSSEEEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEECC
T ss_pred             eEECCCCEECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCC
Confidence            34555555555555554334555555544444443      444444444444322 24899999999999999      


Q ss_pred             -------------------CCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          322 -------------------LGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       322 -------------------lg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                                         .++++||++|+||++++|.+++  .++++ +|..+.+.+.........+.|++.++.
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~-Ig~gsvV~~~v~~~~v~~G~Pa~~i~~  187 (205)
T 3vbi_A          113 FSGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVA-VGAMSMVKESLDDWYIYVGVPVRKIKA  187 (205)
T ss_dssp             CSSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSSCEECTTCE-ECTTCEECSCBCTTEEEETTTTEEEEE
T ss_pred             cccccccCcccccccceeccCCEEECCCCEECCCCEEcCCCEECCCCE-EcCCCEECCccCCCeEEEccCCEEeee
Confidence                               5899999999999999999985  66654 677788888877777678899977654

>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*

Probab=99.43  E-value=7.3e-13  Score=119.46  Aligned_cols=102  Identities=20%  Similarity=0.303  Sum_probs=64.4

Q ss_pred             CcEECCCcEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEEC---------------CCcEECCCCEEC
Q 047635          274 GVVVGETAVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCIL---------------GNIKIGDGAKIG  334 (388)
Q Consensus       274 gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Il---------------g~V~IGd~v~IG  334 (388)
                      ++.||+++.||+++.|+++++||.++.+...    .+++||++|+||+++.+.               ++++||++|+||
T Consensus        33 ~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~v~IG  112 (192)
T 3mqg_A           33 GAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNVYNPRAAIERKSEYRDTIVRQGATLG  112 (192)
T ss_dssp             TCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTTCBCCSCSSCBTTBCCGGGCCCEEECTTCEEC
T ss_pred             CcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCceEEecccCCccccccccccCCcEECCCcEEC
Confidence            4455555555444444444444443333221    235556666666655543               457899999999


Q ss_pred             CCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          335 AGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       335 agsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      ++++|.+++  .+++ ++|..+.+.+..+......+.|++.++.
T Consensus       113 ~~~~I~~g~~Ig~~~-~IgagsvV~~~vp~~~v~~G~PAk~i~~  155 (192)
T 3mqg_A          113 ANCTVVCGATIGRYA-FVGAGAVVNKDVPDFALVVGVPARQIGW  155 (192)
T ss_dssp             TTCEECTTCEECTTC-EECTTCEECSCBCTTEEEETTTTEEEEE
T ss_pred             CCCEECCCCEECCCC-EEcCCCEECcccCCCCEEEccCCEEEEe
Confidence            999999885  6655 4566788887777777678899876543

>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A

Probab=99.42  E-value=4e-13  Score=132.05  Aligned_cols=61  Identities=25%  Similarity=0.375  Sum_probs=48.2

Q ss_pred             cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC
Q 047635          281 AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV  343 (388)
Q Consensus       281 ~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV  343 (388)
                      ++||++|.|++||+|++.........++|||+|+||+|++|  +++||++|+||+|++|.+|+
T Consensus       231 v~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~IGAnAtI--GVtIGd~~iIGAGSVVtkdt  291 (347)
T 3r5d_A          231 VFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGI--GIPLGDRNIVEAGLYITAGT  291 (347)
T ss_dssp             CEECTTEEECTTCEECC------CCCCEECTTCEECTTCEE--CSCBCTTCEECTTCEECTTC
T ss_pred             EEECCCCEECCCCEEccccCCCCccceEECCCCEECCCCEE--eeEECCCCEECCCCEECCCC
Confidence            56777777777777776433333456899999999999999  99999999999999999995

>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}

Probab=99.41  E-value=6e-13  Score=131.42  Aligned_cols=71  Identities=23%  Similarity=0.305  Sum_probs=57.0

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECC--CCCCCcEEEecCcEEeccCC-CCccccCCCCccccc
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK--DVPPRTTAVGNPARLIGGKE-NPFMLDKIPSFTMDH  376 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~--dVp~~s~VvG~PArvi~~~~-~~~~~~~~p~~~~~~  376 (388)
                      ++++||++|+|++++.|.++++||++|+||++++|.+  +|++++++.|. +.+.+... ......+.|++.+++
T Consensus       239 ~~v~IG~~~~i~~~~~i~g~v~IG~~~~Ig~~s~V~~~v~Ig~~~vv~a~-s~V~~~v~~~~~~~~G~Pa~~~~~  312 (341)
T 3eh0_A          239 HNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGM-GMVMRPITEPGVYSSGIPLQPNKV  312 (341)
T ss_dssp             TTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECSSEEECTT-CEECSCBCSCEEEECCCCCEEHHH
T ss_pred             CCcEECCCCEECCCCEECCCcEECCCcEEcCCCEECCCCEECCCCEEeeC-CEECCCcCCCCeEEEecCchhHHH
Confidence            3578888888888899999999999999999999999  57999998888 55666655 333336899877654

>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A

Probab=99.41  E-value=5.7e-13  Score=132.56  Aligned_cols=71  Identities=20%  Similarity=0.224  Sum_probs=55.9

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECC--CCCCCcEEEecCcEEeccC-CCCccccCCCCccccc
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK--DVPPRTTAVGNPARLIGGK-ENPFMLDKIPSFTMDH  376 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~--dVp~~s~VvG~PArvi~~~-~~~~~~~~~p~~~~~~  376 (388)
                      ++++||++|+|++++.|.++++||++|+||++++|..  +|++++++.|.|+. .+.. .......+.|+..+++
T Consensus       244 ~~v~IG~~~~i~~~~~i~~~v~IG~~~~Ig~~s~V~~~~~Ig~~~vv~g~s~V-~~~v~~~~~~~~G~Pa~~~~~  317 (357)
T 4e79_A          244 HNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAGHLSIADNVTLTGMSMV-TKNISEAGTYSSGTGLFENNH  317 (357)
T ss_dssp             TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSEEECTTCEE-CSCBCSCEEEECSCCCEEHHH
T ss_pred             CCeEECCCCEECCCCEECCCcEECCCCEECcCCEECCCeEECCCCEEeecCEE-cCccCCCCcEEEeCchHHHHH
Confidence            3578888888888888889999999999999999996  57999999998664 4444 4444446889876643

>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}

Probab=99.40  E-value=1.3e-12  Score=125.54  Aligned_cols=69  Identities=19%  Similarity=0.220  Sum_probs=56.7

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccc
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTM  374 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~  374 (388)
                      ++++||++|+|+.+++|.++++||++|+||++++|.+++  ++++++.+. +.+.+.........+.|++..
T Consensus       142 ~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~vvg~~-s~V~~dvp~~~~~~G~pa~~~  212 (283)
T 4eqy_A          142 HDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQYVRIGAHSMLGGA-SALVQDIPPFVIAAGNKAEPH  212 (283)
T ss_dssp             TTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT-CEECSBBCTTEEEETBTTEEE
T ss_pred             CCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCCeEECCCcEECCC-CeEecccCCCcEEeccCcEEe
Confidence            467899999999999999999999999999999999996  888877654 666666665555578887654

>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*

Probab=99.39  E-value=1.9e-12  Score=121.22  Aligned_cols=111  Identities=26%  Similarity=0.354  Sum_probs=77.1

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCC--------cE
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGN--------IK  326 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~--------V~  326 (388)
                      +.|++++.||+++.|+.  +++|+.+++||++|.|+.++.|++        +++||++|.||++++|.+.        ++
T Consensus        98 a~I~~~v~Ig~~~~I~~--~s~I~~~~~IG~~~~I~~~~~I~~--------~~~IG~~~~I~~~~~i~~~~~~~~~~~~~  167 (240)
T 3r8y_A           98 AIIRDHVEIGDNAVIMM--NATINIGAVIGEGSMIDMNAVLGG--------RATVGKNCHVGAGAVLAGVIEPPSAKPVI  167 (240)
T ss_dssp             CEEBSSCEECTTCEECT--TCEECTTCEECTTCEECTTCEECT--------TCEECTTCEECTTCEECCCCSCTTSCCCE
T ss_pred             CEECCCcEECCCCEECC--CCEECCCCEECCCCEECCCCEECC--------CCEECCCcEECCCcEECCCccCCCCCCcE
Confidence            33444444444444443  455555555555555555555554        6899999999999999763        99


Q ss_pred             ECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          327 IGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       327 IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      ||++|+||++++|.+++  ..++ ++|..+.+.+.........+.|++.++.
T Consensus       168 Ig~~~~IG~~~~I~~~~~Ig~~~-~I~~gsvV~~~vp~~~v~~G~Pak~i~~  218 (240)
T 3r8y_A          168 VEDDVVIGANVVVLEGVTVGKGA-VVAAGAVVTEDVPPYTVVAGTPARVIKE  218 (240)
T ss_dssp             ECTTCEECTTCEECTTCEECTTC-EECTTCEECSCBCTTEEEEETTEEEEEE
T ss_pred             ECCCCEECCCCEECCCcEECCCC-EECCCCEECCCcCCCcEEEccCCEEEec
Confidence            99999999999998774  5544 5677788877777777667889876544

>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A

Probab=99.39  E-value=2.5e-13  Score=128.12  Aligned_cols=96  Identities=15%  Similarity=0.237  Sum_probs=67.4

Q ss_pred             eeeEecCCcEECCceEEcCCC--CcEECCCcEECCCcEEcCC-----------------------CEECCCCccCCC---
Q 047635          253 FSVDIHPGAKIGRGLLFDHAT--GVVVGETAVIGDNVSILHN-----------------------VTLGGTGKMSGD---  304 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gt--gVvIG~~~~IGdnV~Ig~g-----------------------vtIgg~~~i~g~---  304 (388)
                      .++.||+++.|++++.|....  .++||+++.||++|+|..+                       +.||.+..+...   
T Consensus        76 g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~v~Ig~~~~I  155 (247)
T 1qre_A           76 GEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQV  155 (247)
T ss_dssp             ESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEECTTCEECTTCEE
T ss_pred             CCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCccCceEECCCCEECCCCEE
Confidence            456677777777777665532  4577887777777776532                       455554443322   


Q ss_pred             -CCCEECCCcEEccCCEECCCcEECCCCEECCCCEE-CCCCCCCcEE
Q 047635          305 -RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV-LKDVPPRTTA  349 (388)
Q Consensus       305 -~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV-~~dVp~~s~V  349 (388)
                       .+++||++|+||+|++|.+ ++||++|+||+|++| ..+||+++++
T Consensus       156 ~~~~~Ig~~v~IG~~a~I~~-v~Ig~~~~IgagsvV~~~~I~~~~~v  201 (247)
T 1qre_A          156 HGPAAVGDDTFIGMQAFVFK-SKVGNNCVLEPRSAAIGVTIPDGRYI  201 (247)
T ss_dssp             EEEEEECTTCEECTTCEEEE-EEECTTCEECTTCEEESCEECTTBEE
T ss_pred             cCCcEECCCCEECCCCEEec-eEECCCCEECCCCEECCeEeCCCCEE
Confidence             1378999999999999998 999999999999999 3334665554

>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}

Probab=99.39  E-value=1.1e-12  Score=131.35  Aligned_cols=71  Identities=15%  Similarity=0.150  Sum_probs=56.6

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC--CCCCcEEEecCcEEeccC-CCCccccCCCCccccc
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGGK-ENPFMLDKIPSFTMDH  376 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~~-~~~~~~~~~p~~~~~~  376 (388)
                      .+++||++|+|++++.|.++++||++|+||++++|.++  |++++++.|.+. +.+.. +.+....+.|++.+++
T Consensus       261 ~~v~IG~~~~I~~~~~I~~~v~IG~~~~Ig~~a~V~~~v~Ig~~~vI~a~s~-V~k~v~~~~~~~~G~Pa~~~~~  334 (372)
T 3pmo_A          261 HNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGLVGHIEICDNVFVTGMTM-VTRSITEPGSYSSGTAMQPAAE  334 (372)
T ss_dssp             TTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECSSEEECTTCE-ECSCBCSCEEECCSCCCCCHHH
T ss_pred             CCCEECCCCEECCCCEECCCCEECCCeEEeCCCEECCCCEECCCCEEeeCCE-EccCcCCCCcEEEeCchHHHHH
Confidence            35778888888888888899999999999999999997  699999888766 44554 4455557899887654

>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*

Probab=99.38  E-value=2.3e-12  Score=122.10  Aligned_cols=69  Identities=17%  Similarity=0.196  Sum_probs=57.8

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccc
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTM  374 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~  374 (388)
                      ++++||++|+|+.++.|.++++||++|+||++++|.+++  ++++++ |..+.+.+..+......+.|++..
T Consensus       120 ~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~V-g~~s~V~~dvp~~~~~~G~pa~~~  190 (259)
T 3hsq_A          120 HDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFVGDYSMV-AGLAKVVQDVPPYSTVDGNPSTVV  190 (259)
T ss_dssp             TTCEECSSCEECTTCEECTTCEECSSCEECSSEEECTTCEECTTCEE-CSSEEECSBBCTTEEEETTTTEEE
T ss_pred             CCcEECCccEEcCCceECCccEECCCcEEeCCCEECCCCEECCCCEE-CCCCEEcccCCCCcEEeccCcEEE
Confidence            357888999999999999999999999999999999997  888766 556888777776666678898664

>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0

Probab=99.37  E-value=2e-12  Score=123.22  Aligned_cols=68  Identities=13%  Similarity=0.181  Sum_probs=56.2

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcc
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFT  373 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~  373 (388)
                      .+++||++|+|+.+++|.++++||++|+||++++|.+++  ++++++.|.+ .+.++.+......+.|++.
T Consensus       125 ~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~a~Vg~~s-~V~~dvp~~~~~~G~Pa~~  194 (266)
T 3r0s_A          125 HDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVKVGEGCMIAGAS-ALSQDIVPFCLAEGNRASI  194 (266)
T ss_dssp             TTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSC-BBCSCBCTTEEEEEBTEEE
T ss_pred             cccccCCCeEECCCceecCCeEECCCcEEccCCEECCCcEECCCCEEccCC-eEecccCCCeEEeccCcEE
Confidence            468999999999999999999999999999999999997  9998887654 4555555555556788765

>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*

Probab=99.37  E-value=3.5e-12  Score=121.09  Aligned_cols=69  Identities=14%  Similarity=0.237  Sum_probs=56.9

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccc
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTM  374 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~  374 (388)
                      .+++||++|+|+.++.|.++++||++|+||++++|.+++  ++++++.+ .+.+.++.+......+.|++..
T Consensus       127 ~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~i~~-~svV~~dvp~~~~~~G~pa~~~  197 (265)
T 4e6u_A          127 HDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGG-ASLILKDVPAYVMASGNPAHAF  197 (265)
T ss_dssp             TTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECT-TCEECSBBCTTEEEEETTEEEE
T ss_pred             ccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEECCCcEECCCCEEcC-CCEEcccCCCCeEEEccCCEEe
Confidence            467899999999999999999999999999999999996  88877655 5777776665555578887654

>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1

Probab=99.36  E-value=3.9e-12  Score=121.67  Aligned_cols=69  Identities=20%  Similarity=0.261  Sum_probs=56.4

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccc
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTM  374 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~  374 (388)
                      .+++||++|+|+.++.|.++++||++|+||++++|.+++  ++++++.+ .+.+.++........+.|++..
T Consensus       121 ~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~IG~~a~Ig~-~s~V~~dvp~~~~~~G~pa~~~  191 (270)
T 1j2z_A          121 HDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAKGCMIAG-KSALGKDVPPYCTVEGNRAFIR  191 (270)
T ss_dssp             TTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECT-TCEECSBBCTTEEEETTBTEEE
T ss_pred             CCcEECCCcEEcCCccccCccEECCCeEEecCCEECCCcEeCCceEEec-CcEecccCCCCeEEecCCcEEe
Confidence            357888888888888999999999999999999999985  78876655 5888877766666678888665

>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}

Probab=99.34  E-value=4.3e-12  Score=113.83  Aligned_cols=93  Identities=23%  Similarity=0.274  Sum_probs=64.7

Q ss_pred             EECCCcEEcCCCEECCCCccC---CCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEE
Q 047635          282 VIGDNVSILHNVTLGGTGKMS---GDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARL  356 (388)
Q Consensus       282 ~IGdnV~Ig~gvtIgg~~~i~---g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArv  356 (388)
                      .||++|.|+.+++|.......   ...+++||++|+||++++|.+ ++||++|+||++++|.+++  .+++ ++|..+.+
T Consensus        60 ~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~i~~~v~Ig~~~-~Ig~~s~V  137 (189)
T 3r1w_A           60 RIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHG-CTIGNRVLIGMKSMIMDGAIVEDEV-IVAAGATV  137 (189)
T ss_dssp             EECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEES-CEECSSEEECTTCEECTTCEECSSC-EECTTCEE
T ss_pred             EECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeC-cEECCCcEECCCCEEcCCCEECCCC-EEccCCEE
Confidence            445555555555554321110   123679999999999999875 9999999999999999884  6654 56666777


Q ss_pred             e--ccCCCCccccCCCCccccc
Q 047635          357 I--GGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       357 i--~~~~~~~~~~~~p~~~~~~  376 (388)
                      .  ..........+.|++.++.
T Consensus       138 ~~g~~i~~~~vv~G~pa~~i~~  159 (189)
T 3r1w_A          138 SPGKVLESGFVYMGTPAKKVRP  159 (189)
T ss_dssp             CTTCEECTTEEEETTTTEEEEE
T ss_pred             CCCCEeCCCCEEECCccccccC
Confidence            7  4455555557889876654

>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A

Probab=99.33  E-value=1.9e-12  Score=116.07  Aligned_cols=93  Identities=23%  Similarity=0.280  Sum_probs=65.5

Q ss_pred             EECCCcEEcCCCEECCCCcc---CCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEE
Q 047635          282 VIGDNVSILHNVTLGGTGKM---SGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARL  356 (388)
Q Consensus       282 ~IGdnV~Ig~gvtIgg~~~i---~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArv  356 (388)
                      +||++|.|+++++|......   ....+++||++|+||++++|. +++||++|+||++++|.+++  .++ .++|..+.+
T Consensus        56 ~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~-~~~Ig~~~~Ig~~~~I~~~~~Ig~~-~~Ig~~s~V  133 (187)
T 3r3r_A           56 AIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLH-GCTIGNRVLVGMGSIVLDGAIIEDD-VMIGAGSLV  133 (187)
T ss_dssp             EECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEE-SCEECSSEEECTTCEECTTCEECSS-EEECTTCEE
T ss_pred             EECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEe-CcEECCCCEECCCCEECCCCEECCC-CEECCCCEE
Confidence            55666666666666321110   012468999999999999986 59999999999999999875  554 566777777


Q ss_pred             e--ccCCCCccccCCCCccccc
Q 047635          357 I--GGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       357 i--~~~~~~~~~~~~p~~~~~~  376 (388)
                      .  ..........+.|++.++.
T Consensus       134 ~~~~~i~~~~vv~G~pa~~i~~  155 (187)
T 3r3r_A          134 PQHKRLESGYLYLGSPVKQIRP  155 (187)
T ss_dssp             CTTCEECTTEEEETTTTEEEEE
T ss_pred             CCCcCcCCCcEEEecCCeEcCc
Confidence            7  4555555557889876554

>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}

Probab=99.32  E-value=6.9e-12  Score=113.58  Aligned_cols=118  Identities=16%  Similarity=0.172  Sum_probs=77.8

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEE---------cCCCEECCCCccCCCC---CCEECCCcEEccCCEEC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSI---------LHNVTLGGTGKMSGDR---HPKIGNGVLVGAGTCIL  322 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~I---------g~gvtIgg~~~i~g~~---~~~IGd~V~IGaga~Il  322 (388)
                      +.||+++.|++++.|..  ++.||+++.|+++|.|         |++|.|+.+..+....   +++||++|+||+++.|.
T Consensus        34 ~~ig~~~~I~~~~~i~~--~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~  111 (191)
T 3ixc_A           34 PSVDSTAFIAGNARIIG--DVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILH  111 (191)
T ss_dssp             CEECTTSEECTTCEEEE--EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEEC
T ss_pred             CEECCCCEECCCCEEeC--CcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEE
Confidence            44555555555555544  4555555555555443         5555555555554322   68999999999999876


Q ss_pred             CCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEe--ccCCCCccccCCCCccccc
Q 047635          323 GNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLI--GGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       323 g~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi--~~~~~~~~~~~~p~~~~~~  376 (388)
                       +++||++|+||++++|.+++  ++++ ++|..+.+.  ..........+.|++.++.
T Consensus       112 -~~~Ig~~~~Ig~~~~I~~~~~Ig~~~-~Ig~gsvV~~~~~i~~~~~v~G~pa~~i~~  167 (191)
T 3ixc_A          112 -ACTLGNNAFVGMGSIVMDRAVMEEGS-MLAAGSLLTRGKIVKSGELWAGRPAKFLRM  167 (191)
T ss_dssp             -SCEECTTCEECTTCEECTTCEECTTC-EECTTCEECTTCEECTTEEEEETTEEEEEE
T ss_pred             -CCEECCCCEECCCCEEeCCeEECCCC-EECCCCEECCCcCcCCCeEEECcCceeccc
Confidence             59999999999999999874  6665 456566666  3344444446788766543

>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A

Probab=99.32  E-value=8e-12  Score=118.19  Aligned_cols=68  Identities=13%  Similarity=0.161  Sum_probs=53.7

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC--CCCCcEEEecCcEEeccCCCCccccCCCCccc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGGKENPFMLDKIPSFTM  374 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~~~~~~~~~~~p~~~~  374 (388)
                      +++||++++|+.++.+.++++||++|+||++++|.++  |++++++.+ .+.+.+..+......+.|++..
T Consensus       126 ~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~I~~~v~Ig~~~~ig~-~s~V~~~v~~~~~~~G~pa~~~  195 (262)
T 2qia_A          126 DCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGG-CSGVAQDVPPYVIAQGNHATPF  195 (262)
T ss_dssp             TCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECS-SCEECSBBCTTEEEEEBTEEEE
T ss_pred             CCEECCCeEECCcccccCCcEECCCcEEccCCEECCCCEECCCCEEcc-CCEECCcCCCCeEEeccCceEe
Confidence            5677777778888888888999999999999999998  478876655 4888777666665678888654

>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A

Probab=99.32  E-value=5.2e-12  Score=115.54  Aligned_cols=107  Identities=18%  Similarity=0.226  Sum_probs=79.9

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE---------------
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI---------------  321 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I---------------  321 (388)
                      +++++.|..++.++.+.++.||+++.|+.+|+|+++.            .++||++|.||++|+|               
T Consensus        57 ~g~~~~i~~~~~~~~g~~~~IG~~~~I~~~~~i~~~~------------~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~  124 (199)
T 3ftt_A           57 TTDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGG------------QITIGDNVFIGPNCGFYTATHPLNFHHRNEG  124 (199)
T ss_dssp             CCSSEEECSSEEESSSTTEEECSSEEECTTEEEECSS------------CEEECSSEEECTTCEEECEECCSSHHHHHTT
T ss_pred             cCCCeEEeCCEEEEecCCcEECCCeEECCCeEEecCC------------EEEECCCCEECCCCEEecCCCcCcccccccc
Confidence            6677777777776554455555555555555554332            4588888888888888               


Q ss_pred             ---CCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          322 ---LGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       322 ---lg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                         .++++||++|+||++++|..++  .++ .++|..+.+.+..+.+....+.|++.++.
T Consensus       125 ~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~-~vIgagsvV~~dvp~~~v~~G~Pak~i~~  183 (199)
T 3ftt_A          125 FEKAGPIHIGSNTWFGGHVAVLPGVTIGEG-SVIGAGSVVTKDIPPHSLAVGNPCKVVRK  183 (199)
T ss_dssp             EEEECCEEECSSEEECTTCEECTTCEECTT-CEECTTCEECSCBCTTEEEETTTTEEEEE
T ss_pred             ceecCCeEEcCCcEEcCCCEECCCCEECCC-CEECCCCEECcccCCCCEEEEECCEEEee
Confidence               7889999999999999999986  555 56678888988888777778999977655

>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}

Probab=99.31  E-value=1.8e-12  Score=130.12  Aligned_cols=73  Identities=19%  Similarity=0.316  Sum_probs=53.4

Q ss_pred             EECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEe
Q 047635          276 VVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG  351 (388)
Q Consensus       276 vIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG  351 (388)
                      +||++++||++|.|+++++|++.........++||++|+||+||+  .+++||++|+||+|++|.+|++.+.. .|
T Consensus       260 ~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv--~GV~IGdgavIGAGsVVt~dv~i~~~-~G  332 (387)
T 2rij_A          260 RISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKACLLGANSV--TGIPLGDNCIVDAGIAVLEGTKFLLK-DA  332 (387)
T ss_dssp             EECTTCEECTTCEECTTCEECCBCSSTTCCBCEECTTCEECTTCE--ECSCBCTTCEECTTCEECTTCEEEEC-CH
T ss_pred             EECCCCEECCCCEECCCceEcceecCCCccCeEEeCCCEECCCCc--CCcEECCCCEECCCCEECCCceeeec-CC
Confidence            345555555666666655554321111123489999999999999  89999999999999999999988776 66

>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*

Probab=99.30  E-value=1.1e-11  Score=112.30  Aligned_cols=108  Identities=17%  Similarity=0.251  Sum_probs=81.7

Q ss_pred             EecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE--------------
Q 047635          256 DIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI--------------  321 (388)
Q Consensus       256 ~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I--------------  321 (388)
                      .+++++.|..++.++.+.++.||+++.|+.+|+|.+.+            .++||++|.||++++|              
T Consensus        58 ~ig~~~~I~~~~~~~~g~~~~IG~~~~i~~~~~i~~~~------------~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~  125 (188)
T 3srt_A           58 SVGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVC------------KIEIGDNVMLAPNVQIYTAYHPIDAQLRNS  125 (188)
T ss_dssp             BCCSCEEECSCEEESSSTTEEECTTEEECTTEEEECSS------------CEEECSSCEECTTCEEECEECCSSHHHHHT
T ss_pred             hcCCCCEEcCCEEEEeCCCeEECCcccccCceEEecCC------------ceEECCeeEECCCcEEeeCCccCchhhccc
Confidence            37777888887777655455666555555555554332            4588999999999988              


Q ss_pred             ----CCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          322 ----LGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       322 ----lg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                          .++++||++|+||++++|..++  .++ .++|..+.+.+.........+.|++.+++
T Consensus       126 ~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~-~vIgagsvV~~dvp~~~v~~G~Pa~vi~~  185 (188)
T 3srt_A          126 GIEYGSPVKIGDNVWIGGGVIITPGITIGDN-VVIGAGSVVTKDIPPNTVAVGNPCRVIKK  185 (188)
T ss_dssp             TEEEECCEEECSSCEECTTCEECTTCEECSS-EEECTTCEECSCBCSSEEEETTTTEEEEE
T ss_pred             cceECCCcEECCCcEEcCCCEECCCcEECCC-CEECCCCEECcccCCCCEEEccCCEEecc
Confidence                5799999999999999999886  444 67788888888877777778999987665

>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*

Probab=99.30  E-value=6.2e-12  Score=126.75  Aligned_cols=69  Identities=17%  Similarity=0.221  Sum_probs=58.7

Q ss_pred             CEECCCcEEccCCEECC-------CcEECCCCEECCCCEECCC--CCCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          307 PKIGNGVLVGAGTCILG-------NIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg-------~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      ++||++|+||+|++|..       +++||++|+||++++|.++  |++++++ |..+.+.+..+.+....+.|++.++.
T Consensus       370 ~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~i-g~~s~v~~~v~~~~~~~G~pa~~~~~  447 (456)
T 2v0h_A          370 SEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATI-GAGTTITRDVGENELVITRVAQRHIQ  447 (456)
T ss_dssp             EEECTTCEECTTCEEEECSSSSCCCEEECSSCEECTTCEEEESEEECTTCEE-CTTCEECSCBCTTCEECCCCCCCCCT
T ss_pred             cEECCCcEECCceEEeccccccCCCcEECCCCEECCCCEEcCCcEECCCCEE-CCCCEECCCcCCCCEEEccCceehhh
Confidence            58999999999999976       8999999999999999998  5888766 55688888877777778999988754

>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*

Probab=99.29  E-value=3.1e-11  Score=114.42  Aligned_cols=51  Identities=24%  Similarity=0.154  Sum_probs=40.7

Q ss_pred             CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcccc
Q 047635          324 NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMD  375 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~  375 (388)
                      +++||++|+||++++|.+++  .++++ +|..+.+.+..+......+.|++.++
T Consensus       170 ~v~Ig~~~~IG~~~~I~~g~~IG~~~~-IgagsvV~~dvp~~~~~~G~PA~~i~  222 (273)
T 3fs8_A          170 GVTIELFAVIAARSVVLPGIHINEDAL-VGAGAVVTKDVPKETVVVGNPAREIC  222 (273)
T ss_dssp             CCEECTTCEECTTCEECTTCEECTTCE-ECTTCEECSCBCTTEEEEETTEEEEE
T ss_pred             CcEECCCeEEcCCCEEcCCCEECCCCE-ECCCCEECccCCCCcEEEecCcEEec
Confidence            58999999999999999885  67664 46678888877777766789986654

>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*

Probab=99.29  E-value=1.9e-11  Score=110.72  Aligned_cols=107  Identities=18%  Similarity=0.252  Sum_probs=76.3

Q ss_pred             ecC-CcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE--------------
Q 047635          257 IHP-GAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI--------------  321 (388)
Q Consensus       257 Ig~-~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I--------------  321 (388)
                      +++ ++.|.+++.++.+.++.||+      +|.|+.+|+|++.      ..++||++|.||+++.|              
T Consensus        60 ~~~~~~~I~~~~~~~~g~~v~IG~------~~~I~~~~~i~~~------~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~  127 (190)
T 3hjj_A           60 SADGKAQINPDFRCDYGYNIHVGK------SFFANFNCVILDV------CEVRIGDHCMFAPGVHIYTATHPLHPVERNS  127 (190)
T ss_dssp             ESSSCCEECSSCEESSSTTEEECT------TCEECTTCEEECS------SCEEECTTCEECTTCEEECEECCSSHHHHTS
T ss_pred             cCCCCcEECCCEEEEeCCceEECC------ceeeCCCeEEEeC------CCeEECCceEEcCCcEEecCCccCchhhccc
Confidence            555 66666666664443445544      4555555554421      14578888888888888              


Q ss_pred             ----CCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          322 ----LGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       322 ----lg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                          .++++||++|+||++++|..++  .++ .++|..+.+.+.........+.|++.++.
T Consensus       128 ~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~-~vIgagsvV~~dvp~~~v~~G~Pa~~i~~  187 (190)
T 3hjj_A          128 GKEYGKPVKIGNNVWVGGGAIINPGVSIGDN-AVIASGAVVTKDVPNNVVVGGNPAKVIKT  187 (190)
T ss_dssp             SEEEECCEEECTTCEECTTCEECTTCEECTT-CEECTTCEECSCBCTTEEEETTTTEEEEE
T ss_pred             cccccCCeEECCCCEECCCCEECCCCEECCC-CEECCCCEECcccCCCCEEEccCCEEecc
Confidence                6789999999999999999885  555 46778888888877777778999987754

>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*

Probab=99.27  E-value=2.4e-11  Score=110.72  Aligned_cols=108  Identities=22%  Similarity=0.238  Sum_probs=76.0

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE---------------
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI---------------  321 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I---------------  321 (388)
                      +++++.|...+.+      .+|.++.||++|.|+++|+|++.      ..++||++|.||++++|               
T Consensus        59 ig~~~~I~~p~~~------~ig~~v~IG~~~~I~~~~~i~~~------~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~  126 (195)
T 3nz2_A           59 LGHKSCVQPPFHC------EFGKTIRIGDHTFINMNVVMLDG------APITIGDHVLIGPSTQFYTASHSLDYRRRQAW  126 (195)
T ss_dssp             ECTTCEECSSEEE------SCSTTEEECTTCEECTTEEEECS------SCEEECTTCEECTTCEEECEECCSSGGGTTTC
T ss_pred             cCCCcEEcCCeEE------EeCCCeEECCCcEECcCCEEecC------ceEEECCCCEECCCCEEecCCCCccccccccc
Confidence            6666666665544      44555555555555555555431      13578888888888865               


Q ss_pred             ---CCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcccccc
Q 047635          322 ---LGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHT  377 (388)
Q Consensus       322 ---lg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~~  377 (388)
                         .++++||++|+||+|++|.+++  .++ .++|..+.+.+....+....+.|++.++..
T Consensus       127 ~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~-~vIgagsvV~~dvp~~~v~~G~Pa~~i~~~  186 (195)
T 3nz2_A          127 ETICKPIVIEDDVWIGGNVVINQGVTIGAR-SVVAANSVVNQDVPPDTLVGGTPARILRSL  186 (195)
T ss_dssp             CCEECCEEECTTCEECTTCEECTTCEECTT-CEECTTCEECSCBCSSEEEETTTTEEEEEC
T ss_pred             ceecCCeEECCCCEEcCCCEECCCCEECCC-CEECCCCEEccccCCCcEEEccCCEEeccc
Confidence               4578999999999999999986  454 566778888888877777789999776553

>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}

Probab=99.27  E-value=3.1e-12  Score=132.55  Aligned_cols=94  Identities=18%  Similarity=0.316  Sum_probs=76.9

Q ss_pred             eeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEE-----cCCCEECCCCccCCCCCCEECCCcEEccCCEECCC---
Q 047635          253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSI-----LHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGN---  324 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~I-----g~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~---  324 (388)
                      .++.||+++.|+.++.| .  .++||+++.|+++|+|     |.+|.|+.+..+.   .++||++|+||++|+|.++   
T Consensus       290 g~v~IG~~~~I~~~a~I-~--~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~---gv~IGd~v~IG~~a~I~~~~~~  363 (496)
T 3c8v_A          290 GDTVIGENVLVSQRAYL-D--NAWMGKGSNAQENCYIINSRLERNCVTAHGGKII---NAHLGDMIFTGFNSFLQGSESS  363 (496)
T ss_dssp             SSCEECTTCEECTTCEE-E--EEEECTTCEECTTCEEEEEEEEESCEECTTCEEE---SEEEEETCEECTTCEEECCSSS
T ss_pred             CCeEECCCCEECCCcEE-e--ceEecCCCEECCCceEeceEeCCCCEECCCcEEc---CceECCCcEECCCCEEeCCCCc
Confidence            45667777777777777 2  6777888777777654     6666676655554   3899999999999999999   


Q ss_pred             -cEECCCCEECCCCEEC----CCCCCCcEEEec
Q 047635          325 -IKIGDGAKIGAGSVVL----KDVPPRTTAVGN  352 (388)
Q Consensus       325 -V~IGd~v~IGagsVV~----~dVp~~s~VvG~  352 (388)
                       ++||++|+||+||+|.    .+||+++++.|+
T Consensus       364 ~v~IG~~a~IGagsvV~~~~~~~I~~~s~v~G~  396 (496)
T 3c8v_A          364 PLKIGDGCVVMPHTIIDLEEPLEIPAGHLVWGY  396 (496)
T ss_dssp             CEEECTTCEECTTCEEECSSCEEECSSEEECSE
T ss_pred             ceEECCCCEECCCCEEecCCCcEeCCCCEEEEE
Confidence             9999999999999999    779999999987

>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}

Probab=99.26  E-value=3.2e-11  Score=117.72  Aligned_cols=95  Identities=23%  Similarity=0.221  Sum_probs=71.1

Q ss_pred             eeeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECC-------
Q 047635          251 EVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILG-------  323 (388)
Q Consensus       251 ~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg-------  323 (388)
                      ...++.|++++.||+++.|.+  + +|+.++.||++|.|.++++||.        ++.||++|.|++++.|.+       
T Consensus       132 I~p~a~I~~~v~Ig~g~~I~~--~-~I~~~~~IG~~~~I~~~~~Ig~--------~~~IG~~v~I~~~~~i~~~~~~~~~  200 (304)
T 3eg4_A          132 AVPNCIVRHSAYIAPNAILMP--S-FVNLGAYVDKGAMIDTWATVGS--------CAQIGKNVHLSGGVGIGGVLEPMQA  200 (304)
T ss_dssp             ECTTCEEBTTCEECTTCEECS--E-EECTTCEECTTCEECTTEEECT--------TCEECTTCEECTTCEECCCCSSTTC
T ss_pred             EcCCEEECCCcEECCCCEEeC--C-EECCCCEECCCcEEcCCcEECC--------CCccCCCcEECCCCEECCccccCcc
Confidence            334455666666666666665  4 6777888888888888888876        689999999999999987       


Q ss_pred             -CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEe
Q 047635          324 -NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLI  357 (388)
Q Consensus       324 -~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi  357 (388)
                       +++||++|+||++++|.+++  .+++ ++|..+.+.
T Consensus       201 ~~v~IGd~v~IG~~a~I~~gv~IG~~a-vIgagsvV~  236 (304)
T 3eg4_A          201 GPTIIEDNCFIGARSEVVEGCIVREGS-VLGMGVFIG  236 (304)
T ss_dssp             CCCEECTTCEECTTCEECTTCEECTTC-EECTTCEEC
T ss_pred             CCeEEcCCCEECCCCEEcCCcEECCCc-EECCCCEEc
Confidence             79999999999999998875  4443 445555544

>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A

Probab=99.24  E-value=5.1e-11  Score=114.62  Aligned_cols=94  Identities=22%  Similarity=0.253  Sum_probs=70.1

Q ss_pred             eeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECC--------C
Q 047635          253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILG--------N  324 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg--------~  324 (388)
                      .++.|++++.||+++.|.+  + +|+.++.||++|.|+++++|+.        +++||++|.|++++.|.+        +
T Consensus       109 p~a~I~~~~~Ig~g~~I~~--~-~i~~~~~IG~~~~I~~~~~Ig~--------~~~IG~~v~I~~~~~i~g~~~~~~~~~  177 (276)
T 3gos_A          109 PPATVRKGAFIARNTVLMP--S-YVNIGAFVDEGTMVDTWATVGS--------CAQIGKNVHLSGGVGIGGVLEPLQANP  177 (276)
T ss_dssp             TTCEEBTTCEECTTCEECS--E-EECTTCEECTTCEECTTEEECT--------TCEECTTCEECTTCEECCCCSSTTSCC
T ss_pred             CCcEECCCCEECCCCEEcC--C-EEcCCeEECCCCEECCCCEECC--------CCEECCCCEECCCCEECCccccCCCCC
Confidence            3445555555555555554  3 6777888888888888888875        689999999999999976        8


Q ss_pred             cEECCCCEECCCCEECCCC--CCCcEEEecCcEEec
Q 047635          325 IKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIG  358 (388)
Q Consensus       325 V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~  358 (388)
                      ++||++|+||++++|.+++  .+++ ++|.-+.+.+
T Consensus       178 v~IGd~v~IG~~a~I~~gv~IG~~a-vIgagsvV~~  212 (276)
T 3gos_A          178 TIIEDNCFVGARSEVVEGVIVEEGS-VISMGVFIGQ  212 (276)
T ss_dssp             CEECTTCEECTTCEECTTCEECTTC-EECTTCEECT
T ss_pred             eEECCCCEECCCCEECCCCEECCCC-EECCCCEECC
Confidence            9999999999999999875  4444 4455555543

>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3

Probab=99.24  E-value=4.1e-11  Score=108.42  Aligned_cols=105  Identities=18%  Similarity=0.242  Sum_probs=75.6

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE---------------
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI---------------  321 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I---------------  321 (388)
                      +| ++.|.+.+.++.      |.++.||++|.|+++++|.+.      ..++||++|.||++++|               
T Consensus        56 ~g-~~~I~~~~~~~~------g~~v~IG~~~~I~~~~~i~~~------~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~  122 (182)
T 1ocx_A           56 VT-EAYIEPTFRCDY------GYNIFLGNNFFANFDCVMLDV------CPIRIGDNCMLAPGVHIYTATHPIDPVARNSG  122 (182)
T ss_dssp             CS-SEEECSCEEESS------STTEEECSSEEECSSEEEECS------SCEEECTTCEECTTCEEECEECCSSHHHHTTT
T ss_pred             cC-CEEEeCCEEEEe------CCCEEECCCcEEeCCeEEEec------cceEEcCCcEEeCCcEEEeCCCccChhhcccC
Confidence            44 555655555443      344455555555555555321      25789999999999998               


Q ss_pred             ---CCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcccc
Q 047635          322 ---LGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMD  375 (388)
Q Consensus       322 ---lg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~  375 (388)
                         .++++||++|+||++++|..++  .+++ ++|..+.+.+.........+.|++.++
T Consensus       123 ~~~~~~v~IG~~v~Ig~~a~I~~gv~IG~~~-vIgagsvV~~dip~~~vv~G~Pa~~i~  180 (182)
T 1ocx_A          123 AELGKPVTIGNNVWIGGRAVINPGVTIGDNV-VVASGAVVTKDVPDNVVVGGNPARIIK  180 (182)
T ss_dssp             CBEECCEEECTTCEECTTCEECTTCEECTTC-EECTTCEECSCBCSSEEEETTTTEEEE
T ss_pred             ccccCCeEEeCCeEECCCCEECCCcEECCCC-EECCCCEECCcCCCCcEEEccccEEec
Confidence               4689999999999999999885  6665 558889998887777777899987664

>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*

Probab=99.24  E-value=4.8e-11  Score=110.07  Aligned_cols=108  Identities=19%  Similarity=0.259  Sum_probs=76.8

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEEC--------------
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCIL--------------  322 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Il--------------  322 (388)
                      +|+++.|...+.++-      |.++.||++|.|+.+|+|.+.      ..++||++|.||++++|.              
T Consensus        58 ig~~~~I~~~~~~~~------g~~i~IG~~~~I~~~~~i~~~------~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~  125 (203)
T 1krr_A           58 VGENAWVEPPVYFSY------GSNIHIGRNFYANFNLTIVDD------YTVTIGDNVLIAPNVTLSVTGHPVHHELRKNG  125 (203)
T ss_dssp             CCSSCEECSCEEESC------STTEEECSSCEECSCEEEECS------SCEEECSSCEECSSCEEESEECCSSTTTCTTC
T ss_pred             cCCCcEEcCCeEEEe------CCCeEECCeeEECCccEEecc------cceEECCCCEECCCCEEecCCcccchhhcccC
Confidence            666666666665543      444555555555555555431      246888888888888763              


Q ss_pred             ----CCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcccccc
Q 047635          323 ----GNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHT  377 (388)
Q Consensus       323 ----g~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~~  377 (388)
                          ++++||++|+||++++|..++  .++ .++|..+.+.+..+.+....+.|++.++..
T Consensus       126 ~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~-~vIgagsvV~~dvp~~~vv~G~PArvik~~  185 (203)
T 1krr_A          126 EMYSFPITIGNNVWIGSHVVINPGVTIGDN-SVIGAGSIVTKDIPPNVVAAGVPCRVIREI  185 (203)
T ss_dssp             CBEECCEEECTTCEECTTCEECTTCEECTT-CEECTTCEECSCBCTTEEEETTTTEEEEEC
T ss_pred             ceeCCCcEECCCeEECCCCEEeCCeEECCC-CEECCCCEECCCcCCCcEEEccCcEEeccC
Confidence                579999999999999999885  555 466778888888777777789999776553

>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}

Probab=99.23  E-value=5.5e-11  Score=116.69  Aligned_cols=98  Identities=21%  Similarity=0.233  Sum_probs=75.2

Q ss_pred             cceeeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECC-----
Q 047635          249 VSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILG-----  323 (388)
Q Consensus       249 ~~~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg-----  323 (388)
                      .....++.|++++.||+++.|.+  + +|+.++.||++|.|.++++|++        ++.||++|.|++++.|.+     
T Consensus       146 ~~I~p~a~I~~~~~IG~g~~I~~--~-~I~~g~~IG~~~~I~~~~~Ig~--------~~~IG~~v~I~~~~~I~~~~~~~  214 (316)
T 3tk8_A          146 FRVVPPAIARRGSFIAKNVVLMP--S-YTNIGAYVDEGTMVDTWATVGS--------CAQIGKNVHLSGGVGIGGVLEPL  214 (316)
T ss_dssp             CEECTTCEEBTTCEECTTCEECS--E-EECTTCEECTTCEECTTEEECT--------TCEECTTCEECTTCEECCCCSST
T ss_pred             cEEeCCeEEeCCcEEcCCCEECC--C-EEeCCCEECCCCEEccceEECC--------CCEECCCCEEcCCCEECCCcccc
Confidence            34445566777777777777776  3 7778888888888888888876        688999999999999988     


Q ss_pred             ---CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEec
Q 047635          324 ---NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIG  358 (388)
Q Consensus       324 ---~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~  358 (388)
                         +++||++|+||++++|.+++  .+++ ++|..+.+.+
T Consensus       215 ~~~~v~IGd~v~IG~~a~I~~gv~IG~g~-vIgagsvV~~  253 (316)
T 3tk8_A          215 QANPVIIEDNCFIGARSEVVEGVIVEENS-VISMGVYLGQ  253 (316)
T ss_dssp             TSCCCEECTTCEECTTCEECTTCEECTTC-EECTTCEECT
T ss_pred             cCCCcEECCCCEECCCCEEcCCCEECCCC-EEcCCCEEcC
Confidence               89999999999999998875  4443 3455555443

>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*

Probab=99.23  E-value=4.7e-11  Score=120.96  Aligned_cols=69  Identities=20%  Similarity=0.250  Sum_probs=56.7

Q ss_pred             CEECCCcEEccCCEECC-------CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          307 PKIGNGVLVGAGTCILG-------NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg-------~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      +.||++|.||+++++..       +++||++|+||++++|..++  .++++ +|..+.+.+....+....+.|+...+.
T Consensus       378 ~~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~-i~~~s~v~~~v~~~~~~~G~pa~~~~~  455 (468)
T 1hm9_A          378 CEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGDNSL-VGAGSTITKDVPADAIAIGRGRQINKD  455 (468)
T ss_dssp             EEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSCEECTTCE-ECTTCEECSCBCTTCEECCSCCCCCCT
T ss_pred             ccccCCcEECCCcEEecCcCccCCCcEECCCeEECCCCEEeCCcEECCCCE-ECCCCEECCCCCCCCEEEcCcceeehh
Confidence            46888889999988865       79999999999999999984  77776 566788888777777678999877653

>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A

Probab=99.22  E-value=1.1e-11  Score=113.75  Aligned_cols=51  Identities=27%  Similarity=0.231  Sum_probs=39.9

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEE
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARL  356 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArv  356 (388)
                      .++||++|+||.+++|.++++||++|+||++++|.+.+-....++|..+.+
T Consensus       111 ~~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V  161 (213)
T 3kwd_A          111 SVWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFNARVGAGCVVMMHVLI  161 (213)
T ss_dssp             SEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEE
T ss_pred             ceEECCCcEECCCcEEcCCCEECCCCEECCCCEEeCcEECCCCEEcCCCEE
Confidence            389999999999999999999999999999999875322222344555555

>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*

Probab=99.22  E-value=3.1e-11  Score=119.97  Aligned_cols=54  Identities=24%  Similarity=0.186  Sum_probs=44.7

Q ss_pred             CCEECCCcEEccCCEEC------------------------CCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEecc
Q 047635          306 HPKIGNGVLVGAGTCIL------------------------GNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGG  359 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Il------------------------g~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~  359 (388)
                      +++||++|+||++++|.                        ++++||++|+||+|++|.+++  ++++++ |..+.+.+.
T Consensus       314 ~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~gv~Ig~~~vi-~~gsvv~~~  392 (401)
T 2ggo_A          314 DSVIAEDVNFGAGTLIANLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILPGVKIGAYARI-YPGAVVNRD  392 (401)
T ss_dssp             SCEECTTCEECTTCEECCSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEECTTCEECTTCEE-CTTCEECSC
T ss_pred             ceEECCCcEECCCcEEcCcccCCCceeEEECCceEEecccccCcEECCCeEECCCcEEcCCcEECCCcEE-CCCCeEccc
Confidence            46899999999999997                        589999999999999999885  777655 556776654


Q ss_pred             C
Q 047635          360 K  360 (388)
Q Consensus       360 ~  360 (388)
                      .
T Consensus       393 v  393 (401)
T 2ggo_A          393 V  393 (401)
T ss_dssp             B
T ss_pred             c
Confidence            3

>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}

Probab=99.22  E-value=6.4e-11  Score=115.03  Aligned_cols=70  Identities=16%  Similarity=0.154  Sum_probs=57.1

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC--CCCCcEEEecCcEEeccCCCCccccCCCCcccc
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD--VPPRTTAVGNPARLIGGKENPFMLDKIPSFTMD  375 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~  375 (388)
                      .+++||++|+|+.++.+.++++||++|+||++++|.++  |.+++++ |..+.+.+..+......+.|++...
T Consensus       149 ~~~~IG~~~~i~~~~~i~g~v~Igd~~~Ig~~~~V~~~v~IG~~a~i-g~gs~V~~dvp~~~~~~G~Pa~~~~  220 (305)
T 3t57_A          149 HDCKIGDRNIFANNTLLAGHVVVEDNTHTAGASVVHQFCHIGSFAFI-GGGSVVSQDVPKYMMVAGERAELRG  220 (305)
T ss_dssp             TTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEE-CTTCEECSBBCTTEEEETTBTEEEE
T ss_pred             CceEeCCceEECCCcccCCCCEECCceEEcCCCEEcCCeEECCCCEE-cCCCeEcccCCCCeEEecCCcEEec
Confidence            35788888899999999999999999999999999998  4777655 5568888877766666788986543

>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A

Probab=99.21  E-value=3e-11  Score=109.52  Aligned_cols=107  Identities=16%  Similarity=0.182  Sum_probs=76.7

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE---------------
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI---------------  321 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I---------------  321 (388)
                      ++.++.|...+..      .+|.++.||+++.|+.+++|.+.      ..++||++|.||++++|               
T Consensus        57 ~g~~~~I~~p~~~------~~g~~v~IG~~~~i~~~~~i~~~------~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~  124 (185)
T 2p2o_A           57 TGERLFIEPNFRC------DYGYNIHVGENFFMNFDGVILDV------CEVRIGDHCFIGPGVHIYTATHPLDPHERNSG  124 (185)
T ss_dssp             CCSCEEECSCEEE------SCSTTEEECTTEEECSSEEEECS------SCEEECTTCEECTTCEEECEECCSSHHHHHTC
T ss_pred             cCCCcEEeccEEE------EecCCEEECCeeEEcCCeEEEec------cceEECCCcEEeCCCEEEcCCCcCChhhcccC
Confidence            4445555544433      34555666666666666666421      25799999999999999               


Q ss_pred             ---CCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          322 ---LGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       322 ---lg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                         .++++||++|+||++++|..++  .++ .++|..+.+.+....+....+.|++.++.
T Consensus       125 ~~~~~~v~IGd~v~IG~~~~I~~gv~IG~~-~vIgagsvV~~~vp~~~vv~G~Pa~vi~~  183 (185)
T 2p2o_A          125 LEYGKPVVIGHNVWIGGRAVINPGVTIGDN-AVIASGAVVTKDVPANAVVGGNPAKVIKW  183 (185)
T ss_dssp             CBEECCEEECSSCEECTTCEECTTCEECTT-CEECTTCEECSCBCTTEEEEETTEEEEEE
T ss_pred             ccccCCeEEcCCeEECCCCEECCCCEECCC-CEECCCCEECCCCCCCcEEEcccCEEeee
Confidence               5689999999999999999885  555 46677788888777777767889876643

>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*

Probab=99.20  E-value=4.1e-11  Score=119.53  Aligned_cols=49  Identities=24%  Similarity=0.413  Sum_probs=33.3

Q ss_pred             CCEECCCcEEccCCEEC--------------------CCcEECCCCEECCCCEECCCCCCCcEEEecCcE
Q 047635          306 HPKIGNGVLVGAGTCIL--------------------GNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPAR  355 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Il--------------------g~V~IGd~v~IGagsVV~~dVp~~s~VvG~PAr  355 (388)
                      +++||++|.|+++++|.                    ++++||++|+||++++|.++...+ +++|..++
T Consensus       190 ~~~IG~~~~I~~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v~IG~~~~I~~~~~~~-t~ig~~~~  258 (374)
T 2iu8_A          190 RVSIGKRVIIQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTIDRGRFKH-SVVREGSK  258 (374)
T ss_dssp             SEEECTTCEECTTCEEEEECSCEEEETTTEEEECCCCCCEEECTTCEECTTCEEEECSSSC-EEECTTCE
T ss_pred             cceECCCCEECCCCEECcCCcccccccCCceeEeeeeccEEECCCCEECCCcEEccCcccc-eeECCCcE
Confidence            46778888888888774                    348888888888888887665433 34444443

>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*

Probab=99.18  E-value=1.2e-10  Score=117.33  Aligned_cols=67  Identities=21%  Similarity=0.278  Sum_probs=53.0

Q ss_pred             EECCCcEEccCCEECC-------CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcccc
Q 047635          308 KIGNGVLVGAGTCILG-------NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMD  375 (388)
Q Consensus       308 ~IGd~V~IGaga~Ilg-------~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~  375 (388)
                      .||++|+||+++++..       +++||++|+||++++|.+++  ++++ ++|..+.+.+..+......+.|+....
T Consensus       374 ~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~~gv~Ig~~~-~igagsvV~~~v~~~~~~~G~p~~~~~  449 (459)
T 4fce_A          374 EIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGA-TIGAGTTVTRDVAENELVISRVKQVHI  449 (459)
T ss_dssp             EECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSEEECTTC-EECTTCEECSCBCTTCEECCCCCCCCC
T ss_pred             EECCCCEECCCCEEeccccccCCCCEECCCeEEcCCCEEcCCcEECCCC-EECCCCEEccccCCCCEEEecccccch
Confidence            7777788888887765       79999999999999999885  6765 456778888887777777787875443

>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A

Probab=99.17  E-value=9.2e-11  Score=115.36  Aligned_cols=101  Identities=22%  Similarity=0.291  Sum_probs=75.0

Q ss_pred             eeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCC-------
Q 047635          252 VFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGN-------  324 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~-------  324 (388)
                      ..++.|++.+.|+.++.|+.  +++|+.++.|+.++.|+.+|.|.....+    .++||++|.||+||+|.++       
T Consensus       182 ~~gv~I~P~AvI~~GA~IGe--Gv~Igp~a~Vn~na~IGdg~iI~~~a~i----gv~IGdnv~IgpGa~IgG~~~~~~~~  255 (347)
T 3r5d_A          182 PAGVRIADTARVRLGAYIGE--GTTVMHEGFVNFNAGTEGPGMIEGRVSA----GVFVGKGSDLGGGCSTMGTLSGGGNI  255 (347)
T ss_dssp             CTTEEESSGGGBBTTEEECT--TEEECTTCEECTTEEESSSEEECSEECT----TCEECTTEEECTTCEECC------CC
T ss_pred             cCCcEECCcCEECCCCEECC--CCEECCCCEECCCCEECCCcEEcCCceE----eEEECCCCEECCCCEEccccCCCCcc
Confidence            34677777777777777776  7777777777777777777777654333    2899999999999999886       


Q ss_pred             -cEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          325 -IKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       325 -V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                       |+||++|+||+|++|.-.|.+++ ++|..+.+.+.
T Consensus       256 ~V~IGdnv~IGAnAtIGVtIGd~~-iIGAGSVVtkd  290 (347)
T 3r5d_A          256 VISVGEGCLIGANAGIGIPLGDRN-IVEAGLYITAG  290 (347)
T ss_dssp             CCEECTTCEECTTCEECSCBCTTC-EECTTCEECTT
T ss_pred             ceEECCCCEECCCCEEeeEECCCC-EECCCCEECCC
Confidence             99999999999999932345544 55666666543

>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A

Probab=99.15  E-value=7.2e-11  Score=104.96  Aligned_cols=116  Identities=20%  Similarity=0.169  Sum_probs=70.8

Q ss_pred             EecCCcEECCceEEcCCCCcEECCCcEECCCc---------EEcCCCEECCCCccCC--CCCCEECCCcEEccCCEECCC
Q 047635          256 DIHPGAKIGRGLLFDHATGVVVGETAVIGDNV---------SILHNVTLGGTGKMSG--DRHPKIGNGVLVGAGTCILGN  324 (388)
Q Consensus       256 ~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV---------~Ig~gvtIgg~~~i~g--~~~~~IGd~V~IGaga~Ilg~  324 (388)
                      .||+++.|++++.|..  +++||+++.|++++         .||.+|.|+.+..+..  ..+++||++|.||.+++|. +
T Consensus        14 ~ig~~~~I~~~~~i~~--~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~-~   90 (173)
T 1xhd_A           14 KIASSAFIADYVTITG--DVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILH-S   90 (173)
T ss_dssp             EECTTCEECTTCEEEE--EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEE-S
T ss_pred             EECCCcEECCCCEEEC--CEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEe-C
Confidence            3444444444444432  33444444433333         2344444444333332  1368999999999999985 6


Q ss_pred             cEECCCCEECCCCEECCCC--CCCcEEEecCcEEe--ccCCCCccccCCCCcccc
Q 047635          325 IKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLI--GGKENPFMLDKIPSFTMD  375 (388)
Q Consensus       325 V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi--~~~~~~~~~~~~p~~~~~  375 (388)
                      ++||++|+||++++|.+++  .+++ ++|.-+.+.  ..........+.|+..++
T Consensus        91 ~~Ig~~~~Ig~~~~i~~~~~Ig~~~-~Ig~~s~V~~~~~i~~~~vv~G~pa~~~~  144 (173)
T 1xhd_A           91 CHIKKDALIGMGSIILDGAEIGEGA-FIGAGSLVSQGKKIPPNTLAFGRPAKVIR  144 (173)
T ss_dssp             CEECTTCEECTTCEECTTCEECTTC-EECTTCEECTTCEECTTEEEEETTEEEEE
T ss_pred             CEECCCCEEcCCCEEcCCCEECCCC-EECCCCEECCCcEeCCCCEEECCCCEECC
Confidence            9999999999999999874  5655 456566666  234444444578876654

>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A

Probab=99.13  E-value=8e-11  Score=110.90  Aligned_cols=74  Identities=22%  Similarity=0.326  Sum_probs=49.9

Q ss_pred             EECCCcEEcCCCEECCCCccCC---------------CCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC-CCC
Q 047635          282 VIGDNVSILHNVTLGGTGKMSG---------------DRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD-VPP  345 (388)
Q Consensus       282 ~IGdnV~Ig~gvtIgg~~~i~g---------------~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d-Vp~  345 (388)
                      +||++|.|+++|+|........               ...++||++|+||++|+|.++++||++|+||++++|..- |.+
T Consensus       101 ~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~v~Ig~  180 (247)
T 1qre_A          101 FVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFKSKVGN  180 (247)
T ss_dssp             EECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEECT
T ss_pred             EECCCCEECCCeEEEecccccccCcccccceeeccCccCceEECCCCEECCCCEEcCCcEECCCCEECCCCEEeceEECC
Confidence            5666666666666643211100               024899999999999999988999999999999998762 233


Q ss_pred             CcEEEecCcEE
Q 047635          346 RTTAVGNPARL  356 (388)
Q Consensus       346 ~s~VvG~PArv  356 (388)
                      ++ ++|..+.+
T Consensus       181 ~~-~IgagsvV  190 (247)
T 1qre_A          181 NC-VLEPRSAA  190 (247)
T ss_dssp             TC-EECTTCEE
T ss_pred             CC-EECCCCEE
Confidence            33 34444444

>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}

Probab=99.13  E-value=8.2e-11  Score=111.12  Aligned_cols=122  Identities=14%  Similarity=0.138  Sum_probs=80.3

Q ss_pred             eeEecCCcEECCceEEcCC--CCcEECCCcEECC--------CcEEcCCCEECCCCccCCC-CCCEECCCcEEccCCEEC
Q 047635          254 SVDIHPGAKIGRGLLFDHA--TGVVVGETAVIGD--------NVSILHNVTLGGTGKMSGD-RHPKIGNGVLVGAGTCIL  322 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~g--tgVvIG~~~~IGd--------nV~Ig~gvtIgg~~~i~g~-~~~~IGd~V~IGaga~Il  322 (388)
                      ++.|++++.|+.++.+..+  ..+.||+++.|++        ++.||.+|.|+.+..+.++ ..++||++|.||++++|.
T Consensus        63 ~v~I~~~~~i~~~~~i~~g~~~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~  142 (252)
T 3jqy_B           63 KLIIEDDVECRWLTVIFRGDNNYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILR  142 (252)
T ss_dssp             EEEECTTCEEEEEEEEEESSSCEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEE
T ss_pred             EEEEcCCcEEecceEEEeCCCCeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEe
Confidence            4666666665555544221  1344555544443        3333444444443333321 258999999999999987


Q ss_pred             CC-------------------cEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          323 GN-------------------IKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       323 g~-------------------V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      ..                   ++||++|+||++++|.+++  .+++ ++|..+.+.+..+......+.|++.++.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~IG~~~-~IgagsvV~~~vp~~~~~~G~Pa~~i~~  216 (252)
T 3jqy_B          143 ASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSVGSGS-VIGYGSIVTKDVPSMCAAAGNPAKIIKR  216 (252)
T ss_dssp             CSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCEECTTC-EECTTCEECSCBCTTEEEEETTEEEEEE
T ss_pred             cCCCcccccccccccccccCCeEEecCcEECCCCEECCCCEECCCC-EECCCCEECcccCCCCEEEccCCEEEcc
Confidence            65                   8999999999999999885  5554 5666788877777666667889877665

>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*

Probab=99.12  E-value=2.2e-10  Score=105.44  Aligned_cols=122  Identities=20%  Similarity=0.268  Sum_probs=84.4

Q ss_pred             eeEecCCcEECCc-eEEcC-CCCcEECCCcEECCC---------cEEcCCCEECCCCccCC-CCCCEECCCcEEccCCEE
Q 047635          254 SVDIHPGAKIGRG-LLFDH-ATGVVVGETAVIGDN---------VSILHNVTLGGTGKMSG-DRHPKIGNGVLVGAGTCI  321 (388)
Q Consensus       254 gV~Ig~~a~IG~g-v~I~~-gtgVvIG~~~~IGdn---------V~Ig~gvtIgg~~~i~g-~~~~~IGd~V~IGaga~I  321 (388)
                      .+.|+++++|.+. +.|.. +..++||+++.|+++         +.||.+|.|+....+.. ...++||++|.||++++|
T Consensus        36 ~v~Ig~~~~I~~~~~~i~g~~~~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I  115 (215)
T 2wlg_A           36 SVYIGNNCKIVSSNIRLKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEI  115 (215)
T ss_dssp             EEEECTTCEEESCEEEEESSSCEEEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEE
T ss_pred             EEEECCCCEEeCceEEEEcCCCEEEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEE
Confidence            4667777777666 34432 123666666666554         44455555554222211 135799999999999999


Q ss_pred             CC-------------------CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCcccc-CCCCccccc
Q 047635          322 LG-------------------NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLD-KIPSFTMDH  376 (388)
Q Consensus       322 lg-------------------~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~-~~p~~~~~~  376 (388)
                      ..                   +++||++|+||++++|.+++  .++++ +|..+.+.+..+...... +.|++.++.
T Consensus       116 ~~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~gv~Ig~~~v-IgagsvV~~~vp~~~i~~aG~Pa~~i~~  191 (215)
T 2wlg_A          116 RNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPNNVV-VGSHTVLYKSFKEPNCVIAGSPAKIVKE  191 (215)
T ss_dssp             ESCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTTCEECSSCE-ECTTCEECSCCCCCSCEEETTTTEEEEC
T ss_pred             ECCCCcccccccccccccCCCCeEECCCcEECCCCEECCCCEECCCCE-ECCCCEEcCccCCCeEEEcccCCEEECC
Confidence            75                   37999999999999999985  66664 566688877766666667 999987765

>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*

Probab=99.10  E-value=3.4e-10  Score=110.64  Aligned_cols=101  Identities=23%  Similarity=0.293  Sum_probs=74.0

Q ss_pred             eeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCC-------
Q 047635          252 VFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGN-------  324 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~-------  324 (388)
                      ..++.|||.+.|+.++.|+.  +++||.+++|+.++.|+.+|.|.+....    .++||++|.|++|++|.++       
T Consensus       159 ~~gv~I~P~AvI~~gA~IGe--Gv~Igp~~fVniga~Ig~g~~In~~i~i----Gv~IGd~v~IgpGa~IgG~~~~~~~~  232 (332)
T 3fsy_A          159 PTGVRIADADRVRLGAHLAP--GTTVMHEGFVNYNAGTLGASMVEGRISA----GVVVGDGSDVGGGASIMGTLSGGGTH  232 (332)
T ss_dssp             CTTCEESCGGGBBTTEEECT--TCEECTTCEECTTEEESSCCEECSEECT----TCEECTTCEECTTCEECSBCC---CC
T ss_pred             CCCcEECCcCEECCCCEECC--CCEEccccEEEECCeECcCCEECCceec----ceEECCCCEECCCCEEcCCCCCCCcc
Confidence            34577788777777777776  7777777777777777777777543221    3899999999999999886       


Q ss_pred             -cEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          325 -IKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       325 -V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                       ++||++|+||+|++|.-.|.++ .++|..+.+.+.
T Consensus       233 ~V~IGDnv~IGanAtIgVtIGd~-~iIGAGSVVtkd  267 (332)
T 3fsy_A          233 VISIGKRCLLGANSGLGISLGDD-CVVEAGLYVTAG  267 (332)
T ss_dssp             BCEECTTCEECTTCEECSCBCSS-CEECTTCEECTT
T ss_pred             ceEECCCCEECCCCEEeeEECCC-CEECCCCEECCC
Confidence             9999999999999992123343 345555655543

>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A

Probab=99.10  E-value=1.8e-10  Score=102.44  Aligned_cols=89  Identities=19%  Similarity=0.276  Sum_probs=59.1

Q ss_pred             cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEec
Q 047635          281 AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIG  358 (388)
Q Consensus       281 ~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~  358 (388)
                      ++||++|.|+++|+|...    ...+++||++|.|+.++.|. +++||++|+||++++|.+++  .++ .++|.-+.+.+
T Consensus        50 ~~IG~~~~I~~~~~I~~~----~~~~~~Ig~~~~I~~~~~i~-~~~Ig~~~~Ig~~~~i~~~~~Ig~~-~~Ig~~s~V~~  123 (173)
T 1v3w_A           50 IYVGKYSNVQDNVSIHTS----HGYPTEIGEYVTIGHNAMVH-GAKVGNYVIIGISSVILDGAKIGDH-VIIGAGAVVPP  123 (173)
T ss_dssp             EEECTTCEECTTCEEECB----TTBCEEECSSCEECTTCEEE-SCEECSSEEECTTCEECTTCEECSS-EEECTTCEECT
T ss_pred             EEECCCCEECCCcEEEec----CCCCeEECCCCEECCCCEEC-CCEECCCCEECCCCEEeCCCEECCC-CEECCCCEECC
Confidence            344444444444444321    01258999999999999984 69999999999999999875  444 45676777763


Q ss_pred             --cCCCCccccCCCCcccc
Q 047635          359 --GKENPFMLDKIPSFTMD  375 (388)
Q Consensus       359 --~~~~~~~~~~~p~~~~~  375 (388)
                        .........+.|+..++
T Consensus       124 ~~~i~~~~~v~G~pa~~~~  142 (173)
T 1v3w_A          124 NKEIPDYSLVLGVPGKVVR  142 (173)
T ss_dssp             TCEECTTEEEEETTEEEEE
T ss_pred             CcEeCCCcEEECcCCEEec
Confidence              33444444477776543

>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A

Probab=99.08  E-value=1.5e-10  Score=107.37  Aligned_cols=82  Identities=20%  Similarity=0.280  Sum_probs=64.7

Q ss_pred             CcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE-----------------------------------CCCcEECCC
Q 047635          286 NVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI-----------------------------------LGNIKIGDG  330 (388)
Q Consensus       286 nV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I-----------------------------------lg~V~IGd~  330 (388)
                      +|.|++++.|++        +++||++|.||++++|                                   .++++||++
T Consensus        54 ~~vI~~~~~Ig~--------~v~IG~~~~Ig~~v~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~IG~~  125 (220)
T 4hur_A           54 DQVLYHYEVIGD--------KLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYMPSLKDLPLKGDIEIGND  125 (220)
T ss_dssp             GGEESCCTTTCC--------CEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGGGSCCCCCEEECSS
T ss_pred             CeEEeCCCEECC--------CeEECCCCEECCCCEEEECCCCcccCCcceeeeeecccccccccccccccccCCeEECCC
Confidence            555666665554        5788999999998885                                   578999999


Q ss_pred             CEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          331 AKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       331 v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      |+||+||+|..++  .+++ ++|.-+.+.+.........+.|++.++.
T Consensus       126 v~IG~~a~I~~gv~IG~ga-vIgagsvV~~dVp~~~vv~G~PAk~ir~  172 (220)
T 4hur_A          126 VWIGRDVTIMPGVKIGDGA-IIAAEAVVTKNVAPYSIVGGNPLKFIRK  172 (220)
T ss_dssp             CEECTTCEECTTCEECTTC-EECTTCEECSCBCTTEEEETTTTEEEEE
T ss_pred             cEECCCCEEeCCCEECCCC-EEcCCCEEcccCCCCcEEeCCCCEeehh
Confidence            9999999999886  5554 6677888888877777778999987763

>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}

Probab=99.08  E-value=5.4e-10  Score=101.18  Aligned_cols=114  Identities=19%  Similarity=0.174  Sum_probs=64.8

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEEC---------------CCcEEcCCCEECCCCcc--------CCCCCCEEC
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIG---------------DNVSILHNVTLGGTGKM--------SGDRHPKIG  310 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IG---------------dnV~Ig~gvtIgg~~~i--------~g~~~~~IG  310 (388)
                      .+.||++|.|++++.|..  +++||++++|+               +||.|+++++|+.....        .....++||
T Consensus        12 ~v~I~~~a~I~~~a~I~g--~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig   89 (194)
T 3tv0_A           12 SVKIAPGAVVCVESEIRG--DVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIG   89 (194)
T ss_dssp             CEEECTTCEECTTSEEES--SEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEEC
T ss_pred             CCEECCCCEEcCCCEEeC--CCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEEC
Confidence            355666666555555554  45555544444               44444444444321111        112347899


Q ss_pred             CCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEecc--CCCCccccCCCC
Q 047635          311 NGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGG--KENPFMLDKIPS  371 (388)
Q Consensus       311 d~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~--~~~~~~~~~~p~  371 (388)
                      ++++|+.++++. +++||++|+||++++|..++  .+++ ++|.-+.+.+.  .++.+...+.|+
T Consensus        90 ~~~~i~~~~~i~-~~~Ig~~~~Ig~~~~I~~gv~IG~~~-~IgagsvV~~~~~Ip~~svv~G~pa  152 (194)
T 3tv0_A           90 TNNVFEVGCYSQ-AMKMGDNNVIESKAYVGRNVILTSGC-IIGACCNLNTFEVIPENTVIYGADC  152 (194)
T ss_dssp             SSCEECTTCEEC-CSEECSSCEECTTCEECTTEEECSSC-EECTTCEECCCEEECTTEEEESTTC
T ss_pred             CcceEecceeEe-eeeecccceecceeeECCeEEECCCC-EECCCCEECCCcEECCCCEEECCCc
Confidence            999999998874 68888888888888888774  4433 44445555443  334444445555

>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A

Probab=98.90  E-value=4.2e-09  Score=104.03  Aligned_cols=53  Identities=23%  Similarity=0.241  Sum_probs=40.8

Q ss_pred             CEECCCcEEccCCEECCCcEECCCCEECCCCEECCC------CCCCcEEEecCcEEeccCC
Q 047635          307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD------VPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d------Vp~~s~VvG~PArvi~~~~  361 (388)
                      ..|+++|.|+++|+|. +.+|++++.|+++++|.++      |+++..+.|+ |++.+...
T Consensus       163 s~I~~g~~I~~~a~I~-~svI~~~a~I~~~a~V~~~~~~~v~I~~~~~I~g~-a~V~R~~~  221 (334)
T 2pig_A          163 SRIVHQVQLYGNATIT-HAFIEHRAEVFDFALIEGDKDNNVWICDCAKVYGH-ARVIAGTE  221 (334)
T ss_dssp             CEEETTCEECTTCEEE-SEEECTTCEECTTCEEECCSSCCEEECTTCEECTT-CEEECCSS
T ss_pred             cEEcCCCEEcCCeEEe-CcEEcCCCEECCCcEECCceeccEEECCCcEEeee-EEEeccCC
Confidence            4555556667777775 6778888888899999888      7899999998 99987543

>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}

Probab=98.89  E-value=1.6e-09  Score=112.19  Aligned_cols=84  Identities=14%  Similarity=0.203  Sum_probs=59.2

Q ss_pred             CcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEE
Q 047635          260 GAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV  339 (388)
Q Consensus       260 ~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV  339 (388)
                      ++.||+++.|+.  +++| .+++||++|.|+.+|+|.         +++||++|+||.+++|.+ ++||++|+||++|+|
T Consensus       291 ~v~IG~~~~I~~--~a~I-~~v~IG~~~~I~~~~~I~---------~~vIG~~~~Ig~~a~I~g-v~IGd~v~IG~~a~I  357 (496)
T 3c8v_A          291 DTVIGENVLVSQ--RAYL-DNAWMGKGSNAQENCYII---------NSRLERNCVTAHGGKIIN-AHLGDMIFTGFNSFL  357 (496)
T ss_dssp             SCEECTTCEECT--TCEE-EEEEECTTCEECTTCEEE---------EEEEEESCEECTTCEEES-EEEEETCEECTTCEE
T ss_pred             CeEECCCCEECC--CcEE-eceEecCCCEECCCceEe---------ceEeCCCCEECCCcEEcC-ceECCCcEECCCCEE
Confidence            344444444443  3344 334555555555555553         589999999999999875 999999999999999


Q ss_pred             CCC------CCCCcEEEecCcEEe
Q 047635          340 LKD------VPPRTTAVGNPARLI  357 (388)
Q Consensus       340 ~~d------Vp~~s~VvG~PArvi  357 (388)
                      .++      |++++++ |..+.+.
T Consensus       358 ~~~~~~~v~IG~~a~I-GagsvV~  380 (496)
T 3c8v_A          358 QGSESSPLKIGDGCVV-MPHTIID  380 (496)
T ss_dssp             ECCSSSCEEECTTCEE-CTTCEEE
T ss_pred             eCCCCcceEECCCCEE-CCCCEEe
Confidence            999      5777654 6667666

>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3

Probab=98.89  E-value=2.9e-09  Score=97.94  Aligned_cols=54  Identities=13%  Similarity=0.198  Sum_probs=43.2

Q ss_pred             CCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          322 LGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       322 lg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      .++++||++|+||++++|..++  .+++ ++|.-+.+.+..+......+.|++.++.
T Consensus       109 ~g~v~IG~~v~IG~~a~I~~gv~IG~~~-iIgagsvV~~dVp~~~vv~G~PAk~i~~  164 (212)
T 3eev_A          109 SGDTIIGHDVWIGTEAMIMPGVKIGHGA-IIASRSVVTKDVAPYEVVGSNPAKHIKF  164 (212)
T ss_dssp             CCCEEECSSCEECTTCEECTTCEECTTC-EECTTCEECSCBCTTEEEETTTTEEEEE
T ss_pred             CCCeEECCCCEECCCCEEcCCCEECCCC-EECCCCEEccccCCCcEEEecCCEEEec
Confidence            3578999999999999999886  5554 5677788888877777778999987664

>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}

Probab=98.85  E-value=3.5e-09  Score=106.31  Aligned_cols=70  Identities=16%  Similarity=0.213  Sum_probs=52.6

Q ss_pred             CcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEE
Q 047635          260 GAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV  339 (388)
Q Consensus       260 ~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV  339 (388)
                      ++.||++|.| +  +++|+ +++||++|.|+++|+|.         +++||++|+||+||+|.+ ++||++|.||+|++|
T Consensus       324 ~~~ig~~~~I-~--~~~i~-~~~ig~~~~I~~~~~i~---------~~~i~~~~~i~~~~~i~~-~~ig~~~~i~~~~~i  389 (420)
T 3brk_X          324 SSVVSGDCII-S--GAALN-RSLLFTGVRANSYSRLE---------NAVVLPSVKIGRHAQLSN-VVIDHGVVIPEGLIV  389 (420)
T ss_dssp             SCEECSSCEE-E--SCEEE-SCEECTTCEECTTCEEE---------EEEECTTCEECTTCEEEE-EEECTTCEECTTCEE
T ss_pred             CCEECCCCEE-c--CCEEe-CcEEcCCCEECCCCEEc---------ceEEcCCCEECCCCEEec-eEECCCCEECCCCEE
Confidence            4555555555 3  44443 36666666666666664         479999999999999985 999999999999999


Q ss_pred             CCCC
Q 047635          340 LKDV  343 (388)
Q Consensus       340 ~~dV  343 (388)
                      .++.
T Consensus       390 ~~~~  393 (420)
T 3brk_X          390 GEDP  393 (420)
T ss_dssp             SSCH
T ss_pred             eCCC
Confidence            9874

>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}

Probab=98.82  E-value=8.7e-09  Score=95.95  Aligned_cols=70  Identities=20%  Similarity=0.257  Sum_probs=54.7

Q ss_pred             CCEECCCcEEccCCEE-----------------------------------CCCcEECCCCEECCCCEECCCC--CCCcE
Q 047635          306 HPKIGNGVLVGAGTCI-----------------------------------LGNIKIGDGAKIGAGSVVLKDV--PPRTT  348 (388)
Q Consensus       306 ~~~IGd~V~IGaga~I-----------------------------------lg~V~IGd~v~IGagsVV~~dV--p~~s~  348 (388)
                      .++||++|.|++|++|                                   .++++||++|+||++++|..++  .+++ 
T Consensus        65 ~v~IG~~~~I~~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~Igd~v~IG~~a~I~~gv~IG~~~-  143 (219)
T 4e8l_A           65 KLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYMPSLKDLPLKGDIEIGNDVWIGRDVTIMPGVKIGDGA-  143 (219)
T ss_dssp             CEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTCGGGCCCTTTSCCCCCEEECSSCEECTTCEECTTCEECTTC-
T ss_pred             CEEECCCCEEcCCCEEEeCCCcceecCCCcceeEecCcccccccccccccccCCcEECCCeEECCCCEEcCCCEECCCC-
Confidence            5677777777777776                                   2469999999999999999885  6654 


Q ss_pred             EEecCcEEeccCCCCccccCCCCccccc
Q 047635          349 AVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       349 VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      ++|..+.+.+.........+.|++.++.
T Consensus       144 ~IgagsvV~~dv~~~~~~~G~Pa~~i~~  171 (219)
T 4e8l_A          144 IIAAEAVVTKNVAPYSIVGGNPLKFIRK  171 (219)
T ss_dssp             EECTTCEECSCBCTTEEEETTTTEEEEE
T ss_pred             EECCCCEEcccCCCCeEEEecCCEeecc
Confidence            5567788888877777778999977653

>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*

Probab=98.79  E-value=9.1e-09  Score=104.02  Aligned_cols=28  Identities=21%  Similarity=0.379  Sum_probs=15.1

Q ss_pred             cEEccCCEECCCcEECCCCEECCCCEECC
Q 047635          313 VLVGAGTCILGNIKIGDGAKIGAGSVVLK  341 (388)
Q Consensus       313 V~IGaga~Ilg~V~IGd~v~IGagsVV~~  341 (388)
                      +.||.|++| ++++||++|+||+|++|..
T Consensus       389 ~~Ig~~~~i-~~~~Ig~~~~IG~~~~i~~  416 (451)
T 1yp2_A          389 IGIGKNCHI-KRAIIDKNARIGDNVKIIN  416 (451)
T ss_dssp             SEECTTCEE-ESEEECTTCEECTTCEECC
T ss_pred             EEECCCCEE-eccEeCCCcEECCCCEEeC
Confidence            455555554 2455555555555555554

>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*

Probab=98.74  E-value=1.4e-08  Score=102.53  Aligned_cols=31  Identities=23%  Similarity=0.314  Sum_probs=16.5

Q ss_pred             CEECCCcEEccCCEECCC------cEECCCCEECCCC
Q 047635          307 PKIGNGVLVGAGTCILGN------IKIGDGAKIGAGS  337 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~------V~IGd~v~IGags  337 (388)
                      ++||++|+||+|++|.++      .+||++|+||+|+
T Consensus       400 ~~Ig~~~~IG~~~~i~~~~~~~~~~~ig~~~~ig~~~  436 (451)
T 1yp2_A          400 AIIDKNARIGDNVKIINKDNVQEAARETDGYFIKSGI  436 (451)
T ss_dssp             EEECTTCEECTTCEECCSSCCSCEEEGGGTEEEETTE
T ss_pred             cEeCCCcEECCCCEEeCCcccccCceeCCCEEEcCCE
Confidence            455666666666655543      2445555555554

>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*

Probab=98.73  E-value=3.9e-08  Score=101.19  Aligned_cols=68  Identities=13%  Similarity=0.226  Sum_probs=49.2

Q ss_pred             CCEECCCcEEccCCEECC-------CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCcc-ccCCCCccc
Q 047635          306 HPKIGNGVLVGAGTCILG-------NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFM-LDKIPSFTM  374 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg-------~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~-~~~~p~~~~  374 (388)
                      ++.||+||.||+|+++..       .++||++|+||.++.|...|  .+++ ++|..+.+.++.+.+.. +.+.|....
T Consensus       386 d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~~v~Ig~~~-~i~ags~v~~dvp~~~l~~~~~~~~~~  463 (501)
T 3st8_A          386 DADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAPVTIGDGA-YTGAGTVVREDVPPGALAVSAGPQRNI  463 (501)
T ss_dssp             SEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEEESSEEECTTC-EECTTCEECSCBCTTCEECCCCCCCCC
T ss_pred             CceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEEcCCcEECCCC-EECCCCEECcccCCCCeEEeccCceec
Confidence            478999999999998743       48999999999999998875  5554 45556777776665542 345665544

>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}

Probab=98.73  E-value=1.5e-08  Score=101.77  Aligned_cols=97  Identities=23%  Similarity=0.335  Sum_probs=62.6

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCC-cEECCCcE-EcCCCEECCCCccCCCCCCEECCCcEEccCCEEC----CC---
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGET-AVIGDNVS-ILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCIL----GN---  324 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~-~~IGdnV~-Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Il----g~---  324 (388)
                      ++.|++++.|+.++.|+.  +++|+.+ ++|+.++. ||. |.|+.  .+.  .+++||++|.|+++++|.    ++   
T Consensus       217 gv~I~p~a~I~~~a~IG~--gv~Ig~g~a~Ig~nv~vIG~-~~I~~--~Ig--~~vvIGdnv~Ig~ga~I~g~l~g~~~~  289 (387)
T 2rij_A          217 NTRILESSKVRMGASLAA--GTTIMPGASYVNFNAGTTGA-CMVEG--RIS--SSAIVGEGSDVGGGASILGVLSGTSGN  289 (387)
T ss_dssp             TCEESCGGGBBTTCBCCT--TCEECSSSCEECTTCEESSC-CEECS--EEC--TTCEECTTCEECTTCEECCBCSSTTCC
T ss_pred             CEEEcCCCEECCCeEEcC--CCEEeCCeeEECCCcEEECC-EEEee--EEC--CCCEECCCCEECCCceEcceecCCCcc
Confidence            566666666666666655  5666664 66666665 555 55542  222  368999999999999743    33   


Q ss_pred             -cEECCCCEECCCCEECCCCCCCcEEEecCcEEec
Q 047635          325 -IKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG  358 (388)
Q Consensus       325 -V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~  358 (388)
                       ++||++|+||+|++-.-.|.+++ ++|.-+.+.+
T Consensus       290 ~VvIGdnv~IGagAv~GV~IGdga-vIGAGsVVt~  323 (387)
T 2rij_A          290 AISVGKACLLGANSVTGIPLGDNC-IVDAGIAVLE  323 (387)
T ss_dssp             BCEECTTCEECTTCEECSCBCTTC-EECTTCEECT
T ss_pred             CeEEeCCCEECCCCcCCcEECCCC-EECCCCEECC
Confidence             99999999999998222235544 3444444443

>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*

Probab=98.61  E-value=3e-08  Score=91.51  Aligned_cols=121  Identities=17%  Similarity=0.237  Sum_probs=83.1

Q ss_pred             eEec-CCcEECCceEEcCCC-----CcEECCCcEECCCcEEcCCCEECCCCccC--CCCCCE---------ECCC----c
Q 047635          255 VDIH-PGAKIGRGLLFDHAT-----GVVVGETAVIGDNVSILHNVTLGGTGKMS--GDRHPK---------IGNG----V  313 (388)
Q Consensus       255 V~Ig-~~a~IG~gv~I~~gt-----gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~--g~~~~~---------IGd~----V  313 (388)
                      +.++ +++.||++++|+.+.     +++|...+.|++++.||.+|.|+.+..+.  +..|..         +|++    +
T Consensus        23 ~i~~~~~i~IG~~~~I~~~~~~~i~~~~i~~~~~i~~~v~IG~~~~Ig~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~  102 (209)
T 1mr7_A           23 ILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHM  102 (209)
T ss_dssp             HHTTSTTEEECTTCEEECSSSCCGGGGEESCCGGGCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGC
T ss_pred             eEcCCCCeEECCCcEEcCCCceEEeceEEeeccccCCCEEECCCCEEcCCCEEEeCCCcccccCccccceEECCcccccc
Confidence            3467 899999999998742     34555666677778888888888766542  111222         1222    2


Q ss_pred             EEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          314 LVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       314 ~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      .+..++.+.++++||++|+||++++|..++  .+++ ++|.-+.+.+.........+.|++.++.
T Consensus       103 ~i~~~~~~~~~v~Ig~~v~IG~~a~I~~gv~Ig~~~-~Igags~V~~~v~~~~i~~G~Pa~~i~~  166 (209)
T 1mr7_A          103 PKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGA-IVAANSVVVKDIAPYMLAGGNPANEIKQ  166 (209)
T ss_dssp             CCGGGSCCCCCEEECSSCEECTTCEECTTCEECTTC-EECTTCEECSCBCTTEEEEETTEEEEEE
T ss_pred             cccccccccCCcEECCCCEEcCCCEEcCCCEECCCC-EEcCCCEEcCCCCCCeEEEeeCCEEeec
Confidence            344455677889999999999999999875  5554 5566778877777777667899876653

>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*

Probab=98.55  E-value=3.3e-07  Score=84.86  Aligned_cols=97  Identities=21%  Similarity=0.200  Sum_probs=60.7

Q ss_pred             CCcEECCCcEEcCCCEECCCC---ccCCC--CCC-E-EC---CCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCC
Q 047635          279 ETAVIGDNVSILHNVTLGGTG---KMSGD--RHP-K-IG---NGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPR  346 (388)
Q Consensus       279 ~~~~IGdnV~Ig~gvtIgg~~---~i~g~--~~~-~-IG---d~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~  346 (388)
                      ..++||++|.|+++|+|...+   .....  .++ . ++   +++.++.++.+.++++||++|+||++++|..++  .++
T Consensus        55 ~~i~IG~~~~Ig~~v~i~~~g~~~h~~~~~s~~p~~~~~~~~~~~~i~~~~~~~~~v~IG~~v~IG~~a~I~~gv~Ig~~  134 (212)
T 1xat_A           55 DKLVIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHEEPAFAGAVNGYQPAGDTLIGHEVWIGTEAMFMPGVRVGHG  134 (212)
T ss_dssp             CCEEECSSCEECTTCEEECSTTTTCCTTSSCCSCGGGCCSCGGGGGCCCCCCCCCCEEECTTCEECTTCEECTTCEECTT
T ss_pred             cCEEEcCCCEECCCCEEEeCCCCccccccccccceeeecccccccccccCceecCCeEECCCCEECCCCEEeCCCEECCC
Confidence            446777777777777762111   11100  000 0 12   235566677777788888888888888888774  555


Q ss_pred             cEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          347 TTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       347 s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      + ++|..+.+.+.........+.|++.++.
T Consensus       135 ~-~IgagsvV~~~vp~~~~~~G~Pa~~i~~  163 (212)
T 1xat_A          135 A-IIGSRALVTGDVEPYAIVGGNPARTIRK  163 (212)
T ss_dssp             C-EECTTCEECSCBCTTEEEETTTTEEEEE
T ss_pred             C-EECCCCEEcccCCCCcEEEccCCEEEcc
Confidence            4 4477788877777666667889876654

>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A

Probab=98.54  E-value=1.3e-07  Score=93.41  Aligned_cols=29  Identities=14%  Similarity=0.127  Sum_probs=15.8

Q ss_pred             CcEECCCCEECCCCEECCC--CCCCcEEEecC
Q 047635          324 NIKIGDGAKIGAGSVVLKD--VPPRTTAVGNP  353 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~d--Vp~~s~VvG~P  353 (388)
                      +++|+.+|.|+ +++|..+  |.+++++.+.+
T Consensus       168 g~~I~~~a~I~-~svI~~~a~I~~~a~V~~~~  198 (334)
T 2pig_A          168 QVQLYGNATIT-HAFIEHRAEVFDFALIEGDK  198 (334)
T ss_dssp             TCEECTTCEEE-SEEECTTCEECTTCEEECCS
T ss_pred             CCEEcCCeEEe-CcEEcCCCEECCCcEECCce
Confidence            34444444444 4444444  57888887765

>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}

Probab=98.38  E-value=3.7e-07  Score=91.50  Aligned_cols=72  Identities=18%  Similarity=0.178  Sum_probs=46.0

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEEC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIG  334 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IG  334 (388)
                      ..+++.+.|+++.   .+.+..+ .++.||++|.| .+++|.         +++||++|.||.||+|. +++||++|.||
T Consensus       303 ~~i~~~~~i~~~~---~~~~~~i-~~~~ig~~~~I-~~~~i~---------~~~ig~~~~I~~~~~i~-~~~i~~~~~i~  367 (420)
T 3brk_X          303 AEITPPAKFVHDD---EDRRGSA-VSSVVSGDCII-SGAALN---------RSLLFTGVRANSYSRLE-NAVVLPSVKIG  367 (420)
T ss_dssp             CCCCCCCEEECBC---SSCBCEE-ESCEECSSCEE-ESCEEE---------SCEECTTCEECTTCEEE-EEEECTTCEEC
T ss_pred             cccCCCcEEeccc---ccCCcEe-cCCEECCCCEE-cCCEEe---------CcEEcCCCEECCCCEEc-ceEEcCCCEEC
Confidence            3345555555421   1123344 35666777777 666663         47888888888888875 67888888888


Q ss_pred             CCCEECC
Q 047635          335 AGSVVLK  341 (388)
Q Consensus       335 agsVV~~  341 (388)
                      +|++|..
T Consensus       368 ~~~~i~~  374 (420)
T 3brk_X          368 RHAQLSN  374 (420)
T ss_dssp             TTCEEEE
T ss_pred             CCCEEec
Confidence            8877754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	388
d1ssqa_	241	b.81.1.6 (A:) Serine acetyltransferase {Haemophilu	5e-73
d1ocxa_	182	b.81.1.3 (A:) Maltose O-acetyltransferase {Escheri	4e-19
d1krra_	200	b.81.1.3 (A:) Galactoside acetyltransferase {Esche	3e-16
d3tdta_	274	b.81.1.2 (A:) Tetrahydrodipicolinate-N-succinlytra	1e-13
d1g97a1	196	b.81.1.4 (A:252-447) N-acetylglucosamine 1-phospha	3e-13
d3bswa1	193	b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylo	1e-12
d1mr7a_	203	b.81.1.3 (A:) Xenobiotic acetyltransferase {Entero	6e-12
d1mr7a_	203	b.81.1.3 (A:) Xenobiotic acetyltransferase {Entero	2e-04
d1xata_	208	b.81.1.3 (A:) Xenobiotic acetyltransferase {Pseudo	6e-12
d2f9ca1	320	b.81.1.7 (A:3-322) Hypothetical protein YdcK {Salm	4e-10
d2f9ca1	320	b.81.1.7 (A:3-322) Hypothetical protein YdcK {Salm	3e-04
d2oi6a1	201	b.81.1.4 (A:252-452) N-acetylglucosamine 1-phospha	7e-10
d1fxja1	78	b.81.1.4 (A:252-329) N-acetylglucosamine 1-phospha	2e-08
d1fxja1	78	b.81.1.4 (A:252-329) N-acetylglucosamine 1-phospha	8e-04
d1j2za_	259	b.81.1.1 (A:) UDP N-acetylglucosamine acyltransfer	1e-06
d1j2za_	259	b.81.1.1 (A:) UDP N-acetylglucosamine acyltransfer	5e-05
d1v3wa_	173	b.81.1.5 (A:) Ferripyochelin binding protein {Arch	1e-06
d1v3wa_	173	b.81.1.5 (A:) Ferripyochelin binding protein {Arch	5e-04
d2jf2a1	262	b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltra	1e-05
d2jf2a1	262	b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltra	2e-05
d2jf2a1	262	b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltra	2e-04
d1xhda_	172	b.81.1.5 (A:) Putative acetyltransferase/acyltrans	2e-05
d1xhda_	172	b.81.1.5 (A:) Putative acetyltransferase/acyltrans	0.001
d1yp2a1	135	b.81.1.4 (A:317-451) Glucose-1-phosphate adenylylt	3e-04
d1yp2a1	135	b.81.1.4 (A:317-451) Glucose-1-phosphate adenylylt	0.001
d1qrea_	210	b.81.1.5 (A:) gamma-carbonic anhydrase {Archaeon M	0.002

>d1ssqa_ b.81.1.6 (A:) Serine acetyltransferase {Haemophilus influenzae [TaxId: 727]} Length = 241

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Serine acetyltransferase
domain: Serine acetyltransferase
species: Haemophilus influenzae [TaxId: 727]

 Score =  225 bits (575), Expect = 5e-73
 Identities = 120/239 (50%), Positives = 166/239 (69%)

Query: 119 DVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFE 178
           ++D+W  ++ EA+   E EP+L+S++ ++IL H++L  AL+  L+ KL++  + + +L E
Sbjct: 2   NLDVWQHIRQEAKELAENEPMLASFFHSTILKHQNLGGALSYLLANKLANPIMPAISLRE 61

Query: 179 LFMGVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGR 238
           +       +  II     D+ A++ RDPA   ++  LL  KGF A Q++RI H LW Q R
Sbjct: 62  IIEEAYQSNPSIIDCAACDIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNR 121

Query: 239 KVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGT 298
           K LAL +QN++S  F VDIHP AKIG G++FDHATG+VVGET+VI ++VSIL  VTLGGT
Sbjct: 122 KSLALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGT 181

Query: 299 GKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           GK SGDRHPK+  GV++GAG  ILGNI++G  AKIGA SVVL  VP   TA G PAR++
Sbjct: 182 GKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV 240

>d1ocxa_ b.81.1.3 (A:) Maltose O-acetyltransferase {Escherichia coli [TaxId: 562]} Length = 182

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Maltose O-acetyltransferase
species: Escherichia coli [TaxId: 562]

 Score = 82.1 bits (202), Expect = 4e-19
 Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 10/115 (8%)

Query: 253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGD-------- 304
           F  D      +G     +    ++      IGDN  +   V +                 
Sbjct: 65  FRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAE 124

Query: 305 --RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
             +   IGN V +G    I   + IGD   + +G+VV KDVP      GNPAR+I
Sbjct: 125 LGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARII 179

>d1krra_ b.81.1.3 (A:) Galactoside acetyltransferase {Escherichia coli [TaxId: 562]} Length = 200

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Galactoside acetyltransferase
species: Escherichia coli [TaxId: 562]

 Score = 74.5 bits (182), Expect = 3e-16
 Identities = 41/116 (35%), Positives = 50/116 (43%), Gaps = 10/116 (8%)

Query: 253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHP----- 307
                     IGR    +    +V   T  IGDNV I  NVTL  TG             
Sbjct: 67  VYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEM 126

Query: 308 -----KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
                 IGN V +G+   I   + IGD + IGAGS+V KD+PP   A G P R+I 
Sbjct: 127 YSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIR 182

>d3tdta_ b.81.1.2 (A:) Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD {Mycobacterium bovis [TaxId: 1765]} Length = 274

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD
domain: Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD
species: Mycobacterium bovis [TaxId: 1765]

 Score = 68.0 bits (166), Expect = 1e-13
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 2/95 (2%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           ++ GA +  G + D  T   VG  A IG NV +   V +GG  +        I +   +G
Sbjct: 128 VNIGAYVDEGTMVD--TWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFIG 185

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG 351
           A + ++  + + +G+ I  G  + +         G
Sbjct: 186 ARSEVVEGVIVEEGSVISMGVYLGQSTRIYDRETG 220

>d1g97a1 b.81.1.4 (A:252-447) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Length = 196

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 65.9 bits (159), Expect = 3e-13
 Identities = 19/52 (36%), Positives = 31/52 (59%)

Query: 306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
              IGN V VG+ + I+  +++GD + +GAGS + KDVP    A+G   ++ 
Sbjct: 142 KTVIGNNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIGRGRQIN 193

>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter jejuni [TaxId: 197]} Length = 193

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: PglD-like
domain: Acetyltransferase PglD
species: Campylobacter jejuni [TaxId: 197]

 Score = 64.2 bits (155), Expect = 1e-12
 Identities = 12/42 (28%), Positives = 25/42 (59%)

Query: 316 GAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           G  +C+L N+ + D + +G G+ ++K+   +   VG PA+ +
Sbjct: 152 GINSCVLPNLSLADDSILGGGATLVKNQDEKGVFVGVPAKRM 193

>d1mr7a_ b.81.1.3 (A:) Xenobiotic acetyltransferase {Enterococcus faecium, VAT(D) [TaxId: 1352]} Length = 203

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Xenobiotic acetyltransferase
species: Enterococcus faecium, VAT(D) [TaxId: 1352]

 Score = 62.2 bits (150), Expect = 6e-12
 Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 7/108 (6%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDR-------HPKI 309
           ++   KIG+         +++       D  +   N+   G  K               I
Sbjct: 57  LNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTII 116

Query: 310 GNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI 357
           GN V +G    I+  +KIGDGA + A SVV+KD+ P   A GNPA  I
Sbjct: 117 GNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEI 164

>d1mr7a_ b.81.1.3 (A:) Xenobiotic acetyltransferase {Enterococcus faecium, VAT(D) [TaxId: 1352]} Length = 203

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Xenobiotic acetyltransferase
species: Enterococcus faecium, VAT(D) [TaxId: 1352]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 9/85 (10%), Positives = 24/85 (28%), Gaps = 15/85 (17%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVL 314
           + ++P                 +       +NV +               ++ +  +  +
Sbjct: 6   MKMYPIEGNKSV--------QFIKPILEKLENVEVGEYSYYD-------SKNGETFDKQI 50

Query: 315 VGAGTCILGNIKIGDGAKIGAGSVV 339
           +     +   +KIG    IG G  +
Sbjct: 51  LYHYPILNDKLKIGKFCSIGPGVTI 75

>d1xata_ b.81.1.3 (A:) Xenobiotic acetyltransferase {Pseudomonas aeruginosa [TaxId: 287]} Length = 208

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Xenobiotic acetyltransferase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 62.0 bits (150), Expect = 6e-12
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 8/105 (7%)

Query: 262 KIGRGLLFD-HATGVVVGETAVIGDNVSILHNVTLGGTGKMSGD-------RHPKIGNGV 313
            IG        A  ++ G      +  S      +      +G            IG+ V
Sbjct: 56  VIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHEEPAFAGAVNGYQPAGDTLIGHEV 115

Query: 314 LVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIG 358
            +G     +  +++G GA IG+ ++V  DV P     GNPAR I 
Sbjct: 116 WIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAIVGGNPARTIR 160

>d2f9ca1 b.81.1.7 (A:3-322) Hypothetical protein YdcK {Salmonella enterica [TaxId: 28901]} Length = 320

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: YdcK-like
domain: Hypothetical protein YdcK
species: Salmonella enterica [TaxId: 28901]

 Score = 58.3 bits (140), Expect = 4e-10
 Identities = 8/75 (10%), Positives = 18/75 (24%), Gaps = 9/75 (12%)

Query: 281 AVIGDNVSILHN-VTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV 339
            ++G +  +    + L             I     +     I   ++I   A + A    
Sbjct: 248 VLVGGHAEVRGGPILLDD--------RVLIEGHACIQGEILIERQVEISGRAAVIAFDDN 299

Query: 340 LKDVPPRTTAVGNPA 354
              +       G   
Sbjct: 300 TIHLRGPKVINGEDR 314

>d2f9ca1 b.81.1.7 (A:3-322) Hypothetical protein YdcK {Salmonella enterica [TaxId: 28901]} Length = 320

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: YdcK-like
domain: Hypothetical protein YdcK
species: Salmonella enterica [TaxId: 28901]

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 9/94 (9%)

Query: 275 VVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIG 334
            +      I  N  I    TL          + +IG+ V +     I    +I D   I 
Sbjct: 64  AMAFAGTEITGNARITQPCTLYN--------NVRIGDNVWID-RADISDGARISDNVTIQ 114

Query: 335 AGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDK 368
           + SV  +        V N + ++  +       +
Sbjct: 115 SSSVREECAIYGDARVLNQSEILAIQGLTHEHAQ 148

>d2oi6a1 b.81.1.4 (A:252-452) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 201

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 56.2 bits (134), Expect = 7e-10
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 281 AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVL 340
           A IGDNV+I            +      IG+ V VG+ T ++  + +G GA I AG+ V 
Sbjct: 119 AEIGDNVNIGAGTITCNYDGAN-KFKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVT 177

Query: 341 KDVPPRTTAVG-NPARLIGGKENP 363
           ++V     A+   P     G   P
Sbjct: 178 RNVGENALAISRVPQTQKEGWRRP 201

>d1fxja1 b.81.1.4 (A:252-329) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 78

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 48.7 bits (116), Expect = 2e-08
 Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 12/81 (14%)

Query: 254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGV 313
             D+      GR +  D    V++     +G  V I     +  +          IG+  
Sbjct: 8   RFDLRGTLTHGRDVEIDT--NVIIEGNVTLGHRVKIGTGCVIKNS---------VIGDDC 56

Query: 314 LVGAGTCILGNIKIGDGAKIG 334
            +     ++ +  +     IG
Sbjct: 57  EISPY-TVVEDANLAAACTIG 76

>d1fxja1 b.81.1.4 (A:252-329) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 78

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 35.6 bits (82), Expect = 8e-04
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 308 KIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV 339
             G  V +     I GN+ +G   KIG G V+
Sbjct: 16  THGRDVEIDTNVIIEGNVTLGHRVKIGTGCVI 47

>d1j2za_ b.81.1.1 (A:) UDP N-acetylglucosamine acyltransferase {Helicobacter pylori [TaxId: 210]} Length = 259

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: UDP N-acetylglucosamine acyltransferase
domain: UDP N-acetylglucosamine acyltransferase
species: Helicobacter pylori [TaxId: 210]

 Score = 47.0 bits (110), Expect = 1e-06
 Identities = 26/132 (19%), Positives = 40/132 (30%), Gaps = 22/132 (16%)

Query: 254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGV 313
           +  I P A+I +G        V +GE  VIGD V +   V              K+ N V
Sbjct: 6   TAIISPKAEINKG--------VEIGEFCVIGDGVKLDEGV--------------KLHNNV 43

Query: 314 LVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSFT 373
            +   T +  N +I   A +G     LK     +  +     LI          +     
Sbjct: 44  TLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIREFCMINPGTEGGIKK 103

Query: 374 MDHTSHIHEWSD 385
                     + 
Sbjct: 104 TLIGDKNLLMAY 115

>d1j2za_ b.81.1.1 (A:) UDP N-acetylglucosamine acyltransferase {Helicobacter pylori [TaxId: 210]} Length = 259

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: UDP N-acetylglucosamine acyltransferase
domain: UDP N-acetylglucosamine acyltransferase
species: Helicobacter pylori [TaxId: 210]

 Score = 41.9 bits (97), Expect = 5e-05
 Identities = 15/110 (13%), Positives = 32/110 (29%), Gaps = 22/110 (20%)

Query: 277 VGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAG 336
           + +TA+I                        +I  GV +G    I   +K+ +G K+   
Sbjct: 3   IAKTAIISPKA--------------------EINKGVEIGEFCVIGDGVKLDEGVKLHNN 42

Query: 337 SVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHTSHIHEWSDY 386
             +             P  ++G    P  L     ++       +   ++
Sbjct: 43  VTLQGHTFVGKNTEIFPFAVLG--TQPQDLKYKGEYSELIIGEDNLIREF 90

>d1v3wa_ b.81.1.5 (A:) Ferripyochelin binding protein {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 173

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: gamma-carbonic anhydrase-like
domain: Ferripyochelin binding protein
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 46.1 bits (108), Expect = 1e-06
 Identities = 31/141 (21%), Positives = 50/141 (35%), Gaps = 44/141 (31%)

Query: 254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGK------------- 300
              IHP A +            VV    V+ +  S+  +  L G  +             
Sbjct: 10  KPRIHPSAFVDEN--------AVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDN 61

Query: 301 ---------------------MSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV 339
                                 +     K+GN V++G  + IL   KIGD   IGAG+VV
Sbjct: 62  VSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVV 121

Query: 340 L--KDVPPRTTAVGNPARLIG 358
              K++P  +  +G P +++ 
Sbjct: 122 PPNKEIPDYSLVLGVPGKVVR 142

>d1v3wa_ b.81.1.5 (A:) Ferripyochelin binding protein {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 173

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: gamma-carbonic anhydrase-like
domain: Ferripyochelin binding protein
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 38.4 bits (88), Expect = 5e-04
 Identities = 4/35 (11%), Positives = 14/35 (40%)

Query: 303 GDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGS 337
             + P+I     V     ++G++ + +   +   +
Sbjct: 7   NGKKPRIHPSAFVDENAVVIGDVVLEEKTSVWPSA 41

>d2jf2a1 b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltransferase {Escherichia coli, gene lpxA [TaxId: 562]} Length = 262

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: UDP N-acetylglucosamine acyltransferase
domain: UDP N-acetylglucosamine acyltransferase
species: Escherichia coli, gene lpxA [TaxId: 562]

 Score = 44.1 bits (103), Expect = 1e-05
 Identities = 21/132 (15%), Positives = 37/132 (28%), Gaps = 22/132 (16%)

Query: 257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG 316
           I   A +       H T  +V E A IG N  I                   +G  V +G
Sbjct: 2   IDKSAFV-------HPT-AIVEEGASIGANAHIGPFCI--------------VGPHVEIG 39

Query: 317 AGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH 376
            GT +  ++ +    KIG  + + +                  +      ++I      H
Sbjct: 40  EGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIH 99

Query: 377 TSHIHEWSDYVI 388
              +       +
Sbjct: 100 RGTVQGGGLTKV 111

>d2jf2a1 b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltransferase {Escherichia coli, gene lpxA [TaxId: 562]} Length = 262

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: UDP N-acetylglucosamine acyltransferase
domain: UDP N-acetylglucosamine acyltransferase
species: Escherichia coli, gene lpxA [TaxId: 562]

 Score = 43.3 bits (101), Expect = 2e-05
 Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 14/64 (21%)

Query: 276 VVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGA 335
           ++ ++A +     +                   IG    +G    +  +++IG+G  + +
Sbjct: 1   MIDKSAFVHPTAIVEEGA--------------SIGANAHIGPFCIVGPHVEIGEGTVLKS 46

Query: 336 GSVV 339
             VV
Sbjct: 47  HVVV 50

>d2jf2a1 b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltransferase {Escherichia coli, gene lpxA [TaxId: 562]} Length = 262

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: UDP N-acetylglucosamine acyltransferase
domain: UDP N-acetylglucosamine acyltransferase
species: Escherichia coli, gene lpxA [TaxId: 562]

 Score = 40.6 bits (94), Expect = 2e-04
 Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 11/135 (8%)

Query: 254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGV 313
           +  +  GA IG           +VG    IG+   +  +V + G  K+  D    I    
Sbjct: 11  TAIVEEGASIGANAHIGP--FCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNE--IYQFA 66

Query: 314 LVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENPFMLDKIPSFT 373
            +G     L         +IG  + + + V      V        G +N  M        
Sbjct: 67  SIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLM-------I 119

Query: 374 MDHTSHIHEWSDYVI 388
             H +H     +  I
Sbjct: 120 NAHIAHDCTVGNRCI 134

>d1xhda_ b.81.1.5 (A:) Putative acetyltransferase/acyltransferase BC4754 {Bacillus cereus [TaxId: 1396]} Length = 172

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: gamma-carbonic anhydrase-like
domain: Putative acetyltransferase/acyltransferase BC4754
species: Bacillus cereus [TaxId: 1396]

 Score = 42.3 bits (98), Expect = 2e-05
 Identities = 35/141 (24%), Positives = 48/141 (34%), Gaps = 44/141 (31%)

Query: 254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGD--------- 304
              I   A I        A  V +     +G+  SI  N  + G    +           
Sbjct: 12  KPKIASSAFI--------ADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQ 63

Query: 305 -------------------------RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV 339
                                        I    L+G G+ IL   +IG+GA IGAGS+V
Sbjct: 64  CTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLV 123

Query: 340 L--KDVPPRTTAVGNPARLIG 358
              K +PP T A G PA++I 
Sbjct: 124 SQGKKIPPNTLAFGRPAKVIR 144

>d1xhda_ b.81.1.5 (A:) Putative acetyltransferase/acyltransferase BC4754 {Bacillus cereus [TaxId: 1396]} Length = 172

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: gamma-carbonic anhydrase-like
domain: Putative acetyltransferase/acyltransferase BC4754
species: Bacillus cereus [TaxId: 1396]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 7/34 (20%), Positives = 16/34 (47%)

Query: 303 GDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAG 336
            ++ PKI +   +     I G++ +G+ + I   
Sbjct: 9   KEKKPKIASSAFIADYVTITGDVYVGEESSIWFN 42

>d1yp2a1 b.81.1.4 (A:317-451) Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 135

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain
species: Potato (Solanum tuberosum) [TaxId: 4113]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 16/95 (16%)

Query: 245 IQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGD 304
             +   ++ +        IG+          ++ + A IGDNV I          K +  
Sbjct: 57  ETDADRKLLAAKGSVPIGIGKNCHIKR---AIIDKNARIGDNVKI--------INKDNVQ 105

Query: 305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVV 339
              +  +G  + +G        +   A I +G ++
Sbjct: 106 EAARETDGYFIKSGIVT-----VIKDALIPSGIII 135

>d1yp2a1 b.81.1.4 (A:317-451) Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 135

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain
species: Potato (Solanum tuberosum) [TaxId: 4113]

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 5/91 (5%)

Query: 255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGG---TGKMSGDRHPKIGN 311
             I  GA I   LL          +             + +G      +   D++ +IG+
Sbjct: 37  SCISEGAIIEDSLLMGAD--YYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGD 94

Query: 312 GVLVGAGTCILGNIKIGDGAKIGAGSVVLKD 342
            V +     +    +  DG  I +G V +  
Sbjct: 95  NVKIINKDNVQEAARETDGYFIKSGIVTVIK 125

>d1qrea_ b.81.1.5 (A:) gamma-carbonic anhydrase {Archaeon Methanosarcina thermophila [TaxId: 2210]} Length = 210

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: gamma-carbonic anhydrase-like
domain: gamma-carbonic anhydrase
species: Archaeon Methanosarcina thermophila [TaxId: 2210]

 Score = 36.9 bits (84), Expect = 0.002
 Identities = 9/84 (10%), Positives = 22/84 (26%), Gaps = 8/84 (9%)

Query: 304 DRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKENP 363
              P I     +     ++G + IG    +   + +  D              +G + N 
Sbjct: 20  PSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDE--------GMPIFVGDRSNV 71

Query: 364 FMLDKIPSFTMDHTSHIHEWSDYV 387
                + +    +        + V
Sbjct: 72  QDGVVLHALETINEEGEPIEDNIV 95

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	388
d1ssqa_	241	Serine acetyltransferase {Haemophilus influenzae [	100.0
d1ocxa_	182	Maltose O-acetyltransferase {Escherichia coli [Tax	99.84
d1krra_	200	Galactoside acetyltransferase {Escherichia coli [T	99.83
d3bswa1	193	Acetyltransferase PglD {Campylobacter jejuni [TaxI	99.78
d1xata_	208	Xenobiotic acetyltransferase {Pseudomonas aerugino	99.77
d1mr7a_	203	Xenobiotic acetyltransferase {Enterococcus faecium	99.76
d1j2za_	259	UDP N-acetylglucosamine acyltransferase {Helicobac	99.73
d1g97a1	196	N-acetylglucosamine 1-phosphate uridyltransferase	99.71
d1ssqa_	241	Serine acetyltransferase {Haemophilus influenzae [	99.7
d2jf2a1	262	UDP N-acetylglucosamine acyltransferase {Escherich	99.69
d1xhda_	172	Putative acetyltransferase/acyltransferase BC4754	99.67
d1v3wa_	173	Ferripyochelin binding protein {Archaeon Pyrococcu	99.67
d2oi6a1	201	N-acetylglucosamine 1-phosphate uridyltransferase	99.63
d3tdta_	274	Tetrahydrodipicolinate-N-succinlytransferase, THDP	99.59
d3bswa1	193	Acetyltransferase PglD {Campylobacter jejuni [TaxI	99.55
d1krra_	200	Galactoside acetyltransferase {Escherichia coli [T	99.39
d1qrea_	210	gamma-carbonic anhydrase {Archaeon Methanosarcina	99.37
d2jf2a1	262	UDP N-acetylglucosamine acyltransferase {Escherich	99.29
d1j2za_	259	UDP N-acetylglucosamine acyltransferase {Helicobac	99.27
d1ocxa_	182	Maltose O-acetyltransferase {Escherichia coli [Tax	99.27
d1qrea_	210	gamma-carbonic anhydrase {Archaeon Methanosarcina	99.19
d1fxja1	78	N-acetylglucosamine 1-phosphate uridyltransferase	99.17
d1g97a1	196	N-acetylglucosamine 1-phosphate uridyltransferase	99.08
d1xhda_	172	Putative acetyltransferase/acyltransferase BC4754	98.96
d1mr7a_	203	Xenobiotic acetyltransferase {Enterococcus faecium	98.96
d3tdta_	274	Tetrahydrodipicolinate-N-succinlytransferase, THDP	98.91
d1v3wa_	173	Ferripyochelin binding protein {Archaeon Pyrococcu	98.86
d1fxja1	78	N-acetylglucosamine 1-phosphate uridyltransferase	98.83
d1yp2a1	135	Glucose-1-phosphate adenylyltransferase small subu	98.68
d1xata_	208	Xenobiotic acetyltransferase {Pseudomonas aerugino	98.64
d1yp2a1	135	Glucose-1-phosphate adenylyltransferase small subu	98.62
d2f9ca1	320	Hypothetical protein YdcK {Salmonella enterica [Ta	98.3
d2oi6a1	201	N-acetylglucosamine 1-phosphate uridyltransferase	98.18
d2f9ca1	320	Hypothetical protein YdcK {Salmonella enterica [Ta	97.92

>d1ssqa_ b.81.1.6 (A:) Serine acetyltransferase {Haemophilus influenzae [TaxId: 727]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Serine acetyltransferase
domain: Serine acetyltransferase
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=1.9e-53  Score=402.17  Aligned_cols=238  Identities=50%  Similarity=0.811  Sum_probs=234.4

Q ss_pred             hHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccchHHHHHHHHHHhhhcHHHHHHHHHHHH
Q 047635          120 VDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQSGTLFELFMGVIVEDQEIIKAVKADLI  199 (388)
Q Consensus       120 ~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~~~~l~~~~~~~l~~~p~i~~~i~~Dl~  199 (388)
                      .++|++||+||+..+++||.|++||+..||+|++|+++|+++||++|.+..+....+++++.+++..+|++.+.+++|+.
T Consensus         3 ~~iW~~i~~ea~~~~~~EP~L~~~~~~~IL~~~s~~~aLs~~la~kL~~~~~~~~~~~~i~~e~~~~~~~i~~~~~~Dl~   82 (241)
T d1ssqa_           3 LDVWQHIRQEAKELAENEPMLASFFHSTILKHQNLGGALSYLLANKLANPIMPAISLREIIEEAYQSNPSIIDCAACDIQ   82 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHCHHHHHHHHHHTTTSSSHHHHHHHHHHHHHCBTTBCHHHHHHHHHHHHHHCTHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhCcHHHHHHHHhhhcCCCHHHHHHHHHHHHhCCCccchhhHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCcEECCceEEcCCCCcEECC
Q 047635          200 AIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGAKIGRGLLFDHATGVVVGE  279 (388)
Q Consensus       200 a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~  279 (388)
                      +.++|||+|..+..++++|+||++++.||++||+|..+...++.+++.++...++++||+++.||+|++|+|+.+++||+
T Consensus        83 a~~~rDpa~~~~~~~~L~~~Gf~Al~~yRiah~l~~~~~~~la~~i~~~~~~~~g~~I~~~~~Ig~g~~i~h~~givig~  162 (241)
T d1ssqa_          83 AVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSLALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVGE  162 (241)
T ss_dssp             HHHHHCTTCCCTHHHHHHCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHSCEECTTCEECSSCEESSCTTCEECT
T ss_pred             HHHccCccccceeeeeehhhhHHHHHHHhhhhhhhhhhhHHHHHHHHHHHhhheeeccccCCEEccCcccCccceEEEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEe
Q 047635          280 TAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI  357 (388)
Q Consensus       280 ~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi  357 (388)
                      ++.||+||+|.+++++++.....+.++++|||||+||+||+|++|++||++|+|||||+|++|||++++++|+|||+|
T Consensus       163 ~~~ig~~~~i~~~v~~~~~~~~~~~~~~~Ig~~v~IGaga~Ilg~v~IG~~a~IgAgsvV~kdVp~~~vv~G~PAr~I  240 (241)
T d1ssqa_         163 TSVIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV  240 (241)
T ss_dssp             TCEECTTCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEECTTCEECSCBCTTCEEETTTTEEC
T ss_pred             cceecCCeeecccccccccccCCCCCCCccCCCeEECCCCEEcCCcEECCCCEECCCCEECCCCCCCCEEEecCcEEe
Confidence            999999999999999999998888899999999999999999999999999999999999999999999999999997

>d1ocxa_ b.81.1.3 (A:) Maltose O-acetyltransferase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Maltose O-acetyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.4e-21  Score=175.76  Aligned_cols=108  Identities=23%  Similarity=0.330  Sum_probs=84.4

Q ss_pred             eeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccC----CCCCCEECCCcEEccCCEECCCcEE
Q 047635          252 VFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMS----GDRHPKIGNGVLVGAGTCILGNIKI  327 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~----g~~~~~IGd~V~IGaga~Ilg~V~I  327 (388)
                      ..++.||+++.|+.||.|..+..++||+++.||++|+|+++++++......    ....++||++||||++|+|+++|+|
T Consensus        70 G~ni~IG~~~~I~~~~~I~d~~~I~IG~~~~Ig~~v~I~~~~~~~~~~~~~~~~~~~~~v~Ig~~~~iG~~~~I~~Gv~I  149 (182)
T d1ocxa_          70 GYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTI  149 (182)
T ss_dssp             STTEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTTCEE
T ss_pred             ccceeECCccEECCCcEEecCCeEEECCCeEECcCceEeecccccceeeeeccceEcceeEECceEeeCceeeccCcEEE
Confidence            344666666666666666655566777777777777776666555422211    1246899999999999999999999


Q ss_pred             CCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          328 GDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       328 Gd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      |++|+|||||+|++|||++++++|+|||++++
T Consensus       150 G~~~vIgagsvV~kdvp~~~i~~G~PAk~ir~  181 (182)
T d1ocxa_         150 GDNVVVASGAVVTKDVPDNVVVGGNPARIIKK  181 (182)
T ss_dssp             CTTCEECTTCEECSCBCSSEEEETTTTEEEEE
T ss_pred             CCCCEECCCCEEccCCCCCeEEEeeCCEEEee
Confidence            99999999999999999999999999999975

>d1krra_ b.81.1.3 (A:) Galactoside acetyltransferase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Galactoside acetyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=7.9e-21  Score=173.16  Aligned_cols=103  Identities=39%  Similarity=0.572  Sum_probs=74.6

Q ss_pred             cCCcEECCceEEcCCCCcEE--CCCcEECCCcEEcCCCEECCCCccCC----------CCCCEECCCcEEccCCEECCCc
Q 047635          258 HPGAKIGRGLLFDHATGVVV--GETAVIGDNVSILHNVTLGGTGKMSG----------DRHPKIGNGVLVGAGTCILGNI  325 (388)
Q Consensus       258 g~~a~IG~gv~I~~gtgVvI--G~~~~IGdnV~Ig~gvtIgg~~~i~g----------~~~~~IGd~V~IGaga~Ilg~V  325 (388)
                      |.++.||++++|+.  +++|  +..+.||+||.|+++|+|+.......          ..+++||++||||++|+|++++
T Consensus        72 G~nv~IG~~~~I~~--~~~I~~~~~i~IG~~v~Ig~~v~I~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~Gv  149 (200)
T d1krra_          72 GSNIHIGRNFYANF--NLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGV  149 (200)
T ss_dssp             STTEEECSSCEECS--CEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECTTC
T ss_pred             CCccEECCccEECc--eEEEecCCCcEeCCCccccceeEEecccccceecccccceeecceEEEccCcccceeeeccccc
Confidence            44444455554444  3444  23345555555555555543221111          1357999999999999999999


Q ss_pred             EECCCCEECCCCEECCCCCCCcEEEecCcEEeccCCC
Q 047635          326 KIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       326 ~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~  362 (388)
                      +||++|+||+||+|++|||++++++|+|||++++...
T Consensus       150 ~IG~~~vIgagSvV~kdvp~~~iv~G~PArvik~~~~  186 (200)
T d1krra_         150 TIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREIND  186 (200)
T ss_dssp             EECTTCEECTTCEECSCBCTTEEEETTTTEEEEECCG
T ss_pred             ccCCCcEEeCCCEEeeEcCCCcEEEEeCCEEEEeCCH
Confidence            9999999999999999999999999999999987653

>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter jejuni [TaxId: 197]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: PglD-like
domain: Acetyltransferase PglD
species: Campylobacter jejuni [TaxId: 197]

Probab=99.78  E-value=3.2e-19  Score=161.08  Aligned_cols=52  Identities=29%  Similarity=0.646  Sum_probs=50.3

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEe
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLI  357 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi  357 (388)
                      +++||++|+||+||+|.++++||++|+||+||+|++|||++++++|+|||.+
T Consensus       142 ~v~Ig~~~~IG~~s~I~~~v~Ig~~~~IgagsvV~~dv~~~~~~~G~PAk~i  193 (193)
T d3bswa1         142 NVKIGKNCFLGINSCVLPNLSLADDSILGGGATLVKNQDEKGVFVGVPAKRM  193 (193)
T ss_dssp             TCEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCSCCEECCCCCCCC
T ss_pred             cceeeccccCCceeeEcCCeEECCCCEECCCCEECcCCCCCcEEEEeCCEEC
Confidence            6899999999999999999999999999999999999999999999999864

>d1xata_ b.81.1.3 (A:) Xenobiotic acetyltransferase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Xenobiotic acetyltransferase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.77  E-value=3.7e-19  Score=162.72  Aligned_cols=57  Identities=33%  Similarity=0.556  Sum_probs=54.5

Q ss_pred             CCCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEeccCC
Q 047635          305 RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       305 ~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~  361 (388)
                      ++++|||+|+||++|+|+++++||++|+|||||+|++|+|++++++|+|||+++++.
T Consensus       107 g~v~Igd~v~IG~~s~I~~gv~IG~~~vIgagSvVtkdvp~~si~~G~PAk~ik~R~  163 (208)
T d1xata_         107 GDTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAIVGGNPARTIRKRF  163 (208)
T ss_dssp             CCEEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEEETTTTEEEEESS
T ss_pred             CCEEEcCCeEECccccccCCeEeCCCCEEeCceEEeecCCcCcEEEecCCEEEeccC
Confidence            358999999999999999999999999999999999999999999999999998864

>d1mr7a_ b.81.1.3 (A:) Xenobiotic acetyltransferase {Enterococcus faecium, VAT(D) [TaxId: 1352]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Xenobiotic acetyltransferase
species: Enterococcus faecium, VAT(D) [TaxId: 1352]

Probab=99.76  E-value=8.5e-19  Score=159.30  Aligned_cols=89  Identities=36%  Similarity=0.452  Sum_probs=72.7

Q ss_pred             CcEECCCcEECCCcEEcCCCEECCCCcc---------------------------CCCCCCEECCCcEEccCCEECCCcE
Q 047635          274 GVVVGETAVIGDNVSILHNVTLGGTGKM---------------------------SGDRHPKIGNGVLVGAGTCILGNIK  326 (388)
Q Consensus       274 gVvIG~~~~IGdnV~Ig~gvtIgg~~~i---------------------------~g~~~~~IGd~V~IGaga~Ilg~V~  326 (388)
                      .++|++++.||++|.|+++|+|...+..                           ....+++|||+|+||++|+|+++++
T Consensus        54 ~~~I~~~v~IG~~~~Ig~gv~I~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~~i~g~v~IGd~v~IG~~~~I~~gv~  133 (203)
T d1mr7a_          54 YPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVK  133 (203)
T ss_dssp             CGGGCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGGGSCCCCCEEECSSCEECTTCEECTTCE
T ss_pred             eCEECCccEECCCeEECCCCcEeeecCcEeccCceEeeeeecccccCcccccccccCccCeEECCEEEECCceeEEeEEE
Confidence            5566667778888888877776322110                           0113589999999999999999999


Q ss_pred             ECCCCEECCCCEECCCCCCCcEEEecCcEEeccCCC
Q 047635          327 IGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGGKEN  362 (388)
Q Consensus       327 IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~~~~  362 (388)
                      ||++|+|||||+|++|||++++++|+|||+++++..
T Consensus       134 IG~~~~IgagSvV~kdv~~~~i~~G~PAk~ik~r~~  169 (203)
T d1mr7a_         134 IGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFD  169 (203)
T ss_dssp             ECTTCEECTTCEECSCBCTTEEEEETTEEEEEESSC
T ss_pred             EcCCCEEecCeEEeeeCCCCEEEEEeCCEEEeccCC
Confidence            999999999999999999999999999999998653

>d1j2za_ b.81.1.1 (A:) UDP N-acetylglucosamine acyltransferase {Helicobacter pylori [TaxId: 210]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: UDP N-acetylglucosamine acyltransferase
domain: UDP N-acetylglucosamine acyltransferase
species: Helicobacter pylori [TaxId: 210]

Probab=99.73  E-value=4.8e-18  Score=159.41  Aligned_cols=54  Identities=39%  Similarity=0.476  Sum_probs=51.6

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      +++|||+|+||.++.|.++++||++|+||++|+|++|||++++++|+|||+.+.
T Consensus       139 ~v~Ig~~v~IG~~s~I~~gv~IG~~a~IgagSvV~kdVp~~~i~~G~PA~~~g~  192 (259)
T d1j2za_         139 HIEIGDYVNIGGLTAIHQFVRIAKGCMIAGKSALGKDVPPYCTVEGNRAFIRGL  192 (259)
T ss_dssp             TCEECSSCEECTTCEECTTCEECTTCEECTTCEECSBBCTTEEEETTBTEEEEE
T ss_pred             cccccccceecceeeeecccEeccceeeeeeeeeccccccceeEEecccccccc
Confidence            578999999999999999999999999999999999999999999999999753

>d1g97a1 b.81.1.4 (A:252-447) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.71  E-value=1.9e-17  Score=146.39  Aligned_cols=54  Identities=35%  Similarity=0.668  Sum_probs=51.8

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      +++||++||||.+++|+++++||++++||+||+|++|||++++++|+|||++|+
T Consensus       142 ~~~Ig~~~~iG~~~~I~~gv~IG~~s~IgagsvVtkdvp~~~i~~G~Pak~~k~  195 (196)
T d1g97a1         142 KTVIGNNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIGRGRQINKD  195 (196)
T ss_dssp             CEEECTTCEECTTCEEESSCEECTTCEECTTCEECSCBCTTCEECCCCCCCCCC
T ss_pred             eeEEecCCEEeeeeEEcCCcEECCCCEECCCCEECcCcCCCCEEEecCCEEecC
Confidence            467999999999999999999999999999999999999999999999999875

>d1ssqa_ b.81.1.6 (A:) Serine acetyltransferase {Haemophilus influenzae [TaxId: 727]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Serine acetyltransferase
domain: Serine acetyltransferase
species: Haemophilus influenzae [TaxId: 727]

Probab=99.70  E-value=1e-17  Score=156.51  Aligned_cols=169  Identities=14%  Similarity=0.149  Sum_probs=125.5

Q ss_pred             cccccccccccCCCCchHHHHHHHHHHHHhhhcCCcccchhhhhccCCCCHHHHHHHHHHhhhcCcccc--hHHHHHHHH
Q 047635          104 QAIHTRSNIDDGDDADVDLWLKMQDEARSDVEEEPVLSSYYFASILSHKSLESALAKHLSIKLSSLSLQ--SGTLFELFM  181 (388)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~w~~i~~e~~~~~~~eP~l~~~~~~~il~~~~~~~~la~~la~~L~~~~~~--~~~l~~~~~  181 (388)
                      .....++.+.++....+++.+.+++|+++..++||+..++++ ++|.+++|++.++||+||.|+.....  +..+.....
T Consensus        55 ~~~~~~~i~~e~~~~~~~i~~~~~~Dl~a~~~rDpa~~~~~~-~~L~~~Gf~Al~~yRiah~l~~~~~~~la~~i~~~~~  133 (241)
T d1ssqa_          55 PAISLREIIEEAYQSNPSIIDCAACDIQAVRHRDPAVELWST-PLLYLKGFHAIQSYRITHYLWNQNRKSLALYLQNQIS  133 (241)
T ss_dssp             CHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHCTTCCCTHH-HHHHCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHhcCHHHHHHHHHHHHHHHccCccccceee-eeehhhhHHHHHHHhhhhhhhhhhhHHHHHHHHHHHh
Confidence            333445566667777789999999999999999999999887 89999999999999999999976331  111111111


Q ss_pred             HHhhhcHHHHHHHHHHHHHHhhcCccccccceeeeccchhHHHHHHHHHHHHHHhcchHHHHHHHhccceeeeeEecCCc
Q 047635          182 GVIVEDQEIIKAVKADLIAIKERDPACISYAHCLLNFKGFLACQAHRIAHRLWLQGRKVLALLIQNRVSEVFSVDIHPGA  261 (388)
Q Consensus       182 ~~l~~~p~i~~~i~~Dl~a~~~rDPa~~~~~~~ll~~~gf~al~~~Ria~~l~~~g~~~la~~i~~~~~~~~gV~Ig~~a  261 (388)
                                      ...-.+..|.+......+                                 +.+..++.||+++
T Consensus       134 ----------------~~~g~~I~~~~~Ig~g~~---------------------------------i~h~~givig~~~  164 (241)
T d1ssqa_         134 ----------------VAFDVDIHPAAKIGHGIM---------------------------------FDHATGIVVGETS  164 (241)
T ss_dssp             ----------------HHHSCEECTTCEECSSCE---------------------------------ESSCTTCEECTTC
T ss_pred             ----------------hheeeccccCCEEccCcc---------------------------------cCccceEEEeccc
Confidence                            111223334443222222                                 2335678999999


Q ss_pred             EECCceEEcCCCCcEECCC--------cEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEE
Q 047635          262 KIGRGLLFDHATGVVVGET--------AVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI  333 (388)
Q Consensus       262 ~IG~gv~I~~gtgVvIG~~--------~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~I  333 (388)
                      .||+++.|.+  ++++|..        ++||+||.||.|++|.+        +++||+++.||+|++|.++  |.+++++
T Consensus       165 ~ig~~~~i~~--~v~~~~~~~~~~~~~~~Ig~~v~IGaga~Ilg--------~v~IG~~a~IgAgsvV~kd--Vp~~~vv  232 (241)
T d1ssqa_         165 VIENDVSILQ--GVTLGGTGKESGDRHPKVREGVMIGAGAKILG--------NIEVGKYAKIGANSVVLNP--VPEYATA  232 (241)
T ss_dssp             EECTTCEECT--TCEEECCSSSCSSCSCEECTTCEECTTCEEES--------SCEECTTCEECTTCEECSC--BCTTCEE
T ss_pred             eecCCeeecc--cccccccccCCCCCCCccCCCeEECCCCEEcC--------CcEECCCCEECCCCEECCC--CCCCCEE
Confidence            9999999998  7777654        68999999999998876        6999999999999999998  4666655


Q ss_pred             C
Q 047635          334 G  334 (388)
Q Consensus       334 G  334 (388)
                      +
T Consensus       233 ~  233 (241)
T d1ssqa_         233 A  233 (241)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d2jf2a1 b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltransferase {Escherichia coli, gene lpxA [TaxId: 562]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: UDP N-acetylglucosamine acyltransferase
domain: UDP N-acetylglucosamine acyltransferase
species: Escherichia coli, gene lpxA [TaxId: 562]

Probab=99.69  E-value=8.8e-17  Score=151.31  Aligned_cols=108  Identities=26%  Similarity=0.326  Sum_probs=93.2

Q ss_pred             eeeeEecCCcEECCceEEcCCC-----CcEECCCcEECCCcEEcCCCEECCCCccCC----CCCCEECCCcEEccCCEEC
Q 047635          252 VFSVDIHPGAKIGRGLLFDHAT-----GVVVGETAVIGDNVSILHNVTLGGTGKMSG----DRHPKIGNGVLVGAGTCIL  322 (388)
Q Consensus       252 ~~gV~Ig~~a~IG~gv~I~~gt-----gVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g----~~~~~IGd~V~IGaga~Il  322 (388)
                      ...+.||.++.||.++.|+.++     .++||+++.|.+++.|+++|.||.+..+..    ..+++||++|+||+++.|.
T Consensus        81 ~~~v~IG~~v~ig~~~~i~~~~~~~~~~T~IG~~~~i~~~~~I~h~~~IG~~~~i~~~~~i~g~~~Ig~~v~ig~~~~i~  160 (262)
T d2jf2a1          81 PTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH  160 (262)
T ss_dssp             CCEEEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred             CceEEECCeeeecceEeccCccccCccceEECCCCEEecccccccccccCCCeeecCccccccceeeCceEEeccCceec
Confidence            3468899999999999998754     167888888888888888888877665544    2479999999999999999


Q ss_pred             CCcEECCCCEECCCCEECCCCCCCcEEEecCcEEecc
Q 047635          323 GNIKIGDGAKIGAGSVVLKDVPPRTTAVGNPARLIGG  359 (388)
Q Consensus       323 g~V~IGd~v~IGagsVV~~dVp~~s~VvG~PArvi~~  359 (388)
                      ++++||++++||++|+|++|||++++++|+||+..+.
T Consensus       161 ~~v~IG~~a~igagS~Vtkdvp~~~~~~G~PA~~~~~  197 (262)
T d2jf2a1         161 QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGV  197 (262)
T ss_dssp             TTCEECTTCEECSSCEECSBBCTTEEEEEBTEEEEEE
T ss_pred             cccEeehhceeeccceEeecCCcccccCCCCceeeee
Confidence            9999999999999999999999999999999999754

>d1xhda_ b.81.1.5 (A:) Putative acetyltransferase/acyltransferase BC4754 {Bacillus cereus [TaxId: 1396]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: gamma-carbonic anhydrase-like
domain: Putative acetyltransferase/acyltransferase BC4754
species: Bacillus cereus [TaxId: 1396]

Probab=99.67  E-value=1.3e-16  Score=140.23  Aligned_cols=56  Identities=43%  Similarity=0.713  Sum_probs=52.0

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECC--CCCCCcEEEecCcEEeccCC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK--DVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~--dVp~~s~VvG~PArvi~~~~  361 (388)
                      ++.||++|+||.+++|+++++||++|+||+||+|++  +||++++++|+|||++++..
T Consensus        90 ~~~i~~~~~ig~~~~i~~gv~IG~~~~IgagsvV~~~~~i~~~~v~~G~Pak~i~~~~  147 (172)
T d1xhda_          90 SCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVSQGKKIPPNTLAFGRPAKVIRELT  147 (172)
T ss_dssp             SCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEEEETTEEEEEECC
T ss_pred             ccccccceEEecccEeeCCcEEcCcccccceEEEeeCeEECCCeEEEecCcEEECCCC
Confidence            478999999999999999999999999999999995  68999999999999998654

>d1v3wa_ b.81.1.5 (A:) Ferripyochelin binding protein {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: gamma-carbonic anhydrase-like
domain: Ferripyochelin binding protein
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.67  E-value=6.9e-17  Score=142.00  Aligned_cols=106  Identities=25%  Similarity=0.397  Sum_probs=78.4

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEc---------CCCEECCCCcc----------------CC---CC
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSIL---------HNVTLGGTGKM----------------SG---DR  305 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig---------~gvtIgg~~~i----------------~g---~~  305 (388)
                      .+.||++++|++++.|..  +++||+++.||++|.|+         .++.++.....                ..   ..
T Consensus        10 ~~~I~~~~~I~~~a~I~g--~v~IG~~~~Ig~~~~I~~~~~~v~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (173)
T d1v3wa_          10 KPRIHPSAFVDENAVVIG--DVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVH   87 (173)
T ss_dssp             CCEECTTCEECTTSEEEE--EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEE
T ss_pred             CCEECcCcEECCCCEEeC--ceEECCCCEECCCccccccccccccccccccccccccccccCCCcccCcceeeeeeeeee
Confidence            345777777777777665  66777776666666553         22222222111                00   12


Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECC--CCCCCcEEEecCcEEeccCC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLK--DVPPRTTAVGNPARLIGGKE  361 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~--dVp~~s~VvG~PArvi~~~~  361 (388)
                      .+.||++|+||++|+|.++++||++|+||+||+|.+  +||++++++|+|||++++..
T Consensus        88 ~~~Ig~~~~ig~~~~i~~gv~Ig~~~vIgagsvV~~~~~i~~~~iv~G~Pak~i~~~~  145 (173)
T d1v3wa_          88 GAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVPPNKEIPDYSLVLGVPGKVVRQLT  145 (173)
T ss_dssp             SCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEECTTEEEEETTEEEEEECC
T ss_pred             eeecCCcccccceeeecCCEEEcceeEEcCCcEEeCCeEeCCCCEEcCCCceEecCCC
Confidence            489999999999999999999999999999999995  58999999999999997643

>d2oi6a1 b.81.1.4 (A:252-452) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=1.4e-16  Score=142.03  Aligned_cols=58  Identities=31%  Similarity=0.550  Sum_probs=53.7

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEe-cCcEEeccCCCC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVG-NPARLIGGKENP  363 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG-~PArvi~~~~~~  363 (388)
                      +++|||+|+||.++.|.++++||++++||+||+|.+|||++++++| .|++.++.|++|
T Consensus       143 ~~~Ig~~v~iG~~~~I~~~v~IG~~s~IgagsvV~kdVp~~si~vg~~~~~~~~~~~r~  201 (201)
T d2oi6a1         143 KTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWRRP  201 (201)
T ss_dssp             CEEECTTCEECTTCEEESSEEECTTCEECTTCEECSCBCTTCEECCCCCCCCCTTCCCC
T ss_pred             ccEeCCcEEEeEeeeEcCCcEECCCCEECCCCEEeeecCCCCEEEecccceEccCcCCc
Confidence            4799999999999999999999999999999999999999998666 999999888764

>d3tdta_ b.81.1.2 (A:) Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD {Mycobacterium bovis [TaxId: 1765]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD
domain: Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD
species: Mycobacterium bovis [TaxId: 1765]

Probab=99.59  E-value=4.9e-15  Score=139.08  Aligned_cols=96  Identities=24%  Similarity=0.382  Sum_probs=86.7

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEE
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKI  333 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~I  333 (388)
                      ...|.-+|+||.|++|++  +.+||..+.||+||.|+.|++||+.-...+.++++|||+|+||++|.|.+++.||++++|
T Consensus       125 ps~VNigA~ig~~~midt--~a~vgs~aqIG~~vhis~g~~igGvlep~~~~p~iIed~~~IGa~s~v~egv~Vg~~avi  202 (274)
T d3tdta_         125 PSYVNIGAYVDEGTMVDT--WATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVI  202 (274)
T ss_dssp             SEEECTTCEECTTCEECT--TEEECTTCEECTTCEECTTCEECCSBTTBCSSCCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred             eeEeccccEEcCCcEEcc--cceecceeEECCCeEECCCcEEEeccccCCCCCcEEecCcEeccCceEecCEEecCceEe
Confidence            345666777888888887  999999999999999999999999877777789999999999999999999999999999


Q ss_pred             CCCCEECCC---------------CCCCcEEEe
Q 047635          334 GAGSVVLKD---------------VPPRTTAVG  351 (388)
Q Consensus       334 GagsVV~~d---------------Vp~~s~VvG  351 (388)
                      |+|++|+++               ||++++|+.
T Consensus       203 ~~gv~i~~~t~i~d~~~g~~~~g~vP~~svvv~  235 (274)
T d3tdta_         203 SMGVYLGQSTRIYDRETGEIHYGRVPAGSVVVS  235 (274)
T ss_dssp             CTTCEECTTCCEEETTTCCEESSEECTTEEEEE
T ss_pred             ccceEEeccccceeccCCcEeccccCCCCEEec
Confidence            999999995               999999874

>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter jejuni [TaxId: 197]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: PglD-like
domain: Acetyltransferase PglD
species: Campylobacter jejuni [TaxId: 197]

Probab=99.55  E-value=4.7e-14  Score=126.66  Aligned_cols=119  Identities=24%  Similarity=0.337  Sum_probs=102.4

Q ss_pred             eeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCE
Q 047635          253 FSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAK  332 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~  332 (388)
                      +...|||++.|++++.|..+.++.|+++++|+++|.|+.+|.|+.+..+..  +++||+++.|++++.+.++++||++|+
T Consensus        73 ~~~~I~p~a~I~~~~~I~~g~g~~I~~~~~I~~~~~Ig~~~~I~~~~~I~~--~~~Ig~~~~i~~~~~i~g~v~Ig~~~~  150 (193)
T d3bswa1          73 IVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEH--ECVIGEFSHVSVGAKCAGNVKIGKNCF  150 (193)
T ss_dssp             BCCEECTTCEECTTSEECTTSCCEECTTCEECTTCEECTTCEECTTCEECT--TCEECTTCEECTTCEECTTCEECTTCE
T ss_pred             cceecCCCcEEeeeeEEccccCceEeeeeeecCCceeeeccccccccccce--eeeccccccccccccccccceeecccc
Confidence            345699999999999998777888888888888888888888877666653  689999999999999999999999999


Q ss_pred             ECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccc
Q 047635          333 IGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTM  374 (388)
Q Consensus       333 IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~  374 (388)
                      ||++++|.+++  .++ .++|..+.+.+..+++..+.+.|++.|
T Consensus       151 IG~~s~I~~~v~Ig~~-~~IgagsvV~~dv~~~~~~~G~PAk~i  193 (193)
T d3bswa1         151 LGINSCVLPNLSLADD-SILGGGATLVKNQDEKGVFVGVPAKRM  193 (193)
T ss_dssp             ECTTCEECTTCEECTT-CEECTTCEECSCBCSCCEECCCCCCCC
T ss_pred             CCceeeEcCCeEECCC-CEECCCCEECcCCCCCcEEEEeCCEEC
Confidence            99999999986  455 467888999998888888889999764

>d1krra_ b.81.1.3 (A:) Galactoside acetyltransferase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Galactoside acetyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.39  E-value=9.9e-13  Score=118.92  Aligned_cols=109  Identities=17%  Similarity=0.261  Sum_probs=82.4

Q ss_pred             EecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE--------------
Q 047635          256 DIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI--------------  321 (388)
Q Consensus       256 ~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I--------------  321 (388)
                      .||+++.|+++++++.|.++.||+++.|+.||+|.++.            .++||++|.||++++|              
T Consensus        56 ~iG~~~~I~p~~~i~~G~nv~IG~~~~I~~~~~I~~~~------------~i~IG~~v~Ig~~v~I~~~~~~~~~~~~~~  123 (200)
T d1krra_          56 TVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDY------------TVTIGDNVLIAPNVTLSVTGHPVHHELRKN  123 (200)
T ss_dssp             BCCSSCEECSCEEESCSTTEEECSSCEECSCEEEECSS------------CEEECSSCEECSSCEEESEECCSSTTTCTT
T ss_pred             cCCCCCEEcCCEEEecCCccEECCccEECceEEEecCC------------CcEeCCCccccceeEEecccccceeccccc
Confidence            38888888888888765566666666666666654332            3577888888888776              


Q ss_pred             ----CCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCcccccc
Q 047635          322 ----LGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDHT  377 (388)
Q Consensus       322 ----lg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~~  377 (388)
                          .++++||++|+||++++|..++  .++ .++|..+.+.+..+..+...+.|++.++..
T Consensus       124 ~~~~~~~v~Igd~v~IG~~~~I~~Gv~IG~~-~vIgagSvV~kdvp~~~iv~G~PArvik~~  184 (200)
T d1krra_         124 GEMYSFPITIGNNVWIGSHVVINPGVTIGDN-SVIGAGSIVTKDIPPNVVAAGVPCRVIREI  184 (200)
T ss_dssp             CCBEECCEEECTTCEECTTCEECTTCEECTT-CEECTTCEECSCBCTTEEEETTTTEEEEEC
T ss_pred             ceeecceEEEccCcccceeeecccccccCCC-cEEeCCCEEeeEcCCCcEEEEeCCEEEEeC
Confidence                3468999999999999999986  555 466888999888888887789999776553

>d1qrea_ b.81.1.5 (A:) gamma-carbonic anhydrase {Archaeon Methanosarcina thermophila [TaxId: 2210]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: gamma-carbonic anhydrase-like
domain: gamma-carbonic anhydrase
species: Archaeon Methanosarcina thermophila [TaxId: 2210]

Probab=99.37  E-value=1.4e-13  Score=125.07  Aligned_cols=108  Identities=14%  Similarity=0.247  Sum_probs=59.2

Q ss_pred             eeeEecCCcEECCceEEcC--CCCcEECCCcEECCCcEEcCC-----------------------CEECCCCccCCC---
Q 047635          253 FSVDIHPGAKIGRGLLFDH--ATGVVVGETAVIGDNVSILHN-----------------------VTLGGTGKMSGD---  304 (388)
Q Consensus       253 ~gV~Ig~~a~IG~gv~I~~--gtgVvIG~~~~IGdnV~Ig~g-----------------------vtIgg~~~i~g~---  304 (388)
                      ..+.||+++.||.++.|..  +..++||+++.|+++|+|..+                       +.||.+..+...   
T Consensus        39 g~V~IG~~~~Igp~~vIrgd~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~IG~~v~IG~~~~i  118 (210)
T d1qrea_          39 GEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQV  118 (210)
T ss_dssp             ESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEECTTCEECTTCEE
T ss_pred             cceEECCCCEEccCeeeecccCCceEEcccceeeeeeEeccceeeccccccccCccccccccccceeecccccccccccc
Confidence            3566777777777777732  346677777777776655322                       222222221111   


Q ss_pred             -CCCEECCCcEEccCCEECCCcEECCCCEECCCCEEC-------CCCCCCcEEEec-CcEEeccCC
Q 047635          305 -RHPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVL-------KDVPPRTTAVGN-PARLIGGKE  361 (388)
Q Consensus       305 -~~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~-------~dVp~~s~VvG~-PArvi~~~~  361 (388)
                       .+++||++|+||+|++|.+ .+||++|+|++++++.       ..||+++++.|. |++.+++..
T Consensus       119 ~g~~~IGd~~~IG~gs~i~~-~~IG~~~vIg~~svv~g~~i~~g~~I~~g~~v~g~~~~~~i~~~~  183 (210)
T d1qrea_         119 HGPAAVGDDTFIGMQAFVFK-SKVGNNCVLEPRSAAIGVTIPDGRYIPAGMVVTSQAEADKLPEVT  183 (210)
T ss_dssp             EEEEEECTTCEECTTCEEEE-EEECTTCEECTTCEEESCEECTTBEECTTCEECSHHHHHTCCBCC
T ss_pred             ccCCcccCCcEeeCCccccc-cccccCcEEecCcEecCcEeCCCcEECCCcEEeCCCcccccccCC
Confidence             1345666666666665553 3566666665555553       235677777764 666665443

>d2jf2a1 b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltransferase {Escherichia coli, gene lpxA [TaxId: 562]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: UDP N-acetylglucosamine acyltransferase
domain: UDP N-acetylglucosamine acyltransferase
species: Escherichia coli, gene lpxA [TaxId: 562]

Probab=99.29  E-value=4.5e-12  Score=118.63  Aligned_cols=70  Identities=14%  Similarity=0.166  Sum_probs=52.1

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      ++.||++|+|++++.+.+.++||++|+||+++.|.+.+  .+++ ++|.-+.+.++.+....+.+.|++.+..
T Consensus       126 ~~~IG~~~~i~~~~~i~g~~~Ig~~v~ig~~~~i~~~v~IG~~a-~igagS~Vtkdvp~~~~~~G~PA~~~~~  197 (262)
T d2jf2a1         126 DCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHV-MVGGCSGVAQDVPPYVIAQGNHATPFGV  197 (262)
T ss_dssp             TCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC-EECSSCEECSBBCTTEEEEEBTEEEEEE
T ss_pred             ccccCCCeeecCccccccceeeCceEEeccCceeccccEeehhc-eeeccceEeecCCcccccCCCCceeeee
Confidence            34555555555566667789999999999999999886  5655 4556788888888777778999976644

>d1j2za_ b.81.1.1 (A:) UDP N-acetylglucosamine acyltransferase {Helicobacter pylori [TaxId: 210]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: UDP N-acetylglucosamine acyltransferase
domain: UDP N-acetylglucosamine acyltransferase
species: Helicobacter pylori [TaxId: 210]

Probab=99.27  E-value=1.1e-11  Score=115.51  Aligned_cols=67  Identities=19%  Similarity=0.254  Sum_probs=50.3

Q ss_pred             CEECCCcEEccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccc
Q 047635          307 PKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTM  374 (388)
Q Consensus       307 ~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~  374 (388)
                      +.||+++.++.++.+.++++||++|+||.+++|.+.+  .++++ +|.-+.+.++.+......+.|++..
T Consensus       122 ~~ig~~~~i~~~~~i~g~v~Ig~~v~IG~~s~I~~gv~IG~~a~-IgagSvV~kdVp~~~i~~G~PA~~~  190 (259)
T d1j2za_         122 CVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAKGCM-IAGKSALGKDVPPYCTVEGNRAFIR  190 (259)
T ss_dssp             CEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCE-ECTTCEECSBBCTTEEEETTBTEEE
T ss_pred             ecccceeeeeccccccccccccccceecceeeeecccEecccee-eeeeeeeccccccceeEEecccccc
Confidence            3444444555555567789999999999999999986  66665 4556888888887777789999753

>d1ocxa_ b.81.1.3 (A:) Maltose O-acetyltransferase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Maltose O-acetyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.27  E-value=1.9e-12  Score=115.30  Aligned_cols=116  Identities=17%  Similarity=0.208  Sum_probs=89.5

Q ss_pred             ceeeeeEecCCcEECCceEEcCCCCcEECC--CcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEE
Q 047635          250 SEVFSVDIHPGAKIGRGLLFDHATGVVVGE--TAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKI  327 (388)
Q Consensus       250 ~~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~--~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~I  327 (388)
                      ...+.+++|.++.||++++|+.  +++|.+  .++||++|.|+++|+|+.        +..+++.+....++.+.++++|
T Consensus        62 ~~p~~~~~G~ni~IG~~~~I~~--~~~I~d~~~I~IG~~~~Ig~~v~I~~--------~~~~~~~~~~~~~~~~~~~v~I  131 (182)
T d1ocxa_          62 EPTFRCDYGYNIFLGNNFFANF--DCVMLDVCPIRIGDNCMLAPGVHIYT--------ATHPIDPVARNSGAELGKPVTI  131 (182)
T ss_dssp             CSCEEESSSTTEEECSSEEECS--SEEEECSSCEEECTTCEECTTCEEEC--------EECCSSHHHHTTTCBEECCEEE
T ss_pred             ECCEEEEeccceeECCccEECC--CcEEecCCeEEECCCeEECcCceEee--------cccccceeeeeccceEcceeEE
Confidence            3356788889999999999987  788854  458889999998888876        3455666666777777788888


Q ss_pred             CCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          328 GDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       328 Gd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      |++|+||++++|..+|  .++ .++|..+.+.++.+......++|++.+++
T Consensus       132 g~~~~iG~~~~I~~Gv~IG~~-~vIgagsvV~kdvp~~~i~~G~PAk~ir~  181 (182)
T d1ocxa_         132 GNNVWIGGRAVINPGVTIGDN-VVVASGAVVTKDVPDNVVVGGNPARIIKK  181 (182)
T ss_dssp             CTTCEECTTCEECTTCEECTT-CEECTTCEECSCBCSSEEEETTTTEEEEE
T ss_pred             CceEeeCceeeccCcEEECCC-CEECCCCEEccCCCCCeEEEeeCCEEEee
Confidence            8888888888888876  454 45677788888877777778999987653

>d1qrea_ b.81.1.5 (A:) gamma-carbonic anhydrase {Archaeon Methanosarcina thermophila [TaxId: 2210]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: gamma-carbonic anhydrase-like
domain: gamma-carbonic anhydrase
species: Archaeon Methanosarcina thermophila [TaxId: 2210]

Probab=99.19  E-value=1.2e-11  Score=111.95  Aligned_cols=37  Identities=30%  Similarity=0.431  Sum_probs=34.7

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCC
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKD  342 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~d  342 (388)
                      .++||++|+||.++.|.++++||++|+||+|++|.+.
T Consensus       103 ~~~IG~~v~IG~~~~i~g~~~IGd~~~IG~gs~i~~~  139 (210)
T d1qrea_         103 AVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFKS  139 (210)
T ss_dssp             SEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEE
T ss_pred             ceeeccccccccccccccCCcccCCcEeeCCcccccc
Confidence            4789999999999999999999999999999999865

>d1fxja1 b.81.1.4 (A:252-329) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.17  E-value=1.7e-11  Score=94.69  Aligned_cols=69  Identities=19%  Similarity=0.348  Sum_probs=54.8

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEECCCCEEC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIGDGAKIG  334 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IGd~v~IG  334 (388)
                      ++|...++||+++.|++  +++|+.+++||+||.|+++|.|.         +++||+++.|++++.|. +++||++|.||
T Consensus         9 ~~I~g~v~IG~~~~I~~--~~~i~g~~~IG~~v~Ig~~~~i~---------~~~Ig~~~~I~~~s~i~-~~~Ig~~~~IG   76 (78)
T d1fxja1           9 FDLRGTLTHGRDVEIDT--NVIIEGNVTLGHRVKIGTGCVIK---------NSVIGDDCEISPYTVVE-DANLAAACTIG   76 (78)
T ss_dssp             EEEEEEEEECSSCEECT--TEEEEEEEEECTTCEECTTCEEE---------SCEECTTCEECTTCEEE-SEEECTTCEES
T ss_pred             EEEeccEEECCCCEECC--ccEEeCCcEECCCCEECCCeEEe---------cCEECCCCEEcCCcEEE-CCEECCCCEEC
Confidence            45666666777777766  66777777888888888888885         47999999999999885 69999999998


Q ss_pred             C
Q 047635          335 A  335 (388)
Q Consensus       335 a  335 (388)
                      +
T Consensus        77 P   77 (78)
T d1fxja1          77 P   77 (78)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1g97a1 b.81.1.4 (A:252-447) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.08  E-value=5.4e-10  Score=97.55  Aligned_cols=53  Identities=13%  Similarity=0.108  Sum_probs=42.2

Q ss_pred             CCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          323 GNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       323 g~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                      +++.||++|+||.+++|.+.+  ..++ ++|.-+.+.++.+......+.|++..+.
T Consensus       141 ~~~~Ig~~~~iG~~~~I~~gv~IG~~s-~IgagsvVtkdvp~~~i~~G~Pak~~k~  195 (196)
T d1g97a1         141 YKTVIGNNVFVGSNSTIIAPVELGDNS-LVGAGSTITKDVPADAIAIGRGRQINKD  195 (196)
T ss_dssp             CCEEECTTCEECTTCEEESSCEECTTC-EECTTCEECSCBCTTCEECCCCCCCCCC
T ss_pred             eeeEEecCCEEeeeeEEcCCcEECCCC-EECCCCEECcCcCCCCEEEecCCEEecC
Confidence            457799999999999999986  6665 5666788888877777778999877653

>d1xhda_ b.81.1.5 (A:) Putative acetyltransferase/acyltransferase BC4754 {Bacillus cereus [TaxId: 1396]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: gamma-carbonic anhydrase-like
domain: Putative acetyltransferase/acyltransferase BC4754
species: Bacillus cereus [TaxId: 1396]

Probab=98.96  E-value=9.4e-10  Score=95.59  Aligned_cols=118  Identities=19%  Similarity=0.173  Sum_probs=76.3

Q ss_pred             eEecCCcEECCceEEcCCCCcEECCCcEECCCcEEc---------CCCEECCCCccCC--CCCCEECCCcEEccCCEECC
Q 047635          255 VDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSIL---------HNVTLGGTGKMSG--DRHPKIGNGVLVGAGTCILG  323 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig---------~gvtIgg~~~i~g--~~~~~IGd~V~IGaga~Ilg  323 (388)
                      +.||++++|++++.|..  ++.||++|.||.+|+|+         .++.++.......  ..+++||+++.++.++.+ +
T Consensus        13 ~~Ig~~~~I~~~a~I~~--~v~IG~~~~Ig~~~~I~~~~~~i~IG~~~~i~~~~~~~~~~~~~~~ig~~~~~~~~~~~-~   89 (172)
T d1xhda_          13 PKIASSAFIADYVTITG--DVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVIL-H   89 (172)
T ss_dssp             CEECTTCEECTTCEEEE--EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEE-E
T ss_pred             CEECCCcEECCCCEEeC--CEEECCCcEecCCcccccccccccccceeeeeeeceeccCCcCCeeeeeeeeeeeeecc-c
Confidence            45777777777777765  67777777777776553         3344443332221  234788999988888876 5


Q ss_pred             CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEec--cCCCCccccCCCCccccc
Q 047635          324 NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIG--GKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~--~~~~~~~~~~~p~~~~~~  376 (388)
                      +++||++++||++++|..++  .+++ ++|.-+.+..  ..+......+.|++.++.
T Consensus        90 ~~~i~~~~~ig~~~~i~~gv~IG~~~-~IgagsvV~~~~~i~~~~v~~G~Pak~i~~  145 (172)
T d1xhda_          90 SCHIKKDALIGMGSIILDGAEIGEGA-FIGAGSLVSQGKKIPPNTLAFGRPAKVIRE  145 (172)
T ss_dssp             SCEECTTCEECTTCEECTTCEECTTC-EECTTCEECTTCEECTTEEEEETTEEEEEE
T ss_pred             ccccccceEEecccEeeCCcEEcCcc-cccceEEEeeCeEECCCeEEEecCcEEECC
Confidence            77888888888888888874  5554 4444555553  234444556888866543

>d1mr7a_ b.81.1.3 (A:) Xenobiotic acetyltransferase {Enterococcus faecium, VAT(D) [TaxId: 1352]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Xenobiotic acetyltransferase
species: Enterococcus faecium, VAT(D) [TaxId: 1352]

Probab=98.96  E-value=1.5e-10  Score=103.99  Aligned_cols=121  Identities=13%  Similarity=0.171  Sum_probs=86.4

Q ss_pred             eEecCCcEECCceEEcCC-----CCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEc-------------
Q 047635          255 VDIHPGAKIGRGLLFDHA-----TGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVG-------------  316 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~g-----tgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IG-------------  316 (388)
                      +.++++++||++++|...     ...+++..+.|+++|.||.+|+|+.+..+.......+++++.+.             
T Consensus        24 v~i~~nV~IG~~~~I~~~~~~~~~~~~i~~~~~I~~~v~IG~~~~Ig~gv~I~~~~~~~i~d~~~~~~~~~~~~~~~~~~  103 (203)
T d1mr7a_          24 LEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMP  103 (203)
T ss_dssp             HTTSTTEEECTTCEEECSSSCCGGGGEESCCGGGCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCC
T ss_pred             eEECCCEEECCCcEEcCCcCcccCceEEeeeCEECCccEECCCeEECCCCcEeeecCcEeccCceEeeeeecccccCccc
Confidence            345666666666666531     25678888888888888888888887666444445566665442             


Q ss_pred             --cCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          317 --AGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       317 --aga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                        .++.+.++|+||++|+||++|+|..++  .+++ ++|.-+.+.+..+....+.++|++.+++
T Consensus       104 ~~~~~~i~g~v~IGd~v~IG~~~~I~~gv~IG~~~-~IgagSvV~kdv~~~~i~~G~PAk~ik~  166 (203)
T d1mr7a_         104 KLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGA-IVAANSVVVKDIAPYMLAGGNPANEIKQ  166 (203)
T ss_dssp             CGGGSCCCCCEEECSSCEECTTCEECTTCEECTTC-EECTTCEECSCBCTTEEEEETTEEEEEE
T ss_pred             ccccccCccCeEECCEEEECCceeEEeEEEEcCCC-EEecCeEEeeeCCCCEEEEEeCCEEEec
Confidence              233456789999999999999999886  5554 5666788888777777778999987764

>d3tdta_ b.81.1.2 (A:) Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD {Mycobacterium bovis [TaxId: 1765]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD
domain: Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD
species: Mycobacterium bovis [TaxId: 1765]

Probab=98.91  E-value=3.4e-09  Score=98.92  Aligned_cols=84  Identities=27%  Similarity=0.302  Sum_probs=67.3

Q ss_pred             cceeeeeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCC----
Q 047635          249 VSEVFSVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGN----  324 (388)
Q Consensus       249 ~~~~~gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~----  324 (388)
                      +....+..+-.+++|++|+.+.   +.+|.-++.||++|+|.++++||.        .+.||++|.|++|+.|.|.    
T Consensus       103 ~RvvPga~VR~GayI~~~vVlm---ps~VNigA~ig~~~midt~a~vgs--------~aqIG~~vhis~g~~igGvlep~  171 (274)
T d3tdta_         103 FRVVPPATVRQGAFIARNTVLM---PSYVNIGAYVDEGTMVDTWATVGS--------CAQIGKNVHLSGGVGIGGVLEPL  171 (274)
T ss_dssp             CEECTTCEEBTTCEECTTCEEC---SEEECTTCEECTTCEECTTEEECT--------TCEECTTCEECTTCEECCSBTTB
T ss_pred             EEeCCCceeccCcEECCCcEEe---eeEeccccEEcCCcEEcccceecc--------eeEECCCeEECCCcEEEeccccC
Confidence            3344455566666666666554   457777889999999999999986        5799999999999999874    


Q ss_pred             ----cEECCCCEECCCCEECCCC
Q 047635          325 ----IKIGDGAKIGAGSVVLKDV  343 (388)
Q Consensus       325 ----V~IGd~v~IGagsVV~~dV  343 (388)
                          ++|||+|+||++|.|..+|
T Consensus       172 ~~~p~iIed~~~IGa~s~v~egv  194 (274)
T d3tdta_         172 QANPTIIEDNCFIGARSEVVEGV  194 (274)
T ss_dssp             CSSCCEECTTCEECTTCEECTTC
T ss_pred             CCCCcEEecCcEeccCceEecCE
Confidence                5699999999999999875

>d1v3wa_ b.81.1.5 (A:) Ferripyochelin binding protein {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: gamma-carbonic anhydrase-like
domain: Ferripyochelin binding protein
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.86  E-value=1.6e-09  Score=94.04  Aligned_cols=112  Identities=19%  Similarity=0.202  Sum_probs=82.0

Q ss_pred             ecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEE---------------
Q 047635          257 IHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCI---------------  321 (388)
Q Consensus       257 Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~I---------------  321 (388)
                      .|.+.+||++++|++  +++|+.+++||++|.|+++|.|++..     ..++||+++.++.++.+               
T Consensus         7 ~g~~~~I~~~~~I~~--~a~I~g~v~IG~~~~Ig~~~~I~~~~-----~~v~i~~~~~i~~~~~~~~~~~~~~~~~~~~~   79 (173)
T d1v3wa_           7 NGKKPRIHPSAFVDE--NAVVIGDVVLEEKTSVWPSAVLRGDI-----EQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVT   79 (173)
T ss_dssp             TTBCCEECTTCEECT--TSEEEEEEEECTTCEECTTCEEEEEE-----EEEEECTTCEECTTCEEECBTTBCEEECSSCE
T ss_pred             CCCCCEECcCcEECC--CCEEeCceEECCCCEECCCccccccc-----cccccccccccccccccccccCCCcccCccee
Confidence            578889999999998  88999999999999999999997531     12455555555555543               


Q ss_pred             ------CCCcEECCCCEECCCCEECCCC-CCCcEEEecCcEEecc--CCCCccccCCCCcccc
Q 047635          322 ------LGNIKIGDGAKIGAGSVVLKDV-PPRTTAVGNPARLIGG--KENPFMLDKIPSFTMD  375 (388)
Q Consensus       322 ------lg~V~IGd~v~IGagsVV~~dV-p~~s~VvG~PArvi~~--~~~~~~~~~~p~~~~~  375 (388)
                            .+++.||++|+||++++|..++ -....++|.-+.+.+.  .+......++|++.++
T Consensus        80 ~~~~~~~~~~~Ig~~~~ig~~~~i~~gv~Ig~~~vIgagsvV~~~~~i~~~~iv~G~Pak~i~  142 (173)
T d1v3wa_          80 IGHNAMVHGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVPPNKEIPDYSLVLGVPGKVVR  142 (173)
T ss_dssp             ECTTCEEESCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEECTTEEEEETTEEEEE
T ss_pred             eeeeeeeeeeecCCcccccceeeecCCEEEcceeEEcCCcEEeCCeEeCCCCEEcCCCceEec
Confidence                  3368899999999999999885 2334566777777643  3455555788986543

>d1fxja1 b.81.1.4 (A:252-329) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.83  E-value=7.2e-09  Score=79.55  Aligned_cols=63  Identities=19%  Similarity=0.314  Sum_probs=29.2

Q ss_pred             eeEecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCCCCCEECCCcEEccCCEECCCcEEC
Q 047635          254 SVDIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGDRHPKIGNGVLVGAGTCILGNIKIG  328 (388)
Q Consensus       254 gV~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~~~~~IGd~V~IGaga~Ilg~V~IG  328 (388)
                      .+.||+++.|++++.|..  +++||++++||++|.|. +++|+.        +++|+++++|. +++|..+++||
T Consensus        14 ~v~IG~~~~I~~~~~i~g--~~~IG~~v~Ig~~~~i~-~~~Ig~--------~~~I~~~s~i~-~~~Ig~~~~IG   76 (78)
T d1fxja1          14 TLTHGRDVEIDTNVIIEG--NVTLGHRVKIGTGCVIK-NSVIGD--------DCEISPYTVVE-DANLAAACTIG   76 (78)
T ss_dssp             EEEECSSCEECTTEEEEE--EEEECTTCEECTTCEEE-SCEECT--------TCEECTTCEEE-SEEECTTCEES
T ss_pred             cEEECCCCEECCccEEeC--CcEECCCCEECCCeEEe-cCEECC--------CCEEcCCcEEE-CCEECCCCEEC
Confidence            344555555555555444  44455555555554443 344443        34444444442 34444444444

>d1yp2a1 b.81.1.4 (A:317-451) Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain {Potato (Solanum tuberosum) [TaxId: 4113]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain
species: Potato (Solanum tuberosum) [TaxId: 4113]

Probab=98.68  E-value=1.5e-08  Score=84.77  Aligned_cols=80  Identities=20%  Similarity=0.206  Sum_probs=40.1

Q ss_pred             EecCCcEECCceEEcCCCCcEECCCcEECCCcEEcCCCEECCCCccCCC----CCCEECCCcEEccCCEECCCcEECCCC
Q 047635          256 DIHPGAKIGRGLLFDHATGVVVGETAVIGDNVSILHNVTLGGTGKMSGD----RHPKIGNGVLVGAGTCILGNIKIGDGA  331 (388)
Q Consensus       256 ~Ig~~a~IG~gv~I~~gtgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g~----~~~~IGd~V~IGaga~Ilg~V~IGd~v  331 (388)
                      .|++++.|+. ..+.   +.+||+++.||+++.|.+++.+++.......    ....+++++.||.+|.|. ++.||++|
T Consensus        16 ~Ig~g~~I~~-~~i~---~s~IG~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~i~~~v~Ig~~~~I~-~~iIg~~~   90 (135)
T d1yp2a1          16 VIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIK-RAIIDKNA   90 (135)
T ss_dssp             EECTTCEEEE-EEEE---SCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEE-SEEECTTC
T ss_pred             EECCCCEEeC-CEEe---ccccCCcEEECCCCEEEcCEEECCCEEeCCcEEEecceEcCCCCEECcceEec-cceecCCC
Confidence            3555555532 2232   4677777777777777766665543222110    012344444555555442 44455555


Q ss_pred             EECCCCEEC
Q 047635          332 KIGAGSVVL  340 (388)
Q Consensus       332 ~IGagsVV~  340 (388)
                      .||+|+++.
T Consensus        91 ~IG~g~~i~   99 (135)
T d1yp2a1          91 RIGDNVKII   99 (135)
T ss_dssp             EECTTCEEC
T ss_pred             EECCCcEEC
Confidence            555554444

>d1xata_ b.81.1.3 (A:) Xenobiotic acetyltransferase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: Galactoside acetyltransferase-like
domain: Xenobiotic acetyltransferase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.64  E-value=3.6e-08  Score=88.77  Aligned_cols=120  Identities=18%  Similarity=0.160  Sum_probs=72.6

Q ss_pred             EecCCcEECCceEEcCC--------------CCcEECCCcEECCCcEEcCCCEECCCCccCC-CCCCEECCCcE------
Q 047635          256 DIHPGAKIGRGLLFDHA--------------TGVVVGETAVIGDNVSILHNVTLGGTGKMSG-DRHPKIGNGVL------  314 (388)
Q Consensus       256 ~Ig~~a~IG~gv~I~~g--------------tgVvIG~~~~IGdnV~Ig~gvtIgg~~~i~g-~~~~~IGd~V~------  314 (388)
                      .++|++.||++++++..              ....+.+.+.||++|.|+.+|+|...+.... ...+.+..++.      
T Consensus        16 I~~pNi~IGd~t~i~~~~~~~~~~~~~~~~~~~~~~~~~v~IG~~~~I~~g~~I~~~g~~~~~~~~~~~~~~~~~~~~~~   95 (208)
T d1xata_          16 VSNPNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHEEPA   95 (208)
T ss_dssp             CCCTTEEECTTCEECCTTTCCCGGGGEETCCSSCSSSCCEEECSSCEECTTCEEECSTTTTCCTTSSCCSCGGGCCSCGG
T ss_pred             cCCCCcEECCCeeECCcccCCccccceEEecCCCCCcCeeEECCCCEECCCCEEeccCCCcccccceeeccccccccccc
Confidence            46788888887777531              1233445577788888888777633211110 00111111111      


Q ss_pred             ---EccCCEECCCcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccccCCCCccccc
Q 047635          315 ---VGAGTCILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFMLDKIPSFTMDH  376 (388)
Q Consensus       315 ---IGaga~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~~~~p~~~~~~  376 (388)
                         +..+..+.++++||++|+||++|+|...+  .++ .++|.-+.+.++.+....+.+.|++.++.
T Consensus        96 ~~~~~~~~~~~g~v~Igd~v~IG~~s~I~~gv~IG~~-~vIgagSvVtkdvp~~si~~G~PAk~ik~  161 (208)
T d1xata_          96 FAGAVNGYQPAGDTLIGHEVWIGTEAMFMPGVRVGHG-AIIGSRALVTGDVEPYAIVGGNPARTIRK  161 (208)
T ss_dssp             GGGCCCCCCCCCCEEECTTCEECTTCEECTTCEECTT-CEECTTCEECSCBCTTEEEETTTTEEEEE
T ss_pred             ccccccCccccCCEEEcCCeEECccccccCCeEeCCC-CEEeCceEEeecCCcCcEEEecCCEEEec
Confidence               12233345678888888888888888775  444 45666788888888777778999976654

>d1yp2a1 b.81.1.4 (A:317-451) Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain {Potato (Solanum tuberosum) [TaxId: 4113]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain
species: Potato (Solanum tuberosum) [TaxId: 4113]

Probab=98.62  E-value=7e-08  Score=80.51  Aligned_cols=17  Identities=12%  Similarity=0.196  Sum_probs=9.5

Q ss_pred             eEecCCcEECCceEEcC
Q 047635          255 VDIHPGAKIGRGLLFDH  271 (388)
Q Consensus       255 V~Ig~~a~IG~gv~I~~  271 (388)
                      ..||+++.||+++.|.+
T Consensus        31 s~IG~~~~Ig~~~~I~~   47 (135)
T d1yp2a1          31 SVVGLRSCISEGAIIED   47 (135)
T ss_dssp             CEECTTCEECTTCEEES
T ss_pred             cccCCcEEECCCCEEEc
Confidence            34555556666555554

>d2f9ca1 b.81.1.7 (A:3-322) Hypothetical protein YdcK {Salmonella enterica [TaxId: 28901]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: YdcK-like
domain: Hypothetical protein YdcK
species: Salmonella enterica [TaxId: 28901]

Probab=98.30  E-value=1.7e-07  Score=88.94  Aligned_cols=47  Identities=13%  Similarity=-0.004  Sum_probs=30.9

Q ss_pred             CCEECCCcEEccCCEECCCcEECCCCEECCCCEECCCCCCCcEEEec
Q 047635          306 HPKIGNGVLVGAGTCILGNIKIGDGAKIGAGSVVLKDVPPRTTAVGN  352 (388)
Q Consensus       306 ~~~IGd~V~IGaga~Ilg~V~IGd~v~IGagsVV~~dVp~~s~VvG~  352 (388)
                      +++|++++.|+.++.|.+++.|++++.|++.+....+++...++.|.
T Consensus       266 ~~~I~~~a~I~g~~~I~~~v~i~~~a~v~a~~~~~~~l~g~~~i~G~  312 (320)
T d2f9ca1         266 RVLIEGHACIQGEILIERQVEISGRAAVIAFDDNTIHLRGPKVINGE  312 (320)
T ss_dssp             EEEECSSCEEESSEEECSEEEECSSCEEECCSSCCEEECSSEEECSS
T ss_pred             ceEECCCcEEcccCEEeCCCEECCCeEEEEecCCeEEccCCcEEcCc
Confidence            45666666666677777777777777777666666666666555554

>d2oi6a1 b.81.1.4 (A:252-452) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: GlmU C-terminal domain-like
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.18  E-value=1.4e-06  Score=76.03  Aligned_cols=50  Identities=12%  Similarity=0.236  Sum_probs=35.4

Q ss_pred             CcEECCCCEECCCCEECCCC--CCCcEEEecCcEEeccCCCCccc-cCCCCccc
Q 047635          324 NIKIGDGAKIGAGSVVLKDV--PPRTTAVGNPARLIGGKENPFML-DKIPSFTM  374 (388)
Q Consensus       324 ~V~IGd~v~IGagsVV~~dV--p~~s~VvG~PArvi~~~~~~~~~-~~~p~~~~  374 (388)
                      ++.||++|+||.++.|.+.+  .+++ ++|..+.+.+..+....+ .+.|++..
T Consensus       143 ~~~Ig~~v~iG~~~~I~~~v~IG~~s-~IgagsvV~kdVp~~si~vg~~~~~~~  195 (201)
T d2oi6a1         143 KTIIGDDVFVGSDTQLVAPVTVGKGA-TIAAGTTVTRNVGENALAISRVPQTQK  195 (201)
T ss_dssp             CEEECTTCEECTTCEEESSEEECTTC-EECTTCEECSCBCTTCEECCCCCCCCC
T ss_pred             ccEeCCcEEEeEeeeEcCCcEECCCC-EECCCCEEeeecCCCCEEEecccceEc
Confidence            57899999999999999885  5655 445567777776655543 44665444

>d2f9ca1 b.81.1.7 (A:3-322) Hypothetical protein YdcK {Salmonella enterica [TaxId: 28901]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: YdcK-like
domain: Hypothetical protein YdcK
species: Salmonella enterica [TaxId: 28901]

Probab=97.92  E-value=6.1e-06  Score=77.82  Aligned_cols=46  Identities=20%  Similarity=0.265  Sum_probs=29.1

Q ss_pred             CCEECCCcEEccCC-EECCCcEECCCCEECCCCEECCCC--CCCcEEEe
Q 047635          306 HPKIGNGVLVGAGT-CILGNIKIGDGAKIGAGSVVLKDV--PPRTTAVG  351 (388)
Q Consensus       306 ~~~IGd~V~IGaga-~Ilg~V~IGd~v~IGagsVV~~dV--p~~s~VvG  351 (388)
                      ++.||+++.|+.++ .|.++++|++++.|+.++.|..++  .+++++.+
T Consensus       247 ~v~Ig~~a~i~G~~v~i~~~~~I~~~a~I~g~~~I~~~v~i~~~a~v~a  295 (320)
T d2f9ca1         247 HVLVGGHAEVRGGPILLDDRVLIEGHACIQGEILIERQVEISGRAAVIA  295 (320)
T ss_dssp             EEEECSSCEEESSSEEECSEEEECSSCEEESSEEECSEEEECSSCEEEC
T ss_pred             ceEECCCeEEeCCeeEECCceEECCCcEEcccCEEeCCCEECCCeEEEE
Confidence            46666666666654 345557777777777777777663  55555543